AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036139.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036139.01.T01 MTR_5g064850 84.901 404 29 3 1 379 1 397 0.0 636
MsG0780036139.01.T01 MTR_5g064850 84.653 404 28 4 1 379 1 395 0.0 628
MsG0780036139.01.T01 MTR_7g007890 83.168 404 36 2 1 379 1 397 0.0 622
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036139.01.T01 AT5G61330 55.801 362 124 4 46 378 82 436 6.37e-124 365
MsG0780036139.01.T01 AT5G61330 55.801 362 124 4 46 378 82 436 6.37e-124 365
MsG0780036139.01.T01 AT5G61330 56.461 356 119 4 46 372 93 441 1.12e-123 364

Find 93 sgRNAs with CRISPR-Local

Find 524 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCAGTATGGCAACTTTC+AGG 0.156523 7:+3337485 MsG0780036139.01.T01:intron
TTTAGAAGTTTCTAACAATT+TGG 0.183126 7:+3337058 MsG0780036139.01.T01:CDS
TGAAAAGATAGTAAACTTTA+TGG 0.190174 7:+3339686 MsG0780036139.01.T01:CDS
AAATAGATTTACAGCAAAAT+TGG 0.217307 7:-3339915 None:intergenic
ACCGGTGCTGCTGCAATTAA+AGG 0.225926 7:+3337550 MsG0780036139.01.T01:CDS
GGAAACTTTGGATTCTATAT+TGG 0.245063 7:+3334332 MsG0780036139.01.T01:CDS
AATCTTACAGCTCCTGTTCT+TGG 0.276984 7:-3331948 None:intergenic
ATGAATTGCTACCTCGTTAT+AGG 0.297845 7:-3331688 None:intergenic
CATGAAGAACTCACCATTAC+TGG 0.321407 7:-3334973 None:intergenic
AACTTCTTCCAAGGAAACTT+TGG 0.350436 7:+3334320 MsG0780036139.01.T01:CDS
CTCGATAATCAACATCATAT+TGG 0.363965 7:-3339869 None:intergenic
TCAGAATCGTCCAGAAGTTC+AGG 0.374459 7:-3338124 None:intergenic
ATGCTATTTGATGATCTGTT+TGG 0.374783 7:+3339744 MsG0780036139.01.T01:CDS
TGACGGTGATCCTGAACTTC+TGG 0.375086 7:+3338114 MsG0780036139.01.T01:CDS
TCATATAAGCGGCAACTTGA+TGG 0.385020 7:-3337683 None:intergenic
CATCTGCTTAATCATTCTAC+TGG 0.390388 7:-3337712 None:intergenic
TATAGAATCCAAAGTTTCCT+TGG 0.395053 7:-3334328 None:intergenic
AGATCAGCTATTAAAATATT+CGG 0.396218 7:+3337744 MsG0780036139.01.T01:CDS
AAGAAAATTATACTGCTTCA+AGG 0.401134 7:-3331538 None:intergenic
GAGGAGGAAGAGGAGGAAGA+TGG 0.401220 7:+3331817 MsG0780036139.01.T01:CDS
GGAGGAAGATGGAGAGGATG+AGG 0.413025 7:+3331828 MsG0780036139.01.T01:CDS
ACAACTTGAGAAAGAGTATA+GGG 0.419407 7:+3331915 MsG0780036139.01.T01:CDS
GAAGAACTTGAAGCATCATA+AGG 0.425208 7:+3333769 MsG0780036139.01.T01:CDS
TTTAGCCTTAGCCCTTTGAT+TGG 0.426278 7:+3340073 MsG0780036139.01.T01:three_prime_UTR
TAGCGAGTTGGAGGAGGAGG+AGG 0.430492 7:+3331801 MsG0780036139.01.T01:CDS
GAATCAGACGAGACAGTTAG+AGG 0.432355 7:+3334279 MsG0780036139.01.T01:CDS
TTGCAGTATGGCAACTTTCA+GGG 0.436730 7:+3337486 MsG0780036139.01.T01:intron
TGATAGCGAGTTGGAGGAGG+AGG 0.443094 7:+3331798 MsG0780036139.01.T01:CDS
TTAGCCTTAGCCCTTTGATT+GGG 0.445334 7:+3340074 MsG0780036139.01.T01:three_prime_UTR
AAGCATAGAAATATCTCTGC+AGG 0.445774 7:-3340043 None:intergenic
GTGATGAGGAAGAAGAAGAT+GGG 0.447777 7:+3331854 MsG0780036139.01.T01:CDS
GCCATGGGAGGAAGATTTGC+CGG 0.449865 7:-3339717 None:intergenic
TCCTTTAATTGCAGCAGCAC+CGG 0.452449 7:-3337551 None:intergenic
TGGATGGAAAGATGATGAAA+TGG 0.453888 7:+3331891 MsG0780036139.01.T01:CDS
ACAATTGATCCTTCATCATC+AGG 0.454754 7:+3338181 MsG0780036139.01.T01:CDS
AGTGATGAGGAAGAAGAAGA+TGG 0.456913 7:+3331853 MsG0780036139.01.T01:CDS
AGATTTCTCGGATGCACAAC+AGG 0.459754 7:+3337108 MsG0780036139.01.T01:CDS
AAGAGTGGTCACAGATTTCT+CGG 0.468215 7:+3337096 MsG0780036139.01.T01:CDS
ATCAAATAGCATTGGCGCCA+TGG 0.471359 7:-3339733 None:intergenic
TGATGATAGCGAGTTGGAGG+AGG 0.473123 7:+3331795 MsG0780036139.01.T01:CDS
TAATGATAGCTCTAATGAAC+CGG 0.480771 7:+3337872 MsG0780036139.01.T01:CDS
CACAGCCAACCGTGATTATG+AGG 0.481456 7:-3339796 None:intergenic
AAACTTTATGGCTCCTCGAC+CGG 0.496516 7:+3339698 MsG0780036139.01.T01:CDS
GTGGCTGCAACGGAAGGGAG+AGG 0.496704 7:-3331475 None:intergenic
GGATCTTCATCACCAAGAAC+AGG 0.499445 7:+3331936 MsG0780036139.01.T01:CDS
ACTTCCCAATCAAAGGGCTA+AGG 0.500612 7:-3340078 None:intergenic
AGGATGAAGATCTCCTGAAA+GGG 0.503386 7:+3333789 MsG0780036139.01.T01:CDS
GAGGAAGATGGAGAGGATGA+GGG 0.507143 7:+3331829 MsG0780036139.01.T01:CDS
AATTGTTTACCTGATGATGA+AGG 0.510261 7:-3338190 None:intergenic
AAATGATGATAGCGAGTTGG+AGG 0.512371 7:+3331792 MsG0780036139.01.T01:CDS
TTAACAAAGATCAAATTATG+TGG 0.514827 7:-3340150 None:intergenic
AACAACTTGAGAAAGAGTAT+AGG 0.516904 7:+3331914 MsG0780036139.01.T01:CDS
AGGATGACACAAGTGACAAC+CGG 0.520387 7:+3337532 MsG0780036139.01.T01:CDS
ACGGAGAGGCGTGGCTGCAA+CGG 0.521704 7:-3331485 None:intergenic
GGGGACAAGAGGAAAGTGGA+TGG 0.521729 7:+3331875 MsG0780036139.01.T01:CDS
ACCGGCAAATCTTCCTCCCA+TGG 0.522237 7:+3339716 MsG0780036139.01.T01:CDS
GGGACAAGTCAATCAACAAA+TGG 0.528981 7:+3337506 MsG0780036139.01.T01:CDS
TGATGAGGAAGAAGAAGATG+GGG 0.531444 7:+3331855 MsG0780036139.01.T01:CDS
GGAAGAGGAGGAAGATGGAG+AGG 0.534241 7:+3331822 MsG0780036139.01.T01:CDS
GATAATCAACATCATATTGG+AGG 0.534326 7:-3339866 None:intergenic
TCAAATAGCATTGGCGCCAT+GGG 0.534558 7:-3339732 None:intergenic
GGAGGAAGATTTGCCGGTCG+AGG 0.535642 7:-3339711 None:intergenic
TTCTATATTGGAACTTCAAG+AGG 0.536268 7:+3334344 MsG0780036139.01.T01:CDS
AGAGGCGTGGCTGCAACGGA+AGG 0.539246 7:-3331481 None:intergenic
TGGCTGCAACGGAAGGGAGA+GGG 0.541437 7:-3331474 None:intergenic
AACAGATCATCAAATAGCAT+TGG 0.546718 7:-3339741 None:intergenic
GGTAAATGATGATAGCGAGT+TGG 0.548944 7:+3331789 MsG0780036139.01.T01:intron
AGAGGATGAGGGAAGTGATG+AGG 0.561924 7:+3331840 MsG0780036139.01.T01:CDS
TTACTGGCTTGAGCAACTGA+TGG 0.562545 7:-3334957 None:intergenic
AGATTTGATAACTTCTTCCA+AGG 0.568073 7:+3334311 MsG0780036139.01.T01:CDS
ATCTGCTTAATCATTCTACT+GGG 0.569582 7:-3337711 None:intergenic
TGCAGCCTCATAATCACGGT+TGG 0.570923 7:+3339791 MsG0780036139.01.T01:exon
AAGGATGAAGATCTCCTGAA+AGG 0.581931 7:+3333788 MsG0780036139.01.T01:CDS
TCAGTTGCTCAAGCCAGTAA+TGG 0.587160 7:+3334960 MsG0780036139.01.T01:CDS
AACATTAAGAAAGATCCTCC+AGG 0.596190 7:-3340016 None:intergenic
AATAGCATTGGCGCCATGGG+AGG 0.603352 7:-3339729 None:intergenic
CAATATGATGTTGATTATCG+AGG 0.605962 7:+3339870 MsG0780036139.01.T01:three_prime_UTR
GAGGCGTGGCTGCAACGGAA+GGG 0.606086 7:-3331480 None:intergenic
ATTAGAGCTATCATTAACCT+CGG 0.615774 7:-3337865 None:intergenic
AGCATAGAAATATCTCTGCA+GGG 0.617136 7:-3340042 None:intergenic
CTTATGTCTCCAGGTTGCCG+AGG 0.618246 7:+3337848 MsG0780036139.01.T01:intron
CTGCTGCAGCCTCATAATCA+CGG 0.618627 7:+3339787 MsG0780036139.01.T01:exon
GATGAGGAAGAAGAAGATGG+GGG 0.621289 7:+3331856 MsG0780036139.01.T01:CDS
CTAATGCTCTAAGAACAACC+TGG 0.633764 7:+3339998 MsG0780036139.01.T01:three_prime_UTR
AGTCAATCAACAAATGGCAG+AGG 0.633983 7:+3337512 MsG0780036139.01.T01:CDS
ATGACAATCTTGATCAAGAG+TGG 0.634506 7:+3337081 MsG0780036139.01.T01:CDS
CTTATCAAAACGGAGAGGCG+TGG 0.639344 7:-3331494 None:intergenic
ACTGGGATCTCTCATATAAG+CGG 0.648370 7:-3337694 None:intergenic
GCAAGCTGTGAAAAGCCAGA+AGG 0.680270 7:+3333811 MsG0780036139.01.T01:CDS
GCTCAGGAGACACATGCTGA+CGG 0.721593 7:+3338097 MsG0780036139.01.T01:intron
AAGCGCTTATCAAAACGGAG+AGG 0.726135 7:-3331499 None:intergenic
TGATGATATGTCCTATAACG+AGG 0.728032 7:+3331677 MsG0780036139.01.T01:CDS
ATGCTCTAAGAACAACCTGG+AGG 0.740057 7:+3340001 MsG0780036139.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACTTAATATTACAATAT+AGG + Chr7:3337935-3337954 MsG0780036139.01.T01:intron 10.0%
!! ATATAAATAAGAAAAATACT+TGG + Chr7:3338523-3338542 MsG0780036139.01.T01:intron 10.0%
!! CAAAAAAAAAAAATCTTATA+AGG - Chr7:3334700-3334719 None:intergenic 10.0%
!! CTAAAAATATATACAAATAA+AGG - Chr7:3338940-3338959 None:intergenic 10.0%
!!! AAAAAAAAAAAAGTATAACA+AGG - Chr7:3338031-3338050 None:intergenic 10.0%
!!! AAAAAAAAAAAGTATAACAA+GGG - Chr7:3338030-3338049 None:intergenic 10.0%
!!! ATAAACTATATTTTAACATT+TGG + Chr7:3339279-3339298 MsG0780036139.01.T01:intron 10.0%
!!! TACCATTTTTTTTTAAATTA+TGG - Chr7:3337253-3337272 None:intergenic 10.0%
!! AAAAGAAAGTTAATTAACTT+AGG - Chr7:3336797-3336816 None:intergenic 15.0%
!! ATCACTTAATAATAAATTAG+AGG - Chr7:3334859-3334878 None:intergenic 15.0%
!! ATTATAACAGCTATATAAAA+GGG - Chr7:3335151-3335170 None:intergenic 15.0%
!! CACCATAATTTAAAAAAAAA+TGG + Chr7:3337248-3337267 MsG0780036139.01.T01:intron 15.0%
!! CATTAAAAGAAACAAAAATT+TGG - Chr7:3337013-3337032 None:intergenic 15.0%
!! CCAAAATTTAAATAAAAGAA+TGG + Chr7:3334378-3334397 MsG0780036139.01.T01:intron 15.0%
!! TAAAACATTTCATAAGATTT+AGG + Chr7:3336535-3336554 MsG0780036139.01.T01:intron 15.0%
!! TATCATATTTATCATTTCAA+AGG - Chr7:3334467-3334486 None:intergenic 15.0%
!! TATTATAACAGCTATATAAA+AGG - Chr7:3335152-3335171 None:intergenic 15.0%
!! TCATAAAAAAAATTGAGTTT+AGG + Chr7:3331567-3331586 MsG0780036139.01.T01:five_prime_UTR 15.0%
!!! AAAAAAAAAAGTATAACAAG+GGG - Chr7:3338029-3338048 None:intergenic 15.0%
!!! AAAATTATGATTTTTTTGTC+AGG + Chr7:3335406-3335425 MsG0780036139.01.T01:intron 15.0%
!!! AAATTATGATTTTTTTGTCA+GGG + Chr7:3335407-3335426 MsG0780036139.01.T01:intron 15.0%
!!! AACTCAATTTTTTTTATGAA+TGG - Chr7:3331566-3331585 None:intergenic 15.0%
!!! ATCAACAATTTTTCTTTTTT+TGG - Chr7:3339528-3339547 None:intergenic 15.0%
!!! ATTAAAACAAAGGAAATTTT+TGG - Chr7:3336905-3336924 None:intergenic 15.0%
!!! ATTTTTGTTTCTTTTAATGA+AGG + Chr7:3337014-3337033 MsG0780036139.01.T01:intron 15.0%
!!! CCATTCTTTTATTTAAATTT+TGG - Chr7:3334381-3334400 None:intergenic 15.0%
!!! TAATTTTAAAGATATGACAA+TGG + Chr7:3339221-3339240 MsG0780036139.01.T01:intron 15.0%
!!! TAGAAAAATATATTTTTCAC+TGG + Chr7:3338964-3338983 MsG0780036139.01.T01:intron 15.0%
!!! TGATTTTCTCAAATTATTAA+CGG + Chr7:3332311-3332330 MsG0780036139.01.T01:intron 15.0%
!!! TGGTTTTAAAAAAAAAACAA+GGG + Chr7:3336175-3336194 MsG0780036139.01.T01:intron 15.0%
!!! TTGGTTTTAAAAAAAAAACA+AGG + Chr7:3336174-3336193 MsG0780036139.01.T01:intron 15.0%
!!! TTGTTTTTTTTTTAAAACCA+AGG - Chr7:3336175-3336194 None:intergenic 15.0%
!!! TTTGAATTTTGATATTATGT+TGG + Chr7:3336450-3336469 MsG0780036139.01.T01:intron 15.0%
!! AAACAAAAATTTGGTTACTT+TGG - Chr7:3337004-3337023 None:intergenic 20.0%
!! AAATAGATTTACAGCAAAAT+TGG - Chr7:3339918-3339937 None:intergenic 20.0%
!! AACTTGACCAAATAAAAAAT+TGG - Chr7:3338269-3338288 None:intergenic 20.0%
!! AATGATTGTAAAGAAGTAAA+TGG - Chr7:3335479-3335498 None:intergenic 20.0%
!! AGATCAGCTATTAAAATATT+CGG + Chr7:3337744-3337763 MsG0780036139.01.T01:CDS 20.0%
!! ATAATTTCAACATAAAGTTG+TGG + Chr7:3338313-3338332 MsG0780036139.01.T01:intron 20.0%
!! ATAGAGATATGTTATATGAT+AGG + Chr7:3332533-3332552 MsG0780036139.01.T01:intron 20.0%
!! ATGCAAAATATATATGACAA+TGG - Chr7:3339614-3339633 None:intergenic 20.0%
!! ATTAGAACAATAACATCTAT+AGG - Chr7:3335966-3335985 None:intergenic 20.0%
!! CAACGAAATAACAAAAAAAA+TGG - Chr7:3331722-3331741 None:intergenic 20.0%
!! CCTCTATAAATAAAATGTAT+TGG + Chr7:3338700-3338719 MsG0780036139.01.T01:intron 20.0%
!! CTCATAAAAATCTTCAAAAT+GGG - Chr7:3335226-3335245 None:intergenic 20.0%
!! CTGCTAATAATTTAAGAAAA+TGG - Chr7:3333013-3333032 None:intergenic 20.0%
!! CTTAGAGTTTATTAAAACAA+AGG - Chr7:3336915-3336934 None:intergenic 20.0%
!! CTTTACAATCATTATAGAAA+GGG + Chr7:3335486-3335505 MsG0780036139.01.T01:intron 20.0%
!! GGTATTATTATAAACTCAAA+AGG - Chr7:3334048-3334067 None:intergenic 20.0%
!! TAAATTTCAGACAATAAGAA+AGG + Chr7:3338344-3338363 MsG0780036139.01.T01:intron 20.0%
!! TAATTTCAACATAAAGTTGT+GGG + Chr7:3338314-3338333 MsG0780036139.01.T01:intron 20.0%
!! TCTCATAAAAATCTTCAAAA+TGG - Chr7:3335227-3335246 None:intergenic 20.0%
!! TCTTTACAATCATTATAGAA+AGG + Chr7:3335485-3335504 MsG0780036139.01.T01:intron 20.0%
!! TGAAAAGATAGTAAACTTTA+TGG + Chr7:3339686-3339705 MsG0780036139.01.T01:CDS 20.0%
!! TGTTATATGATAGGTAATTA+TGG + Chr7:3332542-3332561 MsG0780036139.01.T01:intron 20.0%
!! TTAACAAAGATCAAATTATG+TGG - Chr7:3340153-3340172 None:intergenic 20.0%
!! TTATAACAGCTATATAAAAG+GGG - Chr7:3335150-3335169 None:intergenic 20.0%
!! TTCAGTGTAATTATTTGTAT+CGG - Chr7:3332286-3332305 None:intergenic 20.0%
!! TTCATGAACATGAAAAATAA+AGG - Chr7:3338474-3338493 None:intergenic 20.0%
!! TTTAAGAAAATGGAATTGAT+TGG - Chr7:3333003-3333022 None:intergenic 20.0%
!! TTTACAATCATTATAGAAAG+GGG + Chr7:3335487-3335506 MsG0780036139.01.T01:intron 20.0%
!! TTTACTTAAATACTCTACAT+AGG + Chr7:3333323-3333342 MsG0780036139.01.T01:intron 20.0%
!! TTTAGAAGTTTCTAACAATT+TGG + Chr7:3337058-3337077 MsG0780036139.01.T01:CDS 20.0%
!! TTTATATGTATCAGTATACA+TGG - Chr7:3338510-3338529 None:intergenic 20.0%
!!! AAAATTACATGCTTTTAATC+AGG + Chr7:3337573-3337592 MsG0780036139.01.T01:CDS 20.0%
!!! AAACATTTTGTCTAATCTTA+AGG - Chr7:3339973-3339992 None:intergenic 20.0%
!!! AATTATCAGTTCTTTTCTTT+AGG + Chr7:3336398-3336417 MsG0780036139.01.T01:intron 20.0%
!!! AATTATGCTATTGCATATTT+TGG + Chr7:3333198-3333217 MsG0780036139.01.T01:intron 20.0%
!!! AATTTTGCTGTAAATCTATT+TGG + Chr7:3339917-3339936 MsG0780036139.01.T01:three_prime_UTR 20.0%
!!! ACTTCCATTTTCATAAATTA+CGG - Chr7:3332685-3332704 None:intergenic 20.0%
!!! AGTTTAGGTTTTACAAAAAT+GGG + Chr7:3331582-3331601 MsG0780036139.01.T01:exon 20.0%
!!! CCAATACATTTTATTTATAG+AGG - Chr7:3338703-3338722 None:intergenic 20.0%
!!! CTTATTGTCTGAAATTTATT+TGG - Chr7:3338342-3338361 None:intergenic 20.0%
!!! TAAAGTTTACTATCTTTTCA+TGG - Chr7:3339686-3339705 None:intergenic 20.0%
!!! TCAACAACCAATTTTTTATT+TGG + Chr7:3338259-3338278 MsG0780036139.01.T01:intron 20.0%
!!! TCCTTCTTTTTATTATCTTT+TGG + Chr7:3335811-3335830 MsG0780036139.01.T01:intron 20.0%
!!! TCTTTCTTAATAGTTTTTCT+AGG - Chr7:3332489-3332508 None:intergenic 20.0%
!!! TTAAGTTTTACTTGTTTTAC+TGG + Chr7:3333252-3333271 MsG0780036139.01.T01:intron 20.0%
!!! TTGAATTTTGATTTTTGTGA+TGG + Chr7:3331762-3331781 MsG0780036139.01.T01:intron 20.0%
!!! TTTCGTAATGTTTTGAATTT+TGG + Chr7:3336485-3336504 MsG0780036139.01.T01:intron 20.0%
!!! TTTGAATGAATTGTTATTGA+AGG + Chr7:3339652-3339671 MsG0780036139.01.T01:intron 20.0%
!!! TTTTTTTTTTTTTGTGTTCC+AGG + Chr7:3334917-3334936 MsG0780036139.01.T01:intron 20.0%
! AAACATAAAAGACAGAGATT+GGG - Chr7:3335007-3335026 None:intergenic 25.0%
! AAAGGAAAAAACAAAATCCT+AGG - Chr7:3338922-3338941 None:intergenic 25.0%
! AACATTTCATAAGATTTAGG+TGG + Chr7:3336538-3336557 MsG0780036139.01.T01:intron 25.0%
! AACATTTCGTCAAAAAACAA+AGG - Chr7:3338801-3338820 None:intergenic 25.0%
! AAGAAAATTATACTGCTTCA+AGG - Chr7:3331541-3331560 None:intergenic 25.0%
! AATTTCAACATAAAGTTGTG+GGG + Chr7:3338315-3338334 MsG0780036139.01.T01:intron 25.0%
! ACAGACTTTAGTAATGTATA+AGG - Chr7:3337902-3337921 None:intergenic 25.0%
! AGATATGACAATGGTAAAAT+AGG + Chr7:3339230-3339249 MsG0780036139.01.T01:intron 25.0%
! ATGAATACCTATCACAAAAT+AGG - Chr7:3337157-3337176 None:intergenic 25.0%
! ATGGAAAATAATCTACCAAA+TGG - Chr7:3335518-3335537 None:intergenic 25.0%
! ATGTAATAGTTCATTCAACT+TGG - Chr7:3334628-3334647 None:intergenic 25.0%
! ATTAAAGTCAAAGTCAAAAC+TGG - Chr7:3338768-3338787 None:intergenic 25.0%
! ATTATTGTGGAATGATACAT+TGG + Chr7:3333553-3333572 MsG0780036139.01.T01:intron 25.0%
! ATTCATATGTTAGTTGTATG+GGG + Chr7:3335716-3335735 MsG0780036139.01.T01:intron 25.0%
! CATTAGAACATCATTATATC+CGG - Chr7:3336860-3336879 None:intergenic 25.0%
! GATAATGTTAGAATGATTGT+TGG + Chr7:3338378-3338397 MsG0780036139.01.T01:intron 25.0%
! GATTCATATGTTAGTTGTAT+GGG + Chr7:3335715-3335734 MsG0780036139.01.T01:intron 25.0%
! GCCAAAAGATAATAAAAAGA+AGG - Chr7:3335815-3335834 None:intergenic 25.0%
! GTAACTGACAATAATGTTAT+GGG - Chr7:3339399-3339418 None:intergenic 25.0%
! TAACTGACAATAATGTTATG+GGG - Chr7:3339398-3339417 None:intergenic 25.0%
! TATAAACTCAAAAGGATCTA+TGG - Chr7:3334040-3334059 None:intergenic 25.0%
! TATAACAGCTATATAAAAGG+GGG - Chr7:3335149-3335168 None:intergenic 25.0%
! TATAATACCTGATTACACTA+AGG + Chr7:3338821-3338840 MsG0780036139.01.T01:intron 25.0%
! TATATGACAATGGTAGAAAA+AGG - Chr7:3339604-3339623 None:intergenic 25.0%
! TATCTAATATAAAGCAACGA+CGG - Chr7:3336344-3336363 None:intergenic 25.0%
! TCAGTGTAATTATTTGTATC+GGG - Chr7:3332285-3332304 None:intergenic 25.0%
! TCCTAAAAGTTATGAAATAG+CGG + Chr7:3336670-3336689 MsG0780036139.01.T01:intron 25.0%
! TCTAATTTAAATCATACCCT+TGG + Chr7:3333382-3333401 MsG0780036139.01.T01:intron 25.0%
! TCTCAGTTAGAATAAGTTTA+TGG - Chr7:3334734-3334753 None:intergenic 25.0%
! TGAATACCTATCACAAAATA+GGG - Chr7:3337156-3337175 None:intergenic 25.0%
! TGTTGAAATTATTCTCAAAG+TGG - Chr7:3338305-3338324 None:intergenic 25.0%
! TTTCACGTAAAATGAAATAG+CGG - Chr7:3336140-3336159 None:intergenic 25.0%
! TTTGAGCTAATATTAACTAG+AGG - Chr7:3335767-3335786 None:intergenic 25.0%
!! AAATATATTTTTCACTGGCA+CGG + Chr7:3338969-3338988 MsG0780036139.01.T01:intron 25.0%
!! CATAATTTTCAACTTATGAC+AGG - Chr7:3335395-3335414 None:intergenic 25.0%
!! TCAGGTAAACAATTTCTTTT+TGG + Chr7:3338199-3338218 MsG0780036139.01.T01:intron 25.0%
!! TCAGTCAAAACAAATTTTGA+TGG - Chr7:3334069-3334088 None:intergenic 25.0%
!! TTCGTTTCAAAAGCAATTTT+CGG - Chr7:3332765-3332784 None:intergenic 25.0%
!! TTTTATCCATCTAATTGTCA+TGG + Chr7:3334208-3334227 MsG0780036139.01.T01:intron 25.0%
!! TTTTGAATTTAATTGTGCTC+AGG + Chr7:3338081-3338100 MsG0780036139.01.T01:intron 25.0%
!!! AAAAAAAGCGCTTATCAAAA+CGG - Chr7:3331507-3331526 None:intergenic 25.0%
!!! ATTGCTTCAGTATTATTTTG+TGG + Chr7:3333988-3334007 MsG0780036139.01.T01:intron 25.0%
!!! GAGTTTAGGTTTTACAAAAA+TGG + Chr7:3331581-3331600 MsG0780036139.01.T01:exon 25.0%
!!! TAAATTCCAGCTTTTGAAAA+TGG - Chr7:3339361-3339380 None:intergenic 25.0%
!!! TCAAAATTTGTTTTGACTGA+AGG + Chr7:3334069-3334088 MsG0780036139.01.T01:intron 25.0%
!!! TTGAAAACATTGATTTTTGC+CGG + Chr7:3336838-3336857 MsG0780036139.01.T01:intron 25.0%
AACAGATCATCAAATAGCAT+TGG - Chr7:3339744-3339763 None:intergenic 30.0%
AACTACAAAGTACAAAGACA+TGG - Chr7:3335033-3335052 None:intergenic 30.0%
AAGCATAATTGACACAGATA+AGG - Chr7:3337360-3337379 None:intergenic 30.0%
ACTACAGTACAAAGCAAATA+AGG - Chr7:3333908-3333927 None:intergenic 30.0%
AGAACCATAGTAGTTAATAG+CGG - Chr7:3336757-3336776 None:intergenic 30.0%
AGAGAGAAACTGAAGTTATT+AGG - Chr7:3336224-3336243 None:intergenic 30.0%
AGATTATTCTGTGTAAGCAA+TGG + Chr7:3335072-3335091 MsG0780036139.01.T01:intron 30.0%
AGCCATTCTCAAATTCAAAT+AGG + Chr7:3334134-3334153 MsG0780036139.01.T01:intron 30.0%
AGCCTATTTGAATTTGAGAA+TGG - Chr7:3334139-3334158 None:intergenic 30.0%
ATAACAGCTATATAAAAGGG+GGG - Chr7:3335148-3335167 None:intergenic 30.0%
ATATGTCAATGTGAGAAATC+TGG + Chr7:3333586-3333605 MsG0780036139.01.T01:intron 30.0%
ATCCCATTGAATCACAAAAA+TGG - Chr7:3334182-3334201 None:intergenic 30.0%
ATCTGCTTAATCATTCTACT+GGG - Chr7:3337714-3337733 None:intergenic 30.0%
ATTAGAGCTATCATTAACCT+CGG - Chr7:3337868-3337887 None:intergenic 30.0%
ATTCCAACATAACATAGCAT+TGG - Chr7:3336381-3336400 None:intergenic 30.0%
ATTTGCTTTGTACTGTAGTA+GGG + Chr7:3333909-3333928 MsG0780036139.01.T01:intron 30.0%
CAAACATAAAAGACAGAGAT+TGG - Chr7:3335008-3335027 None:intergenic 30.0%
CAAATCAGGAGTGAAATAAT+TGG - Chr7:3337642-3337661 None:intergenic 30.0%
CACACCGTAATTTATGAAAA+TGG + Chr7:3332678-3332697 MsG0780036139.01.T01:intron 30.0%
CACAGTAAAGAGAAATGTTT+GGG - Chr7:3335547-3335566 None:intergenic 30.0%
CAGTGTAATTATTTGTATCG+GGG - Chr7:3332284-3332303 None:intergenic 30.0%
CCTTAATGTTAATAGAAGCA+AGG - Chr7:3333501-3333520 None:intergenic 30.0%
CCTTGCTTCTATTAACATTA+AGG + Chr7:3333498-3333517 MsG0780036139.01.T01:intron 30.0%
CTAATCAGAGTAGTTAATAG+CGG + Chr7:3335981-3336000 MsG0780036139.01.T01:intron 30.0%
CTCGATAATCAACATCATAT+TGG - Chr7:3339872-3339891 None:intergenic 30.0%
CTTATAAGGTCATAGATGTT+AGG - Chr7:3334686-3334705 None:intergenic 30.0%
CTTCCTTCTTTCATTCTTTA+CGG + Chr7:3336242-3336261 MsG0780036139.01.T01:intron 30.0%
GAATCTCATAGATTAAGCAA+AGG - Chr7:3333698-3333717 None:intergenic 30.0%
GAATGTTAAGAAACAGGTAA+AGG + Chr7:3339301-3339320 MsG0780036139.01.T01:intron 30.0%
GAATTACATGTTCTCATTTG+TGG + Chr7:3339451-3339470 MsG0780036139.01.T01:intron 30.0%
GAGAGAAACTGAAGTTATTA+GGG - Chr7:3336223-3336242 None:intergenic 30.0%
GATAATCAACATCATATTGG+AGG - Chr7:3339869-3339888 None:intergenic 30.0%
GGAAACTTTGGATTCTATAT+TGG + Chr7:3334332-3334351 MsG0780036139.01.T01:CDS 30.0%
GGATTCATATGTTAGTTGTA+TGG + Chr7:3335714-3335733 MsG0780036139.01.T01:intron 30.0%
GGTAACTGACAATAATGTTA+TGG - Chr7:3339400-3339419 None:intergenic 30.0%
GTACTAATTAGATAGTCCAA+GGG - Chr7:3333401-3333420 None:intergenic 30.0%
TAAATTAGATTAGTGCCTAG+TGG - Chr7:3333371-3333390 None:intergenic 30.0%
TAGTAATGTATAAGGCTTAC+CGG - Chr7:3337894-3337913 None:intergenic 30.0%
TATAGAATCCAAAGTTTCCT+TGG - Chr7:3334331-3334350 None:intergenic 30.0%
TATTTGCTTTGTACTGTAGT+AGG + Chr7:3333908-3333927 MsG0780036139.01.T01:intron 30.0%
TCACAGTAAAGAGAAATGTT+TGG - Chr7:3335548-3335567 None:intergenic 30.0%
TCCCATTGAATCACAAAAAT+GGG - Chr7:3334181-3334200 None:intergenic 30.0%
TCTCAAATTATTAACGGTGT+CGG + Chr7:3332317-3332336 MsG0780036139.01.T01:intron 30.0%
TGAAAATACAAGATTCTCCT+TGG + Chr7:3336155-3336174 MsG0780036139.01.T01:intron 30.0%
TGAAATTATTCTCAAAGTGG+TGG - Chr7:3338302-3338321 None:intergenic 30.0%
TGACAATGGTAAAATAGGAT+TGG + Chr7:3339235-3339254 MsG0780036139.01.T01:intron 30.0%
TGAGGAGATGAAATATGATT+GGG - Chr7:3339169-3339188 None:intergenic 30.0%
TGAGTTTGTCTTGTAACATT+GGG + Chr7:3337962-3337981 MsG0780036139.01.T01:intron 30.0%
TGTACTAATTAGATAGTCCA+AGG - Chr7:3333402-3333421 None:intergenic 30.0%
TTAACAAGATTGTCTTAGAC+AGG - Chr7:3335927-3335946 None:intergenic 30.0%
TTATTTGGTCAAGTTCATGT+AGG + Chr7:3338274-3338293 MsG0780036139.01.T01:intron 30.0%
TTCATATGTTAGTTGTATGG+GGG + Chr7:3335717-3335736 MsG0780036139.01.T01:intron 30.0%
TTCTATATTGGAACTTCAAG+AGG + Chr7:3334344-3334363 MsG0780036139.01.T01:CDS 30.0%
TTGAGGAGATGAAATATGAT+TGG - Chr7:3339170-3339189 None:intergenic 30.0%
TTGAGTTTGTCTTGTAACAT+TGG + Chr7:3337961-3337980 MsG0780036139.01.T01:intron 30.0%
TTTCCAATGCTATGTTATGT+TGG + Chr7:3336375-3336394 MsG0780036139.01.T01:intron 30.0%
! AACAACTTGAGAAAGAGTAT+AGG + Chr7:3331914-3331933 MsG0780036139.01.T01:CDS 30.0%
! AATTGTTTACCTGATGATGA+AGG - Chr7:3338193-3338212 None:intergenic 30.0%
! ACAACTTGAGAAAGAGTATA+GGG + Chr7:3331915-3331934 MsG0780036139.01.T01:CDS 30.0%
! AGACTATGAAGTCAGTATTT+TGG + Chr7:3334807-3334826 MsG0780036139.01.T01:intron 30.0%
! AGATTTGATAACTTCTTCCA+AGG + Chr7:3334311-3334330 MsG0780036139.01.T01:CDS 30.0%
! AGCATCTAAAGTAGAAAAGA+TGG + Chr7:3332166-3332185 MsG0780036139.01.T01:intron 30.0%
! AGTTCTTCAAAGTATTTCTG+AGG - Chr7:3333757-3333776 None:intergenic 30.0%
! ATAAGACTCTTTTGCATGTA+TGG + Chr7:3339429-3339448 MsG0780036139.01.T01:intron 30.0%
! ATCTAAAGTAGAAAAGATGG+TGG + Chr7:3332169-3332188 MsG0780036139.01.T01:intron 30.0%
! ATGCTATTTGATGATCTGTT+TGG + Chr7:3339744-3339763 MsG0780036139.01.T01:CDS 30.0%
! CAATATGATGTTGATTATCG+AGG + Chr7:3339870-3339889 MsG0780036139.01.T01:three_prime_UTR 30.0%
! CATTTGGAATGTTAAGAAAC+AGG + Chr7:3339295-3339314 MsG0780036139.01.T01:intron 30.0%
! CTTTTAATGAAGGTTCAGAA+AGG + Chr7:3337024-3337043 MsG0780036139.01.T01:intron 30.0%
! GATTTTACTTCCCAATCAAA+GGG - Chr7:3340087-3340106 None:intergenic 30.0%
! GGTAGATTATTTTCCATTCT+TGG + Chr7:3335521-3335540 MsG0780036139.01.T01:intron 30.0%
! TAACTTCCCTATTTTGTGAT+AGG + Chr7:3337147-3337166 MsG0780036139.01.T01:intron 30.0%
! TAGCAAAATTTTCAGTTCAG+AGG - Chr7:3339057-3339076 None:intergenic 30.0%
! TGATTTTACTTCCCAATCAA+AGG - Chr7:3340088-3340107 None:intergenic 30.0%
! TGGATGAATATCTAGCTTAT+GGG - Chr7:3334761-3334780 None:intergenic 30.0%
! TTGGATGAATATCTAGCTTA+TGG - Chr7:3334762-3334781 None:intergenic 30.0%
!! AAAGAGTCTTATTTCAAGAG+AGG - Chr7:3339421-3339440 None:intergenic 30.0%
!! ACCGCTATTTCATAACTTTT+AGG - Chr7:3336674-3336693 None:intergenic 30.0%
!! ATTTAGATTAAGGGAGTGTT+TGG + Chr7:3332929-3332948 MsG0780036139.01.T01:intron 30.0%
!! CGTAATGTTTTGAATTTTGG+TGG + Chr7:3336488-3336507 MsG0780036139.01.T01:intron 30.0%
!! GAGCATTGATACTTGTAAAA+TGG - Chr7:3332870-3332889 None:intergenic 30.0%
!! TAATGATAGCTCTAATGAAC+CGG + Chr7:3337872-3337891 MsG0780036139.01.T01:CDS 30.0%
!! TTGAAAACATTGATTTGTGC+TGG + Chr7:3336944-3336963 MsG0780036139.01.T01:intron 30.0%
!! TTTGATTTTTGTGATGGTGT+AGG + Chr7:3331768-3331787 MsG0780036139.01.T01:intron 30.0%
!!! TTGCTTTTGAAACGAAATGT+TGG + Chr7:3332769-3332788 MsG0780036139.01.T01:intron 30.0%
AAACATGGTTAACTTTCTGC+AGG + Chr7:3334233-3334252 MsG0780036139.01.T01:intron 35.0%
AAACTAAGCTTAGGTCGTTT+GGG + Chr7:3332378-3332397 MsG0780036139.01.T01:intron 35.0%
AAAGGCTCAAACTAGTTCAA+TGG - Chr7:3338456-3338475 None:intergenic 35.0%
AAAGTCAAAGTCAAAACTGG+TGG - Chr7:3338765-3338784 None:intergenic 35.0%
AACATTAAGAAAGATCCTCC+AGG - Chr7:3340019-3340038 None:intergenic 35.0%
AACTTCTTCCAAGGAAACTT+TGG + Chr7:3334320-3334339 MsG0780036139.01.T01:CDS 35.0%
AAGCATAGAAATATCTCTGC+AGG - Chr7:3340046-3340065 None:intergenic 35.0%
AAGTATTTGGACACACCATT+TGG - Chr7:3338663-3338682 None:intergenic 35.0%
AATGGAGAGAAGGAAAAGTT+GGG + Chr7:3335356-3335375 MsG0780036139.01.T01:intron 35.0%
ACAATTGATCCTTCATCATC+AGG + Chr7:3338181-3338200 MsG0780036139.01.T01:CDS 35.0%
ACATAGAATGTATGTAGCTC+TGG - Chr7:3332899-3332918 None:intergenic 35.0%
ACCAAAATAGAAGCAAAGCA+TGG - Chr7:3335179-3335198 None:intergenic 35.0%
ACGGCTTCTATCAAAAATGT+CGG + Chr7:3337314-3337333 MsG0780036139.01.T01:intron 35.0%
ACTCCCTTAATCTAAATTGC+AGG - Chr7:3332926-3332945 None:intergenic 35.0%
AGATTGGTAAAGAACCCATA+TGG + Chr7:3332039-3332058 MsG0780036139.01.T01:intron 35.0%
AGCACCTGCAATTTAGATTA+AGG + Chr7:3332919-3332938 MsG0780036139.01.T01:intron 35.0%
AGCATAGAAATATCTCTGCA+GGG - Chr7:3340045-3340064 None:intergenic 35.0%
AGCTGTTGTTATAGAGGAAT+TGG + Chr7:3333646-3333665 MsG0780036139.01.T01:intron 35.0%
ATACCTGATTACACTAAGGT+TGG + Chr7:3338825-3338844 MsG0780036139.01.T01:intron 35.0%
ATGAATTGCTACCTCGTTAT+AGG - Chr7:3331691-3331710 None:intergenic 35.0%
ATGACAATCTTGATCAAGAG+TGG + Chr7:3337081-3337100 MsG0780036139.01.T01:CDS 35.0%
ATTAACTAGAGGCGAATTGT+TGG - Chr7:3335756-3335775 None:intergenic 35.0%
CACAAAATAGGGAAGTTAGA+AGG - Chr7:3337145-3337164 None:intergenic 35.0%
CACAATTGTATCTTGCAGTA+TGG + Chr7:3337474-3337493 MsG0780036139.01.T01:intron 35.0%
CAGTAAGTGTCAATGACAAA+GGG - Chr7:3337827-3337846 None:intergenic 35.0%
CATATTTCATCTCCTCAATG+TGG + Chr7:3339172-3339191 MsG0780036139.01.T01:intron 35.0%
CATCTGCTTAATCATTCTAC+TGG - Chr7:3337715-3337734 None:intergenic 35.0%
CCATACTTCATAGATAAAGC+TGG - Chr7:3335293-3335312 None:intergenic 35.0%
CCCATTGAATCACAAAAATG+GGG - Chr7:3334180-3334199 None:intergenic 35.0%
CCTCAAAAAGTCGTAAGATA+AGG + Chr7:3339555-3339574 MsG0780036139.01.T01:CDS 35.0%
CTATCCGCTATTAACTACTA+TGG + Chr7:3336750-3336769 MsG0780036139.01.T01:intron 35.0%
CTGAATGTAATCACATGTGT+CGG + Chr7:3337276-3337295 MsG0780036139.01.T01:intron 35.0%
GACTTGTGGATTCTATAGTA+CGG + Chr7:3332414-3332433 MsG0780036139.01.T01:intron 35.0%
GATTGGTAAAGAACCCATAT+GGG + Chr7:3332040-3332059 MsG0780036139.01.T01:intron 35.0%
GCACCTGCAATTTAGATTAA+GGG + Chr7:3332920-3332939 MsG0780036139.01.T01:intron 35.0%
GCTGTTGTTATAGAGGAATT+GGG + Chr7:3333647-3333666 MsG0780036139.01.T01:intron 35.0%
GCTTAATCTATGAGATTCTG+TGG + Chr7:3333700-3333719 MsG0780036139.01.T01:intron 35.0%
GGAAAGGTTATCTGTCTATA+TGG + Chr7:3335443-3335462 MsG0780036139.01.T01:intron 35.0%
GGACGTGTAAAGTGAAAAAA+AGG - Chr7:3338008-3338027 None:intergenic 35.0%
GGGAAGAACTATTATAGGAA+AGG + Chr7:3335427-3335446 MsG0780036139.01.T01:intron 35.0%
GGTGTCTGATACAACTTATA+TGG + Chr7:3332971-3332990 MsG0780036139.01.T01:intron 35.0%
TAACAGCTATATAAAAGGGG+GGG - Chr7:3335147-3335166 None:intergenic 35.0%
TATAGAGGAATTGGGTTACA+GGG + Chr7:3333655-3333674 MsG0780036139.01.T01:intron 35.0%
TCTCACATTGACATATTGCA+TGG - Chr7:3333582-3333601 None:intergenic 35.0%
TGAGATTATTCATGAGCCAT+CGG - Chr7:3333624-3333643 None:intergenic 35.0%
TGATGATATGTCCTATAACG+AGG + Chr7:3331677-3331696 MsG0780036139.01.T01:CDS 35.0%
TGCAGAAAGTTAACCATGTT+TGG - Chr7:3334234-3334253 None:intergenic 35.0%
TGGATGGAAAGATGATGAAA+TGG + Chr7:3331891-3331910 MsG0780036139.01.T01:CDS 35.0%
TGTCAGGGAAGAACTATTAT+AGG + Chr7:3335422-3335441 MsG0780036139.01.T01:intron 35.0%
TGTTTAGTATGACCACATTG+AGG - Chr7:3339187-3339206 None:intergenic 35.0%
TTAACTAGAGGCGAATTGTT+GGG - Chr7:3335755-3335774 None:intergenic 35.0%
TTACTGTGATTGAAAGCAGA+TGG + Chr7:3335559-3335578 MsG0780036139.01.T01:intron 35.0%
TTATAGAGGAATTGGGTTAC+AGG + Chr7:3333654-3333673 MsG0780036139.01.T01:intron 35.0%
TTGAATCACAAAAATGGGGA+AGG - Chr7:3334176-3334195 None:intergenic 35.0%
TTGTTAGCTAGCTGTAAGAT+TGG + Chr7:3332023-3332042 MsG0780036139.01.T01:intron 35.0%
TTGTTTCATGCTATGAAGCA+CGG + Chr7:3337213-3337232 MsG0780036139.01.T01:intron 35.0%
TTTATAGAGGAAGTCTTGCT+TGG - Chr7:3338690-3338709 None:intergenic 35.0%
! ACCATGCTTTGCTTCTATTT+TGG + Chr7:3335175-3335194 MsG0780036139.01.T01:intron 35.0%
! ATATCTGCATGATGTTGCTT+TGG + Chr7:3333529-3333548 MsG0780036139.01.T01:intron 35.0%
! ATGGAGTAGACTTTTGTGTT+TGG + Chr7:3333852-3333871 MsG0780036139.01.T01:intron 35.0%
! CCAGCTTTATCTATGAAGTA+TGG + Chr7:3335290-3335309 MsG0780036139.01.T01:intron 35.0%
! CCTTATCTTACGACTTTTTG+AGG - Chr7:3339558-3339577 None:intergenic 35.0%
! CTCAAGAATTTTGTACCAGA+GGG - Chr7:3334095-3334114 None:intergenic 35.0%
! GAAGAACTTGAAGCATCATA+AGG + Chr7:3333769-3333788 MsG0780036139.01.T01:CDS 35.0%
! GTACTACCATTTTCAAAAGC+TGG + Chr7:3339352-3339371 MsG0780036139.01.T01:intron 35.0%
! TATCCCGCTATAGCATTTTT+GGG + Chr7:3336709-3336728 MsG0780036139.01.T01:intron 35.0%
! TCAGTTGAAGACTTTGTTTC+TGG + Chr7:3333228-3333247 MsG0780036139.01.T01:intron 35.0%
! TTTTGCGAGAAATGCGTTTT+GGG - Chr7:3336286-3336305 None:intergenic 35.0%
! TTTTTGCGAGAAATGCGTTT+TGG - Chr7:3336287-3336306 None:intergenic 35.0%
!! ATGTTGCTTTGGCATTATTG+TGG + Chr7:3333540-3333559 MsG0780036139.01.T01:intron 35.0%
!! CCCCATTTTTGTGATTCAAT+GGG + Chr7:3334177-3334196 MsG0780036139.01.T01:intron 35.0%
!! TAGTAGTTAATAGCGGATAG+CGG - Chr7:3336750-3336769 None:intergenic 35.0%
!! TCCCCATTTTTGTGATTCAA+TGG + Chr7:3334176-3334195 MsG0780036139.01.T01:intron 35.0%
AAACAGAATTAGCGAGACGA+AGG - Chr7:3335866-3335885 None:intergenic 40.0%
AAAGTGCAAAAGCTGTGACA+TGG - Chr7:3337392-3337411 None:intergenic 40.0%
AAATGGGGAAGGAAAATACC+TGG - Chr7:3334165-3334184 None:intergenic 40.0%
AAATTCAAATAGGCTACCCC+AGG + Chr7:3334144-3334163 MsG0780036139.01.T01:intron 40.0%
AACAGAATTAGCGAGACGAA+GGG - Chr7:3335865-3335884 None:intergenic 40.0%
AACCCTTACACAAACATGCA+TGG - Chr7:3333072-3333091 None:intergenic 40.0%
AAGAGTGGTCACAGATTTCT+CGG + Chr7:3337096-3337115 MsG0780036139.01.T01:CDS 40.0%
AAGGATGAAGATCTCCTGAA+AGG + Chr7:3333788-3333807 MsG0780036139.01.T01:CDS 40.0%
AATCTTACAGCTCCTGTTCT+TGG - Chr7:3331951-3331970 None:intergenic 40.0%
AATGGGGAAGGAAAATACCT+GGG - Chr7:3334164-3334183 None:intergenic 40.0%
ACACACACACGTTTGAGAAA+AGG + Chr7:3338566-3338585 MsG0780036139.01.T01:intron 40.0%
ACCCATTATGGGTCTATTGT+AGG - Chr7:3333101-3333120 None:intergenic 40.0%
ACCCTACAATAGACCCATAA+TGG + Chr7:3333096-3333115 MsG0780036139.01.T01:intron 40.0%
ACGTGGCTTGAATTTCACTT+TGG + Chr7:3338997-3339016 MsG0780036139.01.T01:intron 40.0%
ACTGGGATCTCTCATATAAG+CGG - Chr7:3337697-3337716 None:intergenic 40.0%
AGAAATGTTTGGGCCAAGAA+TGG - Chr7:3335537-3335556 None:intergenic 40.0%
AGGATGAAGATCTCCTGAAA+GGG + Chr7:3333789-3333808 MsG0780036139.01.T01:CDS 40.0%
AGGTTGACATTCACCTAACA+CGG - Chr7:3338902-3338921 None:intergenic 40.0%
AGTCAATCAACAAATGGCAG+AGG + Chr7:3337512-3337531 MsG0780036139.01.T01:CDS 40.0%
AGTCTTCATACGACATGACA+TGG - Chr7:3334792-3334811 None:intergenic 40.0%
AGTGATGAGGAAGAAGAAGA+TGG + Chr7:3331853-3331872 MsG0780036139.01.T01:CDS 40.0%
ATCAGGTAAAGTTCTGTGAC+TGG + Chr7:3337590-3337609 MsG0780036139.01.T01:intron 40.0%
CATAGGTGGAAACTAAGCTT+AGG + Chr7:3332369-3332388 MsG0780036139.01.T01:intron 40.0%
CATGAAGAACTCACCATTAC+TGG - Chr7:3334976-3334995 None:intergenic 40.0%
CCAGTAAGTGTCAATGACAA+AGG - Chr7:3337828-3337847 None:intergenic 40.0%
CCCATTATGGGTCTATTGTA+GGG - Chr7:3333100-3333119 None:intergenic 40.0%
CCCTACAATAGACCCATAAT+GGG + Chr7:3333097-3333116 MsG0780036139.01.T01:intron 40.0%
CCTTTGTCATTGACACTTAC+TGG + Chr7:3337825-3337844 MsG0780036139.01.T01:intron 40.0%
CTAATTGTCATGGCCAAACA+TGG + Chr7:3334218-3334237 MsG0780036139.01.T01:intron 40.0%
CTCACTAGCTGTTGTTATAG+AGG + Chr7:3333640-3333659 MsG0780036139.01.T01:intron 40.0%
CTTGCTTGGTCACAAGTATT+TGG - Chr7:3338676-3338695 None:intergenic 40.0%
GAAACTAAGCTTAGGTCGTT+TGG + Chr7:3332377-3332396 MsG0780036139.01.T01:intron 40.0%
GAATGGAGAGAAGGAAAAGT+TGG + Chr7:3335355-3335374 MsG0780036139.01.T01:intron 40.0%
GAGAGAGAGAGAGAGAATTT+CGG + Chr7:3332142-3332161 MsG0780036139.01.T01:intron 40.0%
GAGATTATTCATGAGCCATC+GGG - Chr7:3333623-3333642 None:intergenic 40.0%
GATTGTCTTAGACAGGACAA+AGG - Chr7:3335920-3335939 None:intergenic 40.0%
GCATGTAGATAGAAGACTTG+TGG + Chr7:3332400-3332419 MsG0780036139.01.T01:intron 40.0%
GCTAGATATTCATCCAAACC+AGG + Chr7:3334765-3334784 MsG0780036139.01.T01:intron 40.0%
GGGACAAGTCAATCAACAAA+TGG + Chr7:3337506-3337525 MsG0780036139.01.T01:CDS 40.0%
GTCCATGCATGTTTGTGTAA+GGG + Chr7:3333067-3333086 MsG0780036139.01.T01:intron 40.0%
GTGATGAGGAAGAAGAAGAT+GGG + Chr7:3331854-3331873 MsG0780036139.01.T01:CDS 40.0%
GTGTGCTTTCTGTTTCACTA+TGG + Chr7:3333833-3333852 MsG0780036139.01.T01:intron 40.0%
GTTCCAACCTTAGTGTAATC+AGG - Chr7:3338831-3338850 None:intergenic 40.0%
GTTGGATGTGTAGTAAGACT+AGG + Chr7:3332071-3332090 MsG0780036139.01.T01:intron 40.0%
GTTTGGCCATGACAATTAGA+TGG - Chr7:3334217-3334236 None:intergenic 40.0%
TACAAGTATCAATGCTCCAG+AGG + Chr7:3332873-3332892 MsG0780036139.01.T01:intron 40.0%
TAGTTTCCACCTATGAAGCA+CGG - Chr7:3332364-3332383 None:intergenic 40.0%
TATAAAGCACGGACACTCTT+CGG + Chr7:3332197-3332216 MsG0780036139.01.T01:intron 40.0%
TATTGGAACTTCAAGAGGTG+TGG + Chr7:3334349-3334368 MsG0780036139.01.T01:intron 40.0%
TCAAAGCTAGAAGACTTTGG+TGG - Chr7:3335612-3335631 None:intergenic 40.0%
TCATATAAGCGGCAACTTGA+TGG - Chr7:3337686-3337705 None:intergenic 40.0%
TGATGAGGAAGAAGAAGATG+GGG + Chr7:3331855-3331874 MsG0780036139.01.T01:CDS 40.0%
TGCAAATACAAGTACGTGCT+CGG + Chr7:3332831-3332850 MsG0780036139.01.T01:intron 40.0%
TGCTCAAAGCTAGAAGACTT+TGG - Chr7:3335615-3335634 None:intergenic 40.0%
TGGTGGAAACCTATAAAGCA+CGG + Chr7:3332186-3332205 MsG0780036139.01.T01:intron 40.0%
TGTCCATGCATGTTTGTGTA+AGG + Chr7:3333066-3333085 MsG0780036139.01.T01:intron 40.0%
TGTTAGGTGAATGTCAACCT+AGG + Chr7:3338902-3338921 MsG0780036139.01.T01:intron 40.0%
TTGCAGTATGGCAACTTTCA+GGG + Chr7:3337486-3337505 MsG0780036139.01.T01:intron 40.0%
! AAATGATGATAGCGAGTTGG+AGG + Chr7:3331792-3331811 MsG0780036139.01.T01:CDS 40.0%
! AAGTCTTATCCCACTAAGTG+GGG - Chr7:3332592-3332611 None:intergenic 40.0%
! ATATTTTTCACTGGCACGGT+AGG + Chr7:3338973-3338992 MsG0780036139.01.T01:intron 40.0%
! ATCCCGCTATAGCATTTTTG+GGG + Chr7:3336710-3336729 MsG0780036139.01.T01:intron 40.0%
! ATTTTGTGTGTGCGTCCAAA+TGG + Chr7:3338645-3338664 MsG0780036139.01.T01:intron 40.0%
! CAAGTCTTATCCCACTAAGT+GGG - Chr7:3332593-3332612 None:intergenic 40.0%
! CTATCCCGCTATAGCATTTT+TGG + Chr7:3336708-3336727 MsG0780036139.01.T01:intron 40.0%
! GCTCAAGAATTTTGTACCAG+AGG - Chr7:3334096-3334115 None:intergenic 40.0%
! GGTAAATGATGATAGCGAGT+TGG + Chr7:3331789-3331808 MsG0780036139.01.T01:intron 40.0%
! TTTGCGAGAAATGCGTTTTG+GGG - Chr7:3336285-3336304 None:intergenic 40.0%
!! CTAATGCTCTAAGAACAACC+TGG + Chr7:3339998-3340017 MsG0780036139.01.T01:three_prime_UTR 40.0%
!! GTTTGGAGAGTGTTATTACC+AGG - Chr7:3335894-3335913 None:intergenic 40.0%
!! GTTTGTTTTCTGCTACCACT+AGG + Chr7:3333353-3333372 MsG0780036139.01.T01:intron 40.0%
!! TTAGCCTTAGCCCTTTGATT+GGG + Chr7:3340074-3340093 MsG0780036139.01.T01:three_prime_UTR 40.0%
!! TTTAGCCTTAGCCCTTTGAT+TGG + Chr7:3340073-3340092 MsG0780036139.01.T01:three_prime_UTR 40.0%
!!! GTTTTTCTAGGATCTTCCTC+TGG - Chr7:3332477-3332496 None:intergenic 40.0%
!!! TCTTACGACTTTTTGAGGCA+CGG - Chr7:3339553-3339572 None:intergenic 40.0%
!!! TGGCATTGTTTTAACCCATG+TGG + Chr7:3332562-3332581 MsG0780036139.01.T01:intron 40.0%
!!! TTTTGGGGTGAGAAGATGAA+AGG - Chr7:3336270-3336289 None:intergenic 40.0%
AAAACCGCTATGCAGTGTTG+CGG - Chr7:3336106-3336125 None:intergenic 45.0%
AAACTTTATGGCTCCTCGAC+CGG + Chr7:3339698-3339717 MsG0780036139.01.T01:CDS 45.0%
AAAGTTCTGTGACTGGACTG+TGG + Chr7:3337597-3337616 MsG0780036139.01.T01:intron 45.0%
AAGCGCTTATCAAAACGGAG+AGG - Chr7:3331502-3331521 None:intergenic 45.0%
ACATTCACCTAACACGGGAA+AGG - Chr7:3338896-3338915 None:intergenic 45.0%
ACGTGTGTGTGTGTCCAAAT+TGG - Chr7:3338558-3338577 None:intergenic 45.0%
ACTTCCCAATCAAAGGGCTA+AGG - Chr7:3340081-3340100 None:intergenic 45.0%
AGACAGGACAAAGGCAAGTT+TGG - Chr7:3335911-3335930 None:intergenic 45.0%
AGATTTCTCGGATGCACAAC+AGG + Chr7:3337108-3337127 MsG0780036139.01.T01:CDS 45.0%
AGGATGACACAAGTGACAAC+CGG + Chr7:3337532-3337551 MsG0780036139.01.T01:CDS 45.0%
AGTACGGAGAGTAGATCAGA+TGG + Chr7:3332430-3332449 MsG0780036139.01.T01:intron 45.0%
AGTCAAATCACTAGAGCCAG+AGG + Chr7:3332458-3332477 MsG0780036139.01.T01:intron 45.0%
AGTTAATAGCGGCGCTATAG+CGG + Chr7:3335992-3336011 MsG0780036139.01.T01:intron 45.0%
ATACAAGTACGTGCTCGGTA+TGG + Chr7:3332836-3332855 MsG0780036139.01.T01:intron 45.0%
ATGGGGAAGGAAAATACCTG+GGG - Chr7:3334163-3334182 None:intergenic 45.0%
CAATGCCTTAAATGCTGCTG+AGG + Chr7:3335688-3335707 MsG0780036139.01.T01:intron 45.0%
CATTCACCTAACACGGGAAA+GGG - Chr7:3338895-3338914 None:intergenic 45.0%
CCAACGCAACATTCCCATAT+GGG - Chr7:3332056-3332075 None:intergenic 45.0%
CCACATTCCTAAAGCAACTG+TGG - Chr7:3335109-3335128 None:intergenic 45.0%
CCACTTAGTGGGATAAGACT+TGG + Chr7:3332591-3332610 MsG0780036139.01.T01:intron 45.0%
CCTGCAACAGGAAACAAATC+AGG - Chr7:3337656-3337675 None:intergenic 45.0%
CGACCCCAAAAATGCTATAG+CGG - Chr7:3336716-3336735 None:intergenic 45.0%
CTTCTTTACGATCCTCGCAA+AGG - Chr7:3339094-3339113 None:intergenic 45.0%
CTTGCAGTATGGCAACTTTC+AGG + Chr7:3337485-3337504 MsG0780036139.01.T01:intron 45.0%
GAATCAGACGAGACAGTTAG+AGG + Chr7:3334279-3334298 MsG0780036139.01.T01:CDS 45.0%
GACCCCAAAAATGCTATAGC+GGG - Chr7:3336715-3336734 None:intergenic 45.0%
GAGTCGTAAGAATGGAGAGA+AGG + Chr7:3335346-3335365 MsG0780036139.01.T01:intron 45.0%
GATGAGGAAGAAGAAGATGG+GGG + Chr7:3331856-3331875 MsG0780036139.01.T01:CDS 45.0%
GATTCTTTGCAATCAGAGCC+TGG - Chr7:3334938-3334957 None:intergenic 45.0%
GCAAGGACTCTCAGTCAAAA+AGG - Chr7:3333484-3333503 None:intergenic 45.0%
GCGCCGTAAAGAATGAAAGA+AGG - Chr7:3336248-3336267 None:intergenic 45.0%
GCTGAGAAGAGTCGTAAGAA+TGG + Chr7:3335338-3335357 MsG0780036139.01.T01:intron 45.0%
GGATCTTCATCACCAAGAAC+AGG + Chr7:3331936-3331955 MsG0780036139.01.T01:CDS 45.0%
GGATGTGTAGTAAGACTAGG+CGG + Chr7:3332074-3332093 MsG0780036139.01.T01:intron 45.0%
GGTTGACATTCACCTAACAC+GGG - Chr7:3338901-3338920 None:intergenic 45.0%
TACAAGTACGTGCTCGGTAT+GGG + Chr7:3332837-3332856 MsG0780036139.01.T01:intron 45.0%
TATCATTAACCTCGGCAACC+TGG - Chr7:3337860-3337879 None:intergenic 45.0%
TATCTCATAACGCTACGCCA+TGG - Chr7:3336068-3336087 None:intergenic 45.0%
TATTTGTATCGGGGTCGTGT+CGG - Chr7:3332275-3332294 None:intergenic 45.0%
TCAGAATCGTCCAGAAGTTC+AGG - Chr7:3338127-3338146 None:intergenic 45.0%
TCAGTTGCTCAAGCCAGTAA+TGG + Chr7:3334960-3334979 MsG0780036139.01.T01:CDS 45.0%
TCCAACGCAACATTCCCATA+TGG - Chr7:3332057-3332076 None:intergenic 45.0%
TCCTTTAATTGCAGCAGCAC+CGG - Chr7:3337554-3337573 None:intergenic 45.0%
TTGAATGCAACCTCATGCGT+TGG + Chr7:3332707-3332726 MsG0780036139.01.T01:intron 45.0%
! AAAGCAACGACGGCGTTTTA+CGG - Chr7:3336334-3336353 None:intergenic 45.0%
! ACTCGTACCACAGTTGCTTT+AGG + Chr7:3335099-3335118 MsG0780036139.01.T01:intron 45.0%
! CCAAGTCTTATCCCACTAAG+TGG - Chr7:3332594-3332613 None:intergenic 45.0%
! CTTGGTTCGTCAGACCAATT+TGG + Chr7:3338541-3338560 MsG0780036139.01.T01:intron 45.0%
! GAAACAGAAAGCACACCTTC+TGG - Chr7:3333829-3333848 None:intergenic 45.0%
! GTTCTTTTTCCCTGTCTGCT+TGG + Chr7:3337440-3337459 MsG0780036139.01.T01:intron 45.0%
! TCACTATCAGTGTCGCTGTT+TGG + Chr7:3333043-3333062 MsG0780036139.01.T01:intron 45.0%
! TTTTCACAGCTTGCCCTTTC+AGG - Chr7:3333805-3333824 None:intergenic 45.0%
!! ACTTACTGGCTTATGTCTCC+AGG + Chr7:3337839-3337858 MsG0780036139.01.T01:intron 45.0%
!! ATCAAATAGCATTGGCGCCA+TGG - Chr7:3339736-3339755 None:intergenic 45.0%
!! ATGCTCTAAGAACAACCTGG+AGG + Chr7:3340001-3340020 MsG0780036139.01.T01:three_prime_UTR 45.0%
!! CAAAAATGTCGGTGCTACAG+AGG + Chr7:3337325-3337344 MsG0780036139.01.T01:intron 45.0%
!! CCACAGTTGCTTTAGGAATG+TGG + Chr7:3335106-3335125 MsG0780036139.01.T01:intron 45.0%
!! CCTGATTTGTTTCCTGTTGC+AGG + Chr7:3337653-3337672 MsG0780036139.01.T01:intron 45.0%
!! GAAGAGTGTCCGTGCTTTAT+AGG - Chr7:3332198-3332217 None:intergenic 45.0%
!! TCAAATAGCATTGGCGCCAT+GGG - Chr7:3339735-3339754 None:intergenic 45.0%
!! TCGGTGTCAGACACTAGATA+CGG + Chr7:3337295-3337314 MsG0780036139.01.T01:intron 45.0%
!! TTACTGGCTTGAGCAACTGA+TGG - Chr7:3334960-3334979 None:intergenic 45.0%
!! TTTGGTGGACTCTTCGTGTT+AGG - Chr7:3335597-3335616 None:intergenic 45.0%
!!! CGCTATAGCATTTTTGGGGT+CGG + Chr7:3336714-3336733 MsG0780036139.01.T01:intron 45.0%
AACCCTTCCTTGCCTTGTCA+TGG + Chr7:3333123-3333142 MsG0780036139.01.T01:intron 50.0%
ACGGAGAGTAGATCAGATGG+AGG + Chr7:3332433-3332452 MsG0780036139.01.T01:intron 50.0%
ACTAAGTGGGGTCAACCACA+TGG - Chr7:3332580-3332599 None:intergenic 50.0%
AGAAAGCTCCCACCATGACA+AGG - Chr7:3333138-3333157 None:intergenic 50.0%
AGAAGAAGATGGGGGACAAG+AGG + Chr7:3331864-3331883 MsG0780036139.01.T01:CDS 50.0%
AGAGGATGAGGGAAGTGATG+AGG + Chr7:3331840-3331859 MsG0780036139.01.T01:CDS 50.0%
AGGAAGGGTTGGACCCATTA+TGG - Chr7:3333113-3333132 None:intergenic 50.0%
ATAGCATCAGCCAAGCAGAC+AGG - Chr7:3337453-3337472 None:intergenic 50.0%
ATGACAAGGCAAGGAAGGGT+TGG - Chr7:3333124-3333143 None:intergenic 50.0%
ATGTGGTTGACCCCACTTAG+TGG + Chr7:3332579-3332598 MsG0780036139.01.T01:intron 50.0%
CACAGCCAACCGTGATTATG+AGG - Chr7:3339799-3339818 None:intergenic 50.0%
CACCATGACAAGGCAAGGAA+GGG - Chr7:3333128-3333147 None:intergenic 50.0%
CATACGACATGACATGGACC+TGG - Chr7:3334786-3334805 None:intergenic 50.0%
CCCATATGGGAATGTTGCGT+TGG + Chr7:3332053-3332072 MsG0780036139.01.T01:intron 50.0%
CCTCACCTCAGCAGCATTTA+AGG - Chr7:3335696-3335715 None:intergenic 50.0%
CCTTAAATGCTGCTGAGGTG+AGG + Chr7:3335693-3335712 MsG0780036139.01.T01:intron 50.0%
CGCCATGGCTTATTGCATAG+CGG - Chr7:3336053-3336072 None:intergenic 50.0%
CGGAGAGTAGATCAGATGGA+GGG + Chr7:3332434-3332453 MsG0780036139.01.T01:intron 50.0%
CTAAGTGGGGTCAACCACAT+GGG - Chr7:3332579-3332598 None:intergenic 50.0%
CTATGAAGCACGGATACGCA+CGG - Chr7:3332354-3332373 None:intergenic 50.0%
CTGCTGCAGCCTCATAATCA+CGG + Chr7:3339787-3339806 MsG0780036139.01.T01:exon 50.0%
CTGGTCTGCATATAACCCGA+TGG + Chr7:3333605-3333624 MsG0780036139.01.T01:intron 50.0%
CTTATCAAAACGGAGAGGCG+TGG - Chr7:3331497-3331516 None:intergenic 50.0%
CTTCCTTGCCTTGTCATGGT+GGG + Chr7:3333127-3333146 MsG0780036139.01.T01:intron 50.0%
GAAATAGCGGTCATAGCGCT+AGG + Chr7:3336683-3336702 MsG0780036139.01.T01:intron 50.0%
GACATGACATGGACCTGGTT+TGG - Chr7:3334781-3334800 None:intergenic 50.0%
GACCGCTATGCAATAAGCCA+TGG + Chr7:3336048-3336067 MsG0780036139.01.T01:intron 50.0%
GAGGAAGATGGAGAGGATGA+GGG + Chr7:3331829-3331848 MsG0780036139.01.T01:CDS 50.0%
GATGGCTGATATCCTGCAAC+AGG - Chr7:3337668-3337687 None:intergenic 50.0%
GCAAGCTGTGAAAAGCCAGA+AGG + Chr7:3333811-3333830 MsG0780036139.01.T01:CDS 50.0%
GCTAATTCTGTTTGCGCACC+TGG + Chr7:3335873-3335892 MsG0780036139.01.T01:intron 50.0%
GGAAGGGTTGGACCCATTAT+GGG - Chr7:3333112-3333131 None:intergenic 50.0%
GGCGTAGCGTTATGAGATAG+CGG + Chr7:3336069-3336088 MsG0780036139.01.T01:intron 50.0%
GGTGTCTGTTCGAGACTTGT+TGG + Chr7:3332950-3332969 MsG0780036139.01.T01:intron 50.0%
TAGAAAGGGGCTCGTCCATT+TGG + Chr7:3335500-3335519 MsG0780036139.01.T01:intron 50.0%
TAGCATCAGCCAAGCAGACA+GGG - Chr7:3337452-3337471 None:intergenic 50.0%
TGACGGTGATCCTGAACTTC+TGG + Chr7:3338114-3338133 MsG0780036139.01.T01:CDS 50.0%
TGCAGCCTCATAATCACGGT+TGG + Chr7:3339791-3339810 MsG0780036139.01.T01:exon 50.0%
TGGCTTATTGCATAGCGGTC+CGG - Chr7:3336048-3336067 None:intergenic 50.0%
TGTGGTTGACCCCACTTAGT+GGG + Chr7:3332580-3332599 MsG0780036139.01.T01:intron 50.0%
TTACGATCCTCGCAAAGGCA+TGG - Chr7:3339089-3339108 None:intergenic 50.0%
! ATGAGATAGCGGCGCAATAG+CGG + Chr7:3336080-3336099 MsG0780036139.01.T01:intron 50.0%
! TGATGATAGCGAGTTGGAGG+AGG + Chr7:3331795-3331814 MsG0780036139.01.T01:CDS 50.0%
!! ACCGGTGCTGCTGCAATTAA+AGG + Chr7:3337550-3337569 MsG0780036139.01.T01:CDS 50.0%
!! ATGTATGTAGCTCTGGCCTC+TGG - Chr7:3332892-3332911 None:intergenic 50.0%
!! GCAACCTCATGCGTTGGTTT+CGG + Chr7:3332713-3332732 MsG0780036139.01.T01:intron 50.0%
!!! TGTTTTGACTGAAGGCCCTC+TGG + Chr7:3334077-3334096 MsG0780036139.01.T01:intron 50.0%
ACCGGCAAATCTTCCTCCCA+TGG + Chr7:3339716-3339735 MsG0780036139.01.T01:CDS 55.0%
AGCGAGACGAAGGGCAAGTT+TGG - Chr7:3335856-3335875 None:intergenic 55.0%
CACCTAACACGGGAAAGGGA+GGG - Chr7:3338891-3338910 None:intergenic 55.0%
CCACCATGACAAGGCAAGGA+AGG - Chr7:3333129-3333148 None:intergenic 55.0%
CCTTCCTTGCCTTGTCATGG+TGG + Chr7:3333126-3333145 MsG0780036139.01.T01:intron 55.0%
CGTGCGTATCCGTGCTTCAT+AGG + Chr7:3332352-3332371 MsG0780036139.01.T01:intron 55.0%
CTTATGTCTCCAGGTTGCCG+AGG + Chr7:3337848-3337867 MsG0780036139.01.T01:intron 55.0%
GAGGAGGAAGAGGAGGAAGA+TGG + Chr7:3331817-3331836 MsG0780036139.01.T01:CDS 55.0%
GATGGGGGACAAGAGGAAAG+TGG + Chr7:3331871-3331890 MsG0780036139.01.T01:CDS 55.0%
GCACGGACACTCTTCGGATT+AGG + Chr7:3332203-3332222 MsG0780036139.01.T01:intron 55.0%
GCCATGGGAGGAAGATTTGC+CGG - Chr7:3339720-3339739 None:intergenic 55.0%
GCGTATCCGTGCTTCATAGG+TGG + Chr7:3332355-3332374 MsG0780036139.01.T01:intron 55.0%
GCTCAGGAGACACATGCTGA+CGG + Chr7:3338097-3338116 MsG0780036139.01.T01:intron 55.0%
GGAAGAGGAGGAAGATGGAG+AGG + Chr7:3331822-3331841 MsG0780036139.01.T01:CDS 55.0%
GGAGGAAGATGGAGAGGATG+AGG + Chr7:3331828-3331847 MsG0780036139.01.T01:CDS 55.0%
GGGGACAAGAGGAAAGTGGA+TGG + Chr7:3331875-3331894 MsG0780036139.01.T01:CDS 55.0%
GTGTCCGAAACCAACGCATG+AGG - Chr7:3332720-3332739 None:intergenic 55.0%
TAACACGGGAAAGGGAGGGA+GGG - Chr7:3338887-3338906 None:intergenic 55.0%
TCACCTAACACGGGAAAGGG+AGG - Chr7:3338892-3338911 None:intergenic 55.0%
TCCTAGGCGTGTCCTGATGT+CGG + Chr7:3332230-3332249 MsG0780036139.01.T01:intron 55.0%
! ATCCTCGCAAAGGCATGGTG+GGG - Chr7:3339084-3339103 None:intergenic 55.0%
! CTTCGGATTAGGCGTGTCCT+AGG + Chr7:3332214-3332233 MsG0780036139.01.T01:intron 55.0%
! GATCCTCGCAAAGGCATGGT+GGG - Chr7:3339085-3339104 None:intergenic 55.0%
! TGATAGCGAGTTGGAGGAGG+AGG + Chr7:3331798-3331817 MsG0780036139.01.T01:CDS 55.0%
!! AATAGCATTGGCGCCATGGG+AGG - Chr7:3339732-3339751 None:intergenic 55.0%
CACGACACGTGTCCGACATC+AGG - Chr7:3332245-3332264 None:intergenic 60.0%
CTAACACGGGAAAGGGAGGG+AGG - Chr7:3338888-3338907 None:intergenic 60.0%
CTCCCTCCCTTTCCCGTGTT+AGG + Chr7:3338886-3338905 MsG0780036139.01.T01:intron 60.0%
GCTCCCACCATGACAAGGCA+AGG - Chr7:3333133-3333152 None:intergenic 60.0%
GGAGGAAGATTTGCCGGTCG+AGG - Chr7:3339714-3339733 None:intergenic 60.0%
GGCGCTATAGCGGCCAATAG+CGG + Chr7:3336002-3336021 MsG0780036139.01.T01:intron 60.0%
GTTGGAGGAGGAGGAGGAAG+AGG + Chr7:3331807-3331826 MsG0780036139.01.T01:CDS 60.0%
TCCGACATCAGGACACGCCT+AGG - Chr7:3332234-3332253 None:intergenic 60.0%
TTCCCCACCATGCCTTTGCG+AGG + Chr7:3339079-3339098 MsG0780036139.01.T01:intron 60.0%
! CGATCCTCGCAAAGGCATGG+TGG - Chr7:3339086-3339105 None:intergenic 60.0%
! TAGCGAGTTGGAGGAGGAGG+AGG + Chr7:3331801-3331820 MsG0780036139.01.T01:CDS 60.0%
GAGGCGTGGCTGCAACGGAA+GGG - Chr7:3331483-3331502 None:intergenic 65.0%
GCGGCCGCAACACTGCATAG+CGG + Chr7:3336099-3336118 MsG0780036139.01.T01:intron 65.0%
GGAGGAGGAGGAGGAAGAGG+AGG + Chr7:3331810-3331829 MsG0780036139.01.T01:CDS 65.0%
TCACTGGCACGGTAGGCACG+TGG + Chr7:3338980-3338999 MsG0780036139.01.T01:intron 65.0%
! ACGGAGAGGCGTGGCTGCAA+CGG - Chr7:3331488-3331507 None:intergenic 65.0%
! AGAGGCGTGGCTGCAACGGA+AGG - Chr7:3331484-3331503 None:intergenic 65.0%
! TAGCGGATAGCGGCGCGTAG+CGG - Chr7:3336740-3336759 None:intergenic 65.0%
CACGGGAAAGGGAGGGAGGG+AGG - Chr7:3338884-3338903 None:intergenic 70.0%
AGCGGCCAATAGCGGCCGCG+CGG + Chr7:3336010-3336029 MsG0780036139.01.T01:intron 75.0%
CCAATAGCGGCCGCGCGGTG+CGG + Chr7:3336015-3336034 MsG0780036139.01.T01:intron 75.0%
! CCGCACCGCGCGGCCGCTAT+TGG - Chr7:3336018-3336037 None:intergenic 80.0%
! CGCGCGGTGCGGTGCGGTAC+CGG + Chr7:3336026-3336045 MsG0780036139.01.T01:intron 80.0%
! CGGTACCGCACCGCACCGCG+CGG - Chr7:3336028-3336047 None:intergenic 80.0%
! AGCGGCCGCGCGGTGCGGTG+CGG + Chr7:3336020-3336039 MsG0780036139.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr7 gene 3331476 3340179 3331476 ID=MsG0780036139.01;Name=MsG0780036139.01
Chr7 mRNA 3331476 3340179 3331476 ID=MsG0780036139.01.T01;Parent=MsG0780036139.01;Name=MsG0780036139.01.T01;_AED=0.41;_eAED=0.41;_QI=124|0.90|1|1|1|1|12|376|379
Chr7 exon 3331476 3331698 3331476 ID=MsG0780036139.01.T01:exon:1992;Parent=MsG0780036139.01.T01
Chr7 exon 3331790 3331962 3331790 ID=MsG0780036139.01.T01:exon:1993;Parent=MsG0780036139.01.T01
Chr7 exon 3333760 3333832 3333760 ID=MsG0780036139.01.T01:exon:1994;Parent=MsG0780036139.01.T01
Chr7 exon 3334255 3334365 3334255 ID=MsG0780036139.01.T01:exon:1995;Parent=MsG0780036139.01.T01
Chr7 exon 3334939 3334981 3334939 ID=MsG0780036139.01.T01:exon:1996;Parent=MsG0780036139.01.T01
Chr7 exon 3337036 3337129 3337036 ID=MsG0780036139.01.T01:exon:1997;Parent=MsG0780036139.01.T01
Chr7 exon 3337492 3337594 3337492 ID=MsG0780036139.01.T01:exon:1998;Parent=MsG0780036139.01.T01
Chr7 exon 3337675 3337770 3337675 ID=MsG0780036139.01.T01:exon:1999;Parent=MsG0780036139.01.T01
Chr7 exon 3337861 3337893 3337861 ID=MsG0780036139.01.T01:exon:2000;Parent=MsG0780036139.01.T01
Chr7 exon 3338103 3338202 3338103 ID=MsG0780036139.01.T01:exon:2001;Parent=MsG0780036139.01.T01
Chr7 exon 3339492 3339576 3339492 ID=MsG0780036139.01.T01:exon:2002;Parent=MsG0780036139.01.T01
Chr7 exon 3339674 3340179 3339674 ID=MsG0780036139.01.T01:exon:2003;Parent=MsG0780036139.01.T01
Chr7 five_prime_UTR 3331476 3331599 3331476 ID=MsG0780036139.01.T01:five_prime_utr;Parent=MsG0780036139.01.T01
Chr7 CDS 3331600 3331698 3331600 ID=MsG0780036139.01.T01:cds;Parent=MsG0780036139.01.T01
Chr7 CDS 3331790 3331962 3331790 ID=MsG0780036139.01.T01:cds;Parent=MsG0780036139.01.T01
Chr7 CDS 3333760 3333832 3333760 ID=MsG0780036139.01.T01:cds;Parent=MsG0780036139.01.T01
Chr7 CDS 3334255 3334365 3334255 ID=MsG0780036139.01.T01:cds;Parent=MsG0780036139.01.T01
Chr7 CDS 3334939 3334981 3334939 ID=MsG0780036139.01.T01:cds;Parent=MsG0780036139.01.T01
Chr7 CDS 3337036 3337129 3337036 ID=MsG0780036139.01.T01:cds;Parent=MsG0780036139.01.T01
Chr7 CDS 3337492 3337594 3337492 ID=MsG0780036139.01.T01:cds;Parent=MsG0780036139.01.T01
Chr7 CDS 3337675 3337770 3337675 ID=MsG0780036139.01.T01:cds;Parent=MsG0780036139.01.T01
Chr7 CDS 3337861 3337893 3337861 ID=MsG0780036139.01.T01:cds;Parent=MsG0780036139.01.T01
Chr7 CDS 3338103 3338202 3338103 ID=MsG0780036139.01.T01:cds;Parent=MsG0780036139.01.T01
Chr7 CDS 3339492 3339576 3339492 ID=MsG0780036139.01.T01:cds;Parent=MsG0780036139.01.T01
Chr7 CDS 3339674 3339803 3339674 ID=MsG0780036139.01.T01:cds;Parent=MsG0780036139.01.T01
Chr7 three_prime_UTR 3339804 3340179 3339804 ID=MsG0780036139.01.T01:three_prime_utr;Parent=MsG0780036139.01.T01
Gene Sequence

>MsG0780036139.01.T01

ATGGGTAGTAGTTCTGCAAAAAAATCTAAAAAAATGCAAAAAAGTGACAGTGATTTCGATGAATACGATGATAATGATGATGATATGTCCTATAACGAGGTAAATGATGATAGCGAGTTGGAGGAGGAGGAGGAAGAGGAGGAAGATGGAGAGGATGAGGGAAGTGATGAGGAAGAAGAAGATGGGGGACAAGAGGAAAGTGGATGGAAAGATGATGAAATGGAACAACTTGAGAAAGAGTATAGGGATCTTCATCACCAAGAACAGGAGCTAAATACTTTGAAGAACTTGAAGCATCATAAGGATGAAGATCTCCTGAAAGGGCAAGCTGTGAAAAGCCAGAAGGAATCAATAAAAGAATCATTTTGTGAATCAGACGAGACAGTTAGAGGCGCATATGAAGATTTGATAACTTCTTCCAAGGAAACTTTGGATTCTATATTGGAACTTCAAGAGGCTCTGATTGCAAAGAATCCATCAGTTGCTCAAGCCAGTAATGGTTCAGAAAGGTCATCAAAAGATTTAGAAGTTTCTAACAATTTGGATGACAATCTTGATCAAGAGTGGTCACAGATTTCTCGGATGCACAACAGTATGGCAACTTTCAGGGACAAGTCAATCAACAAATGGCAGAGGATGACACAAGTGACAACCGGTGCTGCTGCAATTAAAGGAAAATTACATGCTTTTAATCAGGATATCAGCCATCAAGTTGCCGCTTATATGAGAGATCCCAGTAGAATGATTAAGCAGATGCAACTGAGAAGATCAGCTATTAAAATATTCGGATCAGTTGCCGAGGTTAATGATAGCTCTAATGAACCGGAGACACATGCTGACGGTGATCCTGAACTTCTGGACGATTCTGAATTTTATCAGCAATTATTGAAAGAATTTTTTGAGACAATTGATCCTTCATCATCAGAGAAAGCATTCTATGCTTTGAAAAGAATGCAAACCAAAAAAAGAAAAATTGTTGATCGCCGTGCCTCAAAAAGTCGTAAGATAAGGTACAATGTCCATGAAAAGATAGTAAACTTTATGGCTCCTCGACCGGCAAATCTTCCTCCCATGGCGCCAATGCTATTTGATGATCTGTTTGGATTGAAGACTCAAAGATCATCTGCTGCAGCCTCATAA
Protein sequence

>MsG0780036139.01.T01

MGSSSAKKSKKMQKSDSDFDEYDDNDDDMSYNEVNDDSELEEEEEEEEDGEDEGSDEEEEDGGQEESGWKDDEMEQLEKEYRDLHHQEQELNTLKNLKHHKDEDLLKGQAVKSQKESIKESFCESDETVRGAYEDLITSSKETLDSILELQEALIAKNPSVAQASNGSERSSKDLEVSNNLDDNLDQEWSQISRMHNSMATFRDKSINKWQRMTQVTTGAAAIKGKLHAFNQDISHQVAAYMRDPSRMIKQMQLRRSAIKIFGSVAEVNDSSNEPETHADGDPELLDDSEFYQQLLKEFFETIDPSSSEKAFYALKRMQTKKRKIVDRRASKSRKIRYNVHEKIVNFMAPRPANLPPMAPMLFDDLFGLKTQRSSAAAS*