AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040143.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040143.01.T01 MTR_7g085220 71.552 116 5 1 31 118 55 170 1.47e-51 166
MsG0780040143.01.T01 MTR_2g080010 53.968 126 16 3 31 121 62 180 6.23e-36 125
MsG0780040143.01.T01 MTR_2157s0010 54.839 124 17 2 31 121 55 172 8.23e-35 121
MsG0780040143.01.T01 MTR_4g089135 50.735 136 13 3 31 119 62 190 1.00e-32 117
MsG0780040143.01.T01 MTR_8g059170 55.263 114 16 4 32 119 62 166 3.36e-31 113
MsG0780040143.01.T01 MTR_5g041940 52.991 117 18 3 32 120 51 158 1.15e-30 110
MsG0780040143.01.T01 MTR_2g079990 47.482 139 26 4 4 118 50 165 2.81e-30 111
MsG0780040143.01.T01 MTR_3g088110 52.679 112 16 2 33 117 56 157 6.15e-30 108
MsG0780040143.01.T01 MTR_2g093810 51.754 114 20 3 32 117 62 168 8.95e-29 106
MsG0780040143.01.T01 MTR_4g081870 49.573 117 22 2 32 120 57 164 1.99e-28 104
MsG0780040143.01.T01 MTR_7g100990 51.304 115 21 3 31 117 58 165 4.40e-28 105
MsG0780040143.01.T01 MTR_8g094580 50.877 114 16 4 33 117 2 104 8.09e-28 102
MsG0780040143.01.T01 MTR_8g094580 50.000 114 17 3 33 117 56 158 2.92e-27 102
MsG0780040143.01.T01 MTR_3g096920 52.778 108 14 2 37 117 60 157 3.04e-27 102
MsG0780040143.01.T01 MTR_2g079990 56.250 96 19 3 4 99 50 122 1.79e-25 99.0
MsG0780040143.01.T01 MTR_6g084430 47.706 109 26 4 32 118 53 152 5.82e-23 91.3
MsG0780040143.01.T01 MTR_3g109340 44.037 109 32 2 32 118 70 171 5.14e-22 89.4
MsG0780040143.01.T01 MTR_3g109340 43.636 110 32 2 32 118 70 172 5.62e-22 89.0
MsG0780040143.01.T01 MTR_3g096920 68.254 63 10 1 37 99 60 112 1.09e-21 87.8
MsG0780040143.01.T01 MTR_7g085260 59.420 69 23 1 32 100 65 128 4.03e-21 87.0
MsG0780040143.01.T01 MTR_1g008740 49.462 93 36 3 32 120 62 147 1.39e-20 85.1
MsG0780040143.01.T01 MTR_1g008740 49.462 93 36 3 32 120 76 161 1.55e-20 85.1
MsG0780040143.01.T01 MTR_6g011860 39.167 120 32 2 33 119 64 175 1.60e-20 85.5
MsG0780040143.01.T01 MTR_4g108760 43.363 113 29 4 32 118 65 168 1.74e-20 85.1
MsG0780040143.01.T01 MTR_6g032770 42.609 115 33 3 32 120 66 173 1.80e-20 85.1
MsG0780040143.01.T01 MTR_5g040420 41.176 119 31 3 33 119 63 174 1.96e-20 85.1
MsG0780040143.01.T01 MTR_2g078700 41.739 115 34 3 32 120 71 178 4.90e-20 84.0
MsG0780040143.01.T01 MTR_8g467490 40.000 120 32 3 33 119 63 175 6.36e-20 84.0
MsG0780040143.01.T01 MTR_3g435150 41.593 113 31 3 32 118 64 167 2.07e-19 81.6
MsG0780040143.01.T01 MTR_3g064580 43.925 107 26 3 39 120 63 160 2.12e-19 82.8
MsG0780040143.01.T01 MTR_4g134460 41.964 112 31 4 33 120 103 204 2.58e-19 82.4
MsG0780040143.01.T01 MTR_4g035590 36.364 143 48 5 1 120 37 159 2.92e-19 81.6
MsG0780040143.01.T01 MTR_5g076850 43.119 109 29 3 36 120 60 159 3.00e-19 82.4
MsG0780040143.01.T01 MTR_6g012670 39.823 113 33 3 32 118 68 171 3.76e-19 80.9
MsG0780040143.01.T01 MTR_4g036030 42.718 103 28 3 37 117 63 156 6.78e-19 80.5
MsG0780040143.01.T01 MTR_5g069030 39.130 115 37 3 29 119 72 177 2.02e-18 80.1
MsG0780040143.01.T01 MTR_3g116070 55.882 68 23 2 33 100 73 133 2.19e-18 79.3
MsG0780040143.01.T01 MTR_4g075980 39.640 111 41 3 28 118 58 162 2.45e-18 78.6
MsG0780040143.01.T01 MTR_2g062730 33.824 136 49 4 7 120 47 163 3.11e-18 78.6
MsG0780040143.01.T01 MTR_1g069805 38.095 105 38 2 33 117 59 156 3.68e-18 77.8
MsG0780040143.01.T01 MTR_2g064090 41.905 105 27 3 39 118 63 158 4.36e-18 78.2
MsG0780040143.01.T01 MTR_8g024480 34.932 146 42 5 7 119 52 177 4.82e-18 78.6
MsG0780040143.01.T01 MTR_1g096430 37.190 121 54 4 3 121 40 140 1.31e-17 77.0
MsG0780040143.01.T01 MTR_6g477900 38.889 108 33 3 37 120 61 159 2.87e-17 74.7
MsG0780040143.01.T01 MTR_7g097090 38.835 103 36 3 33 115 59 154 3.09e-17 75.5
MsG0780040143.01.T01 MTR_3g093050 39.130 115 37 3 29 119 69 174 4.68e-17 75.9
MsG0780040143.01.T01 MTR_7g011130 51.852 81 28 3 33 111 68 139 5.17e-17 75.5
MsG0780040143.01.T01 MTR_2g064470 33.333 129 48 3 19 118 40 159 5.64e-17 75.1
MsG0780040143.01.T01 MTR_3g093050 39.130 115 37 3 29 119 69 174 5.65e-17 75.9
MsG0780040143.01.T01 MTR_5g014300 48.052 77 36 2 37 111 61 135 9.62e-17 74.7
MsG0780040143.01.T01 MTR_5g012080 38.462 104 33 3 37 117 63 158 1.74e-16 73.9
MsG0780040143.01.T01 MTR_3g093040 37.391 115 39 3 29 119 155 260 2.25e-16 73.6
MsG0780040143.01.T01 MTR_4g101680 38.835 103 32 3 37 117 63 156 2.79e-16 73.6
MsG0780040143.01.T01 MTR_7g005280 41.748 103 31 3 37 117 65 160 3.71e-16 72.0
MsG0780040143.01.T01 MTR_5g021710 38.835 103 32 3 37 117 64 157 1.04e-15 72.0
MsG0780040143.01.T01 MTR_8g076110 37.864 103 33 3 37 117 62 155 1.62e-15 70.9
MsG0780040143.01.T01 MTR_3g070030 35.965 114 37 2 33 119 68 172 1.66e-15 71.2
MsG0780040143.01.T01 MTR_2g086880 47.619 63 24 1 37 99 72 125 3.85e-15 70.5
MsG0780040143.01.T01 MTR_1g097300 48.649 74 26 3 29 99 63 127 5.87e-15 70.1
MsG0780040143.01.T01 MTR_7g011120 52.239 67 23 1 33 99 57 114 6.55e-15 69.3
MsG0780040143.01.T01 MTR_5g090970 33.607 122 42 2 29 117 62 177 1.56e-14 68.2
MsG0780040143.01.T01 MTR_2g086880 47.619 63 24 1 37 99 72 125 1.68e-14 68.6
MsG0780040143.01.T01 MTR_5g090970 35.772 123 39 3 29 117 62 178 2.78e-14 67.8
MsG0780040143.01.T01 MTR_8g023840 50.000 64 25 1 36 99 66 122 3.24e-14 67.8
MsG0780040143.01.T01 MTR_2g068880 41.379 87 44 2 36 120 75 156 4.75e-14 67.0
MsG0780040143.01.T01 MTR_2g068920 41.379 87 44 2 36 120 74 155 4.83e-14 66.6
MsG0780040143.01.T01 MTR_8g063550 38.824 85 41 2 29 111 53 128 1.28e-13 66.2
MsG0780040143.01.T01 MTR_8g063550 38.824 85 41 2 29 111 53 128 1.78e-13 65.9
MsG0780040143.01.T01 MTR_1g090720 31.967 122 44 2 29 120 89 201 3.64e-13 64.7
MsG0780040143.01.T01 MTR_0036s0150 35.398 113 41 3 29 118 53 156 7.02e-13 63.9
MsG0780040143.01.T01 MTR_8g063550 38.824 85 41 2 29 111 53 128 9.18e-13 63.5
MsG0780040143.01.T01 MTR_4g098630 44.000 75 34 2 39 111 63 131 1.90e-12 62.4
MsG0780040143.01.T01 MTR_7g070140 45.312 64 28 1 37 100 17 73 3.47e-12 59.3
MsG0780040143.01.T01 MTR_1g090723 35.135 111 40 3 31 118 58 159 3.49e-12 62.0
MsG0780040143.01.T01 MTR_1g090723 35.135 111 40 3 31 118 58 159 3.76e-12 62.0
MsG0780040143.01.T01 MTR_1g090723 34.513 113 39 3 31 118 58 160 4.52e-12 61.6
MsG0780040143.01.T01 MTR_4g052620 43.750 64 28 1 37 100 63 118 2.06e-11 59.3
MsG0780040143.01.T01 MTR_3g096140 37.179 78 38 2 36 111 61 129 4.39e-11 58.5
MsG0780040143.01.T01 MTR_8g093580 37.179 78 38 2 36 111 60 128 4.80e-11 58.9
MsG0780040143.01.T01 MTR_3g096140 37.179 78 38 2 36 111 40 108 7.07e-11 58.2
MsG0780040143.01.T01 MTR_3g096140 37.179 78 38 2 36 111 61 129 7.11e-11 58.2
MsG0780040143.01.T01 MTR_2g086690 40.323 62 29 1 38 99 64 117 9.43e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040143.01.T01 AT3G04070 51.064 141 30 5 15 120 37 173 5.08e-34 120
MsG0780040143.01.T01 AT3G15510 52.800 125 17 2 31 120 64 181 1.30e-33 120
MsG0780040143.01.T01 AT3G04070 47.134 157 28 4 15 120 37 189 2.07e-33 119
MsG0780040143.01.T01 AT1G61110 51.200 125 17 3 31 119 63 179 1.93e-31 113
MsG0780040143.01.T01 AT4G27410 47.857 140 37 5 7 119 51 181 1.96e-31 113
MsG0780040143.01.T01 AT4G27410 54.867 113 18 3 31 119 61 164 2.58e-31 112
MsG0780040143.01.T01 AT3G15500 54.955 111 17 3 31 117 61 162 1.15e-30 111
MsG0780040143.01.T01 AT1G52890 52.252 111 20 2 31 117 61 162 6.19e-30 109
MsG0780040143.01.T01 AT1G52880 52.893 121 20 2 31 119 64 179 9.05e-30 109
MsG0780040143.01.T01 AT1G77450 52.174 115 18 3 33 120 59 163 9.08e-30 107
MsG0780040143.01.T01 AT1G69490 51.304 115 19 2 31 117 56 161 1.97e-29 107
MsG0780040143.01.T01 AT1G01720 51.327 113 17 2 33 117 56 158 6.38e-29 106
MsG0780040143.01.T01 AT5G08790 50.000 112 17 2 35 117 58 159 2.27e-28 104
MsG0780040143.01.T01 AT5G63790 50.000 114 18 3 33 117 99 202 1.01e-26 101
MsG0780040143.01.T01 AT5G63790 50.000 114 18 3 33 117 109 212 1.06e-26 101
MsG0780040143.01.T01 AT3G18400 40.800 125 38 3 21 118 38 153 7.88e-22 88.2
MsG0780040143.01.T01 AT2G24430 41.818 110 34 2 32 118 64 166 5.09e-21 85.9
MsG0780040143.01.T01 AT2G24430 41.818 110 34 2 32 118 64 166 5.09e-21 85.9
MsG0780040143.01.T01 AT5G18270 42.609 115 32 3 31 119 68 174 6.05e-21 86.3
MsG0780040143.01.T01 AT1G76420 39.496 119 38 4 27 118 61 172 9.90e-21 85.5
MsG0780040143.01.T01 AT5G39610 43.750 112 28 4 32 117 68 170 1.65e-20 84.3
MsG0780040143.01.T01 AT1G26870 39.167 120 33 3 33 119 65 177 1.89e-20 85.5
MsG0780040143.01.T01 AT5G53950 40.870 115 35 3 32 120 65 172 2.34e-20 84.7
MsG0780040143.01.T01 AT5G18270 41.228 114 33 3 32 119 69 174 4.64e-20 83.6
MsG0780040143.01.T01 AT3G15170 42.609 115 33 3 32 120 68 175 5.37e-20 83.2
MsG0780040143.01.T01 AT5G61430 41.964 112 30 4 33 118 2 104 7.60e-20 82.4
MsG0780040143.01.T01 AT5G61430 41.964 112 30 4 33 118 65 167 1.71e-19 82.0
MsG0780040143.01.T01 AT5G07680 41.593 113 31 4 32 118 51 154 1.97e-19 81.6
MsG0780040143.01.T01 AT5G07680 41.593 113 31 4 32 118 65 168 2.05e-19 82.0
MsG0780040143.01.T01 AT2G02450 42.342 111 32 4 33 120 100 201 3.37e-19 82.0
MsG0780040143.01.T01 AT1G79580 35.075 134 47 3 7 119 54 168 3.79e-19 81.6
MsG0780040143.01.T01 AT1G79580 35.075 134 47 3 7 119 54 168 3.79e-19 81.6
MsG0780040143.01.T01 AT1G79580 35.075 134 47 3 7 119 54 168 3.79e-19 81.6
MsG0780040143.01.T01 AT1G79580 35.075 134 47 3 7 119 54 168 3.79e-19 81.6
MsG0780040143.01.T01 AT1G79580 35.075 134 47 3 7 119 54 168 3.79e-19 81.6
MsG0780040143.01.T01 AT3G04060 41.071 112 32 3 33 118 69 172 4.22e-19 81.3
MsG0780040143.01.T01 AT2G02450 42.342 111 32 4 33 120 100 201 4.91e-19 81.3
MsG0780040143.01.T01 AT2G17040 38.679 106 40 2 33 119 55 154 5.72e-19 80.1
MsG0780040143.01.T01 AT3G29035 59.420 69 19 2 32 100 72 131 6.07e-19 80.5
MsG0780040143.01.T01 AT4G28530 40.952 105 35 3 33 117 75 172 6.44e-19 80.9
MsG0780040143.01.T01 AT2G46770 34.211 152 43 5 7 121 53 184 1.05e-18 80.1
MsG0780040143.01.T01 AT5G62380 36.090 133 43 4 7 117 44 156 1.20e-18 80.1
MsG0780040143.01.T01 AT5G62380 36.090 133 43 4 7 117 44 156 1.20e-18 80.1
MsG0780040143.01.T01 AT1G33280 36.957 138 46 4 4 120 42 159 1.33e-18 79.3
MsG0780040143.01.T01 AT1G71930 41.071 112 42 5 3 111 42 132 1.63e-18 79.3
MsG0780040143.01.T01 AT1G71930 41.071 112 42 5 3 111 42 132 1.63e-18 79.3
MsG0780040143.01.T01 AT4G35580 41.121 107 30 3 37 119 64 161 1.71e-18 80.1
MsG0780040143.01.T01 AT4G35580 41.121 107 30 3 37 119 64 161 1.71e-18 80.1
MsG0780040143.01.T01 AT4G35580 41.121 107 30 3 37 119 64 161 1.88e-18 80.1
MsG0780040143.01.T01 AT3G17730 40.741 108 31 3 37 120 61 159 2.44e-18 77.8
MsG0780040143.01.T01 AT4G10350 36.232 138 44 5 7 120 46 163 3.57e-18 78.6
MsG0780040143.01.T01 AT5G39820 54.286 70 21 2 33 100 69 129 5.92e-18 77.8
MsG0780040143.01.T01 AT1G56010 37.168 113 35 2 33 118 2 105 7.77e-18 76.6
MsG0780040143.01.T01 AT2G43000 38.182 110 34 2 33 117 67 167 8.82e-18 76.6
MsG0780040143.01.T01 AT5G13180 43.269 104 29 2 37 117 64 160 9.71e-18 76.3
MsG0780040143.01.T01 AT1G33060 56.250 64 19 1 37 100 79 133 1.04e-17 77.8
MsG0780040143.01.T01 AT1G33060 56.250 64 19 1 37 100 79 133 1.04e-17 77.8
MsG0780040143.01.T01 AT1G65910 39.623 106 27 3 39 118 63 157 1.41e-17 77.4
MsG0780040143.01.T01 AT1G56010 37.168 113 35 2 33 118 69 172 2.24e-17 76.3
MsG0780040143.01.T01 AT1G62700 39.806 103 31 3 37 117 63 156 2.49e-17 76.6
MsG0780040143.01.T01 AT1G62700 39.806 103 31 3 37 117 63 156 2.49e-17 76.6
MsG0780040143.01.T01 AT4G10350 39.815 108 32 3 37 120 18 116 2.86e-17 75.5
MsG0780040143.01.T01 AT3G12977 36.667 120 42 4 24 118 5 115 1.15e-16 73.2
MsG0780040143.01.T01 AT3G03200 39.623 106 30 3 37 117 61 157 1.24e-16 74.7
MsG0780040143.01.T01 AT3G10480 37.719 114 38 2 31 120 76 180 1.40e-16 74.7
MsG0780040143.01.T01 AT1G32770 32.667 150 47 5 4 119 50 179 1.50e-16 74.3
MsG0780040143.01.T01 AT3G12977 39.823 113 41 5 1 111 51 138 2.47e-16 72.8
MsG0780040143.01.T01 AT5G17260 38.679 106 31 3 37 117 61 157 3.95e-16 73.6
MsG0780040143.01.T01 AT3G61910 31.788 151 46 5 7 120 48 178 4.02e-16 72.8
MsG0780040143.01.T01 AT1G34180 48.101 79 28 4 36 111 82 150 4.29e-16 73.2
MsG0780040143.01.T01 AT1G34180 48.101 79 28 4 36 111 82 150 4.53e-16 73.2
MsG0780040143.01.T01 AT1G34180 48.101 79 28 4 36 111 70 138 4.63e-16 73.2
MsG0780040143.01.T01 AT1G34180 48.101 79 28 4 36 111 70 138 4.69e-16 73.2
MsG0780040143.01.T01 AT1G12260 38.835 103 32 3 37 117 63 156 5.89e-16 72.8
MsG0780040143.01.T01 AT1G12260 38.835 103 32 3 37 117 63 156 6.09e-16 72.4
MsG0780040143.01.T01 AT4G36160 39.604 101 30 3 39 117 72 163 1.26e-15 71.6
MsG0780040143.01.T01 AT4G28530 42.353 85 25 1 33 117 75 135 1.26e-15 71.2
MsG0780040143.01.T01 AT4G36160 39.604 101 30 3 39 117 68 159 1.31e-15 71.6
MsG0780040143.01.T01 AT4G36160 39.604 101 30 3 39 117 68 159 1.31e-15 71.6
MsG0780040143.01.T01 AT2G33480 40.952 105 29 4 37 117 8 103 2.18e-15 69.3
MsG0780040143.01.T01 AT5G66300 43.902 82 33 3 37 115 68 139 2.20e-15 70.5
MsG0780040143.01.T01 AT3G10480 37.391 115 38 3 31 120 76 181 3.70e-15 70.5
MsG0780040143.01.T01 AT5G24590 50.704 71 27 2 29 99 60 122 3.78e-15 70.5
MsG0780040143.01.T01 AT2G18060 37.864 103 33 3 37 117 65 158 4.82e-15 70.1
MsG0780040143.01.T01 AT2G18060 37.864 103 33 3 37 117 65 158 4.82e-15 70.1
MsG0780040143.01.T01 AT2G33480 42.056 107 29 5 37 119 65 162 5.60e-15 69.3
MsG0780040143.01.T01 AT3G10480 37.391 115 38 3 31 120 109 214 6.08e-15 70.1
MsG0780040143.01.T01 AT5G46590 54.688 64 21 2 37 100 61 116 6.52e-15 69.3
MsG0780040143.01.T01 AT5G46590 51.562 64 23 1 37 100 61 116 7.01e-15 69.3
MsG0780040143.01.T01 AT3G49530 50.794 63 23 1 37 99 68 122 7.64e-15 69.7
MsG0780040143.01.T01 AT1G34190 49.231 65 24 2 36 100 70 125 8.20e-15 69.7
MsG0780040143.01.T01 AT3G49530 50.794 63 23 1 37 99 68 122 1.00e-14 69.3
MsG0780040143.01.T01 AT2G33480 41.284 109 29 5 37 119 65 164 1.01e-14 68.6
MsG0780040143.01.T01 AT4G17980 51.613 62 23 1 39 100 63 117 1.16e-14 68.2
MsG0780040143.01.T01 AT4G17980 51.613 62 23 1 39 100 63 117 1.41e-14 68.2
MsG0780040143.01.T01 AT5G04410 35.965 114 40 3 29 118 56 160 2.71e-14 68.2
MsG0780040143.01.T01 AT3G10490 37.615 109 34 4 37 120 82 181 5.99e-14 67.0
MsG0780040143.01.T01 AT1G32510 53.968 63 27 1 37 99 61 121 7.45e-14 66.2
MsG0780040143.01.T01 AT3G10490 37.615 109 34 4 37 120 82 181 1.63e-13 64.7
MsG0780040143.01.T01 AT1G54330 36.111 108 48 4 29 118 50 154 1.88e-13 65.5
MsG0780040143.01.T01 AT3G10500 34.211 114 42 3 29 118 56 160 2.61e-13 65.5
MsG0780040143.01.T01 AT3G12910 47.887 71 31 1 29 99 67 131 4.16e-13 64.3
MsG0780040143.01.T01 AT5G09330 34.118 85 45 2 29 111 53 128 2.73e-11 59.7
MsG0780040143.01.T01 AT5G09330 34.118 85 45 2 29 111 53 128 2.73e-11 59.7
MsG0780040143.01.T01 AT5G09330 34.118 85 45 2 29 111 53 128 2.73e-11 59.7
MsG0780040143.01.T01 AT5G09330 34.118 85 45 2 29 111 53 128 2.73e-11 59.7
MsG0780040143.01.T01 AT5G09330 34.118 85 45 2 29 111 53 128 2.73e-11 59.7
MsG0780040143.01.T01 AT2G43000 34.021 97 30 2 46 117 2 89 4.47e-11 57.8
MsG0780040143.01.T01 AT5G64060 34.118 85 45 2 29 111 53 128 5.34e-11 58.5
MsG0780040143.01.T01 AT2G27300 39.683 63 29 1 37 99 68 121 8.90e-11 58.2

Find 78 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAACAGGGCAGCTGCTTC+AGG 0.233922 7:+73634079 MsG0780040143.01.T01:CDS
ATGATGACATTGGTGTAATT+TGG 0.285260 7:-73635127 None:intergenic
TCATACTGTGAATTGATGTT+AGG 0.286405 7:-73634944 None:intergenic
CATTTGATTTCTTGTAAATT+CGG 0.295685 7:-73634513 None:intergenic
CTGTTTGGCCTTGCACCATT+TGG 0.309858 7:-73634064 None:intergenic
GGAAGGGGTTAGGACCTATT+TGG 0.316667 7:+73635232 MsG0780040143.01.T01:three_prime_UTR
TGTTCCAATTCCTGATGGTT+TGG 0.330214 7:-73634744 None:intergenic
TCAGGAATTGGAACAAGTTC+AGG 0.330328 7:+73634752 MsG0780040143.01.T01:three_prime_UTR
GAACATTATTGGTGTCAAAA+AGG 0.335100 7:+73634174 MsG0780040143.01.T01:CDS
TTAATTTGTTTGTGTGTGTT+GGG 0.336859 7:+73635352 MsG0780040143.01.T01:three_prime_UTR
TAAGTAAGATTTCTAGAAGT+TGG 0.342238 7:+73635099 MsG0780040143.01.T01:three_prime_UTR
GTTCCAATTCCTGATGGTTT+GGG 0.344698 7:-73634743 None:intergenic
CCTGAAGCAGCTGCCCTGTT+TGG 0.348250 7:-73634079 None:intergenic
AATTGTTGCTAGTGTTGATT+TGG 0.352114 7:-73634811 None:intergenic
TGTTTGGCCTTGCACCATTT+GGG 0.356073 7:-73634063 None:intergenic
GAACTCAAGTATTTCTTTGA+TGG 0.365426 7:-73634908 None:intergenic
CAAATGGTGCAAGGCCAAAC+AGG 0.366982 7:+73634065 MsG0780040143.01.T01:CDS
GTTAATTTGTTTGTGTGTGT+TGG 0.367127 7:+73635351 MsG0780040143.01.T01:three_prime_UTR
AACAGAATCATCAGAAACTA+TGG 0.378730 7:+73634548 MsG0780040143.01.T01:three_prime_UTR
ATTTATTCAGTCTTCAACTA+AGG 0.378998 7:-73635272 None:intergenic
AGATCACAAGAGAACATTAT+TGG 0.382269 7:+73634163 MsG0780040143.01.T01:CDS
TGTTTGTGCAGTTGGATGAT+TGG 0.385009 7:+73634482 MsG0780040143.01.T01:intron
AGTAGTCCATAGCATCTAAT+AGG 0.386901 7:-73634690 None:intergenic
ATTCCCAAACCATCAGGAAT+TGG 0.388329 7:+73634740 MsG0780040143.01.T01:three_prime_UTR
GGGCAGCTGCTTCAGGGTAT+TGG 0.391648 7:+73634086 MsG0780040143.01.T01:CDS
CATACTGTGAATTGATGTTA+GGG 0.411622 7:-73634943 None:intergenic
ACCAATGTCATCATTAAGTA+AGG 0.414843 7:+73635136 MsG0780040143.01.T01:three_prime_UTR
GTTTGTGCAGTTGGATGATT+GGG 0.416916 7:+73634483 MsG0780040143.01.T01:intron
CTTCATTTGGCGAGAAAGAA+TGG 0.427536 7:+73634011 MsG0780040143.01.T01:CDS
TGTACACTACTATTTCTGAT+AGG 0.428778 7:-73635324 None:intergenic
CTGAAAATTCCCAAACCATC+AGG 0.433750 7:+73634734 MsG0780040143.01.T01:three_prime_UTR
AGGAATTGAAGGAAGGGGTT+AGG 0.439356 7:+73635222 MsG0780040143.01.T01:three_prime_UTR
CCTCATCTATGTTTGAAAGC+TGG 0.441085 7:-73634874 None:intergenic
TTCAAACCTATTAGATGCTA+TGG 0.444967 7:+73634684 MsG0780040143.01.T01:three_prime_UTR
ACATGGCAATGATGCCACTA+TGG 0.444972 7:-73634131 None:intergenic
TTCATCAAAGATGCTTCATA+AGG 0.446195 7:-73634973 None:intergenic
AGCATCTAATAGGTTTGAAA+AGG 0.474398 7:-73634680 None:intergenic
AACTCAAGTATTTCTTTGAT+GGG 0.477999 7:-73634907 None:intergenic
TCAAAGTATATCTGTCGATA+CGG 0.482597 7:+73632215 MsG0780040143.01.T01:CDS
TTGTTTGTGTGTGTTGGGGT+TGG 0.491148 7:+73635357 MsG0780040143.01.T01:three_prime_UTR
GGGTTAGGACCTATTTGGTA+TGG 0.494857 7:+73635237 MsG0780040143.01.T01:three_prime_UTR
ATTGTTGCTAGTGTTGATTT+GGG 0.495042 7:-73634810 None:intergenic
AGAAACTATGGTTGGTGAAG+TGG 0.502853 7:+73634560 MsG0780040143.01.T01:three_prime_UTR
CAAACAGGGCAGCTGCTTCA+GGG 0.503732 7:+73634080 MsG0780040143.01.T01:CDS
AAGCTGGTGCTTTAAAGTGT+TGG 0.507075 7:-73634858 None:intergenic
TTTGGGTACTTTCTATCTCT+AGG 0.511526 7:-73634046 None:intergenic
TTAGTCTTAATACCCTTTGG+AGG 0.513448 7:-73634219 None:intergenic
TGCTTTAAAGTGTTGGATTG+AGG 0.514061 7:-73634851 None:intergenic
GAACTTGTTCCAATTCCTGA+TGG 0.519532 7:-73634749 None:intergenic
AGAGATAGAAAGTACCCAAA+TGG 0.527590 7:+73634049 MsG0780040143.01.T01:CDS
ATATCTCTAAATTATATCCA+TGG 0.530490 7:+73632184 MsG0780040143.01.T01:CDS
GGTCCTCATCATCAATATCA+AGG 0.532163 7:+73635012 MsG0780040143.01.T01:three_prime_UTR
TAGCTTTATGATATATACTC+TGG 0.532242 7:+73635385 MsG0780040143.01.T01:three_prime_UTR
GCATCATTGCCATGTGGAGG+AGG 0.534639 7:+73634139 MsG0780040143.01.T01:CDS
ATACTTTGACTAACTATCCA+TGG 0.540841 7:-73632201 None:intergenic
TTTACAAAGAAAACCTCCAA+AGG 0.541892 7:+73634206 MsG0780040143.01.T01:CDS
TTTCTAGGAATTGAAGGAAG+GGG 0.543794 7:+73635217 MsG0780040143.01.T01:three_prime_UTR
TTACAAAGAAAACCTCCAAA+GGG 0.544211 7:+73634207 MsG0780040143.01.T01:CDS
CAAAGTATATCTGTCGATAC+GGG 0.552881 7:+73632216 MsG0780040143.01.T01:CDS
TAGCCTTGATATTGATGATG+AGG 0.557215 7:-73635015 None:intergenic
TAATTTGTTTGTGTGTGTTG+GGG 0.564010 7:+73635353 MsG0780040143.01.T01:three_prime_UTR
TCCTTACTTAATGATGACAT+TGG 0.569887 7:-73635137 None:intergenic
TGTGATCTTCCTCCTCCACA+TGG 0.570951 7:-73634148 None:intergenic
TCAGGGTATTGGAAAGCCAC+TGG 0.577725 7:+73634097 MsG0780040143.01.T01:CDS
ATGACATTGGTGTAATTTGG+TGG 0.584558 7:-73635124 None:intergenic
AGATAAGAAGCTGCTCAACA+TGG 0.598584 7:-73634713 None:intergenic
GAATCATCAGAAACTATGGT+TGG 0.606547 7:+73634552 MsG0780040143.01.T01:three_prime_UTR
TATATCTGTCGATACGGGTG+CGG 0.610629 7:+73632221 MsG0780040143.01.T01:CDS
GATGTTAGGGAAATTGCAAG+AGG 0.615894 7:-73634930 None:intergenic
TATGGTCTTATCAGTGCCAG+TGG 0.623985 7:-73634113 None:intergenic
GAAAGTACCCAAATGGTGCA+AGG 0.625637 7:+73634056 MsG0780040143.01.T01:CDS
GAGACATGGTGTGTTTGAAG+AGG 0.627448 7:-73634645 None:intergenic
TGACATTGGTGTAATTTGGT+GGG 0.643180 7:-73635123 None:intergenic
AAATGGTGCAAGGCCAAACA+GGG 0.643288 7:+73634066 MsG0780040143.01.T01:CDS
GTGGCATCATTGCCATGTGG+AGG 0.648100 7:+73634136 MsG0780040143.01.T01:CDS
CCAGCTTTCAAACATAGATG+AGG 0.665846 7:+73634874 MsG0780040143.01.T01:three_prime_UTR
TGGCACTGATAAGACCATAG+TGG 0.666772 7:+73634117 MsG0780040143.01.T01:CDS
ATAGTGGCATCATTGCCATG+TGG 0.762428 7:+73634133 MsG0780040143.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTCATAATCTTTTTTTT+TGG - Chr7:73635071-73635090 None:intergenic 10.0%
!! AATAAACTAAGTGAAAATTT+AGG - Chr7:73632939-73632958 None:intergenic 15.0%
!! ATTCCTAGAAAAAATTAAAA+TGG - Chr7:73635208-73635227 None:intergenic 15.0%
!!! AAAAGTACATACATATATTT+TGG - Chr7:73633902-73633921 None:intergenic 15.0%
!!! ACACAAATTATATTTTCATA+TGG + Chr7:73632538-73632557 MsG0780040143.01.T01:intron 15.0%
!! AAAATTAATAATGTGTGATG+TGG + Chr7:73633940-73633959 MsG0780040143.01.T01:intron 20.0%
!! AAATACACACAAAAATTAAG+TGG + Chr7:73635043-73635062 MsG0780040143.01.T01:three_prime_UTR 20.0%
!! AAATTTATAGAATACAAACC+TGG - Chr7:73633854-73633873 None:intergenic 20.0%
!! ATATCTCTAAATTATATCCA+TGG + Chr7:73632184-73632203 MsG0780040143.01.T01:CDS 20.0%
!! ATCCAAATTCCTTAAAAAAA+AGG - Chr7:73633089-73633108 None:intergenic 20.0%
!! ATCTCAATTAGATAAGAAAT+TGG + Chr7:73633208-73633227 MsG0780040143.01.T01:intron 20.0%
!! TCTTTAATTGAGTGTTTAAA+TGG - Chr7:73632984-73633003 None:intergenic 20.0%
!! TTTCTTATCTAATTGAGATT+AGG - Chr7:73633207-73633226 None:intergenic 20.0%
!!! AATTTATTTTGATACTTCGA+GGG + Chr7:73632733-73632752 MsG0780040143.01.T01:intron 20.0%
!!! ATATTTTATCAGATGCATAT+AGG - Chr7:73632698-73632717 None:intergenic 20.0%
!!! CAAATTATATTTTCATATGG+TGG + Chr7:73632541-73632560 MsG0780040143.01.T01:intron 20.0%
!!! CATTTGATTTCTTGTAAATT+CGG - Chr7:73634516-73634535 None:intergenic 20.0%
!!! CTTAATTTTTGTGTGTATTT+TGG - Chr7:73635043-73635062 None:intergenic 20.0%
!!! GATATTTTTCATTCTTTTCA+TGG + Chr7:73635431-73635450 MsG0780040143.01.T01:three_prime_UTR 20.0%
!!! TAATTTATTTTGATACTTCG+AGG + Chr7:73632732-73632751 MsG0780040143.01.T01:intron 20.0%
!!! TAATTTTTTCTAGGAATTGA+AGG + Chr7:73635211-73635230 MsG0780040143.01.T01:three_prime_UTR 20.0%
!!! TACCTTTTTTTTAAGGAATT+TGG + Chr7:73633084-73633103 MsG0780040143.01.T01:intron 20.0%
!!! TGAAGTTGATATTTATAAGT+TGG + Chr7:73633815-73633834 MsG0780040143.01.T01:intron 20.0%
!!! TGTCCATTTTAATTTTTTCT+AGG + Chr7:73635202-73635221 MsG0780040143.01.T01:three_prime_UTR 20.0%
!!! TTAATTTACTTTTGTTGTTG+TGG + Chr7:73633967-73633986 MsG0780040143.01.T01:intron 20.0%
! AAAATCACGATATATTGTGT+TGG + Chr7:73633121-73633140 MsG0780040143.01.T01:intron 25.0%
! AAACAAGCACTTAAGTAAAT+TGG - Chr7:73633037-73633056 None:intergenic 25.0%
! AACAAGCACTTAAGTAAATT+GGG - Chr7:73633036-73633055 None:intergenic 25.0%
! AACTCAAGTATTTCTTTGAT+GGG - Chr7:73634910-73634929 None:intergenic 25.0%
! ACAGTATAGTTTCATATGTA+AGG + Chr7:73632488-73632507 MsG0780040143.01.T01:intron 25.0%
! ACATATCATAGAAAAGATGA+AGG - Chr7:73632630-73632649 None:intergenic 25.0%
! ATCTAATTGAGATTAGGTTT+AGG - Chr7:73633201-73633220 None:intergenic 25.0%
! ATTTATTCAGTCTTCAACTA+AGG - Chr7:73635275-73635294 None:intergenic 25.0%
! CATATCATAGAAAAGATGAA+GGG - Chr7:73632629-73632648 None:intergenic 25.0%
! TCTTAGACTAATGTTATTCT+TGG + Chr7:73634453-73634472 MsG0780040143.01.T01:intron 25.0%
! TTACATATGAAACTATACTG+TGG - Chr7:73632489-73632508 None:intergenic 25.0%
!! AACATTTTTCTAATACCACA+TGG + Chr7:73633677-73633696 MsG0780040143.01.T01:intron 25.0%
!! ACATTTTTCTAATACCACAT+GGG + Chr7:73633678-73633697 MsG0780040143.01.T01:intron 25.0%
!! ATATTTATAAGTTGGATCCA+TGG + Chr7:73633823-73633842 MsG0780040143.01.T01:intron 25.0%
!! ATCTCCTATCTTCTTTAAAA+TGG + Chr7:73633408-73633427 MsG0780040143.01.T01:intron 25.0%
!! TAAATATCTATTTCTCACCA+TGG + Chr7:73633345-73633364 MsG0780040143.01.T01:intron 25.0%
!! TAAGTAAGATTTCTAGAAGT+TGG + Chr7:73635099-73635118 MsG0780040143.01.T01:three_prime_UTR 25.0%
!! TTTCATTCTTTTCATGGAAA+AGG + Chr7:73635437-73635456 MsG0780040143.01.T01:three_prime_UTR 25.0%
!! TTTTCTAACAAAAACTTGAG+CGG + Chr7:73632854-73632873 MsG0780040143.01.T01:intron 25.0%
!!! ATGAATCAACAATTGCTTTT+AGG + Chr7:73634991-73635010 MsG0780040143.01.T01:three_prime_UTR 25.0%
!!! TAAGTTTTTTAGCATGTGTT+TGG - Chr7:73633176-73633195 None:intergenic 25.0%
!!! TAGCTTTATGATATATACTC+TGG + Chr7:73635385-73635404 MsG0780040143.01.T01:three_prime_UTR 25.0%
!!! TTAATTTGTTTGTGTGTGTT+GGG + Chr7:73635352-73635371 MsG0780040143.01.T01:three_prime_UTR 25.0%
AACAGAATCATCAGAAACTA+TGG + Chr7:73634548-73634567 MsG0780040143.01.T01:three_prime_UTR 30.0%
AATATCAACTTCAGCAATGA+TGG - Chr7:73633808-73633827 None:intergenic 30.0%
ACAAATGAAAAGAATGAGAG+AGG - Chr7:73633589-73633608 None:intergenic 30.0%
ACCAATGTCATCATTAAGTA+AGG + Chr7:73635136-73635155 MsG0780040143.01.T01:three_prime_UTR 30.0%
AGATCACAAGAGAACATTAT+TGG + Chr7:73634163-73634182 MsG0780040143.01.T01:CDS 30.0%
AGCATCTAATAGGTTTGAAA+AGG - Chr7:73634683-73634702 None:intergenic 30.0%
ATACTTTGACTAACTATCCA+TGG - Chr7:73632204-73632223 None:intergenic 30.0%
ATGATGACATTGGTGTAATT+TGG - Chr7:73635130-73635149 None:intergenic 30.0%
CATACTGTGAATTGATGTTA+GGG - Chr7:73634946-73634965 None:intergenic 30.0%
CTAAGTGAAAATTTAGGAGT+AGG - Chr7:73632933-73632952 None:intergenic 30.0%
GAACTCAAGTATTTCTTTGA+TGG - Chr7:73634911-73634930 None:intergenic 30.0%
GAAGAATCTTTGAGCTTAAT+AGG - Chr7:73634285-73634304 None:intergenic 30.0%
GATAGAAGCAATGTGAAAAA+CGG - Chr7:73633391-73633410 None:intergenic 30.0%
GTGGTATTAGAAAAATGTTG+AGG - Chr7:73633676-73633695 None:intergenic 30.0%
TCAAAGTATATCTGTCGATA+CGG + Chr7:73632215-73632234 MsG0780040143.01.T01:CDS 30.0%
TCATACTGTGAATTGATGTT+AGG - Chr7:73634947-73634966 None:intergenic 30.0%
TCCTTACTTAATGATGACAT+TGG - Chr7:73635140-73635159 None:intergenic 30.0%
TTAATAATGTGTGATGTGGA+AGG + Chr7:73633944-73633963 MsG0780040143.01.T01:intron 30.0%
TTACAAAGAAAACCTCCAAA+GGG + Chr7:73634207-73634226 MsG0780040143.01.T01:CDS 30.0%
TTAGAAAAATGTTGAGGTGT+TGG - Chr7:73633670-73633689 None:intergenic 30.0%
TTCAAACCTATTAGATGCTA+TGG + Chr7:73634684-73634703 MsG0780040143.01.T01:three_prime_UTR 30.0%
TTCATCAAAGATGCTTCATA+AGG - Chr7:73634976-73634995 None:intergenic 30.0%
TTTACAAAGAAAACCTCCAA+AGG + Chr7:73634206-73634225 MsG0780040143.01.T01:CDS 30.0%
! CCTTAAAAAAAAGGTACGTT+TGG - Chr7:73633080-73633099 None:intergenic 30.0%
! GAGAGAGGATTGAAATTTTT+GGG - Chr7:73633574-73633593 None:intergenic 30.0%
! GGAAGCTACAAAATTTTCTT+TGG + Chr7:73635458-73635477 MsG0780040143.01.T01:three_prime_UTR 30.0%
! TGAGAGAGGATTGAAATTTT+TGG - Chr7:73633575-73633594 None:intergenic 30.0%
! TTTTCAGCTAAAGCTTCATT+TGG + Chr7:73633998-73634017 MsG0780040143.01.T01:intron 30.0%
!! AATTGTTGCTAGTGTTGATT+TGG - Chr7:73634814-73634833 None:intergenic 30.0%
!! ATTGTTGCTAGTGTTGATTT+GGG - Chr7:73634813-73634832 None:intergenic 30.0%
!! CAAAGGGTATTAAGACTAAT+TGG + Chr7:73634223-73634242 MsG0780040143.01.T01:intron 30.0%
!! CAATTAGTCTTAATACCCTT+TGG - Chr7:73634225-73634244 None:intergenic 30.0%
!! GAACATTATTGGTGTCAAAA+AGG + Chr7:73634174-73634193 MsG0780040143.01.T01:CDS 30.0%
!! GTTAATTTGTTTGTGTGTGT+TGG + Chr7:73635351-73635370 MsG0780040143.01.T01:three_prime_UTR 30.0%
!! TAATTTGTTTGTGTGTGTTG+GGG + Chr7:73635353-73635372 MsG0780040143.01.T01:three_prime_UTR 30.0%
!! TGTACACTACTATTTCTGAT+AGG - Chr7:73635327-73635346 None:intergenic 30.0%
!! TTTTCTAGGAATTGAAGGAA+GGG + Chr7:73635216-73635235 MsG0780040143.01.T01:three_prime_UTR 30.0%
!! TTTTTCTAGGAATTGAAGGA+AGG + Chr7:73635215-73635234 MsG0780040143.01.T01:three_prime_UTR 30.0%
!!! AGGATTGAAATTTTTGGGAT+TGG - Chr7:73633569-73633588 None:intergenic 30.0%
!!! CCAAACGTACCTTTTTTTTA+AGG + Chr7:73633077-73633096 MsG0780040143.01.T01:intron 30.0%
!!! GGATTGAAATTTTTGGGATT+GGG - Chr7:73633568-73633587 None:intergenic 30.0%
!!! GTTTTTGGTGATTGGAAAAA+GGG - Chr7:73634616-73634635 None:intergenic 30.0%
!!! TGTTTTTGGTGATTGGAAAA+AGG - Chr7:73634617-73634636 None:intergenic 30.0%
AACTCATTCTTCACTACCTT+AGG + Chr7:73633753-73633772 MsG0780040143.01.T01:intron 35.0%
AGAGAGACAAAAACCAAACT+TGG - Chr7:73633624-73633643 None:intergenic 35.0%
AGTAGTCCATAGCATCTAAT+AGG - Chr7:73634693-73634712 None:intergenic 35.0%
ATACAAACCTGGTAAATCCA+TGG - Chr7:73633843-73633862 None:intergenic 35.0%
ATGAATGACAAACCAATCCA+TGG - Chr7:73633365-73633384 None:intergenic 35.0%
ATGACATTGGTGTAATTTGG+TGG - Chr7:73635127-73635146 None:intergenic 35.0%
ATTGTTTAATGATGCCAGCA+GGG - Chr7:73633246-73633265 None:intergenic 35.0%
CAAAGTATATCTGTCGATAC+GGG + Chr7:73632216-73632235 MsG0780040143.01.T01:CDS 35.0%
CACTTAAGTAAATTGGGATG+AGG - Chr7:73633030-73633049 None:intergenic 35.0%
CAGTATACATCTATGAAGTC+CGG - Chr7:73632824-73632843 None:intergenic 35.0%
GAATCATCAGAAACTATGGT+TGG + Chr7:73634552-73634571 MsG0780040143.01.T01:three_prime_UTR 35.0%
GGAATTATTGTTTGTGCAGT+TGG + Chr7:73634474-73634493 MsG0780040143.01.T01:intron 35.0%
TATTGTTTAATGATGCCAGC+AGG - Chr7:73633247-73633266 None:intergenic 35.0%
TGACATTGGTGTAATTTGGT+GGG - Chr7:73635126-73635145 None:intergenic 35.0%
TGATTGGAAAAAGGGTTTCT+TGG - Chr7:73634608-73634627 None:intergenic 35.0%
TTGATGTCTTTGTTCGATTG+TGG - Chr7:73634379-73634398 None:intergenic 35.0%
TTGGACAAAATCATGGTTCT+TGG + Chr7:73633440-73633459 MsG0780040143.01.T01:intron 35.0%
TTTGGGTACTTTCTATCTCT+AGG - Chr7:73634049-73634068 None:intergenic 35.0%
! AAGAGGTGATGTTGTGTTTT+TGG - Chr7:73634631-73634650 None:intergenic 35.0%
! ACCATGATTTTGTCCAAAAG+TGG - Chr7:73633437-73633456 None:intergenic 35.0%
! ATCTATTTCTCACCATGGAT+TGG + Chr7:73633350-73633369 MsG0780040143.01.T01:intron 35.0%
! CATGATTTTGTCCAAAAGTG+GGG - Chr7:73633435-73633454 None:intergenic 35.0%
! CCATGATTTTGTCCAAAAGT+GGG - Chr7:73633436-73633455 None:intergenic 35.0%
! GAAGTCCGGAAACTTTAAAA+CGG - Chr7:73632810-73632829 None:intergenic 35.0%
! TGGAATTTTTGTCGTCATGT+GGG - Chr7:73633521-73633540 None:intergenic 35.0%
! TTTCTAGGAATTGAAGGAAG+GGG + Chr7:73635217-73635236 MsG0780040143.01.T01:three_prime_UTR 35.0%
!! AGAGATAGAAAGTACCCAAA+TGG + Chr7:73634049-73634068 MsG0780040143.01.T01:CDS 35.0%
!! CTTTTGACTCCATACCAAAT+AGG - Chr7:73635249-73635268 None:intergenic 35.0%
!! GGGTCCATTTTAAAGAAGAT+AGG - Chr7:73633415-73633434 None:intergenic 35.0%
!! TAGCCTTGATATTGATGATG+AGG - Chr7:73635018-73635037 None:intergenic 35.0%
!! TGCTTTAAAGTGTTGGATTG+AGG - Chr7:73634854-73634873 None:intergenic 35.0%
!! TTAGTCTTAATACCCTTTGG+AGG - Chr7:73634222-73634241 None:intergenic 35.0%
!! TTTAAAATGGACCCCACTTT+TGG + Chr7:73633421-73633440 MsG0780040143.01.T01:intron 35.0%
!!! AATTTTTGGGATTGGGAGAA+AGG - Chr7:73633561-73633580 None:intergenic 35.0%
!!! ATGGAGGCATTTTTTTCCTA+AGG - Chr7:73633772-73633791 None:intergenic 35.0%
!!! CGTTTGGAGTTGTTTTAATG+TGG - Chr7:73633064-73633083 None:intergenic 35.0%
!!! GATGTTGTGTTTTTGGTGAT+TGG - Chr7:73634624-73634643 None:intergenic 35.0%
AGAATGAGTTCTGCATCAGT+AGG - Chr7:73633743-73633762 None:intergenic 40.0%
AGATAAGAAGCTGCTCAACA+TGG - Chr7:73634716-73634735 None:intergenic 40.0%
AGCTCAAAGATTCTTCCATG+AGG + Chr7:73634289-73634308 MsG0780040143.01.T01:intron 40.0%
ATGAGGGTGAGTTTAGATTG+CGG + Chr7:73634306-73634325 MsG0780040143.01.T01:intron 40.0%
ATTCCCAAACCATCAGGAAT+TGG + Chr7:73634740-73634759 MsG0780040143.01.T01:three_prime_UTR 40.0%
CCAGCTTTCAAACATAGATG+AGG + Chr7:73634874-73634893 MsG0780040143.01.T01:three_prime_UTR 40.0%
CCTCATCTATGTTTGAAAGC+TGG - Chr7:73634877-73634896 None:intergenic 40.0%
CTGAAAATTCCCAAACCATC+AGG + Chr7:73634734-73634753 MsG0780040143.01.T01:three_prime_UTR 40.0%
CTTCATTTGGCGAGAAAGAA+TGG + Chr7:73634011-73634030 MsG0780040143.01.T01:CDS 40.0%
GAATGAGTTCTGCATCAGTA+GGG - Chr7:73633742-73633761 None:intergenic 40.0%
GATGTTAGGGAAATTGCAAG+AGG - Chr7:73634933-73634952 None:intergenic 40.0%
GCTCAAAGATTCTTCCATGA+GGG + Chr7:73634290-73634309 MsG0780040143.01.T01:intron 40.0%
GGTCCTCATCATCAATATCA+AGG + Chr7:73635012-73635031 MsG0780040143.01.T01:three_prime_UTR 40.0%
GTTCCAATTCCTGATGGTTT+GGG - Chr7:73634746-73634765 None:intergenic 40.0%
GTTTGTGCAGTTGGATGATT+GGG + Chr7:73634483-73634502 MsG0780040143.01.T01:intron 40.0%
TCAGGAATTGGAACAAGTTC+AGG + Chr7:73634752-73634771 MsG0780040143.01.T01:three_prime_UTR 40.0%
TGTATGCTTCACACCAAGTT+TGG + Chr7:73633608-73633627 MsG0780040143.01.T01:intron 40.0%
TGTGTTGGAATGCGAGAAAA+AGG + Chr7:73633136-73633155 MsG0780040143.01.T01:intron 40.0%
TGTTCCAATTCCTGATGGTT+TGG - Chr7:73634747-73634766 None:intergenic 40.0%
TGTTTGTGCAGTTGGATGAT+TGG + Chr7:73634482-73634501 MsG0780040143.01.T01:intron 40.0%
TTGATGTAGTTGTTCGACTG+TGG + Chr7:73634410-73634429 MsG0780040143.01.T01:intron 40.0%
! AACTTCAGCAATGATGGAAC+AGG - Chr7:73633802-73633821 None:intergenic 40.0%
! AGGAAGGGATTTTATGGTTG+TGG - Chr7:73633541-73633560 None:intergenic 40.0%
! GAACTTGTTCCAATTCCTGA+TGG - Chr7:73634752-73634771 None:intergenic 40.0%
! GGAGAAAGGAAGGGATTTTA+TGG - Chr7:73633547-73633566 None:intergenic 40.0%
! GTGGAATTTTTGTCGTCATG+TGG - Chr7:73633522-73633541 None:intergenic 40.0%
!! AAGCTGGTGCTTTAAAGTGT+TGG - Chr7:73634861-73634880 None:intergenic 40.0%
!! AGAAACTATGGTTGGTGAAG+TGG + Chr7:73634560-73634579 MsG0780040143.01.T01:three_prime_UTR 40.0%
!! CCCACTTTTGGACAAAATCA+TGG + Chr7:73633433-73633452 MsG0780040143.01.T01:intron 40.0%
!!! CGTCTCCGTTTTAAAGTTTC+CGG + Chr7:73632802-73632821 MsG0780040143.01.T01:intron 40.0%
!!! GGACACTGATTTTTGAGACA+TGG - Chr7:73634662-73634681 None:intergenic 40.0%
AAACGGAGACGTATCCGTAT+CGG - Chr7:73632793-73632812 None:intergenic 45.0%
AAATGGTGCAAGGCCAAACA+GGG + Chr7:73634066-73634085 MsG0780040143.01.T01:CDS 45.0%
ACATGGCAATGATGCCACTA+TGG - Chr7:73634134-73634153 None:intergenic 45.0%
ACCAATTTGCCACCAGGTTT+AGG + Chr7:73633711-73633730 MsG0780040143.01.T01:intron 45.0%
ACCTAAACCTGGTGGCAAAT+TGG - Chr7:73633715-73633734 None:intergenic 45.0%
AGGAATTGAAGGAAGGGGTT+AGG + Chr7:73635222-73635241 MsG0780040143.01.T01:three_prime_UTR 45.0%
ATAGTGGCATCATTGCCATG+TGG + Chr7:73634133-73634152 MsG0780040143.01.T01:CDS 45.0%
CACGATGTGATACGTGTAAG+TGG + Chr7:73632244-73632263 MsG0780040143.01.T01:intron 45.0%
GAGACATGGTGTGTTTGAAG+AGG - Chr7:73634648-73634667 None:intergenic 45.0%
GCAATCTAAACTCACCCTCA+TGG - Chr7:73634307-73634326 None:intergenic 45.0%
GGGTTAGGACCTATTTGGTA+TGG + Chr7:73635237-73635256 MsG0780040143.01.T01:three_prime_UTR 45.0%
GTTCGATTGTGGCAAGACTA+TGG - Chr7:73634368-73634387 None:intergenic 45.0%
GTTGGATCCATGGATTTACC+AGG + Chr7:73633833-73633852 MsG0780040143.01.T01:intron 45.0%
TATATCTGTCGATACGGGTG+CGG + Chr7:73632221-73632240 MsG0780040143.01.T01:CDS 45.0%
TATCGGACACCGATACTTCA+CGG - Chr7:73632776-73632795 None:intergenic 45.0%
TCGTCATGTGGGAAGAGATT+AGG - Chr7:73633510-73633529 None:intergenic 45.0%
TGCGAGTATCCGTGAAGTAT+CGG + Chr7:73632764-73632783 MsG0780040143.01.T01:intron 45.0%
TGGAATGCGAGAAAAAGGTG+TGG + Chr7:73633141-73633160 MsG0780040143.01.T01:intron 45.0%
TTGGGATTGGGAGAAAGGAA+GGG - Chr7:73633556-73633575 None:intergenic 45.0%
TTGTTTGTGTGTGTTGGGGT+TGG + Chr7:73635357-73635376 MsG0780040143.01.T01:three_prime_UTR 45.0%
! AGCAATGATGGAACAGGCAA+GGG - Chr7:73633796-73633815 None:intergenic 45.0%
! TTTGGGATTGGGAGAAAGGA+AGG - Chr7:73633557-73633576 None:intergenic 45.0%
!! GAAAGTACCCAAATGGTGCA+AGG + Chr7:73634056-73634075 MsG0780040143.01.T01:CDS 45.0%
!! TATGGTCTTATCAGTGCCAG+TGG - Chr7:73634116-73634135 None:intergenic 45.0%
!! TGAAGTATCGGTGTCCGATA+CGG + Chr7:73632776-73632795 MsG0780040143.01.T01:intron 45.0%
!! TGGCACTGATAAGACCATAG+TGG + Chr7:73634117-73634136 MsG0780040143.01.T01:CDS 45.0%
!! TGTTTGGCCTTGCACCATTT+GGG - Chr7:73634066-73634085 None:intergenic 45.0%
!! TTCTATAAATTTAAATTTAA+AGG + Chr7:73633862-73633881 MsG0780040143.01.T01:intron 5.0%
AGTAGGGTGGAACCTAAACC+TGG - Chr7:73633726-73633745 None:intergenic 50.0%
ATGTGGGAAGAGATTAGGCC+AGG - Chr7:73633505-73633524 None:intergenic 50.0%
CAAATGGTGCAAGGCCAAAC+AGG + Chr7:73634065-73634084 MsG0780040143.01.T01:CDS 50.0%
GGAAGGGGTTAGGACCTATT+TGG + Chr7:73635232-73635251 MsG0780040143.01.T01:three_prime_UTR 50.0%
TGAGTTCTGCATCAGTAGGG+TGG - Chr7:73633739-73633758 None:intergenic 50.0%
TGATGGAACAGGCAAGGGAA+TGG - Chr7:73633791-73633810 None:intergenic 50.0%
TGTGATCTTCCTCCTCCACA+TGG - Chr7:73634151-73634170 None:intergenic 50.0%
TGTGGGAAGAGATTAGGCCA+GGG - Chr7:73633504-73633523 None:intergenic 50.0%
TTAATGATGCCAGCAGGGCA+CGG - Chr7:73633241-73633260 None:intergenic 50.0%
! CAGCAATGATGGAACAGGCA+AGG - Chr7:73633797-73633816 None:intergenic 50.0%
! CTGGTGGCAAATTGGTCTGT+GGG - Chr7:73633707-73633726 None:intergenic 50.0%
! TGGTGGCAAATTGGTCTGTG+GGG - Chr7:73633706-73633725 None:intergenic 50.0%
!! CTGTTTGGCCTTGCACCATT+TGG - Chr7:73634067-73634086 None:intergenic 50.0%
!! TCAGGGTATTGGAAAGCCAC+TGG + Chr7:73634097-73634116 MsG0780040143.01.T01:CDS 50.0%
AGGGTGGAACCTAAACCTGG+TGG - Chr7:73633723-73633742 None:intergenic 55.0%
CAAACAGGGCAGCTGCTTCA+GGG + Chr7:73634080-73634099 MsG0780040143.01.T01:CDS 55.0%
CCACAGACCAATTTGCCACC+AGG + Chr7:73633705-73633724 MsG0780040143.01.T01:intron 55.0%
GCATCATTGCCATGTGGAGG+AGG + Chr7:73634139-73634158 MsG0780040143.01.T01:CDS 55.0%
GGATAATTACCGTGCCCTGC+TGG + Chr7:73633229-73633248 MsG0780040143.01.T01:intron 55.0%
GTGGCATCATTGCCATGTGG+AGG + Chr7:73634136-73634155 MsG0780040143.01.T01:CDS 55.0%
GTGGGAAGAGATTAGGCCAG+GGG - Chr7:73633503-73633522 None:intergenic 55.0%
TGGAACAGGCAAGGGAATGG+AGG - Chr7:73633788-73633807 None:intergenic 55.0%
TGGGAAGAGATTAGGCCAGG+GGG - Chr7:73633502-73633521 None:intergenic 55.0%
! CCTGGTGGCAAATTGGTCTG+TGG - Chr7:73633708-73633727 None:intergenic 55.0%
AGAGATTAGGCCAGGGGGCT+AGG - Chr7:73633497-73633516 None:intergenic 60.0%
AGATTAGGCCAGGGGGCTAG+GGG - Chr7:73633495-73633514 None:intergenic 60.0%
ATTCATACCCCCTAGCCCCC+TGG + Chr7:73633484-73633503 MsG0780040143.01.T01:intron 60.0%
CCAAACAGGGCAGCTGCTTC+AGG + Chr7:73634079-73634098 MsG0780040143.01.T01:CDS 60.0%
CCTGAAGCAGCTGCCCTGTT+TGG - Chr7:73634082-73634101 None:intergenic 60.0%
GAGATTAGGCCAGGGGGCTA+GGG - Chr7:73633496-73633515 None:intergenic 60.0%
GGGCAGCTGCTTCAGGGTAT+TGG + Chr7:73634086-73634105 MsG0780040143.01.T01:CDS 60.0%
TGGTCTGTGGGGTTCCCATG+TGG - Chr7:73633695-73633714 None:intergenic 60.0%
GATTAGGCCAGGGGGCTAGG+GGG - Chr7:73633494-73633513 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 73632168 73635482 73632168 ID=MsG0780040143.01;Name=MsG0780040143.01
Chr7 mRNA 73632168 73635482 73632168 ID=MsG0780040143.01.T01;Parent=MsG0780040143.01;Name=MsG0780040143.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0|0.33|0.66|0.5|0.66|3|939|121
Chr7 exon 73632168 73632258 73632168 ID=MsG0780040143.01.T01:exon:10091;Parent=MsG0780040143.01.T01
Chr7 exon 73634005 73634228 73634005 ID=MsG0780040143.01.T01:exon:10092;Parent=MsG0780040143.01.T01
Chr7 exon 73634493 73635482 73634493 ID=MsG0780040143.01.T01:exon:10093;Parent=MsG0780040143.01.T01
Chr7 CDS 73632168 73632258 73632168 ID=MsG0780040143.01.T01:cds;Parent=MsG0780040143.01.T01
Chr7 CDS 73634005 73634228 73634005 ID=MsG0780040143.01.T01:cds;Parent=MsG0780040143.01.T01
Chr7 CDS 73634493 73634543 73634493 ID=MsG0780040143.01.T01:cds;Parent=MsG0780040143.01.T01
Chr7 three_prime_UTR 73634544 73635482 73634544 ID=MsG0780040143.01.T01:three_prime_utr;Parent=MsG0780040143.01.T01
Gene Sequence

>MsG0780040143.01.T01

ATGGATGTTGAAAATCATATCTCTAAATTATATCCATGGATAGTTAGTCAAAGTATATCTGTCGATACGGGTGCGGCACGATGTGATACGTCTAAAGCTTCATTTGGCGAGAAAGAATGGTACTTTTTTAGTCCTAGAGATAGAAAGTACCCAAATGGTGCAAGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAAGCCACTGGCACTGATAAGACCATAGTGGCATCATTGCCATGTGGAGGAGGAAGATCACAAGAGAACATTATTGGTGTCAAAAAGGCTCTTGTTTTTTACAAAGAAAACCTCCAAAGGTTGGATGATTGGGTGCTATGCCGAATTTACAAGAAATCAAATGTGCACTAA

Protein sequence

>MsG0780040143.01.T01

MDVENHISKLYPWIVSQSISVDTGAARCDTSKASFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVASLPCGGGRSQENIIGVKKALVFYKENLQRLDDWVLCRIYKKSNVH*