AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040144.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040144.01.T01 MTR_7g085260 73.077 364 30 5 11 306 20 383 0.0 506
MsG0780040144.01.T01 MTR_6g032770 46.721 366 114 17 11 306 21 375 8.70e-76 237
MsG0780040144.01.T01 MTR_4g108760 35.411 353 158 14 11 306 20 359 5.22e-39 140
MsG0780040144.01.T01 MTR_6g012670 42.714 199 68 5 12 171 24 215 9.66e-38 136
MsG0780040144.01.T01 MTR_3g435150 44.041 193 65 6 11 163 19 208 1.23e-36 133
MsG0780040144.01.T01 MTR_6g084430 45.455 154 49 3 12 130 9 162 2.49e-33 125
MsG0780040144.01.T01 MTR_2g078700 43.871 155 46 3 7 120 22 176 3.53e-32 123
MsG0780040144.01.T01 MTR_1g008740 43.293 164 53 5 11 134 16 179 1.67e-30 118
MsG0780040144.01.T01 MTR_7g011130 30.556 360 153 11 13 306 24 352 2.07e-30 117
MsG0780040144.01.T01 MTR_1g008740 43.293 164 53 5 11 134 30 193 2.49e-30 117
MsG0780040144.01.T01 MTR_3g070030 33.871 310 146 13 12 273 23 321 6.46e-30 116
MsG0780040144.01.T01 MTR_3g109340 34.043 235 104 7 11 198 25 255 8.43e-30 116
MsG0780040144.01.T01 MTR_3g109340 33.475 236 105 7 11 198 25 256 3.85e-29 114
MsG0780040144.01.T01 MTR_3g116070 38.983 177 78 7 12 158 27 203 4.68e-26 106
MsG0780040144.01.T01 MTR_7g011120 30.588 340 148 11 13 306 13 310 1.90e-24 100
MsG0780040144.01.T01 MTR_2g064470 31.967 244 99 10 11 210 14 234 8.82e-24 99.0
MsG0780040144.01.T01 MTR_3g070040 32.222 270 133 9 12 237 12 275 5.49e-23 97.4
MsG0780040144.01.T01 MTR_2g079990 31.837 245 107 6 11 206 19 252 2.22e-22 95.9
MsG0780040144.01.T01 MTR_7g085220 51.724 87 41 1 12 97 12 98 1.85e-21 93.2
MsG0780040144.01.T01 MTR_2g080010 42.308 104 59 1 11 113 18 121 2.18e-20 90.5
MsG0780040144.01.T01 MTR_2157s0010 35.135 148 72 4 12 136 12 158 2.93e-20 88.6
MsG0780040144.01.T01 MTR_5g041940 38.983 118 57 2 11 113 6 123 3.92e-20 88.2
MsG0780040144.01.T01 MTR_4g089135 37.903 124 60 2 7 113 14 137 6.84e-20 89.0
MsG0780040144.01.T01 MTR_8g059170 37.267 161 60 4 11 130 17 177 8.02e-20 88.6
MsG0780040144.01.T01 MTR_2g064090 36.975 119 58 2 12 113 10 128 1.05e-19 88.2
MsG0780040144.01.T01 MTR_1g069805 29.412 204 109 7 11 209 13 186 1.12e-19 87.0
MsG0780040144.01.T01 MTR_2g093810 35.211 142 74 3 12 136 18 158 1.89e-19 87.4
MsG0780040144.01.T01 MTR_2g079990 48.936 94 47 1 11 103 19 112 2.16e-19 87.8
MsG0780040144.01.T01 MTR_3g088110 35.065 154 61 3 11 125 10 163 2.55e-19 86.3
MsG0780040144.01.T01 MTR_5g040420 37.931 145 74 3 12 155 18 147 3.71e-19 87.4
MsG0780040144.01.T01 MTR_5g076850 45.556 90 46 1 11 97 9 98 4.61e-19 87.8
MsG0780040144.01.T01 MTR_4g035590 39.189 148 49 5 11 119 11 156 6.32e-19 86.3
MsG0780040144.01.T01 MTR_6g477900 29.586 169 77 4 11 137 9 177 6.71e-19 84.3
MsG0780040144.01.T01 MTR_5g090970 48.315 89 45 1 11 98 21 109 8.17e-19 85.5
MsG0780040144.01.T01 MTR_3g064580 34.591 159 63 5 11 129 9 166 8.56e-19 87.0
MsG0780040144.01.T01 MTR_4g081870 38.136 118 58 2 11 113 12 129 1.01e-18 84.3
MsG0780040144.01.T01 MTR_7g100990 39.496 119 55 2 12 113 15 133 1.24e-18 85.1
MsG0780040144.01.T01 MTR_8g467490 35.294 119 60 2 12 113 18 136 2.81e-18 84.7
MsG0780040144.01.T01 MTR_2g068880 45.833 96 50 2 11 104 25 120 3.09e-18 84.0
MsG0780040144.01.T01 MTR_7g097090 34.507 142 82 2 11 151 13 144 3.23e-18 83.6
MsG0780040144.01.T01 MTR_3g096140 36.054 147 70 5 11 135 10 154 3.79e-18 82.8
MsG0780040144.01.T01 MTR_4g101680 36.250 160 59 6 7 125 6 163 3.80e-18 84.0
MsG0780040144.01.T01 MTR_2g068920 45.833 96 50 2 11 104 24 119 4.06e-18 83.2
MsG0780040144.01.T01 MTR_7g005280 48.276 87 43 1 11 97 18 102 4.67e-18 82.4
MsG0780040144.01.T01 MTR_6g011860 35.593 118 60 2 12 113 19 136 4.78e-18 84.0
MsG0780040144.01.T01 MTR_2g062730 45.263 95 44 3 11 99 13 105 5.14e-18 83.6
MsG0780040144.01.T01 MTR_3g096140 36.054 147 70 5 11 135 10 154 5.87e-18 83.6
MsG0780040144.01.T01 MTR_8g076110 29.787 235 128 9 12 239 10 214 6.08e-18 82.8
MsG0780040144.01.T01 MTR_5g012080 28.514 249 121 9 12 213 11 249 6.16e-18 83.6
MsG0780040144.01.T01 MTR_4g134460 32.934 167 86 6 11 155 57 219 1.22e-17 83.2
MsG0780040144.01.T01 MTR_5g021710 43.299 97 47 3 12 102 12 106 1.51e-17 82.4
MsG0780040144.01.T01 MTR_8g024480 44.898 98 46 3 11 102 18 113 1.93e-17 82.4
MsG0780040144.01.T01 MTR_8g094580 32.258 155 65 3 11 125 10 164 2.89e-17 80.5
MsG0780040144.01.T01 MTR_4g036030 33.987 153 59 5 7 119 6 156 5.71e-17 80.5
MsG0780040144.01.T01 MTR_3g096920 31.818 154 66 3 11 125 10 163 7.20e-17 79.7
MsG0780040144.01.T01 MTR_1g096430 30.769 143 77 4 11 133 10 150 7.33e-17 80.1
MsG0780040144.01.T01 MTR_5g090970 47.191 89 45 2 11 98 21 108 1.39e-16 79.0
MsG0780040144.01.T01 MTR_1g090720 41.935 93 49 2 11 99 45 136 1.77e-16 80.1
MsG0780040144.01.T01 MTR_3g096920 35.714 126 67 2 11 122 10 135 2.35e-16 78.6
MsG0780040144.01.T01 MTR_2g086880 36.441 118 59 2 12 113 22 139 6.55e-16 78.6
MsG0780040144.01.T01 MTR_2g086880 36.441 118 59 2 12 113 22 139 7.52e-16 78.2
MsG0780040144.01.T01 MTR_4g098630 38.542 96 56 1 12 104 10 105 1.07e-15 76.6
MsG0780040144.01.T01 MTR_8g063550 38.211 123 53 4 11 113 9 128 2.18e-15 76.6
MsG0780040144.01.T01 MTR_8g063550 38.211 123 53 4 11 113 9 128 2.32e-15 76.6
MsG0780040144.01.T01 MTR_8g063550 38.211 123 53 4 11 113 9 128 2.52e-15 75.9
MsG0780040144.01.T01 MTR_5g014300 41.111 90 50 1 11 97 9 98 2.57e-15 75.9
MsG0780040144.01.T01 MTR_1g097300 40.000 95 54 2 11 102 22 116 1.00e-14 74.7
MsG0780040144.01.T01 MTR_1g090723 35.156 128 61 5 6 113 6 131 3.49e-14 73.2
MsG0780040144.01.T01 MTR_1g090723 35.156 128 61 5 6 113 6 131 3.62e-14 73.2
MsG0780040144.01.T01 MTR_1g090723 35.156 128 61 5 6 113 6 131 4.21e-14 73.2
MsG0780040144.01.T01 MTR_8g093580 35.772 123 56 4 11 113 9 128 7.27e-14 72.0
MsG0780040144.01.T01 MTR_5g069030 42.222 90 47 2 12 97 29 117 6.42e-13 69.3
MsG0780040144.01.T01 MTR_3g093050 41.111 90 50 1 11 97 25 114 6.83e-13 69.3
MsG0780040144.01.T01 MTR_4g075980 33.058 121 63 2 11 113 18 138 8.19e-13 68.2
MsG0780040144.01.T01 MTR_3g093050 41.111 90 50 1 11 97 25 114 8.54e-13 68.9
MsG0780040144.01.T01 MTR_8g099750 39.080 87 52 1 11 97 17 102 9.44e-13 67.0
MsG0780040144.01.T01 MTR_8g023840 38.542 96 55 2 12 103 15 110 9.98e-13 68.6
MsG0780040144.01.T01 MTR_8g023900 38.144 97 52 3 11 101 15 109 2.14e-12 67.8
MsG0780040144.01.T01 MTR_3g098810 42.169 83 45 2 11 92 17 97 9.43e-12 63.2
MsG0780040144.01.T01 MTR_0036s0150 33.594 128 61 5 7 113 4 128 9.74e-12 65.9
MsG0780040144.01.T01 MTR_3g098810 42.169 83 45 2 11 92 17 97 1.50e-11 63.5
MsG0780040144.01.T01 MTR_3g093040 40.217 92 48 2 11 97 111 200 1.97e-11 63.9
MsG0780040144.01.T01 MTR_3g096140 33.835 133 64 5 25 135 3 133 8.54e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040144.01.T01 AT5G18270 36.723 354 124 13 11 306 24 335 9.74e-50 168
MsG0780040144.01.T01 AT5G18270 36.723 354 124 13 11 306 24 335 2.80e-49 167
MsG0780040144.01.T01 AT3G04060 35.860 343 140 11 11 305 23 333 6.22e-46 158
MsG0780040144.01.T01 AT5G61430 35.838 346 144 10 11 306 19 336 3.59e-44 154
MsG0780040144.01.T01 AT5G07680 35.260 346 138 11 11 306 6 315 7.58e-43 150
MsG0780040144.01.T01 AT5G07680 35.260 346 138 11 11 306 20 329 8.54e-43 150
MsG0780040144.01.T01 AT5G39610 43.523 193 63 5 11 164 23 208 6.85e-35 128
MsG0780040144.01.T01 AT3G29035 43.784 185 48 4 11 156 27 194 1.95e-34 127
MsG0780040144.01.T01 AT5G53950 42.767 159 50 3 12 129 21 179 6.17e-31 119
MsG0780040144.01.T01 AT3G18400 44.000 150 48 3 12 125 9 158 6.34e-31 118
MsG0780040144.01.T01 AT1G56010 32.549 255 109 9 11 223 22 255 1.04e-28 112
MsG0780040144.01.T01 AT3G15170 56.566 99 40 2 11 108 23 119 3.37e-28 111
MsG0780040144.01.T01 AT1G76420 33.058 242 103 8 11 198 25 261 1.03e-27 110
MsG0780040144.01.T01 AT2G24430 31.559 263 117 7 11 215 19 276 2.29e-27 108
MsG0780040144.01.T01 AT2G24430 31.559 263 117 7 11 215 19 276 2.29e-27 108
MsG0780040144.01.T01 AT3G12977 34.000 150 61 3 11 122 21 170 8.69e-24 98.6
MsG0780040144.01.T01 AT5G04410 40.000 145 67 3 11 135 12 156 1.72e-22 97.8
MsG0780040144.01.T01 AT5G61430 31.667 300 127 10 57 306 2 273 4.66e-22 93.6
MsG0780040144.01.T01 AT3G04070 43.220 118 54 2 12 128 14 119 2.81e-21 92.8
MsG0780040144.01.T01 AT3G04070 43.220 118 54 2 12 128 14 119 3.29e-21 92.8
MsG0780040144.01.T01 AT4G28530 39.231 130 57 4 11 122 13 138 4.41e-21 91.7
MsG0780040144.01.T01 AT4G27410 33.846 195 79 6 11 157 17 209 5.53e-21 91.3
MsG0780040144.01.T01 AT5G17260 38.333 120 57 2 11 113 9 128 3.54e-20 90.9
MsG0780040144.01.T01 AT1G61110 37.342 158 77 6 7 144 15 170 4.49e-20 89.0
MsG0780040144.01.T01 AT1G54330 34.000 150 63 3 12 125 10 159 5.27e-20 88.6
MsG0780040144.01.T01 AT3G10500 36.765 136 67 3 11 128 12 146 5.52e-20 90.5
MsG0780040144.01.T01 AT3G03200 37.815 119 57 2 12 113 10 128 8.66e-20 89.7
MsG0780040144.01.T01 AT3G15510 37.815 119 57 2 12 113 21 139 1.01e-19 88.6
MsG0780040144.01.T01 AT3G17730 33.103 145 77 3 11 135 9 153 1.07e-19 86.7
MsG0780040144.01.T01 AT3G15500 35.526 152 61 2 11 125 17 168 1.30e-19 87.8
MsG0780040144.01.T01 AT1G65910 37.500 120 58 2 11 113 9 128 2.33e-19 89.0
MsG0780040144.01.T01 AT1G52880 33.553 152 80 3 12 144 21 170 3.88e-19 86.7
MsG0780040144.01.T01 AT1G52890 34.591 159 67 3 11 132 17 175 6.58e-19 85.9
MsG0780040144.01.T01 AT5G08790 37.302 126 65 2 11 122 10 135 7.96e-19 85.1
MsG0780040144.01.T01 AT1G33280 37.838 148 51 5 11 119 11 156 8.68e-19 85.1
MsG0780040144.01.T01 AT4G10350 35.882 170 63 6 11 138 12 177 9.79e-19 85.5
MsG0780040144.01.T01 AT2G43000 46.067 89 47 1 11 98 21 109 1.10e-18 84.3
MsG0780040144.01.T01 AT1G26870 36.975 119 58 2 12 113 20 138 1.55e-18 85.9
MsG0780040144.01.T01 AT1G77450 33.766 154 63 4 11 125 13 166 2.07e-18 83.2
MsG0780040144.01.T01 AT3G10480 36.667 150 54 5 11 120 30 178 2.91e-18 85.1
MsG0780040144.01.T01 AT5G39820 46.591 88 46 1 12 98 24 111 3.04e-18 84.3
MsG0780040144.01.T01 AT1G69490 37.288 118 59 2 11 113 12 129 3.14e-18 83.2
MsG0780040144.01.T01 AT5G64060 38.333 120 57 2 11 113 9 128 3.19e-18 84.3
MsG0780040144.01.T01 AT2G02450 36.111 144 71 5 11 135 54 195 4.72e-18 84.3
MsG0780040144.01.T01 AT2G02450 36.111 144 71 5 11 135 54 195 5.82e-18 84.0
MsG0780040144.01.T01 AT5G13180 48.864 88 41 2 11 97 17 101 1.32e-17 80.9
MsG0780040144.01.T01 AT3G10490 31.818 176 91 6 11 161 30 201 2.33e-17 80.1
MsG0780040144.01.T01 AT1G01720 46.591 88 46 1 11 97 10 97 2.59e-17 80.9
MsG0780040144.01.T01 AT2G33480 39.831 118 53 3 11 113 18 132 2.90e-17 80.5
MsG0780040144.01.T01 AT5G63790 35.714 126 67 2 11 122 63 188 3.04e-17 81.3
MsG0780040144.01.T01 AT5G66300 31.122 196 86 7 12 163 16 206 3.09e-17 80.9
MsG0780040144.01.T01 AT2G33480 39.831 118 53 3 11 113 18 132 3.14e-17 80.1
MsG0780040144.01.T01 AT3G10480 35.762 151 55 5 11 120 30 179 3.15e-17 82.0
MsG0780040144.01.T01 AT1G71930 33.824 136 68 4 12 127 13 146 3.29e-17 81.3
MsG0780040144.01.T01 AT1G71930 33.824 136 68 4 12 127 13 146 3.29e-17 81.3
MsG0780040144.01.T01 AT5G63790 35.714 126 67 2 11 122 53 178 3.67e-17 80.9
MsG0780040144.01.T01 AT4G36160 42.857 98 48 3 11 102 13 108 4.18e-17 81.3
MsG0780040144.01.T01 AT4G36160 42.857 98 48 3 11 102 13 108 4.18e-17 81.3
MsG0780040144.01.T01 AT4G27410 31.132 212 79 7 11 157 17 226 4.34e-17 80.5
MsG0780040144.01.T01 AT4G36160 42.857 98 48 3 11 102 17 112 4.54e-17 81.3
MsG0780040144.01.T01 AT4G28530 32.919 161 81 3 11 154 13 163 7.11e-17 80.5
MsG0780040144.01.T01 AT2G18060 41.837 98 49 3 11 102 12 107 7.53e-17 80.5
MsG0780040144.01.T01 AT2G18060 41.837 98 49 3 11 102 12 107 7.53e-17 80.5
MsG0780040144.01.T01 AT3G10490 33.775 151 58 4 11 120 30 179 1.53e-16 80.1
MsG0780040144.01.T01 AT1G12260 36.486 148 52 6 12 119 11 156 1.69e-16 79.7
MsG0780040144.01.T01 AT5G09330 37.500 120 58 3 11 113 9 128 1.86e-16 80.1
MsG0780040144.01.T01 AT5G09330 37.500 120 58 3 11 113 9 128 1.86e-16 80.1
MsG0780040144.01.T01 AT5G09330 37.500 120 58 3 11 113 9 128 1.86e-16 80.1
MsG0780040144.01.T01 AT5G09330 37.500 120 58 3 11 113 9 128 1.86e-16 80.1
MsG0780040144.01.T01 AT5G09330 37.500 120 58 3 11 113 9 128 1.86e-16 80.1
MsG0780040144.01.T01 AT1G12260 36.242 149 53 6 11 119 10 156 2.06e-16 79.0
MsG0780040144.01.T01 AT2G27300 34.454 119 62 2 11 113 17 135 2.65e-16 78.6
MsG0780040144.01.T01 AT3G61910 43.299 97 47 3 11 101 14 108 2.68e-16 78.6
MsG0780040144.01.T01 AT2G46770 41.837 98 49 3 11 102 19 114 4.49e-16 78.2
MsG0780040144.01.T01 AT4G17980 42.391 92 50 1 12 100 10 101 5.79e-16 76.6
MsG0780040144.01.T01 AT4G17980 42.391 92 50 1 12 100 10 101 5.98e-16 77.0
MsG0780040144.01.T01 AT2G17040 38.614 101 61 1 8 107 6 106 9.99e-16 76.3
MsG0780040144.01.T01 AT1G79580 42.553 94 46 3 11 98 20 111 1.86e-15 76.6
MsG0780040144.01.T01 AT1G79580 42.553 94 46 3 11 98 20 111 1.86e-15 76.6
MsG0780040144.01.T01 AT1G79580 42.553 94 46 3 11 98 20 111 1.86e-15 76.6
MsG0780040144.01.T01 AT1G79580 42.553 94 46 3 11 98 20 111 1.86e-15 76.6
MsG0780040144.01.T01 AT1G79580 42.553 94 46 3 11 98 20 111 1.86e-15 76.6
MsG0780040144.01.T01 AT1G32770 43.011 93 45 3 11 97 19 109 2.54e-15 75.9
MsG0780040144.01.T01 AT5G46590 40.000 90 51 1 11 97 9 98 4.23e-15 74.3
MsG0780040144.01.T01 AT1G34180 43.333 90 48 2 11 97 19 108 4.48e-15 75.9
MsG0780040144.01.T01 AT3G12910 43.617 94 49 3 11 101 24 116 4.99e-15 74.7
MsG0780040144.01.T01 AT1G34180 43.333 90 48 2 11 97 19 108 5.16e-15 75.9
MsG0780040144.01.T01 AT5G46590 40.000 90 51 1 11 97 9 98 6.32e-15 74.3
MsG0780040144.01.T01 AT1G34190 38.947 95 55 2 11 102 19 113 6.40e-15 75.5
MsG0780040144.01.T01 AT1G62700 43.011 93 45 3 12 98 11 101 8.65e-15 74.7
MsG0780040144.01.T01 AT1G62700 43.011 93 45 3 12 98 11 101 8.65e-15 74.7
MsG0780040144.01.T01 AT5G62380 42.553 94 50 2 11 100 10 103 1.27e-14 73.9
MsG0780040144.01.T01 AT5G62380 42.553 94 50 2 11 100 10 103 1.27e-14 73.9
MsG0780040144.01.T01 AT1G33060 30.488 164 75 4 12 136 28 191 2.60e-14 73.9
MsG0780040144.01.T01 AT1G33060 30.488 164 75 4 12 136 28 191 2.61e-14 73.9
MsG0780040144.01.T01 AT3G49530 35.246 122 57 3 12 113 17 136 5.59e-14 72.4
MsG0780040144.01.T01 AT4G35580 40.860 93 52 1 11 100 12 104 9.81e-14 72.0
MsG0780040144.01.T01 AT4G35580 40.860 93 52 1 11 100 12 104 1.23e-13 71.6
MsG0780040144.01.T01 AT4G35580 40.860 93 52 1 11 100 12 104 1.26e-13 71.6
MsG0780040144.01.T01 AT3G49530 35.246 122 57 3 12 113 17 136 1.29e-13 71.2
MsG0780040144.01.T01 AT1G32870 42.241 116 51 5 11 120 13 118 1.40e-13 71.2
MsG0780040144.01.T01 AT1G32870 42.241 116 51 5 11 120 13 118 1.50e-13 71.2
MsG0780040144.01.T01 AT1G32870 42.241 116 51 5 11 120 49 154 1.89e-13 71.2
MsG0780040144.01.T01 AT1G34180 38.235 102 48 2 11 97 19 120 1.97e-13 70.9
MsG0780040144.01.T01 AT1G34180 38.235 102 48 2 11 97 19 120 2.26e-13 70.9
MsG0780040144.01.T01 AT1G32510 40.000 90 51 1 11 97 9 98 2.81e-13 69.3
MsG0780040144.01.T01 AT3G44290 32.773 119 64 2 11 113 17 135 5.44e-13 67.8
MsG0780040144.01.T01 AT3G44290 33.051 118 63 2 12 113 18 135 8.38e-13 68.6
MsG0780040144.01.T01 AT5G22290 31.356 118 65 2 12 113 25 142 3.54e-12 66.6
MsG0780040144.01.T01 AT5G24590 43.956 91 44 3 12 97 17 105 4.01e-12 67.0
MsG0780040144.01.T01 AT5G04395 30.597 134 62 3 11 113 31 164 5.73e-12 63.9
MsG0780040144.01.T01 AT5G64530 36.364 88 49 1 11 98 6 86 5.31e-11 60.5

Find 59 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATGCCAACAAGTGTTTA+TGG 0.158620 7:+73662848 MsG0780040144.01.T01:CDS
AGTAGTTCAAGTTTGGATTT+TGG 0.186129 7:-73662799 None:intergenic
ACTACTTTATGTATCAAAAT+AGG 0.259873 7:+73662816 MsG0780040144.01.T01:CDS
TCTTCATACCAACAAGGTTC+TGG 0.292340 7:-73661924 None:intergenic
TACATAAAGTAGTTCAAGTT+TGG 0.294780 7:-73662806 None:intergenic
GATGATCATAGTTGATTCTA+TGG 0.301071 7:-73662676 None:intergenic
AGTTGCACCTCTCTCAGATT+TGG 0.314330 7:+73663021 MsG0780040144.01.T01:CDS
AACTAGACATGGAAAGGAAT+AGG 0.341443 7:+73662966 MsG0780040144.01.T01:CDS
GAGCAACTGAATCTGGTTAC+TGG 0.349949 7:+73661855 MsG0780040144.01.T01:CDS
ATGAATATCATGAGAGAAAC+AGG 0.359565 7:+73660336 MsG0780040144.01.T01:CDS
GTTGAACCATAAACACTTGT+TGG 0.369330 7:-73662854 None:intergenic
AACAATAGAGCAACTGAATC+TGG 0.372019 7:+73661848 MsG0780040144.01.T01:CDS
AAATTCAGTGCAACTGCTAT+TGG 0.394008 7:+73661557 MsG0780040144.01.T01:CDS
TGAGACCTGTATCTTGTGAT+TGG 0.394390 7:-73662916 None:intergenic
TTGTTATTGTGTAGGATGAA+TGG 0.403338 7:+73662385 MsG0780040144.01.T01:intron
TGTTATTGTGTAGGATGAAT+GGG 0.421686 7:+73662386 MsG0780040144.01.T01:intron
TTACACAAATGATGAATTCA+AGG 0.424939 7:+73662542 MsG0780040144.01.T01:CDS
AATTCATCATTTGTGTAAGA+AGG 0.426182 7:-73662537 None:intergenic
TTCTTCACTTCCACCTCTCA+TGG 0.435878 7:+73662512 MsG0780040144.01.T01:CDS
GAGATTTGATTGGTTGGAAA+TGG 0.436083 7:-73662732 None:intergenic
ACTAGACATGGAAAGGAATA+GGG 0.439010 7:+73662967 MsG0780040144.01.T01:CDS
AAAAGACCAGAAGAAATTTG+AGG 0.442270 7:-73662450 None:intergenic
GTTGTTGAGATTTGATTGGT+TGG 0.457220 7:-73662738 None:intergenic
AAAGGAATCCAGAACCTTGT+TGG 0.469626 7:+73661916 MsG0780040144.01.T01:CDS
TCTATTGTTCTCATACCTGT+TGG 0.473887 7:-73661834 None:intergenic
AAATGCAGAGAAAGCAAAGA+TGG 0.474276 7:+73661769 MsG0780040144.01.T01:intron
TGTTTGTTATCTCACTGAAA+AGG 0.477354 7:+73661523 MsG0780040144.01.T01:CDS
TTTGAACAAGTGTGAACCTT+GGG 0.484109 7:+73661589 MsG0780040144.01.T01:CDS
TCAAACCAATCACAAGATAC+AGG 0.493243 7:+73662911 MsG0780040144.01.T01:CDS
GAAAGATAGAAATATCCAAC+AGG 0.497928 7:+73661819 MsG0780040144.01.T01:CDS
TCTGGTTACTGGAAAGCTAC+AGG 0.498363 7:+73661866 MsG0780040144.01.T01:CDS
GTGGGTTGTTGAGATTTGAT+TGG 0.500225 7:-73662742 None:intergenic
GAAGTGTAGTTCATCATGGT+TGG 0.509242 7:-73662710 None:intergenic
GGATGAATGGGTTGTGTCAA+GGG 0.511195 7:+73662398 MsG0780040144.01.T01:intron
GAGAGAGGTGCAACTGATGA+AGG 0.515723 7:-73663013 None:intergenic
ACCATAAACACTTGTTGGCA+TGG 0.518988 7:-73662849 None:intergenic
TCAAATCTCAACAACCCACT+TGG 0.533355 7:+73662746 MsG0780040144.01.T01:CDS
TTATCTCAGCATCTGTTGGA+TGG 0.533789 7:-73661499 None:intergenic
ACAATTATCTCAGCATCTGT+TGG 0.534890 7:-73661503 None:intergenic
TATCAAAACTAGACATGGAA+AGG 0.546823 7:+73662960 MsG0780040144.01.T01:CDS
GTGAGAGTGTGTTTCCAAGT+GGG 0.560776 7:-73662760 None:intergenic
GCAAAGATGGGAGAGAAGAA+TGG 0.562532 7:+73661782 MsG0780040144.01.T01:CDS
TACACAAATGATGAATTCAA+GGG 0.563342 7:+73662543 MsG0780040144.01.T01:CDS
AACTAAGAATAATGAGTGCA+AGG 0.563943 7:+73662874 MsG0780040144.01.T01:CDS
AACTTACTTGGTAAATCCCA+AGG 0.565147 7:-73661605 None:intergenic
GCATTGTATGATGATCTTGA+AGG 0.568104 7:+73662989 MsG0780040144.01.T01:CDS
AGGATGAATGGGTTGTGTCA+AGG 0.568459 7:+73662397 MsG0780040144.01.T01:intron
AGCTGTATCAAAACTAGACA+TGG 0.580538 7:+73662955 MsG0780040144.01.T01:CDS
AATGCAGAGAAAGCAAAGAT+GGG 0.604056 7:+73661770 MsG0780040144.01.T01:intron
AGAGATTTATCACAAAGGAA+AGG 0.611956 7:+73661898 MsG0780040144.01.T01:CDS
ATTTGAACAAGTGTGAACCT+TGG 0.620030 7:+73661588 MsG0780040144.01.T01:CDS
TAAGAAGGATCCATGAGAGG+TGG 0.627347 7:-73662522 None:intergenic
GACAAAGAGATTTATCACAA+AGG 0.634154 7:+73661893 MsG0780040144.01.T01:CDS
AATGGAAGTGTAGTTCATCA+TGG 0.641352 7:-73662714 None:intergenic
AAACTATCCAAATCTGAGAG+AGG 0.646356 7:-73663028 None:intergenic
TGTGAGAGTGTGTTTCCAAG+TGG 0.649310 7:-73662761 None:intergenic
GTGTAAGAAGGATCCATGAG+AGG 0.664920 7:-73662525 None:intergenic
GAGTCTTCTTCATACCAACA+AGG 0.697898 7:-73661930 None:intergenic
TAAGAATAATGAGTGCAAGG+TGG 0.699474 7:+73662877 MsG0780040144.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATATAAGAAAAAGTA+GGG + Chr7:73660431-73660450 MsG0780040144.01.T01:intron 10.0%
!!! TTTTTAATATAAGAAAAAGT+AGG + Chr7:73660430-73660449 MsG0780040144.01.T01:intron 10.0%
!! AAAAACCATATATCATTAAA+AGG - Chr7:73662330-73662349 None:intergenic 15.0%
!! TTGTGTGTAAAAAAAAAAAA+TGG + Chr7:73661413-73661432 MsG0780040144.01.T01:intron 15.0%
!! TTTAATATAAGAAAAAGTAG+GGG + Chr7:73660432-73660451 MsG0780040144.01.T01:intron 15.0%
!!! ATCAATTTGCTTTTTATATA+TGG - Chr7:73662149-73662168 None:intergenic 15.0%
!! ACTACTTTATGTATCAAAAT+AGG + Chr7:73662816-73662835 MsG0780040144.01.T01:CDS 20.0%
!! ATGATCAAGATTGATTATAA+CGG + Chr7:73661023-73661042 MsG0780040144.01.T01:intron 20.0%
!! TAACAACAATAAAACTTACT+TGG - Chr7:73661620-73661639 None:intergenic 20.0%
!! TGAAAAAATGTGAAAATGTT+AGG + Chr7:73660362-73660381 MsG0780040144.01.T01:intron 20.0%
!! TTAATATAAGAAAAAGTAGG+GGG + Chr7:73660433-73660452 MsG0780040144.01.T01:intron 20.0%
!!! TAGTTCCTTTTAATGATATA+TGG + Chr7:73662322-73662341 MsG0780040144.01.T01:intron 20.0%
!!! TTGTTTTTTTGTTATTGTGT+AGG + Chr7:73662377-73662396 MsG0780040144.01.T01:intron 20.0%
!!! TTTTTTTTTACACACAACAA+AGG - Chr7:73661410-73661429 None:intergenic 20.0%
! AAAAAACCTCAAATTTCTTC+TGG + Chr7:73662444-73662463 MsG0780040144.01.T01:CDS 25.0%
! AAAAGGAGAAAAGACTAATT+GGG + Chr7:73661978-73661997 MsG0780040144.01.T01:intron 25.0%
! AATTCATCATTTGTGTAAGA+AGG - Chr7:73662540-73662559 None:intergenic 25.0%
! ATAGAGATTGAATTCAATCA+TGG + Chr7:73662207-73662226 MsG0780040144.01.T01:intron 25.0%
! ATATAATAACCCATGTGATT+CGG + Chr7:73660658-73660677 MsG0780040144.01.T01:intron 25.0%
! ATCTTTCACAACAAAACAAA+AGG - Chr7:73661372-73661391 None:intergenic 25.0%
! ATTCTATGGTAATTATCTTC+TGG - Chr7:73662665-73662684 None:intergenic 25.0%
! GAAAAGAAATGGTAAAAAAG+AGG - Chr7:73660502-73660521 None:intergenic 25.0%
! TACACAAATGATGAATTCAA+GGG + Chr7:73662543-73662562 MsG0780040144.01.T01:CDS 25.0%
! TACCATATGTTTCAATTTGA+TGG - Chr7:73660945-73660964 None:intergenic 25.0%
! TGATCAAGATTGATTATAAC+GGG + Chr7:73661024-73661043 MsG0780040144.01.T01:intron 25.0%
! TTACACAAATGATGAATTCA+AGG + Chr7:73662542-73662561 MsG0780040144.01.T01:CDS 25.0%
! TTATGACGTATGATGTATAT+GGG - Chr7:73660568-73660587 None:intergenic 25.0%
! TTGAAACATATGGTAAAGAT+TGG + Chr7:73660950-73660969 MsG0780040144.01.T01:intron 25.0%
! TTTATGACGTATGATGTATA+TGG - Chr7:73660569-73660588 None:intergenic 25.0%
!! TACATAAAGTAGTTCAAGTT+TGG - Chr7:73662809-73662828 None:intergenic 25.0%
!! TTGATGTTGATTATTGTTGA+TGG - Chr7:73662630-73662649 None:intergenic 25.0%
!!! AAATCCTTGATAATTTTCCT+CGG + Chr7:73661069-73661088 MsG0780040144.01.T01:intron 25.0%
!!! AAATTTCTTCTGGTCTTTTA+AGG + Chr7:73662454-73662473 MsG0780040144.01.T01:CDS 25.0%
!!! ATTTTGATGGAATTGTTGAT+TGG - Chr7:73662574-73662593 None:intergenic 25.0%
!!! CTTTTAAGGATAAACTCAAT+TGG + Chr7:73662468-73662487 MsG0780040144.01.T01:CDS 25.0%
!!! GATCTCTTTTAACTTAATTG+CGG + Chr7:73660695-73660714 MsG0780040144.01.T01:intron 25.0%
AAAAGACCAGAAGAAATTTG+AGG - Chr7:73662453-73662472 None:intergenic 30.0%
AACTAAGAATAATGAGTGCA+AGG + Chr7:73662874-73662893 MsG0780040144.01.T01:CDS 30.0%
AAGACTCTTGTGTTCTATAA+AGG + Chr7:73661946-73661965 MsG0780040144.01.T01:intron 30.0%
AAGATGACGAGTTTATATAG+AGG - Chr7:73661217-73661236 None:intergenic 30.0%
AGAGATTTATCACAAAGGAA+AGG + Chr7:73661898-73661917 MsG0780040144.01.T01:CDS 30.0%
ATGAATATCATGAGAGAAAC+AGG + Chr7:73660336-73660355 MsG0780040144.01.T01:CDS 30.0%
CAAAAGGAGAAAAGACTAAT+TGG + Chr7:73661977-73661996 MsG0780040144.01.T01:intron 30.0%
GAAAGATAGAAATATCCAAC+AGG + Chr7:73661819-73661838 MsG0780040144.01.T01:CDS 30.0%
GACAAAGAGATTTATCACAA+AGG + Chr7:73661893-73661912 MsG0780040144.01.T01:CDS 30.0%
GAGGAAAATTATCAAGGATT+TGG - Chr7:73661070-73661089 None:intergenic 30.0%
TAATCTCCCTAACAAAGAAA+AGG + Chr7:73662041-73662060 MsG0780040144.01.T01:intron 30.0%
TATAATAACCCATGTGATTC+GGG + Chr7:73660659-73660678 MsG0780040144.01.T01:intron 30.0%
TATAATAATCCACGTGATTC+TGG + Chr7:73660780-73660799 MsG0780040144.01.T01:intron 30.0%
TATCAAAACTAGACATGGAA+AGG + Chr7:73662960-73662979 MsG0780040144.01.T01:CDS 30.0%
TCACCTTTGTTAACAACAAT+TGG - Chr7:73661444-73661463 None:intergenic 30.0%
TGTTATTGTGTAGGATGAAT+GGG + Chr7:73662386-73662405 MsG0780040144.01.T01:intron 30.0%
TTGATATACGTGTATTCGAT+TGG - Chr7:73660592-73660611 None:intergenic 30.0%
! AGTAGTCACTTTCTAAAAAG+TGG - Chr7:73662268-73662287 None:intergenic 30.0%
! CACTTTCTAAAAAGTGGTAA+AGG - Chr7:73662262-73662281 None:intergenic 30.0%
! CTCAGATTTGGATAGTTTTT+GGG + Chr7:73663033-73663052 MsG0780040144.01.T01:CDS 30.0%
! GAACCAATTGTTGTTAACAA+AGG + Chr7:73661438-73661457 MsG0780040144.01.T01:intron 30.0%
! GATGATCATAGTTGATTCTA+TGG - Chr7:73662679-73662698 None:intergenic 30.0%
! TCAAGTTTGGATTTTGGATT+CGG - Chr7:73662796-73662815 None:intergenic 30.0%
! TCTCAGATTTGGATAGTTTT+TGG + Chr7:73663032-73663051 MsG0780040144.01.T01:CDS 30.0%
! TTGTTATTGTGTAGGATGAA+TGG + Chr7:73662385-73662404 MsG0780040144.01.T01:intron 30.0%
!! AGTAGTTCAAGTTTGGATTT+TGG - Chr7:73662802-73662821 None:intergenic 30.0%
!! TGTTTGTTATCTCACTGAAA+AGG + Chr7:73661523-73661542 MsG0780040144.01.T01:CDS 30.0%
!!! CAATTAGTCTTTTCTCCTTT+TGG - Chr7:73661979-73661998 None:intergenic 30.0%
!!! TCATCACGTTCTTTTTCAAA+GGG + Chr7:73660522-73660541 MsG0780040144.01.T01:intron 30.0%
AAACTATCCAAATCTGAGAG+AGG - Chr7:73663031-73663050 None:intergenic 35.0%
AAATGCAGAGAAAGCAAAGA+TGG + Chr7:73661769-73661788 MsG0780040144.01.T01:intron 35.0%
AAATTCAGTGCAACTGCTAT+TGG + Chr7:73661557-73661576 MsG0780040144.01.T01:CDS 35.0%
AACAATAGAGCAACTGAATC+TGG + Chr7:73661848-73661867 MsG0780040144.01.T01:CDS 35.0%
AACTAGACATGGAAAGGAAT+AGG + Chr7:73662966-73662985 MsG0780040144.01.T01:CDS 35.0%
AACTTACTTGGTAAATCCCA+AGG - Chr7:73661608-73661627 None:intergenic 35.0%
AATGCAGAGAAAGCAAAGAT+GGG + Chr7:73661770-73661789 MsG0780040144.01.T01:intron 35.0%
ACAATTATCTCAGCATCTGT+TGG - Chr7:73661506-73661525 None:intergenic 35.0%
ACTAGACATGGAAAGGAATA+GGG + Chr7:73662967-73662986 MsG0780040144.01.T01:CDS 35.0%
AGCTGTATCAAAACTAGACA+TGG + Chr7:73662955-73662974 MsG0780040144.01.T01:CDS 35.0%
ATATAAGAAAAAGTAGGGGG+TGG + Chr7:73660436-73660455 MsG0780040144.01.T01:intron 35.0%
ATGCATGAATTCAGATTGGA+AGG + Chr7:73662003-73662022 MsG0780040144.01.T01:intron 35.0%
ATTTGAACAAGTGTGAACCT+TGG + Chr7:73661588-73661607 MsG0780040144.01.T01:CDS 35.0%
CAAATACTAATTATTCGCCG+AGG - Chr7:73661089-73661108 None:intergenic 35.0%
GAACGTGATGAGAAAAGAAA+TGG - Chr7:73660513-73660532 None:intergenic 35.0%
GCATTGTATGATGATCTTGA+AGG + Chr7:73662989-73663008 MsG0780040144.01.T01:CDS 35.0%
GGCCATCAAATTGAAACATA+TGG + Chr7:73660940-73660959 MsG0780040144.01.T01:intron 35.0%
GGTTATGCATGAATTCAGAT+TGG + Chr7:73661999-73662018 MsG0780040144.01.T01:intron 35.0%
GTTGAACCATAAACACTTGT+TGG - Chr7:73662857-73662876 None:intergenic 35.0%
GTTGTTGAGATTTGATTGGT+TGG - Chr7:73662741-73662760 None:intergenic 35.0%
TAAGAATAATGAGTGCAAGG+TGG + Chr7:73662877-73662896 MsG0780040144.01.T01:CDS 35.0%
TATAAAGGAAGAGCTCCAAA+AGG + Chr7:73661961-73661980 MsG0780040144.01.T01:intron 35.0%
TATCTTATCCCGAATCACAT+GGG - Chr7:73660670-73660689 None:intergenic 35.0%
TCAAACCAATCACAAGATAC+AGG + Chr7:73662911-73662930 MsG0780040144.01.T01:CDS 35.0%
TCCCTAACAAAGAAAAGGTA+CGG + Chr7:73662046-73662065 MsG0780040144.01.T01:intron 35.0%
TCTATTGTTCTCATACCTGT+TGG - Chr7:73661837-73661856 None:intergenic 35.0%
TGCTGCGTATAGTTTCTATA+AGG - Chr7:73660908-73660927 None:intergenic 35.0%
TTACTTTATCCAGAATCACG+TGG - Chr7:73660792-73660811 None:intergenic 35.0%
TTATCTTATCCCGAATCACA+TGG - Chr7:73660671-73660690 None:intergenic 35.0%
TTTGAACAAGTGTGAACCTT+GGG + Chr7:73661589-73661608 MsG0780040144.01.T01:CDS 35.0%
! AATGGAAGTGTAGTTCATCA+TGG - Chr7:73662717-73662736 None:intergenic 35.0%
! AGTGGTAAAGGTGCAAATTA+TGG - Chr7:73662250-73662269 None:intergenic 35.0%
! ATCCGTACCTTTTCTTTGTT+AGG - Chr7:73662051-73662070 None:intergenic 35.0%
! GAGATTTGATTGGTTGGAAA+TGG - Chr7:73662735-73662754 None:intergenic 35.0%
! TCCGTACCTTTTCTTTGTTA+GGG - Chr7:73662050-73662069 None:intergenic 35.0%
! TTATTGTTGATGGAGAAGCT+TGG - Chr7:73662620-73662639 None:intergenic 35.0%
!!! CATCACGTTCTTTTTCAAAG+GGG + Chr7:73660523-73660542 MsG0780040144.01.T01:intron 35.0%
!!! CTCATCACGTTCTTTTTCAA+AGG + Chr7:73660521-73660540 MsG0780040144.01.T01:intron 35.0%
AAAGGAATCCAGAACCTTGT+TGG + Chr7:73661916-73661935 MsG0780040144.01.T01:CDS 40.0%
CCATCAAAATCACAGTCAGA+TGG + Chr7:73662584-73662603 MsG0780040144.01.T01:intron 40.0%
GAAGTGTAGTTCATCATGGT+TGG - Chr7:73662713-73662732 None:intergenic 40.0%
GAGTCTTCTTCATACCAACA+AGG - Chr7:73661933-73661952 None:intergenic 40.0%
GAGTTAGATGCACTGTAAAG+CGG + Chr7:73662112-73662131 MsG0780040144.01.T01:intron 40.0%
TAATGAACTCAGATCCTCGA+CGG + Chr7:73662071-73662090 MsG0780040144.01.T01:intron 40.0%
TACGCAGCAACTATTCATCT+CGG + Chr7:73660919-73660938 MsG0780040144.01.T01:intron 40.0%
TCAAATCTCAACAACCCACT+TGG + Chr7:73662746-73662765 MsG0780040144.01.T01:CDS 40.0%
TCCATGCCAACAAGTGTTTA+TGG + Chr7:73662848-73662867 MsG0780040144.01.T01:CDS 40.0%
TCTTCATACCAACAAGGTTC+TGG - Chr7:73661927-73661946 None:intergenic 40.0%
TGACGTATGATGTATATGGG+TGG - Chr7:73660565-73660584 None:intergenic 40.0%
TGAGACCTGTATCTTGTGAT+TGG - Chr7:73662919-73662938 None:intergenic 40.0%
TGATGTATATGGGTGGTTCT+TGG - Chr7:73660558-73660577 None:intergenic 40.0%
TTATCTCAGCATCTGTTGGA+TGG - Chr7:73661502-73661521 None:intergenic 40.0%
TTCGCCGAGGAAAATTATCA+AGG - Chr7:73661076-73661095 None:intergenic 40.0%
! ACCATAAACACTTGTTGGCA+TGG - Chr7:73662852-73662871 None:intergenic 40.0%
! CCATCTGACTGTGATTTTGA+TGG - Chr7:73662587-73662606 None:intergenic 40.0%
! GGATTTTGGATTCGGATTTG+AGG - Chr7:73662788-73662807 None:intergenic 40.0%
! GTGGGTTGTTGAGATTTGAT+TGG - Chr7:73662745-73662764 None:intergenic 40.0%
! TGTTGGATGGAATCTGAAAC+TGG - Chr7:73661489-73661508 None:intergenic 40.0%
!! TCAAGGATTTGGATTTGCTG+CGG - Chr7:73661059-73661078 None:intergenic 40.0%
AATACACGCTGTAAGATCCG+TGG - Chr7:73661183-73661202 None:intergenic 45.0%
AGTTGCACCTCTCTCAGATT+TGG + Chr7:73663021-73663040 MsG0780040144.01.T01:CDS 45.0%
GAGCAACTGAATCTGGTTAC+TGG + Chr7:73661855-73661874 MsG0780040144.01.T01:CDS 45.0%
GCAAAGATGGGAGAGAAGAA+TGG + Chr7:73661782-73661801 MsG0780040144.01.T01:CDS 45.0%
GGTTGAAGCTGCTATAGTAG+CGG + Chr7:73660383-73660402 MsG0780040144.01.T01:intron 45.0%
GTGTAAGAAGGATCCATGAG+AGG - Chr7:73662528-73662547 None:intergenic 45.0%
GTGTGCAAGGCAACTTACAA+AGG - Chr7:73661161-73661180 None:intergenic 45.0%
TAAGAAGGATCCATGAGAGG+TGG - Chr7:73662525-73662544 None:intergenic 45.0%
TCTGGTTACTGGAAAGCTAC+AGG + Chr7:73661866-73661885 MsG0780040144.01.T01:CDS 45.0%
TTCTTCACTTCCACCTCTCA+TGG + Chr7:73662512-73662531 MsG0780040144.01.T01:CDS 45.0%
! GGAGCTTTCAAAGCTTTGTG+TGG - Chr7:73660481-73660500 None:intergenic 45.0%
! GTGAGAGTGTGTTTCCAAGT+GGG - Chr7:73662763-73662782 None:intergenic 45.0%
! TGGATGGAATCTGAAACTGG+AGG - Chr7:73661486-73661505 None:intergenic 45.0%
! TGTGAGAGTGTGTTTCCAAG+TGG - Chr7:73662764-73662783 None:intergenic 45.0%
!! AGGATGAATGGGTTGTGTCA+AGG + Chr7:73662397-73662416 MsG0780040144.01.T01:intron 45.0%
!! GGATGAATGGGTTGTGTCAA+GGG + Chr7:73662398-73662417 MsG0780040144.01.T01:intron 45.0%
!! TATTAAAAAAAAAAAATTGT+AGG + Chr7:73661132-73661151 MsG0780040144.01.T01:intron 5.0%
GGGTGGAGCCTATTGAAAGT+GGG + Chr7:73660453-73660472 MsG0780040144.01.T01:intron 50.0%
GGTGGAGCCTATTGAAAGTG+GGG + Chr7:73660454-73660473 MsG0780040144.01.T01:intron 50.0%
GTAAGTTGCCTTGCACACCA+CGG + Chr7:73661163-73661182 MsG0780040144.01.T01:intron 50.0%
GTGTGGACCCCACTTTCAAT+AGG - Chr7:73660464-73660483 None:intergenic 50.0%
TGTAAGATCCGTGGTGTGCA+AGG - Chr7:73661174-73661193 None:intergenic 50.0%
! GAGAGAGGTGCAACTGATGA+AGG - Chr7:73663016-73663035 None:intergenic 50.0%
GCACTATAACACAGCCGTCG+AGG - Chr7:73662088-73662107 None:intergenic 55.0%
GGGGTGGAGCCTATTGAAAG+TGG + Chr7:73660452-73660471 MsG0780040144.01.T01:intron 55.0%
Chromosome Type Strat End Strand Name
Chr7 gene 73660326 73663063 73660326 ID=MsG0780040144.01;Name=MsG0780040144.01
Chr7 mRNA 73660326 73663063 73660326 ID=MsG0780040144.01.T01;Parent=MsG0780040144.01;Name=MsG0780040144.01.T01;_AED=0.29;_eAED=0.29;_QI=0|0|0|0.8|1|1|5|0|306
Chr7 exon 73660326 73660357 73660326 ID=MsG0780040144.01.T01:exon:10098;Parent=MsG0780040144.01.T01
Chr7 exon 73661490 73661620 73661490 ID=MsG0780040144.01.T01:exon:10099;Parent=MsG0780040144.01.T01
Chr7 exon 73661777 73661937 73661777 ID=MsG0780040144.01.T01:exon:10100;Parent=MsG0780040144.01.T01
Chr7 exon 73662399 73662597 73662399 ID=MsG0780040144.01.T01:exon:10101;Parent=MsG0780040144.01.T01
Chr7 exon 73662666 73663063 73662666 ID=MsG0780040144.01.T01:exon:10102;Parent=MsG0780040144.01.T01
Chr7 CDS 73660326 73660357 73660326 ID=MsG0780040144.01.T01:cds;Parent=MsG0780040144.01.T01
Chr7 CDS 73661490 73661620 73661490 ID=MsG0780040144.01.T01:cds;Parent=MsG0780040144.01.T01
Chr7 CDS 73661777 73661937 73661777 ID=MsG0780040144.01.T01:cds;Parent=MsG0780040144.01.T01
Chr7 CDS 73662399 73662597 73662399 ID=MsG0780040144.01.T01:cds;Parent=MsG0780040144.01.T01
Chr7 CDS 73662666 73663063 73662666 ID=MsG0780040144.01.T01:cds;Parent=MsG0780040144.01.T01
Gene Sequence

>MsG0780040144.01.T01

ATGGTGGTGAATGAATATCATGAGAGAAACAGTTTCAGATTCCATCCAACAGATGCTGAGATAATTGTTTGTTATCTCACTGAAAAGGTTAAAAATAGCAAATTCAGTGCAACTGCTATTGGTGAAGCTGATTTGAACAAGTGTGAACCTTGGGATTTACCAAAGAAAGCAAAGATGGGAGAGAAGAATGGTACTTTTTTTGTCAGAAAGATAGAAATATCCAACAGGTATGAGAACAATAGAGCAACTGAATCTGGTTACTGGAAAGCTACAGGAAAAGACAAAGAGATTTATCACAAAGGAAAGGAATCCAGAACCTTGTTGGATGAATGGGTTGTGTCAAGGGTTTTTCACAAGAACACAGATGTTAAAAAACCTCAAATTTCTTCTGGTCTTTTAAGGATAAACTCAATTGGTCATGATGATCTTCTTGATTATTCTTCACTTCCACCTCTCATGGATCCTTCTTACACAAATGATGAATTCAAGGGAATCACCAATCAACAATTCCATCAAAATCACAAAGATAATTACCATAGAATCAACTATGATCATCATGAGATAAATCCAACCATGATGAACTACACTTCCATTTCCAACCAATCAAATCTCAACAACCCACTTGGAAACACACTCTCACAACCTCAAATCCGAATCCAAAATCCAAACTTGAACTACTTTATGTATCAAAATAGGATGCAAAGTTCCATGCCAACAAGTGTTTATGGTTCAACTAAGAATAATGAGTGCAAGGTGGAACAATTCTCTTCAAACCAATCACAAGATACAGGTCTCAGCAATGACACATCATCAGCTGTATCAAAACTAGACATGGAAAGGAATAGGGCATTGTATGATGATCTTGAAGGTCCTTCATCAGTTGCACCTCTCTCAGATTTGGATAGTTTTTGGGACTATTGA

Protein sequence

>MsG0780040144.01.T01

MVVNEYHERNSFRFHPTDAEIIVCYLTEKVKNSKFSATAIGEADLNKCEPWDLPKKAKMGEKNGTFFVRKIEISNRYENNRATESGYWKATGKDKEIYHKGKESRTLLDEWVVSRVFHKNTDVKKPQISSGLLRINSIGHDDLLDYSSLPPLMDPSYTNDEFKGITNQQFHQNHKDNYHRINYDHHEINPTMMNYTSISNQSNLNNPLGNTLSQPQIRIQNPNLNYFMYQNRMQSSMPTSVYGSTKNNECKVEQFSSNQSQDTGLSNDTSSAVSKLDMERNRALYDDLEGPSSVAPLSDLDSFWDY*