Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031055.01.T01 | XP_013451153.2 | 85.669 | 628 | 46 | 2 | 1 | 628 | 1 | 584 | 0 | 1058 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031055.01.T01 | Q9LVL5 | 53.56 | 618 | 222 | 10 | 19 | 630 | 9 | 567 | 0 | 600 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031055.01.T01 | A0A396HCB4 | 85.669 | 628 | 46 | 2 | 1 | 628 | 1 | 584 | 0.0 | 1058 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004079.01 | MsG0680031055.01 | 0.816682 | 4.877230e-52 | 3.478916e-49 |
| MsG0180004110.01 | MsG0680031055.01 | 0.858596 | 7.392389e-63 | 1.896584e-59 |
| MsG0180004111.01 | MsG0680031055.01 | 0.829190 | 5.911722e-55 | 6.007185e-52 |
| MsG0180004752.01 | MsG0680031055.01 | 0.800182 | 1.625304e-48 | 7.518627e-46 |
| MsG0180004770.01 | MsG0680031055.01 | 0.850367 | 1.777269e-60 | 3.473260e-57 |
| MsG0180004867.01 | MsG0680031055.01 | 0.887672 | 1.162051e-72 | 8.724498e-69 |
| MsG0180006012.01 | MsG0680031055.01 | 0.801447 | 8.963905e-49 | 4.281857e-46 |
| MsG0680031046.01 | MsG0680031055.01 | 0.816055 | 6.733938e-52 | 4.722150e-49 |
| MsG0680031055.01 | MsG0680035741.01 | 0.800128 | 1.666263e-48 | 7.697831e-46 |
| MsG0680031055.01 | MsG0680035777.01 | 0.811839 | 5.727811e-51 | 3.583265e-48 |
| MsG0680031055.01 | MsG0780036514.01 | 0.802635 | 5.108139e-49 | 2.514806e-46 |
| MsG0680031055.01 | MsG0780038123.01 | 0.803527 | 3.340354e-49 | 1.682563e-46 |
| MsG0680031055.01 | MsG0780040143.01 | 0.803703 | 3.072110e-49 | 1.554299e-46 |
| MsG0680031055.01 | MsG0780040144.01 | 0.803676 | 3.111479e-49 | 1.573137e-46 |
| MsG0680031055.01 | MsG0880041985.01 | 0.810562 | 1.083726e-50 | 6.554128e-48 |
| MsG0680031055.01 | MsG0880043094.01 | 0.840229 | 9.862085e-58 | 1.395800e-54 |
| MsG0680031055.01 | MsG0880043744.01 | 0.808627 | 2.821847e-50 | 1.621371e-47 |
| MsG0680031055.01 | MsG0880046251.01 | -0.807440 | 5.050351e-50 | 2.813076e-47 |
| MsG0480022760.01 | MsG0680031055.01 | 0.805482 | 1.307089e-49 | 6.922909e-47 |
| MsG0580024938.01 | MsG0680031055.01 | 0.807442 | 5.044877e-50 | 2.810195e-47 |
| MsG0580024999.01 | MsG0680031055.01 | 0.804744 | 1.865081e-49 | 9.693376e-47 |
| MsG0480018333.01 | MsG0680031055.01 | 0.803719 | 3.048156e-49 | 1.542843e-46 |
| MsG0580029583.01 | MsG0680031055.01 | 0.808267 | 3.368547e-50 | 1.917522e-47 |
| MsG0280006475.01 | MsG0680031055.01 | -0.829347 | 5.416432e-55 | 5.529502e-52 |
| MsG0280006974.01 | MsG0680031055.01 | 0.813594 | 2.365151e-51 | 1.551134e-48 |
| MsG0280007253.01 | MsG0680031055.01 | 0.814450 | 1.531006e-51 | 1.027638e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0580024490.01 | MsG0680031055.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031055.01.T01 | MTR_6g016260 | 84.833 | 600 | 47 | 2 | 29 | 628 | 6 | 561 | 0.0 | 995 |
| MsG0680031055.01.T01 | MTR_5g075220 | 62.158 | 621 | 166 | 5 | 14 | 623 | 12 | 574 | 0.0 | 756 |
| MsG0680031055.01.T01 | MTR_7g072860 | 45.498 | 633 | 269 | 12 | 14 | 620 | 13 | 595 | 2.61e-172 | 504 |
| MsG0680031055.01.T01 | MTR_7g072640 | 45.498 | 633 | 269 | 12 | 14 | 620 | 13 | 595 | 2.61e-172 | 504 |
| MsG0680031055.01.T01 | MTR_4g028830 | 47.766 | 649 | 254 | 11 | 13 | 620 | 8 | 612 | 9.41e-171 | 501 |
| MsG0680031055.01.T01 | MTR_7g114680 | 45.956 | 544 | 196 | 10 | 19 | 519 | 14 | 502 | 2.94e-149 | 450 |
| MsG0680031055.01.T01 | MTR_1g081330 | 50.641 | 468 | 142 | 6 | 19 | 442 | 14 | 436 | 1.00e-147 | 446 |
| MsG0680031055.01.T01 | MTR_1g103850 | 49.784 | 462 | 146 | 6 | 19 | 441 | 14 | 428 | 1.47e-145 | 439 |
| MsG0680031055.01.T01 | MTR_7g114680 | 45.849 | 530 | 189 | 10 | 33 | 519 | 14 | 488 | 1.01e-142 | 432 |
| MsG0680031055.01.T01 | MTR_3g076650 | 50.108 | 465 | 177 | 6 | 12 | 466 | 9 | 428 | 7.79e-137 | 413 |
| MsG0680031055.01.T01 | MTR_3g080960 | 47.598 | 458 | 160 | 6 | 20 | 442 | 11 | 423 | 3.10e-123 | 379 |
| MsG0680031055.01.T01 | MTR_3g095680 | 46.035 | 454 | 157 | 7 | 20 | 429 | 24 | 433 | 2.07e-122 | 378 |
| MsG0680031055.01.T01 | MTR_3g095680 | 46.035 | 454 | 157 | 7 | 20 | 429 | 56 | 465 | 1.00e-121 | 377 |
| MsG0680031055.01.T01 | MTR_8g093090 | 42.398 | 467 | 181 | 5 | 20 | 442 | 24 | 446 | 1.08e-120 | 373 |
| MsG0680031055.01.T01 | MTR_8g093090 | 42.398 | 467 | 181 | 5 | 20 | 442 | 42 | 464 | 2.00e-120 | 372 |
| MsG0680031055.01.T01 | MTR_8g027265 | 44.968 | 467 | 162 | 7 | 16 | 441 | 25 | 437 | 2.54e-117 | 365 |
| MsG0680031055.01.T01 | MTR_1g081330 | 47.980 | 396 | 117 | 6 | 91 | 442 | 1 | 351 | 9.07e-110 | 345 |
| MsG0680031055.01.T01 | MTR_3g056010 | 52.396 | 313 | 106 | 1 | 18 | 330 | 15 | 284 | 1.33e-109 | 332 |
| MsG0680031055.01.T01 | MTR_5g094390 | 51.438 | 313 | 109 | 1 | 18 | 330 | 16 | 285 | 1.52e-109 | 333 |
| MsG0680031055.01.T01 | MTR_3g056025 | 52.396 | 313 | 106 | 1 | 18 | 330 | 15 | 284 | 1.77e-109 | 332 |
| MsG0680031055.01.T01 | MTR_7g029020 | 50.155 | 323 | 118 | 1 | 8 | 330 | 5 | 284 | 2.73e-106 | 324 |
| MsG0680031055.01.T01 | MTR_3g099940 | 51.438 | 313 | 108 | 2 | 19 | 330 | 16 | 285 | 2.25e-105 | 322 |
| MsG0680031055.01.T01 | MTR_5g097530 | 48.348 | 333 | 125 | 3 | 9 | 338 | 4 | 292 | 1.49e-102 | 314 |
| MsG0680031055.01.T01 | MTR_8g093090 | 40.441 | 408 | 155 | 5 | 79 | 442 | 1 | 364 | 2.39e-94 | 301 |
| MsG0680031055.01.T01 | MTR_0283s0050 | 48.355 | 304 | 113 | 2 | 9 | 312 | 4 | 263 | 4.59e-94 | 291 |
| MsG0680031055.01.T01 | MTR_8g093090 | 37.681 | 345 | 127 | 5 | 142 | 442 | 2 | 302 | 1.48e-63 | 218 |
| MsG0680031055.01.T01 | MTR_3g095680 | 40.964 | 332 | 108 | 7 | 142 | 429 | 2 | 289 | 1.52e-63 | 219 |
| MsG0680031055.01.T01 | MTR_5g094390 | 58.065 | 155 | 65 | 0 | 18 | 172 | 16 | 170 | 1.34e-58 | 196 |
| MsG0680031055.01.T01 | MTR_3g062420 | 57.971 | 138 | 30 | 3 | 144 | 281 | 1952 | 2061 | 1.08e-36 | 148 |
| MsG0680031055.01.T01 | MTR_1g100250 | 31.935 | 310 | 158 | 12 | 25 | 330 | 407 | 667 | 2.49e-33 | 137 |
| MsG0680031055.01.T01 | MTR_8g098425 | 30.341 | 323 | 168 | 12 | 14 | 332 | 397 | 666 | 1.88e-31 | 131 |
| MsG0680031055.01.T01 | MTR_4g094415 | 30.000 | 330 | 169 | 13 | 10 | 330 | 141 | 417 | 1.93e-29 | 123 |
| MsG0680031055.01.T01 | MTR_5g059940 | 30.351 | 313 | 153 | 15 | 26 | 330 | 123 | 378 | 1.08e-27 | 116 |
| MsG0680031055.01.T01 | MTR_5g060350 | 30.351 | 313 | 153 | 15 | 26 | 330 | 319 | 574 | 1.55e-27 | 118 |
| MsG0680031055.01.T01 | MTR_5g059880 | 30.671 | 313 | 152 | 15 | 26 | 330 | 190 | 445 | 2.80e-27 | 115 |
| MsG0680031055.01.T01 | MTR_3g096230 | 27.523 | 327 | 183 | 11 | 20 | 341 | 234 | 511 | 3.67e-27 | 116 |
| MsG0680031055.01.T01 | MTR_3g096230 | 27.523 | 327 | 183 | 11 | 20 | 341 | 234 | 511 | 5.73e-27 | 116 |
| MsG0680031055.01.T01 | MTR_5g059910 | 29.841 | 315 | 152 | 15 | 26 | 330 | 129 | 384 | 1.57e-26 | 112 |
| MsG0680031055.01.T01 | MTR_8g093730 | 26.885 | 305 | 170 | 10 | 30 | 330 | 300 | 555 | 1.00e-24 | 109 |
| MsG0680031055.01.T01 | MTR_3g073250 | 28.623 | 276 | 135 | 11 | 62 | 330 | 303 | 523 | 1.66e-23 | 105 |
| MsG0680031055.01.T01 | MTR_4g094415 | 28.622 | 283 | 143 | 9 | 10 | 284 | 141 | 372 | 3.74e-22 | 99.8 |
| MsG0680031055.01.T01 | MTR_2g078740 | 28.383 | 303 | 158 | 13 | 33 | 330 | 19 | 267 | 4.30e-21 | 98.6 |
| MsG0680031055.01.T01 | MTR_2g078740 | 28.383 | 303 | 158 | 13 | 33 | 330 | 19 | 267 | 4.34e-21 | 98.6 |
| MsG0680031055.01.T01 | MTR_2g078740 | 28.383 | 303 | 158 | 13 | 33 | 330 | 19 | 267 | 4.62e-21 | 98.6 |
| MsG0680031055.01.T01 | MTR_4g075410 | 29.221 | 308 | 155 | 11 | 31 | 330 | 22 | 274 | 1.78e-20 | 97.1 |
| MsG0680031055.01.T01 | MTR_4g075410 | 29.221 | 308 | 155 | 11 | 31 | 330 | 22 | 274 | 2.03e-20 | 97.1 |
| MsG0680031055.01.T01 | MTR_4g074875 | 28.896 | 308 | 156 | 11 | 31 | 330 | 22 | 274 | 3.70e-20 | 96.3 |
| MsG0680031055.01.T01 | MTR_4g074875 | 28.896 | 308 | 156 | 11 | 31 | 330 | 22 | 274 | 3.86e-20 | 96.3 |
| MsG0680031055.01.T01 | MTR_3g101210 | 25.688 | 327 | 178 | 14 | 26 | 340 | 305 | 578 | 5.94e-20 | 94.7 |
| MsG0680031055.01.T01 | MTR_3g101210 | 25.688 | 327 | 178 | 14 | 26 | 340 | 305 | 578 | 6.83e-20 | 94.4 |
| MsG0680031055.01.T01 | MTR_6g033130 | 29.139 | 302 | 154 | 9 | 35 | 324 | 973 | 1226 | 1.07e-18 | 91.3 |
| MsG0680031055.01.T01 | MTR_3g073250 | 27.119 | 236 | 118 | 8 | 62 | 294 | 316 | 500 | 4.74e-18 | 88.2 |
| MsG0680031055.01.T01 | MTR_1g052115 | 25.246 | 305 | 163 | 10 | 35 | 330 | 10 | 258 | 6.79e-18 | 88.6 |
| MsG0680031055.01.T01 | MTR_5g049520 | 48.193 | 83 | 43 | 0 | 72 | 154 | 85 | 167 | 4.17e-17 | 79.7 |
| MsG0680031055.01.T01 | MTR_4g132860 | 26.190 | 294 | 162 | 10 | 31 | 319 | 82 | 325 | 1.50e-16 | 82.4 |
| MsG0680031055.01.T01 | MTR_3g048687 | 58.730 | 63 | 20 | 1 | 107 | 169 | 35 | 91 | 4.44e-16 | 74.3 |
| MsG0680031055.01.T01 | MTR_7g092360 | 23.824 | 319 | 187 | 11 | 16 | 330 | 4 | 270 | 1.24e-15 | 80.9 |
| MsG0680031055.01.T01 | MTR_1g048630 | 26.939 | 245 | 128 | 7 | 31 | 274 | 9 | 203 | 2.29e-15 | 80.9 |
| MsG0680031055.01.T01 | MTR_4g128650 | 25.828 | 302 | 164 | 9 | 35 | 324 | 817 | 1070 | 2.79e-15 | 80.5 |
| MsG0680031055.01.T01 | MTR_3g076970 | 25.890 | 309 | 151 | 11 | 22 | 305 | 21 | 276 | 6.04e-15 | 77.4 |
| MsG0680031055.01.T01 | MTR_3g056013 | 56.140 | 57 | 25 | 0 | 274 | 330 | 12 | 68 | 7.46e-15 | 70.5 |
| MsG0680031055.01.T01 | MTR_4g082325 | 26.562 | 256 | 143 | 7 | 21 | 274 | 135 | 347 | 8.09e-15 | 77.4 |
| MsG0680031055.01.T01 | MTR_2g005290 | 24.000 | 325 | 176 | 13 | 32 | 332 | 13 | 290 | 1.39e-14 | 76.3 |
| MsG0680031055.01.T01 | MTR_0068s0070 | 51.613 | 62 | 30 | 0 | 89 | 150 | 58 | 119 | 6.11e-14 | 69.3 |
| MsG0680031055.01.T01 | MTR_1g099110 | 25.097 | 259 | 134 | 10 | 27 | 280 | 264 | 467 | 1.17e-12 | 71.2 |
| MsG0680031055.01.T01 | MTR_1g099110 | 25.097 | 259 | 134 | 10 | 27 | 280 | 281 | 484 | 1.50e-12 | 71.2 |
| MsG0680031055.01.T01 | MTR_6g016040 | 24.855 | 346 | 175 | 14 | 2 | 324 | 88 | 371 | 1.86e-12 | 70.1 |
| MsG0680031055.01.T01 | MTR_1g075880 | 25.249 | 301 | 196 | 9 | 34 | 322 | 122 | 405 | 3.35e-12 | 69.7 |
| MsG0680031055.01.T01 | MTR_3g073260 | 43.011 | 93 | 45 | 5 | 100 | 188 | 23 | 111 | 5.84e-12 | 64.7 |
| MsG0680031055.01.T01 | MTR_1g042700 | 23.476 | 328 | 221 | 10 | 34 | 348 | 120 | 430 | 8.14e-12 | 68.6 |
| MsG0680031055.01.T01 | MTR_1g442790 | 24.746 | 295 | 206 | 8 | 34 | 322 | 115 | 399 | 1.20e-11 | 68.2 |
| MsG0680031055.01.T01 | MTR_1g442790 | 24.746 | 295 | 206 | 8 | 34 | 322 | 115 | 399 | 1.47e-11 | 67.8 |
| MsG0680031055.01.T01 | MTR_5g087350 | 30.165 | 242 | 123 | 10 | 34 | 269 | 696 | 897 | 3.18e-11 | 67.4 |
| MsG0680031055.01.T01 | MTR_4g036575 | 23.108 | 251 | 131 | 10 | 34 | 271 | 720 | 921 | 4.19e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031055.01.T01 | AT5G58350 | 53.560 | 618 | 222 | 10 | 19 | 630 | 9 | 567 | 0.0 | 600 |
| MsG0680031055.01.T01 | AT3G51630 | 61.343 | 432 | 116 | 3 | 18 | 441 | 14 | 402 | 0.0 | 533 |
| MsG0680031055.01.T01 | AT3G51630 | 61.343 | 432 | 116 | 3 | 18 | 441 | 14 | 402 | 0.0 | 533 |
| MsG0680031055.01.T01 | AT3G22420 | 46.935 | 522 | 230 | 9 | 19 | 513 | 14 | 515 | 1.19e-151 | 452 |
| MsG0680031055.01.T01 | AT3G48260 | 52.500 | 440 | 158 | 6 | 7 | 444 | 2 | 392 | 2.24e-146 | 435 |
| MsG0680031055.01.T01 | AT3G22420 | 44.991 | 549 | 228 | 11 | 19 | 513 | 14 | 542 | 1.35e-145 | 437 |
| MsG0680031055.01.T01 | AT3G22420 | 45.402 | 522 | 206 | 8 | 19 | 513 | 14 | 483 | 2.27e-145 | 434 |
| MsG0680031055.01.T01 | AT3G22420 | 45.402 | 522 | 206 | 8 | 19 | 513 | 85 | 554 | 5.26e-145 | 436 |
| MsG0680031055.01.T01 | AT5G28080 | 47.863 | 468 | 155 | 4 | 19 | 441 | 15 | 438 | 3.78e-144 | 429 |
| MsG0680031055.01.T01 | AT3G22420 | 43.534 | 549 | 204 | 10 | 19 | 513 | 14 | 510 | 1.95e-139 | 420 |
| MsG0680031055.01.T01 | AT3G22420 | 43.534 | 549 | 204 | 10 | 19 | 513 | 85 | 581 | 4.20e-139 | 422 |
| MsG0680031055.01.T01 | AT3G04910 | 57.595 | 316 | 90 | 1 | 19 | 334 | 14 | 285 | 4.99e-122 | 379 |
| MsG0680031055.01.T01 | AT3G04910 | 51.250 | 80 | 38 | 1 | 362 | 441 | 386 | 464 | 1.46e-16 | 84.0 |
| MsG0680031055.01.T01 | AT3G18750 | 43.432 | 472 | 177 | 6 | 20 | 450 | 19 | 441 | 2.00e-121 | 373 |
| MsG0680031055.01.T01 | AT3G18750 | 43.432 | 472 | 177 | 6 | 20 | 450 | 19 | 441 | 2.00e-121 | 373 |
| MsG0680031055.01.T01 | AT3G18750 | 43.432 | 472 | 177 | 6 | 20 | 450 | 19 | 441 | 2.00e-121 | 373 |
| MsG0680031055.01.T01 | AT5G28080 | 43.590 | 468 | 138 | 5 | 19 | 441 | 15 | 401 | 5.22e-121 | 368 |
| MsG0680031055.01.T01 | AT1G49160 | 43.939 | 462 | 174 | 7 | 20 | 441 | 19 | 435 | 6.06e-120 | 369 |
| MsG0680031055.01.T01 | AT5G41990 | 43.028 | 502 | 212 | 6 | 16 | 489 | 16 | 471 | 1.03e-119 | 368 |
| MsG0680031055.01.T01 | AT3G18750 | 43.355 | 459 | 170 | 6 | 33 | 450 | 14 | 423 | 1.14e-116 | 360 |
| MsG0680031055.01.T01 | AT1G64630 | 43.424 | 479 | 186 | 7 | 16 | 455 | 3 | 435 | 5.49e-115 | 355 |
| MsG0680031055.01.T01 | AT1G49160 | 40.079 | 509 | 173 | 8 | 20 | 441 | 19 | 482 | 6.06e-111 | 347 |
| MsG0680031055.01.T01 | AT3G04910 | 56.610 | 295 | 84 | 1 | 40 | 334 | 12 | 262 | 1.73e-109 | 345 |
| MsG0680031055.01.T01 | AT3G04910 | 51.250 | 80 | 38 | 1 | 362 | 441 | 363 | 441 | 1.51e-16 | 84.0 |
| MsG0680031055.01.T01 | AT1G49160 | 43.379 | 438 | 163 | 7 | 44 | 441 | 25 | 417 | 3.51e-109 | 340 |
| MsG0680031055.01.T01 | AT5G55560 | 50.301 | 332 | 120 | 2 | 1 | 330 | 1 | 289 | 1.39e-108 | 330 |
| MsG0680031055.01.T01 | AT5G28080 | 45.455 | 396 | 127 | 4 | 91 | 441 | 1 | 352 | 1.71e-107 | 331 |
| MsG0680031055.01.T01 | AT5G28080 | 45.455 | 396 | 127 | 4 | 91 | 441 | 1 | 352 | 1.71e-107 | 331 |
| MsG0680031055.01.T01 | AT5G28080 | 45.455 | 396 | 127 | 4 | 91 | 441 | 1 | 352 | 1.71e-107 | 331 |
| MsG0680031055.01.T01 | AT5G28080 | 45.455 | 396 | 127 | 4 | 91 | 441 | 1 | 352 | 1.71e-107 | 331 |
| MsG0680031055.01.T01 | AT5G28080 | 45.455 | 396 | 127 | 4 | 91 | 441 | 1 | 352 | 1.71e-107 | 331 |
| MsG0680031055.01.T01 | AT3G48260 | 51.603 | 343 | 117 | 5 | 104 | 444 | 2 | 297 | 6.36e-104 | 322 |
| MsG0680031055.01.T01 | AT1G49160 | 46.927 | 358 | 99 | 3 | 20 | 330 | 19 | 332 | 3.97e-102 | 320 |
| MsG0680031055.01.T01 | AT3G18750 | 61.236 | 178 | 68 | 1 | 20 | 197 | 19 | 195 | 5.48e-71 | 239 |
| MsG0680031055.01.T01 | AT3G18750 | 61.236 | 178 | 68 | 1 | 20 | 197 | 19 | 195 | 5.48e-71 | 239 |
| MsG0680031055.01.T01 | AT1G49160 | 39.660 | 353 | 128 | 7 | 129 | 441 | 1 | 308 | 1.07e-68 | 231 |
| MsG0680031055.01.T01 | AT1G49160 | 39.660 | 353 | 128 | 7 | 129 | 441 | 1 | 308 | 1.07e-68 | 231 |
| MsG0680031055.01.T01 | AT1G49160 | 39.660 | 353 | 128 | 7 | 129 | 441 | 1 | 308 | 1.07e-68 | 231 |
| MsG0680031055.01.T01 | AT3G04910 | 54.680 | 203 | 48 | 1 | 132 | 334 | 1 | 159 | 6.72e-63 | 219 |
| MsG0680031055.01.T01 | AT3G04910 | 51.250 | 80 | 38 | 1 | 362 | 441 | 260 | 338 | 1.33e-16 | 84.0 |
| MsG0680031055.01.T01 | AT5G28080 | 42.041 | 245 | 97 | 3 | 242 | 441 | 1 | 245 | 7.08e-51 | 179 |
| MsG0680031055.01.T01 | AT1G63700 | 28.324 | 346 | 187 | 14 | 24 | 365 | 396 | 684 | 2.09e-29 | 125 |
| MsG0680031055.01.T01 | AT1G63700 | 28.324 | 346 | 187 | 14 | 24 | 365 | 396 | 684 | 2.09e-29 | 125 |
| MsG0680031055.01.T01 | AT1G53570 | 29.524 | 315 | 168 | 11 | 21 | 330 | 205 | 470 | 5.05e-29 | 122 |
| MsG0680031055.01.T01 | AT1G53570 | 29.524 | 315 | 168 | 11 | 21 | 330 | 205 | 470 | 5.44e-29 | 122 |
| MsG0680031055.01.T01 | AT1G53570 | 29.524 | 315 | 168 | 11 | 21 | 330 | 205 | 470 | 7.12e-29 | 122 |
| MsG0680031055.01.T01 | AT1G53570 | 29.524 | 315 | 168 | 11 | 21 | 330 | 205 | 470 | 7.12e-29 | 122 |
| MsG0680031055.01.T01 | AT1G53570 | 28.655 | 342 | 190 | 11 | 21 | 357 | 205 | 497 | 7.19e-29 | 122 |
| MsG0680031055.01.T01 | AT1G53570 | 28.655 | 342 | 190 | 11 | 21 | 357 | 205 | 497 | 7.84e-29 | 122 |
| MsG0680031055.01.T01 | AT4G08500 | 30.164 | 305 | 154 | 12 | 32 | 330 | 336 | 587 | 1.99e-27 | 117 |
| MsG0680031055.01.T01 | AT4G08470 | 30.820 | 305 | 156 | 14 | 32 | 332 | 306 | 559 | 3.57e-26 | 113 |
| MsG0680031055.01.T01 | AT4G08470 | 29.936 | 314 | 168 | 15 | 21 | 332 | 214 | 477 | 1.87e-25 | 110 |
| MsG0680031055.01.T01 | AT4G12020 | 29.801 | 302 | 156 | 13 | 32 | 330 | 1621 | 1869 | 1.22e-24 | 110 |
| MsG0680031055.01.T01 | AT4G12020 | 29.801 | 302 | 156 | 13 | 32 | 330 | 1629 | 1877 | 1.39e-24 | 110 |
| MsG0680031055.01.T01 | AT4G12020 | 29.801 | 302 | 156 | 13 | 32 | 330 | 1554 | 1802 | 1.48e-24 | 110 |
| MsG0680031055.01.T01 | AT4G08480 | 29.508 | 305 | 156 | 12 | 32 | 330 | 504 | 755 | 1.64e-24 | 109 |
| MsG0680031055.01.T01 | AT4G12020 | 28.904 | 301 | 144 | 12 | 32 | 330 | 1621 | 1853 | 8.28e-24 | 108 |
| MsG0680031055.01.T01 | AT4G12020 | 28.904 | 301 | 144 | 12 | 32 | 330 | 1629 | 1861 | 8.97e-24 | 107 |
| MsG0680031055.01.T01 | AT1G09000 | 26.708 | 322 | 176 | 11 | 32 | 342 | 72 | 344 | 7.14e-23 | 103 |
| MsG0680031055.01.T01 | AT1G09000 | 26.708 | 322 | 176 | 11 | 32 | 342 | 72 | 344 | 7.70e-23 | 103 |
| MsG0680031055.01.T01 | AT5G66850 | 26.769 | 325 | 170 | 13 | 20 | 330 | 337 | 607 | 2.20e-22 | 102 |
| MsG0680031055.01.T01 | AT5G66850 | 26.769 | 325 | 170 | 13 | 20 | 330 | 337 | 607 | 2.52e-22 | 102 |
| MsG0680031055.01.T01 | AT1G54960 | 25.455 | 330 | 192 | 11 | 17 | 339 | 57 | 339 | 3.40e-22 | 102 |
| MsG0680031055.01.T01 | AT1G54960 | 25.455 | 330 | 192 | 11 | 17 | 339 | 57 | 339 | 3.40e-22 | 102 |
| MsG0680031055.01.T01 | AT4G29810 | 27.129 | 317 | 170 | 10 | 34 | 340 | 75 | 340 | 1.02e-21 | 97.8 |
| MsG0680031055.01.T01 | AT4G29810 | 27.129 | 317 | 170 | 10 | 34 | 340 | 84 | 349 | 1.39e-21 | 97.4 |
| MsG0680031055.01.T01 | AT3G13530 | 29.221 | 308 | 155 | 11 | 31 | 330 | 22 | 274 | 1.20e-20 | 97.8 |
| MsG0680031055.01.T01 | AT3G15220 | 27.273 | 308 | 168 | 12 | 26 | 330 | 13 | 267 | 1.57e-19 | 93.6 |
| MsG0680031055.01.T01 | AT3G07980 | 29.126 | 309 | 154 | 12 | 31 | 330 | 22 | 274 | 2.84e-19 | 93.2 |
| MsG0680031055.01.T01 | AT3G07980 | 28.896 | 308 | 156 | 12 | 31 | 330 | 22 | 274 | 3.10e-19 | 93.2 |
| MsG0680031055.01.T01 | AT2G35050 | 27.875 | 287 | 149 | 7 | 35 | 311 | 980 | 1218 | 1.23e-18 | 91.3 |
| MsG0680031055.01.T01 | AT2G35050 | 27.875 | 287 | 149 | 7 | 35 | 311 | 980 | 1218 | 1.23e-18 | 91.3 |
| MsG0680031055.01.T01 | AT1G16270 | 27.815 | 302 | 158 | 9 | 35 | 324 | 869 | 1122 | 7.78e-18 | 88.6 |
| MsG0680031055.01.T01 | AT1G16270 | 27.815 | 302 | 158 | 9 | 35 | 324 | 869 | 1122 | 7.78e-18 | 88.6 |
| MsG0680031055.01.T01 | AT1G16270 | 27.815 | 302 | 158 | 9 | 35 | 324 | 869 | 1122 | 7.78e-18 | 88.6 |
| MsG0680031055.01.T01 | AT1G79570 | 28.146 | 302 | 157 | 9 | 35 | 324 | 970 | 1223 | 1.07e-17 | 88.2 |
| MsG0680031055.01.T01 | AT1G79570 | 28.146 | 302 | 157 | 9 | 35 | 324 | 970 | 1223 | 1.07e-17 | 88.2 |
| MsG0680031055.01.T01 | AT5G57610 | 26.821 | 302 | 161 | 9 | 35 | 324 | 787 | 1040 | 1.33e-17 | 87.8 |
| MsG0680031055.01.T01 | AT3G20860 | 25.000 | 308 | 169 | 9 | 30 | 330 | 5 | 257 | 2.16e-17 | 85.5 |
| MsG0680031055.01.T01 | AT1G53165 | 23.031 | 508 | 290 | 16 | 33 | 516 | 19 | 449 | 3.47e-17 | 86.3 |
| MsG0680031055.01.T01 | AT1G69220 | 26.496 | 351 | 168 | 17 | 6 | 330 | 217 | 503 | 3.92e-17 | 86.3 |
| MsG0680031055.01.T01 | AT1G53165 | 23.622 | 508 | 291 | 18 | 33 | 516 | 19 | 453 | 7.36e-17 | 85.1 |
| MsG0680031055.01.T01 | AT4G08470 | 33.898 | 177 | 108 | 8 | 32 | 207 | 306 | 474 | 1.18e-16 | 83.6 |
| MsG0680031055.01.T01 | AT1G53165 | 23.228 | 508 | 297 | 17 | 33 | 516 | 19 | 457 | 1.23e-16 | 84.3 |
| MsG0680031055.01.T01 | AT4G26070 | 25.161 | 310 | 173 | 10 | 30 | 330 | 68 | 327 | 2.82e-16 | 81.3 |
| MsG0680031055.01.T01 | AT4G26070 | 25.161 | 310 | 173 | 10 | 30 | 330 | 56 | 315 | 3.05e-16 | 81.3 |
| MsG0680031055.01.T01 | AT4G26070 | 25.161 | 310 | 173 | 10 | 30 | 330 | 69 | 328 | 3.42e-16 | 81.3 |
| MsG0680031055.01.T01 | AT4G26070 | 25.161 | 310 | 173 | 10 | 30 | 330 | 69 | 328 | 3.42e-16 | 81.3 |
| MsG0680031055.01.T01 | AT3G24715 | 25.648 | 347 | 185 | 12 | 3 | 324 | 797 | 1095 | 3.81e-16 | 83.2 |
| MsG0680031055.01.T01 | AT3G24715 | 25.648 | 347 | 185 | 12 | 3 | 324 | 797 | 1095 | 3.81e-16 | 83.2 |
| MsG0680031055.01.T01 | AT3G24715 | 25.648 | 347 | 185 | 12 | 3 | 324 | 797 | 1095 | 3.81e-16 | 83.2 |
| MsG0680031055.01.T01 | AT1G14000 | 25.763 | 295 | 172 | 9 | 34 | 325 | 167 | 417 | 3.86e-16 | 81.6 |
| MsG0680031055.01.T01 | AT4G12020 | 33.987 | 153 | 93 | 6 | 32 | 183 | 1621 | 1766 | 5.76e-16 | 82.8 |
| MsG0680031055.01.T01 | AT4G12020 | 33.987 | 153 | 93 | 6 | 32 | 183 | 1621 | 1766 | 5.76e-16 | 82.8 |
| MsG0680031055.01.T01 | AT4G12020 | 33.333 | 153 | 94 | 6 | 32 | 183 | 1629 | 1774 | 1.08e-15 | 82.0 |
| MsG0680031055.01.T01 | AT4G12020 | 33.333 | 153 | 94 | 6 | 32 | 183 | 1629 | 1774 | 1.08e-15 | 82.0 |
| MsG0680031055.01.T01 | AT4G12020 | 33.333 | 153 | 94 | 6 | 32 | 183 | 1621 | 1766 | 1.11e-15 | 82.0 |
| MsG0680031055.01.T01 | AT1G50240 | 26.531 | 245 | 129 | 7 | 31 | 274 | 8 | 202 | 4.66e-15 | 79.7 |
| MsG0680031055.01.T01 | AT1G50240 | 26.531 | 245 | 129 | 7 | 31 | 274 | 8 | 202 | 4.66e-15 | 79.7 |
| MsG0680031055.01.T01 | AT3G61960 | 25.094 | 267 | 146 | 10 | 25 | 288 | 7 | 222 | 2.68e-14 | 76.6 |
| MsG0680031055.01.T01 | AT3G61960 | 25.283 | 265 | 144 | 10 | 26 | 287 | 8 | 221 | 3.68e-14 | 76.3 |
| MsG0680031055.01.T01 | AT1G53570 | 32.886 | 149 | 94 | 4 | 21 | 167 | 205 | 349 | 5.15e-14 | 75.9 |
| MsG0680031055.01.T01 | AT5G49660 | 26.275 | 255 | 132 | 10 | 33 | 277 | 660 | 868 | 7.17e-14 | 75.9 |
| MsG0680031055.01.T01 | AT1G45160 | 24.522 | 314 | 205 | 13 | 35 | 340 | 676 | 965 | 3.86e-13 | 73.6 |
| MsG0680031055.01.T01 | AT1G45160 | 24.522 | 314 | 205 | 13 | 35 | 340 | 676 | 965 | 7.09e-13 | 72.8 |
| MsG0680031055.01.T01 | AT4G26070 | 25.911 | 247 | 131 | 8 | 30 | 274 | 69 | 265 | 1.05e-12 | 70.1 |
| MsG0680031055.01.T01 | AT3G17850 | 23.282 | 262 | 178 | 9 | 35 | 293 | 888 | 1129 | 2.93e-12 | 70.9 |
| MsG0680031055.01.T01 | AT5G10930 | 23.548 | 310 | 180 | 14 | 26 | 330 | 10 | 267 | 4.23e-12 | 69.3 |
| MsG0680031055.01.T01 | AT3G23310 | 23.607 | 305 | 217 | 10 | 34 | 330 | 125 | 421 | 1.04e-11 | 68.6 |
| MsG0680031055.01.T01 | AT4G14350 | 25.256 | 293 | 206 | 9 | 34 | 322 | 124 | 407 | 1.07e-11 | 68.2 |
| MsG0680031055.01.T01 | AT4G14350 | 25.256 | 293 | 206 | 9 | 34 | 322 | 124 | 407 | 1.07e-11 | 68.2 |
| MsG0680031055.01.T01 | AT4G14350 | 25.256 | 293 | 206 | 9 | 34 | 322 | 124 | 407 | 1.07e-11 | 68.2 |
| MsG0680031055.01.T01 | AT4G14350 | 25.256 | 293 | 206 | 9 | 34 | 322 | 124 | 407 | 1.30e-11 | 68.2 |
| MsG0680031055.01.T01 | AT1G79570 | 31.953 | 169 | 103 | 5 | 35 | 195 | 970 | 1134 | 2.99e-11 | 67.4 |
| MsG0680031055.01.T01 | AT1G79570 | 31.953 | 169 | 103 | 5 | 35 | 195 | 970 | 1134 | 2.99e-11 | 67.4 |
Find 146 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCATAAACAATTGTTATTA+AGG | 0.183131 | 6:-13396671 | MsG0680031055.01.T01:three_prime_UTR |
| AGTATTAACGCACAATAATT+AGG | 0.214926 | 6:+13398360 | None:intergenic |
| GCAGAAGCACGAGAGTTTAT+TGG | 0.232799 | 6:-13398043 | MsG0680031055.01.T01:CDS |
| GAATCATCGATAACAGTTAT+TGG | 0.239654 | 6:-13397944 | MsG0680031055.01.T01:CDS |
| ATCTCCTTTGCAACATCAAT+TGG | 0.301206 | 6:+13397600 | None:intergenic |
| CTCATTTGGCATGTGTGTTT+TGG | 0.303542 | 6:-13398259 | MsG0680031055.01.T01:CDS |
| TTCAGACTTACAAGGAATAA+TGG | 0.311295 | 6:-13396733 | MsG0680031055.01.T01:three_prime_UTR |
| CTTGGAAAGGCTTTATTTAG+AGG | 0.312493 | 6:-13398905 | MsG0680031055.01.T01:CDS |
| AGAGATATCCATGCTATTTC+CGG | 0.316286 | 6:-13397517 | MsG0680031055.01.T01:CDS |
| AGGACTTCAATGTCAATAAC+TGG | 0.329285 | 6:-13397857 | MsG0680031055.01.T01:CDS |
| GTATTATTGTAATCATAAAA+AGG | 0.335993 | 6:-13399751 | MsG0680031055.01.T01:CDS |
| TAATAGGTTGGAGATATTCT+TGG | 0.337741 | 6:-13399033 | MsG0680031055.01.T01:intron |
| AGGTTAGTACACTCCCTATA+TGG | 0.358113 | 6:+13398216 | None:intergenic |
| CAGCCGGCACACAGTGTTAT+AGG | 0.360378 | 6:-13398474 | MsG0680031055.01.T01:CDS |
| ATGATCCTCCGGTAATTCAT+AGG | 0.369792 | 6:-13398587 | MsG0680031055.01.T01:CDS |
| TGACATCAGAATATCCATAT+AGG | 0.373300 | 6:-13398230 | MsG0680031055.01.T01:CDS |
| ATTACAGAAATGTTCACTTC+TGG | 0.374463 | 6:-13398796 | MsG0680031055.01.T01:CDS |
| CATCTTGGACAAGTGAAAAT+TGG | 0.375179 | 6:-13398531 | MsG0680031055.01.T01:CDS |
| CAAATATGTTATCGCATTTG+AGG | 0.375914 | 6:+13398562 | None:intergenic |
| CTCTCACATTCACTTGTAGA+AGG | 0.376585 | 6:+13397037 | None:intergenic |
| TCTCCTTTGCAACATCAATT+GGG | 0.387595 | 6:+13397601 | None:intergenic |
| AAACAAGACCGTGTAAGATT+TGG | 0.388644 | 6:+13398622 | None:intergenic |
| AATCATCGATAACAGTTATT+GGG | 0.389597 | 6:-13397943 | MsG0680031055.01.T01:CDS |
| TTGGAGATATTCTTGGAAAA+GGG | 0.391458 | 6:-13399026 | MsG0680031055.01.T01:CDS |
| GTTGGAGCTGTGGAAGATAC+TGG | 0.393589 | 6:-13396902 | MsG0680031055.01.T01:CDS |
| TTGAGGTCCCTATGAATTAC+CGG | 0.394207 | 6:+13398579 | None:intergenic |
| GACATCAGAATATCCATATA+GGG | 0.397018 | 6:-13398229 | MsG0680031055.01.T01:CDS |
| GTTGGAGATATTCTTGGAAA+AGG | 0.403517 | 6:-13399027 | MsG0680031055.01.T01:CDS |
| ATATTTGTCAATGGCCATCT+TGG | 0.407899 | 6:-13398546 | MsG0680031055.01.T01:CDS |
| CTAGTTGATGTGTACTCATT+TGG | 0.412624 | 6:-13398273 | MsG0680031055.01.T01:CDS |
| CTCTTCTTGTTCATCGTCGC+AGG | 0.416183 | 6:-13397424 | MsG0680031055.01.T01:CDS |
| TGAATGTAAATATATGTAGA+TGG | 0.424523 | 6:-13396635 | MsG0680031055.01.T01:three_prime_UTR |
| CGAGTGATCGGTGAAGTAAT+TGG | 0.428986 | 6:+13396960 | None:intergenic |
| CTGTAATGAAGTTGAAAGTC+CGG | 0.436799 | 6:+13398812 | None:intergenic |
| ATGTCGAAATTACTACATAC+TGG | 0.440332 | 6:+13396839 | None:intergenic |
| TCATGCAATTCTACACCTCT+TGG | 0.440820 | 6:-13398849 | MsG0680031055.01.T01:CDS |
| TGCAGGAACTCCGGAGTTCA+TGG | 0.441494 | 6:-13398328 | MsG0680031055.01.T01:CDS |
| CTTGGATTGATGTCGACAAC+CGG | 0.444588 | 6:-13398831 | MsG0680031055.01.T01:CDS |
| CTTTCTTGTATATCTGTGCC+AGG | 0.448175 | 6:+13398196 | None:intergenic |
| TTATAAGTGTTTGTCCTCTC+CGG | 0.448566 | 6:+13397498 | None:intergenic |
| ATTTCGACATTAGTTCTTCA+AGG | 0.449305 | 6:-13396826 | MsG0680031055.01.T01:CDS |
| TCAATCCGGAAAAGTGTTGC+TGG | 0.450597 | 6:+13398070 | None:intergenic |
| AAATTCATCTGTTGGCCACT+TGG | 0.454277 | 6:-13396695 | MsG0680031055.01.T01:three_prime_UTR |
| AAAGCAATTGATAAGGTCCT+TGG | 0.456166 | 6:-13398985 | MsG0680031055.01.T01:CDS |
| TTGAAGGAAAATTCATCTGT+TGG | 0.458176 | 6:-13396703 | MsG0680031055.01.T01:three_prime_UTR |
| CCTTTCCTGCAGGTTCTGCT+AGG | 0.459435 | 6:-13397659 | MsG0680031055.01.T01:intron |
| GTATACCAACTCATATTACT+AGG | 0.465452 | 6:-13398413 | MsG0680031055.01.T01:CDS |
| TCATCATCAGACACAAGAAA+TGG | 0.467100 | 6:+13397965 | None:intergenic |
| GTATTAACGCACAATAATTA+GGG | 0.470103 | 6:+13398361 | None:intergenic |
| ACCTTAGCATAGCGACCAGT+TGG | 0.470753 | 6:+13399684 | None:intergenic |
| GTGCTTCATTGAGCTTGACT+TGG | 0.474978 | 6:+13398944 | None:intergenic |
| AGAAAGATAGCATCATCATC+AGG | 0.476988 | 6:+13397824 | None:intergenic |
| TGATAAGGTCCTTGGAATAG+AGG | 0.477258 | 6:-13398977 | MsG0680031055.01.T01:CDS |
| GATAACAGTTATTGGGATGC+AGG | 0.477634 | 6:-13397936 | MsG0680031055.01.T01:CDS |
| CATGCAAGCAATCAAGAGTT+GGG | 0.482885 | 6:-13398649 | MsG0680031055.01.T01:CDS |
| ACAATTGTTATTAAGGTGAA+AGG | 0.483780 | 6:-13396664 | MsG0680031055.01.T01:three_prime_UTR |
| AGTTATTGACATTGAAGTCC+TGG | 0.485728 | 6:+13397859 | None:intergenic |
| AAATGGATAAACTTCAATTG+AGG | 0.487497 | 6:-13397892 | MsG0680031055.01.T01:CDS |
| TGCGATAACATATTTGTCAA+TGG | 0.487880 | 6:-13398555 | MsG0680031055.01.T01:CDS |
| GTGCTTCTGCATCTTCAATC+CGG | 0.489331 | 6:+13398056 | None:intergenic |
| GAATAATGGATGTGATTTGA+AGG | 0.489600 | 6:-13396719 | MsG0680031055.01.T01:three_prime_UTR |
| GCATGCAAGCAATCAAGAGT+TGG | 0.490468 | 6:-13398650 | MsG0680031055.01.T01:CDS |
| AATTCTTCGTGGTTCGCAGC+CGG | 0.494432 | 6:-13398490 | MsG0680031055.01.T01:CDS |
| TGTGCACTTGTGACTCATGA+TGG | 0.496900 | 6:+13397126 | None:intergenic |
| AGAGCTGATGATGTATCAAA+TGG | 0.497738 | 6:-13397378 | MsG0680031055.01.T01:CDS |
| ATCGTCGCAGGAATCATTGT+CGG | 0.497850 | 6:-13397412 | MsG0680031055.01.T01:CDS |
| GGAGTTGGACATCACAGATT+GGG | 0.498757 | 6:-13397571 | MsG0680031055.01.T01:CDS |
| ACTTCGTACGCCAGAGGACT+TGG | 0.499592 | 6:-13398923 | MsG0680031055.01.T01:CDS |
| AGTGTATAAAGCAATTGATA+AGG | 0.499964 | 6:-13398992 | MsG0680031055.01.T01:CDS |
| CAAGACCGTGTAAGATTTGG+CGG | 0.502736 | 6:+13398625 | None:intergenic |
| TATTCTTCTTCGTACAACTC+TGG | 0.502991 | 6:+13398303 | None:intergenic |
| AATTGAGGGGCGATTCAGCC+AGG | 0.506788 | 6:-13397877 | MsG0680031055.01.T01:CDS |
| AATGGATAAACTTCAATTGA+GGG | 0.511314 | 6:-13397891 | MsG0680031055.01.T01:CDS |
| AGGAGTTGGACATCACAGAT+TGG | 0.512748 | 6:-13397572 | MsG0680031055.01.T01:CDS |
| AAGATCAACTCACTTTGAAC+CGG | 0.512922 | 6:-13397087 | MsG0680031055.01.T01:CDS |
| GCATGATGGATTGGTGTTTG+AGG | 0.515597 | 6:+13398866 | None:intergenic |
| GTGCACTTGTGACTCATGAT+GGG | 0.519450 | 6:+13397127 | None:intergenic |
| TAAAGCCTTTCCAAGTCCTC+TGG | 0.521041 | 6:+13398913 | None:intergenic |
| ACAAGTCACTAATTGATATG+AGG | 0.522787 | 6:-13396985 | MsG0680031055.01.T01:CDS |
| CCTTAGCATAGCGACCAGTT+GGG | 0.525719 | 6:+13399685 | None:intergenic |
| AAGAATGATGAGAATGATGA+AGG | 0.528079 | 6:-13397477 | MsG0680031055.01.T01:CDS |
| AGACGGTTATTCAAGACAGT+TGG | 0.529292 | 6:-13396920 | MsG0680031055.01.T01:CDS |
| GGTCTAGCAGCAATTCTTCG+TGG | 0.532669 | 6:-13398501 | MsG0680031055.01.T01:CDS |
| GGTGTCAGTGAAAATTTCAA+AGG | 0.536773 | 6:+13397623 | None:intergenic |
| AGCTCGCAATGCTCTTCACA+CGG | 0.542354 | 6:-13397226 | MsG0680031055.01.T01:CDS |
| AGAAAGAAATATAAGCATGT+AGG | 0.543651 | 6:-13398672 | MsG0680031055.01.T01:CDS |
| TCGTCGCAGGAATCATTGTC+GGG | 0.543899 | 6:-13397411 | MsG0680031055.01.T01:CDS |
| ATCATAGAAGCAATTTCAGA+AGG | 0.548816 | 6:+13397546 | None:intergenic |
| GTGTGAAGAGCATTGCGAGC+TGG | 0.549751 | 6:+13397228 | None:intergenic |
| CCCAACTGGTCGCTATGCTA+AGG | 0.550469 | 6:-13399685 | MsG0680031055.01.T01:intron |
| AAAGGAGATGGTGAAGGAGT+TGG | 0.551370 | 6:-13397586 | MsG0680031055.01.T01:CDS |
| TTGAAGAGGTTAACAAAAGA+CGG | 0.552522 | 6:-13396937 | MsG0680031055.01.T01:CDS |
| TCTACATGAGCATGATCCTC+CGG | 0.554487 | 6:-13398598 | MsG0680031055.01.T01:CDS |
| GTGTCAGTGAAAATTTCAAA+GGG | 0.555379 | 6:+13397624 | None:intergenic |
| TGATCCTCCGGTAATTCATA+GGG | 0.556081 | 6:-13398586 | MsG0680031055.01.T01:CDS |
| TCACCGATCACTCGTTGAAG+AGG | 0.556758 | 6:-13396951 | MsG0680031055.01.T01:CDS |
| TACATGGAAACTGACCCAAC+TGG | 0.559389 | 6:-13399699 | MsG0680031055.01.T01:CDS |
| TCCTTGGAATAGAGGTAGCA+TGG | 0.561516 | 6:-13398969 | MsG0680031055.01.T01:CDS |
| TGTAGAATTGCATGATGGAT+TGG | 0.562370 | 6:+13398857 | None:intergenic |
| AACTCTGGTGCCATGAACTC+CGG | 0.565086 | 6:+13398318 | None:intergenic |
| TCACTTGTAGAAGGTTCTTG+TGG | 0.567517 | 6:+13397046 | None:intergenic |
| TAACCTCTTCAACGAGTGAT+CGG | 0.568542 | 6:+13396948 | None:intergenic |
| CTCCTTTGCAACATCAATTG+GGG | 0.570224 | 6:+13397602 | None:intergenic |
| CACCCCAATTGATGTTGCAA+AGG | 0.573292 | 6:-13397604 | MsG0680031055.01.T01:CDS |
| ATGTATCAAATGGATATCGC+TGG | 0.574795 | 6:-13397368 | MsG0680031055.01.T01:CDS |
| TGGAGATATTCTTGGAAAAG+GGG | 0.576345 | 6:-13399025 | MsG0680031055.01.T01:CDS |
| ATTCAAGACAGTTGGAGCTG+TGG | 0.578375 | 6:-13396912 | MsG0680031055.01.T01:CDS |
| AATGCATAGTAAATGCAGAA+AGG | 0.587553 | 6:-13398018 | MsG0680031055.01.T01:CDS |
| ACAAGTGAAAATTGGTGACC+TGG | 0.593478 | 6:-13398523 | MsG0680031055.01.T01:CDS |
| TGTCCTCTCCGGAAATAGCA+TGG | 0.597004 | 6:+13397509 | None:intergenic |
| TAGAGCTGAGCATAGTTACA+TGG | 0.603432 | 6:-13399715 | MsG0680031055.01.T01:CDS |
| TCATGAGTCACAAGTGCACA+AGG | 0.604064 | 6:-13397123 | MsG0680031055.01.T01:CDS |
| GCTCGCAATGCTCTTCACAC+GGG | 0.605680 | 6:-13397225 | MsG0680031055.01.T01:CDS |
| TGTAGCCTAGTAATATGAGT+TGG | 0.619591 | 6:+13398408 | None:intergenic |
| GTACCTATAACACTGTGTGC+CGG | 0.620876 | 6:+13398471 | None:intergenic |
| ATAACAGTTATTGGGATGCA+GGG | 0.621807 | 6:-13397935 | MsG0680031055.01.T01:CDS |
| CTTCTACAAGTGAATGTGAG+AGG | 0.623732 | 6:-13397036 | MsG0680031055.01.T01:CDS |
| AAATGCAGAAAGGAGACCAT+CGG | 0.626275 | 6:-13398008 | MsG0680031055.01.T01:CDS |
| TCCATGCTACCTCTATTCCA+AGG | 0.626468 | 6:+13398968 | None:intergenic |
| GTACGCCAGAGGACTTGGAA+AGG | 0.629389 | 6:-13398918 | MsG0680031055.01.T01:CDS |
| GAAGAATTGCTGCTAGACCC+AGG | 0.629721 | 6:+13398505 | None:intergenic |
| TAGTTCTTCAAGGAGTGACA+AGG | 0.631467 | 6:-13396816 | MsG0680031055.01.T01:CDS |
| ATATAGGGAGTGTACTAACC+TGG | 0.631751 | 6:-13398214 | MsG0680031055.01.T01:CDS |
| AAGACCGTGTAAGATTTGGC+GGG | 0.633602 | 6:+13398626 | None:intergenic |
| CAAGTGAAAATTGGTGACCT+GGG | 0.635686 | 6:-13398522 | MsG0680031055.01.T01:CDS |
| CGATGAACAAGAAGAGACAG+AGG | 0.642757 | 6:+13397431 | None:intergenic |
| AGAGGTGTAGAATTGCATGA+TGG | 0.646025 | 6:+13398852 | None:intergenic |
| GGACTTCAATGTCAATAACT+GGG | 0.646347 | 6:-13397856 | MsG0680031055.01.T01:CDS |
| GTGCAGATTGTTGACAAGAA+CGG | 0.648895 | 6:-13397797 | MsG0680031055.01.T01:intron |
| AATATGAGTTGGTATACCGA+AGG | 0.652300 | 6:+13398419 | None:intergenic |
| GGATAATGATGATATTGATG+AGG | 0.652997 | 6:+13397453 | None:intergenic |
| CAATTGTTTATGCATCCAAG+TGG | 0.653167 | 6:+13396680 | None:intergenic |
| AATGGATATCGCTGGCACCA+TGG | 0.653900 | 6:-13397360 | MsG0680031055.01.T01:intron |
| AATTGATGTTGCAAAGGAGA+TGG | 0.654025 | 6:-13397598 | MsG0680031055.01.T01:CDS |
| ATGGATAAACTTCAATTGAG+GGG | 0.655014 | 6:-13397890 | MsG0680031055.01.T01:CDS |
| GATATACAAGAAAGTGACAT+CGG | 0.656486 | 6:-13398187 | MsG0680031055.01.T01:intron |
| ATTGGTGTTTGAGGTTACTG+AGG | 0.667636 | 6:+13398875 | None:intergenic |
| TGTTGCAAAGGAGATGGTGA+AGG | 0.673210 | 6:-13397592 | MsG0680031055.01.T01:CDS |
| TAGAGAATCGTATATTAACA+AGG | 0.678263 | 6:-13397009 | MsG0680031055.01.T01:CDS |
| TGAAGCACTTCGTACGCCAG+AGG | 0.679806 | 6:-13398929 | MsG0680031055.01.T01:CDS |
| TGGGCCCGCCAAATCTTACA+CGG | 0.688976 | 6:-13398630 | MsG0680031055.01.T01:CDS |
| TATCCATGCTATTTCCGGAG+AGG | 0.694626 | 6:-13397512 | MsG0680031055.01.T01:CDS |
| AGGTCCCTATGAATTACCGG+AGG | 0.694955 | 6:+13398582 | None:intergenic |
| GATGAACAAGAAGAGACAGA+GGG | 0.707224 | 6:+13397432 | None:intergenic |
| TCGAAATTACTACATACTGG+CGG | 0.714365 | 6:+13396842 | None:intergenic |
| GTTGTCGACATCAATCCAAG+AGG | 0.726914 | 6:+13398834 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTTTTCTTTTTTTC+AGG | - | Chr6:13399734-13399753 | MsG0680031055.01.T01:CDS | 10.0% |
| !! | GTATTATTGTAATCATAAAA+AGG | - | Chr6:13396582-13396601 | MsG0680031055.01.T01:three_prime_UTR | 15.0% |
| !! | TTTATGATTACAATAATACA+TGG | + | Chr6:13396581-13396600 | None:intergenic | 15.0% |
| !!! | TTTTTTCTTTTTTCATTTGT+GGG | - | Chr6:13396767-13396786 | MsG0680031055.01.T01:three_prime_UTR | 15.0% |
| !! | ATTTCAGTGTAGTTTAAAAA+TGG | + | Chr6:13398425-13398444 | None:intergenic | 20.0% |
| !! | TGAATGTAAATATATGTAGA+TGG | - | Chr6:13399698-13399717 | MsG0680031055.01.T01:CDS | 20.0% |
| !!! | ATCAGTAATTGATAAGTTTT+TGG | - | Chr6:13397625-13397644 | MsG0680031055.01.T01:CDS | 20.0% |
| !!! | ATTGTTATTTCATTTGACTT+TGG | - | Chr6:13396719-13396738 | MsG0680031055.01.T01:three_prime_UTR | 20.0% |
| !!! | ATTTTTAAACTACACTGAAA+TGG | - | Chr6:13398424-13398443 | MsG0680031055.01.T01:CDS | 20.0% |
| !!! | GTTTTTTCTTTTTTCATTTG+TGG | - | Chr6:13396766-13396785 | MsG0680031055.01.T01:three_prime_UTR | 20.0% |
| !!! | TGCATAAACAATTGTTATTA+AGG | - | Chr6:13399662-13399681 | MsG0680031055.01.T01:intron | 20.0% |
| !!! | TTGTTATTTCATTTGACTTT+GGG | - | Chr6:13396720-13396739 | MsG0680031055.01.T01:three_prime_UTR | 20.0% |
| !!! | TTTTTCTTTTTTCATTTGTG+GGG | - | Chr6:13396768-13396787 | MsG0680031055.01.T01:exon | 20.0% |
| ! | AAATGGATAAACTTCAATTG+AGG | - | Chr6:13398441-13398460 | MsG0680031055.01.T01:CDS | 25.0% |
| ! | AATCATCGATAACAGTTATT+GGG | - | Chr6:13398390-13398409 | MsG0680031055.01.T01:CDS | 25.0% |
| ! | AATGGATAAACTTCAATTGA+GGG | - | Chr6:13398442-13398461 | MsG0680031055.01.T01:CDS | 25.0% |
| ! | AGAAAGAAATATAAGCATGT+AGG | - | Chr6:13397661-13397680 | MsG0680031055.01.T01:intron | 25.0% |
| ! | AGTATTAACGCACAATAATT+AGG | + | Chr6:13397976-13397995 | None:intergenic | 25.0% |
| ! | AGTGTATAAAGCAATTGATA+AGG | - | Chr6:13397341-13397360 | MsG0680031055.01.T01:intron | 25.0% |
| ! | ATCAAGAAGAAAACATAAGA+TGG | + | Chr6:13396688-13396707 | None:intergenic | 25.0% |
| ! | GTATTAACGCACAATAATTA+GGG | + | Chr6:13397975-13397994 | None:intergenic | 25.0% |
| ! | TAGAGAATCGTATATTAACA+AGG | - | Chr6:13399324-13399343 | MsG0680031055.01.T01:intron | 25.0% |
| ! | TATAGAATTACCAAAAAGCA+TGG | - | Chr6:13397159-13397178 | MsG0680031055.01.T01:CDS | 25.0% |
| ! | TTGAGTAATAAGAAAACATC+AGG | + | Chr6:13398564-13398583 | None:intergenic | 25.0% |
| ! | TTTCTATCTTTCAATGTTCA+GGG | - | Chr6:13398233-13398252 | MsG0680031055.01.T01:CDS | 25.0% |
| !! | ACAATTGTTATTAAGGTGAA+AGG | - | Chr6:13399669-13399688 | MsG0680031055.01.T01:intron | 25.0% |
| !! | CATAGATTTTGAATCAGAAT+TGG | - | Chr6:13396983-13397002 | MsG0680031055.01.T01:CDS | 25.0% |
| !! | TTTTCTATCTTTCAATGTTC+AGG | - | Chr6:13398232-13398251 | MsG0680031055.01.T01:CDS | 25.0% |
| !! | TTTTTGCTTGTGATCTTATA+AGG | + | Chr6:13399467-13399486 | None:intergenic | 25.0% |
| !!! | ATGATACTGATTTAATAGGT+TGG | - | Chr6:13397288-13397307 | MsG0680031055.01.T01:intron | 25.0% |
| !!! | CAATTTTTAACTCTTTTGTG+AGG | - | Chr6:13397009-13397028 | MsG0680031055.01.T01:CDS | 25.0% |
| !!! | GACAATGATACTGATTTAAT+AGG | - | Chr6:13397284-13397303 | MsG0680031055.01.T01:intron | 25.0% |
| !!! | GTTTTAGTATAGTAACATAG+TGG | - | Chr6:13397135-13397154 | MsG0680031055.01.T01:CDS | 25.0% |
| AAGAATGATGAGAATGATGA+AGG | - | Chr6:13398856-13398875 | MsG0680031055.01.T01:CDS | 30.0% | |
| AATGCATAGTAAATGCAGAA+AGG | - | Chr6:13398315-13398334 | MsG0680031055.01.T01:CDS | 30.0% | |
| ACAAGTCACTAATTGATATG+AGG | - | Chr6:13399348-13399367 | MsG0680031055.01.T01:intron | 30.0% | |
| ACATCGGTAAATTAAGAACT+TGG | - | Chr6:13398162-13398181 | MsG0680031055.01.T01:intron | 30.0% | |
| ATCATAGAAGCAATTTCAGA+AGG | + | Chr6:13398790-13398809 | None:intergenic | 30.0% | |
| ATCTGTAGTAACAGTTTATC+AGG | + | Chr6:13399069-13399088 | None:intergenic | 30.0% | |
| ATGGATAAACTTCAATTGAG+GGG | - | Chr6:13398443-13398462 | MsG0680031055.01.T01:CDS | 30.0% | |
| ATGTAAACACATGTTTGTGT+CGG | - | Chr6:13396899-13396918 | MsG0680031055.01.T01:CDS | 30.0% | |
| ATGTCGAAATTACTACATAC+TGG | + | Chr6:13399497-13399516 | None:intergenic | 30.0% | |
| ATTACAGAAATGTTCACTTC+TGG | - | Chr6:13397537-13397556 | MsG0680031055.01.T01:CDS | 30.0% | |
| CAAATATGTTATCGCATTTG+AGG | + | Chr6:13397774-13397793 | None:intergenic | 30.0% | |
| CACTGACACTTATGATTTAA+AGG | + | Chr6:13396960-13396979 | None:intergenic | 30.0% | |
| GAATCATCGATAACAGTTAT+TGG | - | Chr6:13398389-13398408 | MsG0680031055.01.T01:CDS | 30.0% | |
| GACATCAGAATATCCATATA+GGG | - | Chr6:13398104-13398123 | MsG0680031055.01.T01:intron | 30.0% | |
| GATATACAAGAAAGTGACAT+CGG | - | Chr6:13398146-13398165 | MsG0680031055.01.T01:intron | 30.0% | |
| GGATAATGATGATATTGATG+AGG | + | Chr6:13398883-13398902 | None:intergenic | 30.0% | |
| GTATACCAACTCATATTACT+AGG | - | Chr6:13397920-13397939 | MsG0680031055.01.T01:CDS | 30.0% | |
| GTGTCAGTGAAAATTTCAAA+GGG | + | Chr6:13398712-13398731 | None:intergenic | 30.0% | |
| TGACATCAGAATATCCATAT+AGG | - | Chr6:13398103-13398122 | MsG0680031055.01.T01:intron | 30.0% | |
| TGCGATAACATATTTGTCAA+TGG | - | Chr6:13397778-13397797 | MsG0680031055.01.T01:intron | 30.0% | |
| TTATCAGGTCAATCATTTCA+GGG | + | Chr6:13399054-13399073 | None:intergenic | 30.0% | |
| TTATTACTCAAAGCCATATC+TGG | - | Chr6:13398573-13398592 | MsG0680031055.01.T01:CDS | 30.0% | |
| TTCAGACTTACAAGGAATAA+TGG | - | Chr6:13399600-13399619 | MsG0680031055.01.T01:intron | 30.0% | |
| TTGAAGAGGTTAACAAAAGA+CGG | - | Chr6:13399396-13399415 | MsG0680031055.01.T01:intron | 30.0% | |
| TTGAAGGAAAATTCATCTGT+TGG | - | Chr6:13399630-13399649 | MsG0680031055.01.T01:intron | 30.0% | |
| TTGGAGATATTCTTGGAAAA+GGG | - | Chr6:13397307-13397326 | MsG0680031055.01.T01:intron | 30.0% | |
| TTTATCAGGTCAATCATTTC+AGG | + | Chr6:13399055-13399074 | None:intergenic | 30.0% | |
| ! | ATTACCAAAAAGCATGGATA+AGG | - | Chr6:13397165-13397184 | MsG0680031055.01.T01:CDS | 30.0% |
| ! | ATTTCGACATTAGTTCTTCA+AGG | - | Chr6:13399507-13399526 | MsG0680031055.01.T01:intron | 30.0% |
| ! | ATTTGACTTTGGGTTATTGA+AGG | - | Chr6:13396730-13396749 | MsG0680031055.01.T01:three_prime_UTR | 30.0% |
| ! | GTTTAGCTAAAATTTTGCAC+CGG | + | Chr6:13399268-13399287 | None:intergenic | 30.0% |
| ! | TAATAGGTTGGAGATATTCT+TGG | - | Chr6:13397300-13397319 | MsG0680031055.01.T01:intron | 30.0% |
| ! | TTAATACTCTCTTTTGTTGC+AGG | - | Chr6:13397988-13398007 | MsG0680031055.01.T01:CDS | 30.0% |
| ! | TTACCAAAAAGCATGGATAA+GGG | - | Chr6:13397166-13397185 | MsG0680031055.01.T01:CDS | 30.0% |
| ! | TTTCAGGGCATTAATGAAAT+AGG | + | Chr6:13399039-13399058 | None:intergenic | 30.0% |
| !! | GAATAATGGATGTGATTTGA+AGG | - | Chr6:13399614-13399633 | MsG0680031055.01.T01:intron | 30.0% |
| !!! | GCAGGTTTTTTTATATCCTT+CGG | - | Chr6:13397898-13397917 | MsG0680031055.01.T01:CDS | 30.0% |
| !!! | TTTTTCCATATTTGCTGTGA+TGG | - | Chr6:13397229-13397248 | MsG0680031055.01.T01:CDS | 30.0% |
| AAACAAGACCGTGTAAGATT+TGG | + | Chr6:13397714-13397733 | None:intergenic | 35.0% | |
| AAAGCAATTGATAAGGTCCT+TGG | - | Chr6:13397348-13397367 | MsG0680031055.01.T01:intron | 35.0% | |
| AAAGGAAGAATAGGAAACTG+CGG | + | Chr6:13398659-13398678 | None:intergenic | 35.0% | |
| AAGATCAACTCACTTTGAAC+CGG | - | Chr6:13399246-13399265 | MsG0680031055.01.T01:intron | 35.0% | |
| AATTGATGTTGCAAAGGAGA+TGG | - | Chr6:13398735-13398754 | MsG0680031055.01.T01:intron | 35.0% | |
| AGAAAGATAGCATCATCATC+AGG | + | Chr6:13398512-13398531 | None:intergenic | 35.0% | |
| AGGACTTCAATGTCAATAAC+TGG | - | Chr6:13398476-13398495 | MsG0680031055.01.T01:CDS | 35.0% | |
| AGTTATTGACATTGAAGTCC+TGG | + | Chr6:13398477-13398496 | None:intergenic | 35.0% | |
| ATAACAGTTATTGGGATGCA+GGG | - | Chr6:13398398-13398417 | MsG0680031055.01.T01:CDS | 35.0% | |
| ATATTTGTCAATGGCCATCT+TGG | - | Chr6:13397787-13397806 | MsG0680031055.01.T01:intron | 35.0% | |
| ATCTCCTTTGCAACATCAAT+TGG | + | Chr6:13398736-13398755 | None:intergenic | 35.0% | |
| ATGCTGGGACTATATGATAT+TGG | - | Chr6:13397257-13397276 | MsG0680031055.01.T01:intron | 35.0% | |
| ATGTATCAAATGGATATCGC+TGG | - | Chr6:13398965-13398984 | MsG0680031055.01.T01:CDS | 35.0% | |
| CAATTGTTTATGCATCCAAG+TGG | + | Chr6:13399656-13399675 | None:intergenic | 35.0% | |
| CATAAAAAGGACAACAACGA+TGG | - | Chr6:13396595-13396614 | MsG0680031055.01.T01:three_prime_UTR | 35.0% | |
| CATCTTGGACAAGTGAAAAT+TGG | - | Chr6:13397802-13397821 | MsG0680031055.01.T01:CDS | 35.0% | |
| CGCAGAAGAAAAATTCAAGT+CGG | + | Chr6:13399141-13399160 | None:intergenic | 35.0% | |
| CTGTAATGAAGTTGAAAGTC+CGG | + | Chr6:13397524-13397543 | None:intergenic | 35.0% | |
| GGACTTCAATGTCAATAACT+GGG | - | Chr6:13398477-13398496 | MsG0680031055.01.T01:CDS | 35.0% | |
| GGTGTCAGTGAAAATTTCAA+AGG | + | Chr6:13398713-13398732 | None:intergenic | 35.0% | |
| GTTGGAGATATTCTTGGAAA+AGG | - | Chr6:13397306-13397325 | MsG0680031055.01.T01:intron | 35.0% | |
| TATTCTTCTTCGTACAACTC+TGG | + | Chr6:13398033-13398052 | None:intergenic | 35.0% | |
| TCATCATCAGACACAAGAAA+TGG | + | Chr6:13398371-13398390 | None:intergenic | 35.0% | |
| TCGAAATTACTACATACTGG+CGG | + | Chr6:13399494-13399513 | None:intergenic | 35.0% | |
| TCTCCTTTGCAACATCAATT+GGG | + | Chr6:13398735-13398754 | None:intergenic | 35.0% | |
| TCTCTACAATGAACCAGATA+TGG | + | Chr6:13398589-13398608 | None:intergenic | 35.0% | |
| TGGAGATATTCTTGGAAAAG+GGG | - | Chr6:13397308-13397327 | MsG0680031055.01.T01:intron | 35.0% | |
| TGTAGCCTAGTAATATGAGT+TGG | + | Chr6:13397928-13397947 | None:intergenic | 35.0% | |
| TTATAAGTGTTTGTCCTCTC+CGG | + | Chr6:13398838-13398857 | None:intergenic | 35.0% | |
| TTCAACCATCACAGCAAATA+TGG | + | Chr6:13397237-13397256 | None:intergenic | 35.0% | |
| ! | AGAGCTGATGATGTATCAAA+TGG | - | Chr6:13398955-13398974 | MsG0680031055.01.T01:CDS | 35.0% |
| ! | CAATTTTCACTTGTCCAAGA+TGG | + | Chr6:13397804-13397823 | None:intergenic | 35.0% |
| ! | CGACTTGAATTTTTCTTCTG+CGG | - | Chr6:13399139-13399158 | MsG0680031055.01.T01:intron | 35.0% |
| ! | CTAGTTGATGTGTACTCATT+TGG | - | Chr6:13398060-13398079 | MsG0680031055.01.T01:CDS | 35.0% |
| ! | TACCAAAAAGCATGGATAAG+GGG | - | Chr6:13397167-13397186 | MsG0680031055.01.T01:CDS | 35.0% |
| !! | AATATGAGTTGGTATACCGA+AGG | + | Chr6:13397917-13397936 | None:intergenic | 35.0% |
| !! | AGAGATATCCATGCTATTTC+CGG | - | Chr6:13398816-13398835 | MsG0680031055.01.T01:CDS | 35.0% |
| !! | CTTGGAAAGGCTTTATTTAG+AGG | - | Chr6:13397428-13397447 | MsG0680031055.01.T01:CDS | 35.0% |
| !! | TGTAGAATTGCATGATGGAT+TGG | + | Chr6:13397479-13397498 | None:intergenic | 35.0% |
| !!! | CTTTTTTCATTTGTGGGGTT+GGG | - | Chr6:13396773-13396792 | MsG0680031055.01.T01:exon | 35.0% |
| !!! | GGTACTTATTTTGATGTTGC+AGG | - | Chr6:13397880-13397899 | MsG0680031055.01.T01:CDS | 35.0% |
| !!! | TCTTTTTTCATTTGTGGGGT+TGG | - | Chr6:13396772-13396791 | MsG0680031055.01.T01:exon | 35.0% |
| !!! | TTGCTGTTTTCAGACTTACA+AGG | - | Chr6:13399592-13399611 | MsG0680031055.01.T01:intron | 35.0% |
| AAATGCAGAAAGGAGACCAT+CGG | - | Chr6:13398325-13398344 | MsG0680031055.01.T01:CDS | 40.0% | |
| AAATTCATCTGTTGGCCACT+TGG | - | Chr6:13399638-13399657 | MsG0680031055.01.T01:intron | 40.0% | |
| AAGGAAGAATAGGAAACTGC+GGG | + | Chr6:13398658-13398677 | None:intergenic | 40.0% | |
| AGACGGTTATTCAAGACAGT+TGG | - | Chr6:13399413-13399432 | MsG0680031055.01.T01:intron | 40.0% | |
| AGGTTAGTACACTCCCTATA+TGG | + | Chr6:13398120-13398139 | None:intergenic | 40.0% | |
| ATAGGAAACTGCGGGTAAAT+AGG | + | Chr6:13398650-13398669 | None:intergenic | 40.0% | |
| ATGATCCTCCGGTAATTCAT+AGG | - | Chr6:13397746-13397765 | MsG0680031055.01.T01:intron | 40.0% | |
| CACCTACACATGTCAAACAA+TGG | - | Chr6:13396929-13396948 | MsG0680031055.01.T01:CDS | 40.0% | |
| CATGCAAGCAATCAAGAGTT+GGG | - | Chr6:13397684-13397703 | MsG0680031055.01.T01:intron | 40.0% | |
| CATGGATAAGGGGCAATATT+TGG | - | Chr6:13397177-13397196 | MsG0680031055.01.T01:CDS | 40.0% | |
| CCAAATATGACACTGACATC+TGG | - | Chr6:13397062-13397081 | MsG0680031055.01.T01:CDS | 40.0% | |
| CCAGATGTCAGTGTCATATT+TGG | + | Chr6:13397065-13397084 | None:intergenic | 40.0% | |
| CTCCTTTGCAACATCAATTG+GGG | + | Chr6:13398734-13398753 | None:intergenic | 40.0% | |
| CTCTCACATTCACTTGTAGA+AGG | + | Chr6:13399299-13399318 | None:intergenic | 40.0% | |
| CTTCTACAAGTGAATGTGAG+AGG | - | Chr6:13399297-13399316 | MsG0680031055.01.T01:intron | 40.0% | |
| CTTTCTTGTATATCTGTGCC+AGG | + | Chr6:13398140-13398159 | None:intergenic | 40.0% | |
| GATAACAGTTATTGGGATGC+AGG | - | Chr6:13398397-13398416 | MsG0680031055.01.T01:CDS | 40.0% | |
| GATGAACAAGAAGAGACAGA+GGG | + | Chr6:13398904-13398923 | None:intergenic | 40.0% | |
| GGGCAATATTTGGATAAGCA+TGG | - | Chr6:13397187-13397206 | MsG0680031055.01.T01:CDS | 40.0% | |
| GTCCATTGTTTGACATGTGT+AGG | + | Chr6:13396934-13396953 | None:intergenic | 40.0% | |
| GTGCAGATTGTTGACAAGAA+CGG | - | Chr6:13398536-13398555 | MsG0680031055.01.T01:CDS | 40.0% | |
| TAACCTCTTCAACGAGTGAT+CGG | + | Chr6:13399388-13399407 | None:intergenic | 40.0% | |
| TAGAGCTGAGCATAGTTACA+TGG | - | Chr6:13396618-13396637 | MsG0680031055.01.T01:three_prime_UTR | 40.0% | |
| TAGTTCTTCAAGGAGTGACA+AGG | - | Chr6:13399517-13399536 | MsG0680031055.01.T01:intron | 40.0% | |
| TCACTTGTAGAAGGTTCTTG+TGG | + | Chr6:13399290-13399309 | None:intergenic | 40.0% | |
| TCATGCAATTCTACACCTCT+TGG | - | Chr6:13397484-13397503 | MsG0680031055.01.T01:CDS | 40.0% | |
| TGATAAGGTCCTTGGAATAG+AGG | - | Chr6:13397356-13397375 | MsG0680031055.01.T01:intron | 40.0% | |
| TGATCCTCCGGTAATTCATA+GGG | - | Chr6:13397747-13397766 | MsG0680031055.01.T01:intron | 40.0% | |
| TTGAGGTCCCTATGAATTAC+CGG | + | Chr6:13397757-13397776 | None:intergenic | 40.0% | |
| ! | AAGTGCACAAGGTTTTCACA+TGG | - | Chr6:13399221-13399240 | MsG0680031055.01.T01:intron | 40.0% |
| ! | ACAAGTGAAAATTGGTGACC+TGG | - | Chr6:13397810-13397829 | MsG0680031055.01.T01:CDS | 40.0% |
| ! | AGAGGTGTAGAATTGCATGA+TGG | + | Chr6:13397484-13397503 | None:intergenic | 40.0% |
| ! | ATATAGGGAGTGTACTAACC+TGG | - | Chr6:13398119-13398138 | MsG0680031055.01.T01:intron | 40.0% |
| ! | ATTGGTGTTTGAGGTTACTG+AGG | + | Chr6:13397461-13397480 | None:intergenic | 40.0% |
| ! | CAAGTGAAAATTGGTGACCT+GGG | - | Chr6:13397811-13397830 | MsG0680031055.01.T01:CDS | 40.0% |
| ! | CTCATTTGGCATGTGTGTTT+TGG | - | Chr6:13398074-13398093 | MsG0680031055.01.T01:CDS | 40.0% |
| AAAGGAGATGGTGAAGGAGT+TGG | - | Chr6:13398747-13398766 | MsG0680031055.01.T01:intron | 45.0% | |
| AAGACCGTGTAAGATTTGGC+GGG | + | Chr6:13397710-13397729 | None:intergenic | 45.0% | |
| ACCTGCAGGAAAGGAAGAAT+AGG | + | Chr6:13398668-13398687 | None:intergenic | 45.0% | |
| AGGAGTTGGACATCACAGAT+TGG | - | Chr6:13398761-13398780 | MsG0680031055.01.T01:intron | 45.0% | |
| ATCGTCGCAGGAATCATTGT+CGG | - | Chr6:13398921-13398940 | MsG0680031055.01.T01:CDS | 45.0% | |
| ATTCAAGACAGTTGGAGCTG+TGG | - | Chr6:13399421-13399440 | MsG0680031055.01.T01:intron | 45.0% | |
| CAAGACCGTGTAAGATTTGG+CGG | + | Chr6:13397711-13397730 | None:intergenic | 45.0% | |
| CACCCCAATTGATGTTGCAA+AGG | - | Chr6:13398729-13398748 | MsG0680031055.01.T01:intron | 45.0% | |
| CGAGTGATCGGTGAAGTAAT+TGG | + | Chr6:13399376-13399395 | None:intergenic | 45.0% | |
| CGATGAACAAGAAGAGACAG+AGG | + | Chr6:13398905-13398924 | None:intergenic | 45.0% | |
| CTTGGATTGATGTCGACAAC+CGG | - | Chr6:13397502-13397521 | MsG0680031055.01.T01:CDS | 45.0% | |
| GCATGCAAGCAATCAAGAGT+TGG | - | Chr6:13397683-13397702 | MsG0680031055.01.T01:intron | 45.0% | |
| GCTGTGATGGTTGAAATGCT+GGG | - | Chr6:13397242-13397261 | MsG0680031055.01.T01:CDS | 45.0% | |
| GGAGTTGGACATCACAGATT+GGG | - | Chr6:13398762-13398781 | MsG0680031055.01.T01:intron | 45.0% | |
| GGGAAAAAGAAGACGTACCA+TGG | + | Chr6:13398993-13399012 | None:intergenic | 45.0% | |
| GTACCTATAACACTGTGTGC+CGG | + | Chr6:13397865-13397884 | None:intergenic | 45.0% | |
| GTGCACTTGTGACTCATGAT+GGG | + | Chr6:13399209-13399228 | None:intergenic | 45.0% | |
| GTGCTTCATTGAGCTTGACT+TGG | + | Chr6:13397392-13397411 | None:intergenic | 45.0% | |
| GTGCTTCTGCATCTTCAATC+CGG | + | Chr6:13398280-13398299 | None:intergenic | 45.0% | |
| GTTGTCGACATCAATCCAAG+AGG | + | Chr6:13397502-13397521 | None:intergenic | 45.0% | |
| TAAAGCCTTTCCAAGTCCTC+TGG | + | Chr6:13397423-13397442 | None:intergenic | 45.0% | |
| TACATGGAAACTGACCCAAC+TGG | - | Chr6:13396634-13396653 | MsG0680031055.01.T01:three_prime_UTR | 45.0% | |
| TCATGAGTCACAAGTGCACA+AGG | - | Chr6:13399210-13399229 | MsG0680031055.01.T01:intron | 45.0% | |
| TCCATGCTACCTCTATTCCA+AGG | + | Chr6:13397368-13397387 | None:intergenic | 45.0% | |
| TCCTATTCTTCCTTTCCTGC+AGG | - | Chr6:13398664-13398683 | MsG0680031055.01.T01:CDS | 45.0% | |
| TCCTTGGAATAGAGGTAGCA+TGG | - | Chr6:13397364-13397383 | MsG0680031055.01.T01:CDS | 45.0% | |
| TCGTGAGCTATGAAGCATAG+AGG | - | Chr6:13397033-13397052 | MsG0680031055.01.T01:CDS | 45.0% | |
| TCTACATGAGCATGATCCTC+CGG | - | Chr6:13397735-13397754 | MsG0680031055.01.T01:intron | 45.0% | |
| TGCTGTGATGGTTGAAATGC+TGG | - | Chr6:13397241-13397260 | MsG0680031055.01.T01:CDS | 45.0% | |
| TGTGCACTTGTGACTCATGA+TGG | + | Chr6:13399210-13399229 | None:intergenic | 45.0% | |
| TGTTGCAAAGGAGATGGTGA+AGG | - | Chr6:13398741-13398760 | MsG0680031055.01.T01:intron | 45.0% | |
| ! | AGCTACCAGCAACACTTTTC+CGG | - | Chr6:13398258-13398277 | MsG0680031055.01.T01:CDS | 45.0% |
| ! | CTCTTTTGTTGCAGGAACTC+CGG | - | Chr6:13397996-13398015 | MsG0680031055.01.T01:CDS | 45.0% |
| ! | GCAGAAGCACGAGAGTTTAT+TGG | - | Chr6:13398290-13398309 | MsG0680031055.01.T01:CDS | 45.0% |
| ! | TGCAACAGTTCTTTTGCCGA+TGG | + | Chr6:13398344-13398363 | None:intergenic | 45.0% |
| ! | TGCCCCTTATCCATGCTTTT+TGG | + | Chr6:13397172-13397191 | None:intergenic | 45.0% |
| !! | GCATGATGGATTGGTGTTTG+AGG | + | Chr6:13397470-13397489 | None:intergenic | 45.0% |
| !! | TATCCATGCTATTTCCGGAG+AGG | - | Chr6:13398821-13398840 | MsG0680031055.01.T01:CDS | 45.0% |
| !! | TCAATCCGGAAAAGTGTTGC+TGG | + | Chr6:13398266-13398285 | None:intergenic | 45.0% |
| AATGGATATCGCTGGCACCA+TGG | - | Chr6:13398973-13398992 | MsG0680031055.01.T01:CDS | 50.0% | |
| AATTCTTCGTGGTTCGCAGC+CGG | - | Chr6:13397843-13397862 | MsG0680031055.01.T01:CDS | 50.0% | |
| ACATTCCTAGCAGAACCTGC+AGG | + | Chr6:13398682-13398701 | None:intergenic | 50.0% | |
| ACCTTAGCATAGCGACCAGT+TGG | + | Chr6:13396652-13396671 | None:intergenic | 50.0% | |
| AGCTCGCAATGCTCTTCACA+CGG | - | Chr6:13399107-13399126 | MsG0680031055.01.T01:intron | 50.0% | |
| AGGTCCCTATGAATTACCGG+AGG | + | Chr6:13397754-13397773 | None:intergenic | 50.0% | |
| CCTTAGCATAGCGACCAGTT+GGG | + | Chr6:13396651-13396670 | None:intergenic | 50.0% | |
| CTCTTCTTGTTCATCGTCGC+AGG | - | Chr6:13398909-13398928 | MsG0680031055.01.T01:CDS | 50.0% | |
| GAAGAATTGCTGCTAGACCC+AGG | + | Chr6:13397831-13397850 | None:intergenic | 50.0% | |
| GGTCTAGCAGCAATTCTTCG+TGG | - | Chr6:13397832-13397851 | MsG0680031055.01.T01:CDS | 50.0% | |
| GTTGGAGCTGTGGAAGATAC+TGG | - | Chr6:13399431-13399450 | MsG0680031055.01.T01:intron | 50.0% | |
| TCACCGATCACTCGTTGAAG+AGG | - | Chr6:13399382-13399401 | MsG0680031055.01.T01:intron | 50.0% | |
| TCGTCGCAGGAATCATTGTC+GGG | - | Chr6:13398922-13398941 | MsG0680031055.01.T01:CDS | 50.0% | |
| TGTCCTCTCCGGAAATAGCA+TGG | + | Chr6:13398827-13398846 | None:intergenic | 50.0% | |
| !! | AACTCTGGTGCCATGAACTC+CGG | + | Chr6:13398018-13398037 | None:intergenic | 50.0% |
| AATTGAGGGGCGATTCAGCC+AGG | - | Chr6:13398456-13398475 | MsG0680031055.01.T01:CDS | 55.0% | |
| ACTTCGTACGCCAGAGGACT+TGG | - | Chr6:13397410-13397429 | MsG0680031055.01.T01:CDS | 55.0% | |
| CAGCCGGCACACAGTGTTAT+AGG | - | Chr6:13397859-13397878 | MsG0680031055.01.T01:CDS | 55.0% | |
| CCCAACTGGTCGCTATGCTA+AGG | - | Chr6:13396648-13396667 | MsG0680031055.01.T01:three_prime_UTR | 55.0% | |
| CCTAGCAGAACCTGCAGGAA+AGG | + | Chr6:13398677-13398696 | None:intergenic | 55.0% | |
| CCTTTCCTGCAGGTTCTGCT+AGG | - | Chr6:13398674-13398693 | MsG0680031055.01.T01:CDS | 55.0% | |
| GCTCGCAATGCTCTTCACAC+GGG | - | Chr6:13399108-13399127 | MsG0680031055.01.T01:intron | 55.0% | |
| GTACGCCAGAGGACTTGGAA+AGG | - | Chr6:13397415-13397434 | MsG0680031055.01.T01:CDS | 55.0% | |
| TGCAGGAACTCCGGAGTTCA+TGG | - | Chr6:13398005-13398024 | MsG0680031055.01.T01:CDS | 55.0% | |
| TGGGCCCGCCAAATCTTACA+CGG | - | Chr6:13397703-13397722 | MsG0680031055.01.T01:intron | 55.0% | |
| ! | TGAAGCACTTCGTACGCCAG+AGG | - | Chr6:13397404-13397423 | MsG0680031055.01.T01:CDS | 55.0% |
| !! | GTGTGAAGAGCATTGCGAGC+TGG | + | Chr6:13399108-13399127 | None:intergenic | 55.0% |
| ATCCACAGCGCAGCTGGTGA+CGG | + | Chr6:13399014-13399033 | None:intergenic | 60.0% | |
| TAGGACATCCACAGCGCAGC+TGG | + | Chr6:13399020-13399039 | None:intergenic | 60.0% | |
| TCCACAGCGCAGCTGGTGAC+GGG | + | Chr6:13399013-13399032 | None:intergenic | 65.0% | |
| TCCCGTCACCAGCTGCGCTG+TGG | - | Chr6:13399009-13399028 | MsG0680031055.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 13396580 | 13399775 | 13396580 | ID=MsG0680031055.01;Name=MsG0680031055.01 |
| Chr6 | mRNA | 13396580 | 13399775 | 13396580 | ID=MsG0680031055.01.T01;Parent=MsG0680031055.01;Name=MsG0680031055.01.T01;_AED=0.09;_eAED=0.09;_QI=0|1|0.66|1|1|0.83|6|207|653 |
| Chr6 | exon | 13396580 | 13397268 | 13396580 | ID=MsG0680031055.01.T01:exon:9481;Parent=MsG0680031055.01.T01 |
| Chr6 | exon | 13397361 | 13397669 | 13397361 | ID=MsG0680031055.01.T01:exon:9480;Parent=MsG0680031055.01.T01 |
| Chr6 | exon | 13397798 | 13398101 | 13397798 | ID=MsG0680031055.01.T01:exon:9479;Parent=MsG0680031055.01.T01 |
| Chr6 | exon | 13398188 | 13398698 | 13398188 | ID=MsG0680031055.01.T01:exon:9478;Parent=MsG0680031055.01.T01 |
| Chr6 | exon | 13398784 | 13399049 | 13398784 | ID=MsG0680031055.01.T01:exon:9477;Parent=MsG0680031055.01.T01 |
| Chr6 | exon | 13399686 | 13399775 | 13399686 | ID=MsG0680031055.01.T01:exon:9476;Parent=MsG0680031055.01.T01 |
| Chr6 | CDS | 13399686 | 13399775 | 13399686 | ID=MsG0680031055.01.T01:cds;Parent=MsG0680031055.01.T01 |
| Chr6 | CDS | 13398784 | 13399049 | 13398784 | ID=MsG0680031055.01.T01:cds;Parent=MsG0680031055.01.T01 |
| Chr6 | CDS | 13398188 | 13398698 | 13398188 | ID=MsG0680031055.01.T01:cds;Parent=MsG0680031055.01.T01 |
| Chr6 | CDS | 13397798 | 13398101 | 13397798 | ID=MsG0680031055.01.T01:cds;Parent=MsG0680031055.01.T01 |
| Chr6 | CDS | 13397361 | 13397669 | 13397361 | ID=MsG0680031055.01.T01:cds;Parent=MsG0680031055.01.T01 |
| Chr6 | CDS | 13396787 | 13397268 | 13396787 | ID=MsG0680031055.01.T01:cds;Parent=MsG0680031055.01.T01 |
| Chr6 | three_prime_UTR | 13396580 | 13396786 | 13396580 | ID=MsG0680031055.01.T01:three_prime_utr;Parent=MsG0680031055.01.T01 |
| Gene Sequence |
| Protein sequence |
