AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022760.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022760.01.T01 MTR_4g094588 94.269 349 9 2 1 349 1 338 0.0 675
MsG0480022760.01.T01 MTR_5g091390 46.075 293 140 8 52 342 28 304 4.35e-53 177
MsG0480022760.01.T01 MTR_5g043880 51.852 189 76 5 165 349 100 277 2.58e-47 161
MsG0480022760.01.T01 MTR_1g086790 50.000 190 83 3 165 343 134 322 5.40e-47 162
MsG0480022760.01.T01 MTR_7g109800 50.556 180 79 6 165 342 121 292 1.63e-43 152
MsG0480022760.01.T01 MTR_2g033820 68.817 93 29 0 172 264 186 278 5.53e-41 147
MsG0480022760.01.T01 MTR_8g007270 62.921 89 33 0 157 245 122 210 2.71e-33 123
MsG0480022760.01.T01 MTR_5g042920 45.098 153 71 3 129 271 259 408 3.41e-33 128
MsG0480022760.01.T01 MTR_5g042920 60.000 60 23 1 189 248 151 209 2.37e-16 80.1
MsG0480022760.01.T01 MTR_7g079010 48.227 141 65 3 107 247 67 199 3.32e-32 120
MsG0480022760.01.T01 MTR_4g122530 43.678 174 71 5 173 344 192 340 6.25e-32 124
MsG0480022760.01.T01 MTR_3g095080 47.518 141 67 2 107 245 65 200 7.87e-32 119
MsG0480022760.01.T01 MTR_3g095080 47.518 141 67 2 107 245 89 224 8.21e-32 120
MsG0480022760.01.T01 MTR_3g104750 64.198 81 28 1 167 246 81 161 4.52e-31 115
MsG0480022760.01.T01 MTR_3g056100 55.140 107 47 1 156 262 225 330 2.32e-30 120
MsG0480022760.01.T01 MTR_3g056100 48.101 79 35 2 189 267 99 171 2.34e-15 77.0
MsG0480022760.01.T01 MTR_3g056100 55.140 107 47 1 156 262 238 343 2.42e-30 120
MsG0480022760.01.T01 MTR_3g056100 48.101 79 35 2 189 267 99 171 1.99e-15 77.4
MsG0480022760.01.T01 MTR_4g082580 51.429 105 51 0 146 250 235 339 3.19e-30 119
MsG0480022760.01.T01 MTR_8g092010 49.107 112 50 2 141 248 59 167 4.99e-30 113
MsG0480022760.01.T01 MTR_3g056100 55.140 107 47 1 156 262 382 487 5.66e-30 120
MsG0480022760.01.T01 MTR_3g056100 48.101 79 35 2 189 267 243 315 2.76e-15 77.4
MsG0480022760.01.T01 MTR_8g092140 68.919 74 22 1 173 245 143 216 5.83e-30 115
MsG0480022760.01.T01 MTR_3g056100 55.140 107 47 1 156 262 369 474 5.86e-30 120
MsG0480022760.01.T01 MTR_3g056100 48.101 79 35 2 189 267 243 315 3.33e-15 77.0
MsG0480022760.01.T01 MTR_3g095040 47.619 105 42 1 175 279 104 195 1.60e-29 112
MsG0480022760.01.T01 MTR_4g013260 62.195 82 31 0 167 248 314 395 2.45e-29 118
MsG0480022760.01.T01 MTR_4g013260 52.632 76 34 1 189 262 184 259 1.53e-18 87.0
MsG0480022760.01.T01 MTR_5g094430 60.494 81 32 0 170 250 211 291 2.53e-29 117
MsG0480022760.01.T01 MTR_5g094430 59.322 59 23 1 190 248 67 124 3.01e-15 76.6
MsG0480022760.01.T01 MTR_1g015140 63.636 77 28 0 170 246 83 159 2.68e-29 110
MsG0480022760.01.T01 MTR_7g011820 46.094 128 61 1 123 250 352 471 2.77e-29 118
MsG0480022760.01.T01 MTR_7g011820 48.889 90 30 2 174 248 198 286 4.78e-16 79.3
MsG0480022760.01.T01 MTR_5g094430 60.494 81 32 0 170 250 233 313 3.16e-29 117
MsG0480022760.01.T01 MTR_5g094430 59.322 59 23 1 190 248 89 146 2.72e-15 77.0
MsG0480022760.01.T01 MTR_7g028415 66.197 71 24 0 177 247 81 151 3.57e-29 110
MsG0480022760.01.T01 MTR_7g028710 66.197 71 24 0 177 247 81 151 3.57e-29 110
MsG0480022760.01.T01 MTR_5g094430 60.494 81 32 0 170 250 345 425 7.40e-29 117
MsG0480022760.01.T01 MTR_5g094430 59.322 59 23 1 190 248 201 258 4.02e-15 76.6
MsG0480022760.01.T01 MTR_3g009470 64.103 78 28 0 173 250 479 556 9.12e-29 117
MsG0480022760.01.T01 MTR_3g009470 64.062 64 22 1 189 252 280 342 7.99e-19 88.2
MsG0480022760.01.T01 MTR_5g074400 45.185 135 55 3 127 256 366 486 1.60e-28 116
MsG0480022760.01.T01 MTR_5g074400 61.667 60 22 1 189 248 243 301 6.31e-16 79.3
MsG0480022760.01.T01 MTR_1g077780 53.659 82 38 0 170 251 43 124 2.68e-28 107
MsG0480022760.01.T01 MTR_7g071120 37.433 187 95 5 101 270 223 404 3.87e-28 114
MsG0480022760.01.T01 MTR_7g071120 56.522 69 29 1 184 252 161 228 7.69e-17 81.6
MsG0480022760.01.T01 MTR_3g031220 57.317 82 35 0 168 249 344 425 1.57e-26 110
MsG0480022760.01.T01 MTR_3g031220 40.179 112 61 3 172 282 185 291 2.69e-16 80.1
MsG0480022760.01.T01 MTR_3g053330 34.872 195 104 5 163 347 225 406 2.28e-26 109
MsG0480022760.01.T01 MTR_7g080020 54.118 85 39 0 170 254 474 558 2.98e-26 110
MsG0480022760.01.T01 MTR_7g080020 54.762 84 33 2 169 252 264 342 4.94e-18 85.9
MsG0480022760.01.T01 MTR_8g096730 51.190 84 41 0 167 250 48 131 9.69e-26 101
MsG0480022760.01.T01 MTR_7g100510 41.912 136 65 2 115 248 297 420 1.68e-25 106
MsG0480022760.01.T01 MTR_7g100510 55.882 68 29 1 190 257 190 256 2.35e-16 80.1
MsG0480022760.01.T01 MTR_7g080000 53.659 82 38 0 169 250 412 493 2.79e-25 107
MsG0480022760.01.T01 MTR_7g080000 51.190 84 36 2 169 252 218 296 1.03e-16 81.6
MsG0480022760.01.T01 MTR_5g097490 50.000 108 50 2 157 261 220 326 2.05e-23 100
MsG0480022760.01.T01 MTR_5g097490 51.515 66 23 2 189 250 92 152 2.30e-12 67.8
MsG0480022760.01.T01 MTR_7g062220 71.930 57 16 0 189 245 124 180 3.80e-23 98.6
MsG0480022760.01.T01 MTR_2g023930 45.652 92 49 1 158 248 274 365 5.13e-23 100
MsG0480022760.01.T01 MTR_4g132430 44.565 92 50 1 158 248 96 187 7.35e-23 98.2
MsG0480022760.01.T01 MTR_7g110720 43.363 113 60 3 139 248 138 249 1.20e-22 98.2
MsG0480022760.01.T01 MTR_7g110720 53.247 77 35 1 173 248 200 276 2.04e-22 97.8
MsG0480022760.01.T01 MTR_4g132430 44.565 92 50 1 158 248 230 321 2.90e-22 97.8
MsG0480022760.01.T01 MTR_2g105060 51.220 82 37 2 171 249 74 155 5.46e-22 93.6
MsG0480022760.01.T01 MTR_1g009613 41.667 96 55 1 165 259 238 333 7.51e-22 95.1
MsG0480022760.01.T01 MTR_2g105060 51.220 82 37 2 171 249 149 230 9.17e-22 94.4
MsG0480022760.01.T01 MTR_6g086555 41.129 124 49 4 175 275 192 314 1.07e-21 95.5
MsG0480022760.01.T01 MTR_2g045360 36.641 131 73 3 160 283 182 309 4.26e-21 94.0
MsG0480022760.01.T01 MTR_2g088000 46.429 84 44 1 166 248 326 409 4.71e-21 94.7
MsG0480022760.01.T01 MTR_4g130900 42.991 107 59 1 149 253 319 425 8.28e-21 93.6
MsG0480022760.01.T01 MTR_4g049760 39.837 123 72 2 149 269 250 372 1.46e-20 93.2
MsG0480022760.01.T01 MTR_7g009730 43.478 115 56 3 149 258 175 285 1.81e-20 92.8
MsG0480022760.01.T01 MTR_4g094412 47.436 78 40 1 173 249 218 295 3.27e-20 91.7
MsG0480022760.01.T01 MTR_4g094412 47.436 78 40 1 173 249 227 304 3.42e-20 91.7
MsG0480022760.01.T01 MTR_8g098945 50.617 81 38 2 188 267 128 207 5.64e-20 88.6
MsG0480022760.01.T01 MTR_5g016610 41.053 95 55 1 152 245 162 256 8.78e-20 88.2
MsG0480022760.01.T01 MTR_4g107970 44.186 86 47 1 164 248 153 238 1.37e-19 90.1
MsG0480022760.01.T01 MTR_7g109600 60.317 63 24 1 190 251 54 116 1.40e-19 87.4
MsG0480022760.01.T01 MTR_4g107970 48.052 77 39 1 173 248 239 315 1.75e-19 90.1
MsG0480022760.01.T01 MTR_4g049790 37.500 128 77 2 156 282 281 406 1.83e-19 89.7
MsG0480022760.01.T01 MTR_2g032030 43.878 98 52 2 155 249 231 328 2.18e-19 89.0
MsG0480022760.01.T01 MTR_2g032030 43.878 98 52 2 155 249 231 328 2.72e-19 89.0
MsG0480022760.01.T01 MTR_1g013760 57.895 57 23 1 190 245 141 197 7.16e-19 85.9
MsG0480022760.01.T01 MTR_7g079040 59.016 61 24 1 190 249 155 215 9.29e-19 86.3
MsG0480022760.01.T01 MTR_3g009470 57.534 73 30 1 189 261 280 351 9.63e-19 87.4
MsG0480022760.01.T01 MTR_2g016770 56.667 60 25 1 190 248 36 95 1.01e-18 84.0
MsG0480022760.01.T01 MTR_2g016770 56.667 60 25 1 190 248 28 87 1.28e-18 83.6
MsG0480022760.01.T01 MTR_8g028565 55.072 69 27 2 190 254 156 224 1.45e-18 85.9
MsG0480022760.01.T01 MTR_8g087000 58.065 62 25 1 190 250 77 138 1.82e-18 84.0
MsG0480022760.01.T01 MTR_8g087000 58.065 62 25 1 190 250 78 139 1.85e-18 84.0
MsG0480022760.01.T01 MTR_4g127040 39.560 91 54 1 156 245 212 302 5.62e-18 84.0
MsG0480022760.01.T01 MTR_4g007060 51.613 62 29 1 188 248 127 188 5.88e-18 83.2
MsG0480022760.01.T01 MTR_4g007060 51.613 62 29 1 188 248 161 222 7.52e-18 83.6
MsG0480022760.01.T01 MTR_5g029850 82.500 40 7 0 167 206 29 68 8.01e-18 77.4
MsG0480022760.01.T01 MTR_3g106060 54.237 59 26 1 188 245 137 195 1.03e-17 82.8
MsG0480022760.01.T01 MTR_3g108960 41.463 82 47 1 165 245 290 371 1.75e-17 83.2
MsG0480022760.01.T01 MTR_2g083870 56.667 60 25 1 190 248 81 140 3.32e-17 80.9
MsG0480022760.01.T01 MTR_1g070455 54.839 62 26 2 190 249 294 355 4.09e-17 82.0
MsG0480022760.01.T01 MTR_1g078260 47.887 71 36 1 176 245 234 304 5.28e-17 82.4
MsG0480022760.01.T01 MTR_3g031220 40.179 112 61 3 172 282 185 291 1.39e-16 80.5
MsG0480022760.01.T01 MTR_4g094908 40.244 82 48 1 165 245 242 323 2.11e-16 79.7
MsG0480022760.01.T01 MTR_2g024350 52.239 67 30 2 186 250 4 70 2.24e-16 77.8
MsG0480022760.01.T01 MTR_4g047580 37.391 115 67 3 139 252 235 345 3.58e-16 80.1
MsG0480022760.01.T01 MTR_1g099600 46.341 82 42 2 170 249 165 246 4.03e-16 78.6
MsG0480022760.01.T01 MTR_5g097500 48.684 76 39 0 174 249 215 290 4.60e-16 78.2
MsG0480022760.01.T01 MTR_1g013790 38.947 95 48 3 188 281 100 185 5.49e-16 77.0
MsG0480022760.01.T01 MTR_8g099350 43.000 100 44 3 165 256 103 197 6.09e-16 78.6
MsG0480022760.01.T01 MTR_2g024380 44.706 85 44 3 168 249 228 312 6.78e-16 79.0
MsG0480022760.01.T01 MTR_0117s0040 38.710 93 55 2 154 245 40 131 1.91e-15 75.5
MsG0480022760.01.T01 MTR_5g067680 35.971 139 82 3 108 243 125 259 1.49e-14 74.3
MsG0480022760.01.T01 MTR_2g075610 45.455 77 37 2 188 261 28 102 2.01e-14 71.2
MsG0480022760.01.T01 MTR_8g067650 38.000 100 60 2 160 257 309 408 2.29e-14 74.3
MsG0480022760.01.T01 MTR_8g069935 39.785 93 54 2 158 248 299 391 4.31e-14 73.6
MsG0480022760.01.T01 MTR_8g067635 37.255 102 62 2 158 257 317 418 4.69e-14 73.6
MsG0480022760.01.T01 MTR_2g075750 43.038 79 40 2 188 263 27 103 6.02e-14 69.7
MsG0480022760.01.T01 MTR_3g090860 46.377 69 34 1 188 253 132 200 6.55e-14 72.4
MsG0480022760.01.T01 MTR_5g074200 49.296 71 33 2 182 250 211 280 3.09e-13 70.1
MsG0480022760.01.T01 MTR_6g053200 29.932 147 95 5 152 293 292 435 6.11e-13 70.1
MsG0480022760.01.T01 MTR_7g117200 41.758 91 47 3 158 243 86 175 6.67e-13 68.9
MsG0480022760.01.T01 MTR_8g027860 32.877 146 72 5 188 320 135 267 8.93e-13 68.9
MsG0480022760.01.T01 MTR_7g073430 40.625 96 50 3 154 243 85 179 1.30e-12 67.8
MsG0480022760.01.T01 MTR_3g095080 38.318 107 59 2 107 211 89 190 2.06e-12 65.9
MsG0480022760.01.T01 MTR_7g073380 31.852 135 81 5 148 278 83 210 2.41e-12 67.0
MsG0480022760.01.T01 MTR_8g005750 41.000 100 49 4 149 243 66 160 2.42e-12 67.0
MsG0480022760.01.T01 MTR_2g075700 43.333 90 45 2 157 243 115 201 2.99e-12 67.0
MsG0480022760.01.T01 MTR_2g075680 35.772 123 60 3 124 243 99 205 3.42e-12 66.6
MsG0480022760.01.T01 MTR_8g092010 41.772 79 39 2 141 215 59 134 4.28e-12 63.2
MsG0480022760.01.T01 MTR_8g032510 40.000 90 45 3 189 269 119 208 8.40e-12 65.5
MsG0480022760.01.T01 MTR_3g093830 32.414 145 90 4 102 243 45 184 1.26e-11 65.1
MsG0480022760.01.T01 MTR_5g067700 39.080 87 48 3 188 270 105 190 1.34e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022760.01.T01 AT4G18170 49.191 309 128 12 39 343 31 314 4.04e-67 214
MsG0480022760.01.T01 AT1G29860 54.706 170 65 3 173 342 120 277 1.63e-54 180
MsG0480022760.01.T01 AT5G46350 48.780 246 96 8 54 272 36 278 3.20e-52 176
MsG0480022760.01.T01 AT1G69310 47.312 186 72 3 164 344 122 286 6.94e-45 155
MsG0480022760.01.T01 AT1G69310 47.312 186 72 3 164 344 122 286 6.94e-45 155
MsG0480022760.01.T01 AT1G69310 47.312 186 72 3 164 344 122 286 6.94e-45 155
MsG0480022760.01.T01 AT2G47260 45.989 187 91 3 165 343 150 334 1.55e-42 150
MsG0480022760.01.T01 AT5G49520 45.652 184 90 2 173 346 205 388 9.62e-42 150
MsG0480022760.01.T01 AT1G69310 45.161 186 72 4 164 344 122 282 2.46e-39 141
MsG0480022760.01.T01 AT3G62340 58.763 97 38 1 167 263 96 190 1.65e-34 128
MsG0480022760.01.T01 AT4G39410 67.857 84 27 0 162 245 196 279 1.80e-34 129
MsG0480022760.01.T01 AT2G44745 63.441 93 33 1 153 245 110 201 8.22e-34 124
MsG0480022760.01.T01 AT5G07100 53.535 99 46 0 161 259 113 211 5.00e-32 120
MsG0480022760.01.T01 AT5G07100 46.479 71 38 0 189 259 24 94 1.78e-14 72.0
MsG0480022760.01.T01 AT5G07100 53.535 99 46 0 161 259 113 211 5.00e-32 120
MsG0480022760.01.T01 AT5G07100 46.479 71 38 0 189 259 24 94 1.78e-14 72.0
MsG0480022760.01.T01 AT5G07100 53.535 99 46 0 161 259 113 211 5.00e-32 120
MsG0480022760.01.T01 AT5G07100 46.479 71 38 0 189 259 24 94 1.78e-14 72.0
MsG0480022760.01.T01 AT5G07100 53.535 99 46 0 161 259 113 211 5.00e-32 120
MsG0480022760.01.T01 AT5G07100 46.479 71 38 0 189 259 24 94 1.78e-14 72.0
MsG0480022760.01.T01 AT2G46130 65.823 79 27 0 169 247 10 88 7.04e-32 116
MsG0480022760.01.T01 AT5G07100 44.203 138 65 1 122 259 179 304 8.93e-32 121
MsG0480022760.01.T01 AT5G07100 46.479 71 38 0 189 259 117 187 3.03e-14 72.8
MsG0480022760.01.T01 AT2G03340 42.759 145 74 2 115 250 332 476 4.36e-31 123
MsG0480022760.01.T01 AT2G03340 60.606 66 24 2 189 254 250 313 3.59e-17 82.8
MsG0480022760.01.T01 AT1G64000 58.824 85 35 0 163 247 88 172 1.76e-30 115
MsG0480022760.01.T01 AT1G13960 45.522 134 69 1 115 248 186 315 3.85e-30 118
MsG0480022760.01.T01 AT1G13960 45.522 134 69 1 115 248 339 468 4.25e-30 120
MsG0480022760.01.T01 AT5G41570 60.494 81 32 0 167 247 76 156 7.94e-30 113
MsG0480022760.01.T01 AT5G26170 65.714 70 24 0 176 245 100 169 1.29e-29 112
MsG0480022760.01.T01 AT4G26640 62.963 81 30 0 170 250 186 266 2.64e-29 116
MsG0480022760.01.T01 AT4G26640 54.286 70 31 1 189 258 35 103 2.03e-16 80.1
MsG0480022760.01.T01 AT4G26640 62.963 81 30 0 170 250 186 266 2.64e-29 116
MsG0480022760.01.T01 AT4G26640 54.286 70 31 1 189 258 35 103 2.03e-16 80.1
MsG0480022760.01.T01 AT4G26640 62.963 81 30 0 170 250 186 266 2.64e-29 116
MsG0480022760.01.T01 AT4G26640 54.286 70 31 1 189 258 35 103 2.03e-16 80.1
MsG0480022760.01.T01 AT4G26640 62.963 81 30 0 170 250 186 266 2.64e-29 116
MsG0480022760.01.T01 AT4G26640 54.286 70 31 1 189 258 35 103 2.03e-16 80.1
MsG0480022760.01.T01 AT3G01080 68.000 75 24 0 174 248 329 403 3.12e-29 117
MsG0480022760.01.T01 AT3G01080 54.412 68 30 1 189 256 205 271 2.54e-16 80.1
MsG0480022760.01.T01 AT3G01080 68.000 75 24 0 174 248 291 365 3.34e-29 117
MsG0480022760.01.T01 AT3G01080 54.412 68 30 1 189 256 167 233 3.46e-16 79.7
MsG0480022760.01.T01 AT5G13080 64.000 75 27 0 176 250 54 128 3.62e-29 110
MsG0480022760.01.T01 AT3G01970 63.889 72 26 0 176 247 52 123 8.31e-29 109
MsG0480022760.01.T01 AT4G26640 62.963 81 30 0 170 250 290 370 8.52e-29 116
MsG0480022760.01.T01 AT4G26640 54.286 70 31 1 189 258 139 207 2.78e-16 80.1
MsG0480022760.01.T01 AT4G26640 62.963 81 30 0 170 250 322 402 9.64e-29 116
MsG0480022760.01.T01 AT4G26640 54.286 70 31 1 189 258 171 239 3.14e-16 80.1
MsG0480022760.01.T01 AT4G26640 62.963 81 30 0 170 250 362 442 1.13e-28 117
MsG0480022760.01.T01 AT4G26640 54.286 70 31 1 189 258 211 279 3.00e-16 80.1
MsG0480022760.01.T01 AT2G38470 53.535 99 46 0 170 268 343 441 3.26e-28 115
MsG0480022760.01.T01 AT2G38470 63.333 60 21 1 189 248 184 242 2.33e-16 80.5
MsG0480022760.01.T01 AT2G30250 61.446 83 32 0 170 252 309 391 3.66e-28 113
MsG0480022760.01.T01 AT2G30250 42.857 91 37 3 190 268 167 254 1.80e-13 71.2
MsG0480022760.01.T01 AT5G56270 62.821 78 29 0 173 250 471 548 7.64e-28 115
MsG0480022760.01.T01 AT5G56270 65.000 60 20 1 189 248 273 331 5.65e-17 82.8
MsG0480022760.01.T01 AT2G46130 60.759 79 27 1 169 247 10 84 1.63e-26 102
MsG0480022760.01.T01 AT4G26440 47.107 121 48 3 130 250 329 433 5.29e-26 109
MsG0480022760.01.T01 AT4G26440 58.333 60 24 1 189 248 178 236 3.56e-14 73.9
MsG0480022760.01.T01 AT5G64810 43.269 104 59 0 155 258 76 179 7.52e-26 102
MsG0480022760.01.T01 AT4G04450 42.241 116 65 2 152 265 160 275 5.65e-25 105
MsG0480022760.01.T01 AT4G04450 42.241 116 65 2 152 265 254 369 1.76e-24 104
MsG0480022760.01.T01 AT2G04880 56.250 80 35 0 169 248 263 342 5.77e-24 102
MsG0480022760.01.T01 AT2G04880 53.968 63 28 1 188 250 110 171 5.41e-14 73.2
MsG0480022760.01.T01 AT2G21900 46.237 93 45 2 164 251 79 171 5.87e-24 98.2
MsG0480022760.01.T01 AT2G04880 56.250 80 35 0 169 248 287 366 6.26e-24 102
MsG0480022760.01.T01 AT2G04880 53.968 63 28 1 188 250 110 171 5.20e-14 73.2
MsG0480022760.01.T01 AT1G62300 28.947 266 137 8 121 346 237 490 1.63e-23 102
MsG0480022760.01.T01 AT4G22070 47.126 87 45 1 163 248 271 357 7.85e-23 99.8
MsG0480022760.01.T01 AT4G22070 47.126 87 45 1 163 248 271 357 7.85e-23 99.8
MsG0480022760.01.T01 AT4G22070 47.126 87 45 1 163 248 271 357 7.85e-23 99.8
MsG0480022760.01.T01 AT4G22070 47.126 87 45 1 163 248 271 357 7.85e-23 99.8
MsG0480022760.01.T01 AT2G37260 51.765 85 40 1 161 245 242 325 1.43e-22 97.4
MsG0480022760.01.T01 AT2G37260 54.430 79 34 2 172 249 67 144 1.37e-16 80.1
MsG0480022760.01.T01 AT2G37260 51.765 85 40 1 161 245 240 323 1.45e-22 97.4
MsG0480022760.01.T01 AT2G37260 54.430 79 34 2 172 249 65 142 1.32e-16 80.1
MsG0480022760.01.T01 AT2G37260 51.765 85 40 1 161 245 322 405 2.41e-22 97.8
MsG0480022760.01.T01 AT2G37260 54.430 79 34 2 172 249 147 224 1.99e-16 80.5
MsG0480022760.01.T01 AT1G55600 51.899 79 38 0 170 248 288 366 1.88e-21 95.5
MsG0480022760.01.T01 AT1G68150 44.681 94 51 1 173 265 219 312 2.39e-21 94.4
MsG0480022760.01.T01 AT1G80840 41.026 117 59 4 144 254 100 212 7.19e-21 91.7
MsG0480022760.01.T01 AT4G30935 46.237 93 48 1 170 260 312 404 2.21e-20 92.4
MsG0480022760.01.T01 AT1G18860 49.351 77 38 1 173 248 223 299 3.31e-20 92.0
MsG0480022760.01.T01 AT2G30590 45.783 83 44 1 165 246 289 371 5.11e-20 90.5
MsG0480022760.01.T01 AT4G31800 49.296 71 35 1 188 257 110 180 6.29e-20 88.2
MsG0480022760.01.T01 AT4G01720 49.351 77 38 1 173 248 223 299 7.36e-20 90.9
MsG0480022760.01.T01 AT4G31800 49.296 71 35 1 188 257 175 245 1.11e-19 88.6
MsG0480022760.01.T01 AT1G29280 58.333 60 24 1 190 248 75 134 1.97e-19 87.0
MsG0480022760.01.T01 AT2G23320 34.437 151 84 3 99 247 162 299 2.61e-19 87.8
MsG0480022760.01.T01 AT4G01250 59.016 61 24 1 190 249 129 189 3.31e-19 87.0
MsG0480022760.01.T01 AT2G34830 43.878 98 52 2 155 249 179 276 3.62e-19 88.6
MsG0480022760.01.T01 AT2G25000 54.839 62 27 1 188 248 102 163 3.65e-19 85.5
MsG0480022760.01.T01 AT2G25000 54.839 62 27 1 188 248 102 163 3.65e-19 85.5
MsG0480022760.01.T01 AT2G34830 43.878 98 52 2 155 249 188 285 3.87e-19 88.6
MsG0480022760.01.T01 AT2G25000 54.839 62 27 1 188 248 124 185 6.13e-19 85.5
MsG0480022760.01.T01 AT2G25000 54.839 62 27 1 188 248 145 206 9.00e-19 85.5
MsG0480022760.01.T01 AT5G52830 50.602 83 37 2 190 268 166 248 1.54e-18 85.9
MsG0480022760.01.T01 AT3G58710 52.113 71 33 1 181 250 63 133 1.72e-18 84.7
MsG0480022760.01.T01 AT3G58710 52.113 71 33 1 181 250 62 132 1.92e-18 84.3
MsG0480022760.01.T01 AT5G43290 63.158 57 21 0 189 245 114 170 2.05e-18 84.3
MsG0480022760.01.T01 AT5G45050 41.837 98 55 2 161 257 1013 1109 2.13e-18 87.0
MsG0480022760.01.T01 AT4G31550 43.902 82 45 1 165 245 221 302 2.16e-18 85.1
MsG0480022760.01.T01 AT5G45050 41.837 98 55 2 161 257 1124 1220 2.30e-18 87.0
MsG0480022760.01.T01 AT5G45050 41.837 98 55 2 161 257 1152 1248 2.35e-18 87.0
MsG0480022760.01.T01 AT1G30650 41.509 106 57 3 155 257 181 284 2.37e-18 86.3
MsG0480022760.01.T01 AT5G15130 42.222 90 50 2 163 250 158 247 2.49e-18 86.3
MsG0480022760.01.T01 AT5G15130 45.570 79 42 1 173 250 211 289 2.62e-18 86.3
MsG0480022760.01.T01 AT4G31550 40.909 88 51 1 159 245 216 303 2.78e-18 84.7
MsG0480022760.01.T01 AT2G24570 41.758 91 52 1 156 245 210 300 4.57e-18 84.3
MsG0480022760.01.T01 AT4G23550 50.000 78 35 2 184 257 135 212 9.07e-18 83.2
MsG0480022760.01.T01 AT4G24240 38.298 94 57 1 155 247 247 340 3.68e-17 82.0
MsG0480022760.01.T01 AT3G01080 54.412 68 30 1 189 256 205 271 8.78e-17 80.5
MsG0480022760.01.T01 AT1G69810 43.678 87 47 2 173 257 129 215 9.49e-17 80.5
MsG0480022760.01.T01 AT1G69810 44.186 86 46 2 173 256 187 272 1.24e-16 80.9
MsG0480022760.01.T01 AT5G28650 40.476 84 49 1 163 245 236 319 1.30e-16 80.1
MsG0480022760.01.T01 AT3G04670 39.286 84 50 1 163 245 236 319 7.41e-16 77.8
MsG0480022760.01.T01 AT3G56400 33.562 146 64 4 113 243 50 177 1.05e-13 71.2
MsG0480022760.01.T01 AT2G46400 39.048 105 59 2 142 243 59 161 2.06e-13 70.5
MsG0480022760.01.T01 AT1G66560 51.724 58 25 1 189 243 103 160 2.30e-13 69.7
MsG0480022760.01.T01 AT2G40740 36.975 119 68 3 138 250 123 240 5.43e-13 68.9
MsG0480022760.01.T01 AT2G40740 36.975 119 68 3 138 250 132 249 6.11e-13 68.9
MsG0480022760.01.T01 AT5G45260 39.048 105 60 2 154 255 1174 1277 6.31e-13 70.5
MsG0480022760.01.T01 AT4G12020 42.105 95 41 2 115 209 581 661 8.35e-13 70.1
MsG0480022760.01.T01 AT4G12020 50.000 62 30 1 187 248 466 526 6.59e-12 67.4
MsG0480022760.01.T01 AT4G12020 42.105 95 41 2 115 209 581 661 8.42e-13 70.1
MsG0480022760.01.T01 AT4G12020 50.000 62 30 1 187 248 466 526 6.35e-12 67.4
MsG0480022760.01.T01 AT4G12020 42.105 95 41 2 115 209 581 661 8.90e-13 70.1
MsG0480022760.01.T01 AT4G12020 50.000 62 30 1 187 248 466 526 7.41e-12 67.4
MsG0480022760.01.T01 AT4G12020 42.105 95 41 2 115 209 581 661 9.06e-13 70.1
MsG0480022760.01.T01 AT4G12020 50.000 62 30 1 187 248 466 526 7.40e-12 67.4
MsG0480022760.01.T01 AT4G12020 42.105 95 41 2 115 209 581 661 9.14e-13 70.1
MsG0480022760.01.T01 AT4G12020 50.000 62 30 1 187 248 466 526 6.25e-12 67.4
MsG0480022760.01.T01 AT4G12020 42.105 95 41 2 115 209 581 661 9.14e-13 70.1
MsG0480022760.01.T01 AT4G12020 50.000 62 30 1 187 248 466 526 6.25e-12 67.4
MsG0480022760.01.T01 AT4G12020 42.105 95 41 2 115 209 581 661 9.41e-13 70.1
MsG0480022760.01.T01 AT4G12020 50.000 62 30 1 187 248 466 526 6.97e-12 67.4
MsG0480022760.01.T01 AT4G12020 42.105 95 41 2 115 209 514 594 9.51e-13 70.1
MsG0480022760.01.T01 AT4G12020 50.000 62 30 1 187 248 399 459 7.11e-12 67.4
MsG0480022760.01.T01 AT4G12020 42.105 95 41 2 115 209 581 661 1.00e-12 70.1
MsG0480022760.01.T01 AT4G12020 50.000 62 30 1 187 248 466 526 7.23e-12 67.4
MsG0480022760.01.T01 AT4G12020 42.105 95 41 2 115 209 581 661 1.00e-12 70.1
MsG0480022760.01.T01 AT4G12020 50.000 62 30 1 187 248 466 526 7.23e-12 67.4
MsG0480022760.01.T01 AT4G12020 42.105 95 41 2 115 209 581 661 1.12e-12 69.7
MsG0480022760.01.T01 AT4G12020 50.000 62 30 1 187 248 466 526 8.67e-12 67.0
MsG0480022760.01.T01 AT1G66600 50.000 60 27 1 187 243 101 160 4.22e-12 65.9
MsG0480022760.01.T01 AT4G11070 51.724 58 25 1 189 243 109 166 6.60e-12 65.9
MsG0480022760.01.T01 AT4G11070 51.724 58 25 1 189 243 141 198 7.17e-12 65.9
MsG0480022760.01.T01 AT1G80590 46.032 63 31 1 190 249 86 148 1.61e-11 63.9
MsG0480022760.01.T01 AT5G24110 39.506 81 41 3 171 243 90 170 1.99e-11 64.7
MsG0480022760.01.T01 AT1G66550 49.123 57 26 1 190 243 104 160 2.37e-11 63.5
MsG0480022760.01.T01 AT1G66550 49.123 57 26 1 190 243 109 165 2.73e-11 63.5
MsG0480022760.01.T01 AT5G01900 50.877 57 25 1 190 243 111 167 3.06e-11 63.5
MsG0480022760.01.T01 AT2G40750 39.394 99 50 3 155 243 111 209 8.03e-11 63.2
MsG0480022760.01.T01 AT4G23810 50.000 58 26 1 189 243 158 215 9.62e-11 62.8

Find 73 sgRNAs with CRISPR-Local

Find 106 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCAGCCGCATTGCCTCTT+AGG 0.193434 4:-76419587 None:intergenic
TCACCACTTGCAACTTCTTT+TGG 0.209987 4:+76418479 MsG0480022760.01.T01:CDS
AATGTTGTTGTGTGAATAAA+TGG 0.267587 4:-76419757 None:intergenic
AAGCCTTCAGCTGGAGAATT+AGG 0.278295 4:+76418557 MsG0480022760.01.T01:CDS
GATGATGGATCAAAGTAATT+AGG 0.315468 4:-76418401 None:intergenic
GGAGTAGAAGAAGAAGATTC+AGG 0.323631 4:+76418647 MsG0480022760.01.T01:CDS
TCTTGATAGTAAGGTTGTTT+AGG 0.329116 4:-76418269 None:intergenic
GGATACAGATGGAGAAAATA+TGG 0.347876 4:+76418943 MsG0480022760.01.T01:CDS
TATGTTGTTATCACAGTTGT+TGG 0.355489 4:-76419531 None:intergenic
CAACTTCCTCCTGATCAATA+TGG 0.365572 4:+76419810 MsG0480022760.01.T01:CDS
ACACCTACTCCTTTCTCATA+TGG 0.380056 4:+76419636 MsG0480022760.01.T01:CDS
TCCCTTCCATGTTCCTCAAC+AGG 0.390401 4:+76419850 MsG0480022760.01.T01:CDS
CATACTACTAATACCGTTGC+TGG 0.398105 4:+76419732 MsG0480022760.01.T01:CDS
TGCAGCCGCATTGCCTCTTA+GGG 0.408589 4:-76419586 None:intergenic
TCCTTTCTTCTTATCCACCT+TGG 0.434292 4:-76418854 None:intergenic
TTTATAATTTACCTAGGGTA+TGG 0.441482 4:-76418988 None:intergenic
ATGTTGTTATCACAGTTGTT+GGG 0.446092 4:-76419530 None:intergenic
AGCATGAAGTCTTGATAGTA+AGG 0.462405 4:-76418278 None:intergenic
CGCATTGCCTCTTAGGGAAG+TGG 0.472239 4:-76419580 None:intergenic
GTATTAGTAGTATGTGTTGT+TGG 0.475446 4:-76419723 None:intergenic
GGTGTAGATAGCAAATTAGA+AGG 0.479581 4:-76419618 None:intergenic
CACCTACTCCTTTCTCATAT+GGG 0.481494 4:+76419637 MsG0480022760.01.T01:CDS
AGATGAGTTAAGTGTAGCAA+GGG 0.485632 4:-76418594 None:intergenic
AATTCCTCATCTTCTGAAGC+TGG 0.488007 4:+76418623 MsG0480022760.01.T01:CDS
TGAAGGAGTCCATATTGATC+AGG 0.488151 4:-76419819 None:intergenic
TGTTGGTTGAGTGATATTGA+AGG 0.491271 4:-76419706 None:intergenic
CCTCTTAGGGAAGTGGGGAC+AGG 0.494658 4:-76419573 None:intergenic
TGGAAGGGACAATGTCTTGA+AGG 0.497629 4:-76419836 None:intergenic
GGAAATCAAAAGCCTTCAGC+TGG 0.499259 4:+76418548 MsG0480022760.01.T01:CDS
GATTAATAATTAGTTGTGGT+TGG 0.509207 4:-76419874 None:intergenic
TAGATGAGTTAAGTGTAGCA+AGG 0.516970 4:-76418595 None:intergenic
CCTGTCCCCACTTCCCTAAG+AGG 0.516979 4:+76419573 MsG0480022760.01.T01:CDS
GAAGTTGATCAGCTAGAAGA+TGG 0.517078 4:+76418922 MsG0480022760.01.T01:CDS
AAACTCATATTATAAGATGA+TGG 0.521201 4:-76418416 None:intergenic
TGTGGTGGTGCATGTGGAGA+AGG 0.522721 4:-76419680 None:intergenic
AGTTTCACTGAAAGTTTACA+AGG 0.526044 4:+76418434 MsG0480022760.01.T01:CDS
ACCAAGGTGGATAAGAAGAA+AGG 0.531162 4:+76418853 MsG0480022760.01.T01:CDS
ACTATCTCCTTCTTCATCAG+AGG 0.542665 4:+76418505 MsG0480022760.01.T01:CDS
ACTGTGATAACAACATATGA+AGG 0.544058 4:+76419537 MsG0480022760.01.T01:CDS
AGGTGTTGTGGTGGTGCATG+TGG 0.547185 4:-76419686 None:intergenic
GAGTGATATTGAAGGTGTTG+TGG 0.553555 4:-76419698 None:intergenic
TTTGTCATGAAAGCAAACCT+TGG 0.560103 4:-76418895 None:intergenic
GCATTGCCTCTTAGGGAAGT+GGG 0.561932 4:-76419579 None:intergenic
GTTGGTCCTGTTGAGGAACA+TGG 0.565768 4:-76419856 None:intergenic
AAGTTTGACCCATATGAGAA+AGG 0.572488 4:-76419645 None:intergenic
TGAATAAATGGAACCAGCAA+CGG 0.572616 4:-76419745 None:intergenic
GAAAGGAGAGAAGAAGCAGA+AGG 0.575055 4:+76418870 MsG0480022760.01.T01:CDS
ATGTGGAGAAGGAGATCTTG+AGG 0.575636 4:-76419669 None:intergenic
TGTGGAGAAGGAGATCTTGA+GGG 0.577615 4:-76419668 None:intergenic
TCCTCCAGCTTCAGAAGATG+AGG 0.581022 4:-76418627 None:intergenic
TCCTGTTGAGGAACATGGAA+GGG 0.589573 4:-76419851 None:intergenic
AGTTGTGGTTGGTCCTGTTG+AGG 0.591010 4:-76419863 None:intergenic
AGCTAGAAGATGGATACAGA+TGG 0.593410 4:+76418932 MsG0480022760.01.T01:CDS
AGAAGAAGCAGAAGGAACCA+AGG 0.601386 4:+76418878 MsG0480022760.01.T01:CDS
TCAAGAATAGTCCATACCCT+AGG 0.603668 4:+76418977 MsG0480022760.01.T01:CDS
AAGTTTACAAGGAGGAAACA+TGG 0.604167 4:+76418445 MsG0480022760.01.T01:CDS
TGATGAATCTAAGTTATGAA+AGG 0.609474 4:-76418375 None:intergenic
TCAGCTGGAGAATTAGGTGG+TGG 0.610560 4:+76418563 MsG0480022760.01.T01:CDS
CCACCTAATTCTCCAGCTGA+AGG 0.620428 4:-76418560 None:intergenic
GTCCTGTTGAGGAACATGGA+AGG 0.623164 4:-76419852 None:intergenic
GACCCATATGAGAAAGGAGT+AGG 0.632698 4:-76419639 None:intergenic
ACTCCAAAAGAAGTTGCAAG+TGG 0.634162 4:-76418482 None:intergenic
AGGAGTCCATATTGATCAGG+AGG 0.634490 4:-76419816 None:intergenic
TCTTGATTAATAATTAGTTG+TGG 0.637795 4:-76419878 None:intergenic
TGATATTGAAGGTGTTGTGG+TGG 0.638159 4:-76419695 None:intergenic
TCCTCATCTTCTGAAGCTGG+AGG 0.647810 4:+76418626 MsG0480022760.01.T01:CDS
GGGCAGGTTAAAGAAGAACC+AGG 0.654664 4:+76418689 MsG0480022760.01.T01:CDS
TTCACTGAAAGTTTACAAGG+AGG 0.659840 4:+76418437 MsG0480022760.01.T01:CDS
CCTTCAGCTGGAGAATTAGG+TGG 0.660060 4:+76418560 MsG0480022760.01.T01:CDS
CATTGCCTCTTAGGGAAGTG+GGG 0.682570 4:-76419578 None:intergenic
GAAATACAGGAACACCAAGG+TGG 0.704287 4:+76418840 MsG0480022760.01.T01:intron
CACTTCCCTAAGAGGCAATG+CGG 0.742780 4:+76419581 MsG0480022760.01.T01:CDS
AATGAAATACAGGAACACCA+AGG 0.750672 4:+76418837 MsG0480022760.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTACTTAATATATGTTT+TGG + Chr4:76418814-76418833 MsG0480022760.01.T01:intron 10.0%
!! AAACTCATATTATAAGATGA+TGG - Chr4:76418419-76418438 None:intergenic 20.0%
!! AACTGTTTATAATTTACCTA+GGG - Chr4:76418996-76419015 None:intergenic 20.0%
!! ATATATATTAATGTCTCTCT+TGG - Chr4:76419228-76419247 None:intergenic 20.0%
!! GAAAGAGAAAGAAAAATATT+GGG + Chr4:76418669-76418688 MsG0480022760.01.T01:CDS 20.0%
!! TAAAAACAAAAGGAAATGAA+AGG + Chr4:76419266-76419285 MsG0480022760.01.T01:intron 20.0%
!! TATATATTAATGTCTCTCTT+GGG - Chr4:76419227-76419246 None:intergenic 20.0%
!!! TATTGACTTTGTTTTAATAG+TGG - Chr4:76419041-76419060 None:intergenic 20.0%
! AATGTTGTTGTGTGAATAAA+TGG - Chr4:76419760-76419779 None:intergenic 25.0%
! AGACAATTAAGTTAAAGAAG+AGG - Chr4:76418750-76418769 None:intergenic 25.0%
! CAACTGTTTATAATTTACCT+AGG - Chr4:76418997-76419016 None:intergenic 25.0%
! GGAAAGAGAAAGAAAAATAT+TGG + Chr4:76418668-76418687 MsG0480022760.01.T01:CDS 25.0%
! TACTTGATGTAATTTGAACA+TGG - Chr4:76419313-76419332 None:intergenic 25.0%
! TAGACTATAGAGTATAGTAT+AGG - Chr4:76419097-76419116 None:intergenic 25.0%
! TCATAGCTAGTAAAAACAAA+AGG + Chr4:76419256-76419275 MsG0480022760.01.T01:intron 25.0%
! TGATGAATCTAAGTTATGAA+AGG - Chr4:76418378-76418397 None:intergenic 25.0%
! TTATAAACAGTTGCATTCAA+TGG + Chr4:76419004-76419023 MsG0480022760.01.T01:intron 25.0%
! TTTATAATTTACCTAGGGTA+TGG - Chr4:76418991-76419010 None:intergenic 25.0%
!!! CTTTGTTTTAATAGTGGTAA+TGG - Chr4:76419035-76419054 None:intergenic 25.0%
!!! TATGTTTTGGAATGAAATAC+AGG + Chr4:76418827-76418846 MsG0480022760.01.T01:intron 25.0%
AAACCCTTGAGTTTAATTGA+TGG + Chr4:76418774-76418793 MsG0480022760.01.T01:intron 30.0%
ACTGTGATAACAACATATGA+AGG + Chr4:76419537-76419556 MsG0480022760.01.T01:CDS 30.0%
AGTTTCACTGAAAGTTTACA+AGG + Chr4:76418434-76418453 MsG0480022760.01.T01:CDS 30.0%
ATGTTGTTATCACAGTTGTT+GGG - Chr4:76419533-76419552 None:intergenic 30.0%
GAAATGAAAGGAAAGTCAAA+AGG + Chr4:76419278-76419297 MsG0480022760.01.T01:intron 30.0%
GTATTAGTAGTATGTGTTGT+TGG - Chr4:76419726-76419745 None:intergenic 30.0%
TATGTTGTTATCACAGTTGT+TGG - Chr4:76419534-76419553 None:intergenic 30.0%
TCTAGTTACCATCAAAACAA+TGG + Chr4:76419355-76419374 MsG0480022760.01.T01:intron 30.0%
! TCTTGATAGTAAGGTTGTTT+AGG - Chr4:76418272-76418291 None:intergenic 30.0%
!! GAAATTGCATTTGATTTTGC+AGG + Chr4:76419442-76419461 MsG0480022760.01.T01:intron 30.0%
!! GACAAGAAAGCTCTAAAAAT+GGG + Chr4:76418711-76418730 MsG0480022760.01.T01:CDS 30.0%
!! GATGATGGATCAAAGTAATT+AGG - Chr4:76418404-76418423 None:intergenic 30.0%
!!! GTTTTTTCTTCTGTTGATCA+AGG + Chr4:76418527-76418546 MsG0480022760.01.T01:CDS 30.0%
AAGTTTACAAGGAGGAAACA+TGG + Chr4:76418445-76418464 MsG0480022760.01.T01:CDS 35.0%
AAGTTTGACCCATATGAGAA+AGG - Chr4:76419648-76419667 None:intergenic 35.0%
AATGAAATACAGGAACACCA+AGG + Chr4:76418837-76418856 MsG0480022760.01.T01:intron 35.0%
AGATGAGTTAAGTGTAGCAA+GGG - Chr4:76418597-76418616 None:intergenic 35.0%
CAAGTATACAACTCTAGCTA+GGG + Chr4:76419327-76419346 MsG0480022760.01.T01:intron 35.0%
GAAAAAACCTCTGATGAAGA+AGG - Chr4:76418515-76418534 None:intergenic 35.0%
GAGAAAGAAAAATATTGGGC+AGG + Chr4:76418673-76418692 MsG0480022760.01.T01:CDS 35.0%
GCACCATCAATTAAACTCAA+GGG - Chr4:76418780-76418799 None:intergenic 35.0%
GGATACAGATGGAGAAAATA+TGG + Chr4:76418943-76418962 MsG0480022760.01.T01:CDS 35.0%
GGTGTAGATAGCAAATTAGA+AGG - Chr4:76419621-76419640 None:intergenic 35.0%
TAGATGAGTTAAGTGTAGCA+AGG - Chr4:76418598-76418617 None:intergenic 35.0%
TCAAGTATACAACTCTAGCT+AGG + Chr4:76419326-76419345 MsG0480022760.01.T01:intron 35.0%
TGAATAAATGGAACCAGCAA+CGG - Chr4:76419748-76419767 None:intergenic 35.0%
TGCACCATCAATTAAACTCA+AGG - Chr4:76418781-76418800 None:intergenic 35.0%
TTCACTGAAAGTTTACAAGG+AGG + Chr4:76418437-76418456 MsG0480022760.01.T01:CDS 35.0%
TTTGTCATGAAAGCAAACCT+TGG - Chr4:76418898-76418917 None:intergenic 35.0%
! AGCATGAAGTCTTGATAGTA+AGG - Chr4:76418281-76418300 None:intergenic 35.0%
! TGTTGGTTGAGTGATATTGA+AGG - Chr4:76419709-76419728 None:intergenic 35.0%
!! GGACAAGAAAGCTCTAAAAA+TGG + Chr4:76418710-76418729 MsG0480022760.01.T01:CDS 35.0%
!!! TACACAAGCCATTGTTTTGA+TGG - Chr4:76419366-76419385 None:intergenic 35.0%
!!! TTTTTAGAGCTTTCTTGTCC+TGG - Chr4:76418710-76418729 None:intergenic 35.0%
AATGTCTCTCTTGGGAACAT+GGG - Chr4:76419219-76419238 None:intergenic 40.0%
ACACCTACTCCTTTCTCATA+TGG + Chr4:76419636-76419655 MsG0480022760.01.T01:CDS 40.0%
ACCAAGGTGGATAAGAAGAA+AGG + Chr4:76418853-76418872 MsG0480022760.01.T01:CDS 40.0%
ACTATCTCCTTCTTCATCAG+AGG + Chr4:76418505-76418524 MsG0480022760.01.T01:CDS 40.0%
ACTCCAAAAGAAGTTGCAAG+TGG - Chr4:76418485-76418504 None:intergenic 40.0%
AGCTAGAAGATGGATACAGA+TGG + Chr4:76418932-76418951 MsG0480022760.01.T01:CDS 40.0%
CAACTTCCTCCTGATCAATA+TGG + Chr4:76419810-76419829 MsG0480022760.01.T01:CDS 40.0%
CACCTACTCCTTTCTCATAT+GGG + Chr4:76419637-76419656 MsG0480022760.01.T01:CDS 40.0%
CATACTACTAATACCGTTGC+TGG + Chr4:76419732-76419751 MsG0480022760.01.T01:CDS 40.0%
GGAGTAGAAGAAGAAGATTC+AGG + Chr4:76418647-76418666 MsG0480022760.01.T01:CDS 40.0%
TAATGTCTCTCTTGGGAACA+TGG - Chr4:76419220-76419239 None:intergenic 40.0%
TCAAGAATAGTCCATACCCT+AGG + Chr4:76418977-76418996 MsG0480022760.01.T01:CDS 40.0%
TCCTTTCTTCTTATCCACCT+TGG - Chr4:76418857-76418876 None:intergenic 40.0%
TGAAGGAGTCCATATTGATC+AGG - Chr4:76419822-76419841 None:intergenic 40.0%
! GAAGTTGATCAGCTAGAAGA+TGG + Chr4:76418922-76418941 MsG0480022760.01.T01:CDS 40.0%
! GATTTTGCAGGAGCTATTAC+AGG + Chr4:76419454-76419473 MsG0480022760.01.T01:intron 40.0%
! TCACCACTTGCAACTTCTTT+TGG + Chr4:76418479-76418498 MsG0480022760.01.T01:CDS 40.0%
!! AATTCCTCATCTTCTGAAGC+TGG + Chr4:76418623-76418642 MsG0480022760.01.T01:CDS 40.0%
!! GAGTGATATTGAAGGTGTTG+TGG - Chr4:76419701-76419720 None:intergenic 40.0%
!! TGATATTGAAGGTGTTGTGG+TGG - Chr4:76419698-76419717 None:intergenic 40.0%
AAGCCTTCAGCTGGAGAATT+AGG + Chr4:76418557-76418576 MsG0480022760.01.T01:CDS 45.0%
AGAAGAAGCAGAAGGAACCA+AGG + Chr4:76418878-76418897 MsG0480022760.01.T01:CDS 45.0%
AGGAGTCCATATTGATCAGG+AGG - Chr4:76419819-76419838 None:intergenic 45.0%
ATGTCTCTCTTGGGAACATG+GGG - Chr4:76419218-76419237 None:intergenic 45.0%
ATGTGGAGAAGGAGATCTTG+AGG - Chr4:76419672-76419691 None:intergenic 45.0%
GAAAGGAGAGAAGAAGCAGA+AGG + Chr4:76418870-76418889 MsG0480022760.01.T01:CDS 45.0%
GAAATACAGGAACACCAAGG+TGG + Chr4:76418840-76418859 MsG0480022760.01.T01:intron 45.0%
GACCCATATGAGAAAGGAGT+AGG - Chr4:76419642-76419661 None:intergenic 45.0%
GGAAATCAAAAGCCTTCAGC+TGG + Chr4:76418548-76418567 MsG0480022760.01.T01:CDS 45.0%
TCCTGTTGAGGAACATGGAA+GGG - Chr4:76419854-76419873 None:intergenic 45.0%
TGGAAGGGACAATGTCTTGA+AGG - Chr4:76419839-76419858 None:intergenic 45.0%
TGTGGAGAAGGAGATCTTGA+GGG - Chr4:76419671-76419690 None:intergenic 45.0%
CACTTCCCTAAGAGGCAATG+CGG + Chr4:76419581-76419600 MsG0480022760.01.T01:CDS 50.0%
CATTGCCTCTTAGGGAAGTG+GGG - Chr4:76419581-76419600 None:intergenic 50.0%
CCACCTAATTCTCCAGCTGA+AGG - Chr4:76418563-76418582 None:intergenic 50.0%
CCTTCAGCTGGAGAATTAGG+TGG + Chr4:76418560-76418579 MsG0480022760.01.T01:CDS 50.0%
GCATTGCCTCTTAGGGAAGT+GGG - Chr4:76419582-76419601 None:intergenic 50.0%
GGGCAGGTTAAAGAAGAACC+AGG + Chr4:76418689-76418708 MsG0480022760.01.T01:CDS 50.0%
GTCCTGTTGAGGAACATGGA+AGG - Chr4:76419855-76419874 None:intergenic 50.0%
GTTGGTCCTGTTGAGGAACA+TGG - Chr4:76419859-76419878 None:intergenic 50.0%
TCAGCTGGAGAATTAGGTGG+TGG + Chr4:76418563-76418582 MsG0480022760.01.T01:CDS 50.0%
TCCCTTCCATGTTCCTCAAC+AGG + Chr4:76419850-76419869 MsG0480022760.01.T01:CDS 50.0%
TCCTCCAGCTTCAGAAGATG+AGG - Chr4:76418630-76418649 None:intergenic 50.0%
! AGTTGTGGTTGGTCCTGTTG+AGG - Chr4:76419866-76419885 None:intergenic 50.0%
!! TCCTCATCTTCTGAAGCTGG+AGG + Chr4:76418626-76418645 MsG0480022760.01.T01:CDS 50.0%
CGCATTGCCTCTTAGGGAAG+TGG - Chr4:76419583-76419602 None:intergenic 55.0%
TGCAGCCGCATTGCCTCTTA+GGG - Chr4:76419589-76419608 None:intergenic 55.0%
TTGCAGCCGCATTGCCTCTT+AGG - Chr4:76419590-76419609 None:intergenic 55.0%
! AGGTGTTGTGGTGGTGCATG+TGG - Chr4:76419689-76419708 None:intergenic 55.0%
! TGTGGTGGTGCATGTGGAGA+AGG - Chr4:76419683-76419702 None:intergenic 55.0%
CCTCTTAGGGAAGTGGGGAC+AGG - Chr4:76419576-76419595 None:intergenic 60.0%
CCTGTCCCCACTTCCCTAAG+AGG + Chr4:76419573-76419592 MsG0480022760.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 76418257 76419887 76418257 ID=MsG0480022760.01;Name=MsG0480022760.01
Chr4 mRNA 76418257 76419887 76418257 ID=MsG0480022760.01.T01;Parent=MsG0480022760.01;Name=MsG0480022760.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|3|0|349
Chr4 exon 76418257 76418732 76418257 ID=MsG0480022760.01.T01:exon:23283;Parent=MsG0480022760.01.T01
Chr4 exon 76418849 76418998 76418849 ID=MsG0480022760.01.T01:exon:23284;Parent=MsG0480022760.01.T01
Chr4 exon 76419464 76419887 76419464 ID=MsG0480022760.01.T01:exon:23285;Parent=MsG0480022760.01.T01
Chr4 CDS 76418257 76418732 76418257 ID=MsG0480022760.01.T01:cds;Parent=MsG0480022760.01.T01
Chr4 CDS 76418849 76418998 76418849 ID=MsG0480022760.01.T01:cds;Parent=MsG0480022760.01.T01
Chr4 CDS 76419464 76419887 76419464 ID=MsG0480022760.01.T01:cds;Parent=MsG0480022760.01.T01
Gene Sequence

>MsG0480022760.01.T01

ATGTCTGATGAACCTAAACAACCTTACTATCAAGACTTCATGCTAGATCATAATTATCATCATCAGAAAATAGATCAAGAATCTAACAGCATGTACTCATGTGAAAAACAATTTTCAACCTTTCATAACTTAGATTCATCACAACCTAATTACTTTGATCCATCATCTTATAATATGAGTTTCACTGAAAGTTTACAAGGAGGAAACATGGATCACTACAATTCACCACTTGCAACTTCTTTTGGAGTACTATCTCCTTCTTCATCAGAGGTTTTTTCTTCTGTTGATCAAGGAAATCAAAAGCCTTCAGCTGGAGAATTAGGTGGTGGTGATCAAACCCTTGCTACACTTAACTCATCTATCTCTAATTCCTCATCTTCTGAAGCTGGAGGAGTAGAAGAAGAAGATTCAGGAAAGAGAAAGAAAAATATTGGGCAGGTTAAAGAAGAACCAGGACAAGAAAGCTCTAAAAATGGGAACACCAAGGTGGATAAGAAGAAAGGAGAGAAGAAGCAGAAGGAACCAAGGTTTGCTTTCATGACAAAGAGTGAAGTTGATCAGCTAGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGTCCATACCCTAGGAGCTATTACAGGTGTACAACACAGAAATGTACAGTGAAAAAACGCGTAGAAAGATCATATGAAGACCCAACAACTGTGATAACAACATATGAAGGTCAGCATAATCATCCTGTCCCCACTTCCCTAAGAGGCAATGCGGCTGCAATGTTCACACCTTCTAATTTGCTATCTACACCTACTCCTTTCTCATATGGGTCAAACTTCCCTCAAGATCTCCTTCTCCACATGCACCACCACAACACCTTCAATATCACTCAACCAACAACACATACTACTAATACCGTTGCTGGTTCCATTTATTCACACAACAACATTAACAACTCACTTCTTCAACAATATCAACAACAACTTCCTCCTGATCAATATGGACTCCTTCAAGACATTGTCCCTTCCATGTTCCTCAACAGGACCAACCACAACTAA

Protein sequence

>MsG0480022760.01.T01

MSDEPKQPYYQDFMLDHNYHHQKIDQESNSMYSCEKQFSTFHNLDSSQPNYFDPSSYNMSFTESLQGGNMDHYNSPLATSFGVLSPSSSEVFSSVDQGNQKPSAGELGGGDQTLATLNSSISNSSSSEAGGVEEEDSGKRKKNIGQVKEEPGQESSKNGNTKVDKKKGEKKQKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYEDPTTVITTYEGQHNHPVPTSLRGNAAAMFTPSNLLSTPTPFSYGSNFPQDLLLHMHHHNTFNITQPTTHTTNTVAGSIYSHNNINNSLLQQYQQQLPPDQYGLLQDIVPSMFLNRTNHN*