Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039841.01.T01 | XP_003624196.1 | 97.647 | 170 | 2 | 1 | 1 | 168 | 1 | 170 | 6.15E-118 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039841.01.T01 | G7KRK5 | 97.647 | 170 | 2 | 1 | 1 | 168 | 1 | 170 | 2.94e-118 | 340 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048197.01 | MsG0780039841.01 | 0.823621 | 1.255172e-53 | 1.086392e-50 |
| MsG0080048656.01 | MsG0780039841.01 | 0.803686 | 3.096503e-49 | 1.566010e-46 |
| MsG0080049013.01 | MsG0780039841.01 | -0.816160 | 6.382511e-52 | 4.488222e-49 |
| MsG0080049052.01 | MsG0780039841.01 | 0.804070 | 2.576902e-49 | 1.316219e-46 |
| MsG0080049059.01 | MsG0780039841.01 | 0.837108 | 6.314470e-57 | 8.119553e-54 |
| MsG0180000152.01 | MsG0780039841.01 | 0.805427 | 1.342149e-49 | 7.098630e-47 |
| MsG0180000550.01 | MsG0780039841.01 | 0.822393 | 2.426972e-53 | 2.028901e-50 |
| MsG0180000614.01 | MsG0780039841.01 | 0.812126 | 4.960440e-51 | 3.127463e-48 |
| MsG0180000669.01 | MsG0780039841.01 | 0.813309 | 2.731590e-51 | 1.777604e-48 |
| MsG0180000673.01 | MsG0780039841.01 | 0.817204 | 3.722832e-52 | 2.693805e-49 |
| MsG0180000679.01 | MsG0780039841.01 | 0.840456 | 8.601317e-58 | 1.225896e-54 |
| MsG0180001043.01 | MsG0780039841.01 | 0.832324 | 1.008588e-55 | 1.123387e-52 |
| MsG0180001213.01 | MsG0780039841.01 | 0.828906 | 6.929732e-55 | 6.981651e-52 |
| MsG0180001522.01 | MsG0780039841.01 | 0.851256 | 9.992275e-61 | 2.010615e-57 |
| MsG0180001551.01 | MsG0780039841.01 | 0.802633 | 5.114026e-49 | 2.517577e-46 |
| MsG0180001795.01 | MsG0780039841.01 | 0.894589 | 2.139719e-75 | 2.140845e-71 |
| MsG0180002482.01 | MsG0780039841.01 | 0.843309 | 1.517075e-58 | 2.364201e-55 |
| MsG0180002489.01 | MsG0780039841.01 | 0.849098 | 4.020567e-60 | 7.539117e-57 |
| MsG0180002491.01 | MsG0780039841.01 | 0.849612 | 2.891685e-60 | 5.513107e-57 |
| MsG0180002912.01 | MsG0780039841.01 | 0.802919 | 4.464449e-49 | 2.213881e-46 |
| MsG0180002940.01 | MsG0780039841.01 | -0.809595 | 1.750586e-50 | 1.032175e-47 |
| MsG0180003088.01 | MsG0780039841.01 | 0.877224 | 7.457145e-69 | 3.721251e-65 |
| MsG0180003128.01 | MsG0780039841.01 | 0.833778 | 4.386454e-56 | 5.103336e-53 |
| MsG0180003129.01 | MsG0780039841.01 | 0.813682 | 2.261531e-51 | 1.486715e-48 |
| MsG0180003257.01 | MsG0780039841.01 | 0.811465 | 6.906261e-51 | 4.278125e-48 |
| MsG0180003302.01 | MsG0780039841.01 | 0.805897 | 1.069111e-49 | 5.723384e-47 |
| MsG0180003409.01 | MsG0780039841.01 | 0.832318 | 1.012003e-55 | 1.126978e-52 |
| MsG0180003864.01 | MsG0780039841.01 | 0.807279 | 5.462152e-50 | 3.029868e-47 |
| MsG0180004566.01 | MsG0780039841.01 | 0.855560 | 5.810967e-62 | 1.347037e-58 |
| MsG0180004886.01 | MsG0780039841.01 | -0.824825 | 6.544521e-54 | 5.862091e-51 |
| MsG0180005125.01 | MsG0780039841.01 | 0.811399 | 7.139353e-51 | 4.414863e-48 |
| MsG0180005371.01 | MsG0780039841.01 | 0.814800 | 1.281145e-51 | 8.680736e-49 |
| MsG0180005851.01 | MsG0780039841.01 | 0.827147 | 1.836798e-54 | 1.758211e-51 |
| MsG0180005872.01 | MsG0780039841.01 | 0.804866 | 1.758554e-49 | 9.168591e-47 |
| MsG0180006013.01 | MsG0780039841.01 | 0.822405 | 2.410346e-53 | 2.015745e-50 |
| MsG0180006016.01 | MsG0780039841.01 | 0.822429 | 2.380022e-53 | 1.991682e-50 |
| MsG0180006069.01 | MsG0780039841.01 | 0.859010 | 5.557978e-63 | 1.446402e-59 |
| MsG0180006097.01 | MsG0780039841.01 | 0.809592 | 1.753860e-50 | 1.034000e-47 |
| MsG0180006220.01 | MsG0780039841.01 | 0.813163 | 2.940965e-51 | 1.906111e-48 |
| MsG0280006406.01 | MsG0780039841.01 | 0.808585 | 2.881223e-50 | 1.653707e-47 |
| MsG0280006411.01 | MsG0780039841.01 | 0.864552 | 1.120394e-64 | 3.531554e-61 |
| MsG0280011120.01 | MsG0780039841.01 | -0.811346 | 7.330659e-51 | 4.526424e-48 |
| MsG0280011446.01 | MsG0780039841.01 | 0.812634 | 3.840482e-51 | 2.454557e-48 |
| MsG0380012661.01 | MsG0780039841.01 | -0.849200 | 3.766283e-60 | 7.086381e-57 |
| MsG0380013507.01 | MsG0780039841.01 | 0.824896 | 6.294234e-54 | 5.649731e-51 |
| MsG0380013541.01 | MsG0780039841.01 | 0.864188 | 1.455544e-64 | 4.529956e-61 |
| MsG0380014330.01 | MsG0780039841.01 | 0.809327 | 1.998791e-50 | 1.170100e-47 |
| MsG0380014647.01 | MsG0780039841.01 | 0.809972 | 1.453034e-50 | 8.652455e-48 |
| MsG0680031243.01 | MsG0780039841.01 | 0.818249 | 2.163394e-52 | 1.610860e-49 |
| MsG0680031651.01 | MsG0780039841.01 | 0.807842 | 4.148236e-50 | 2.334880e-47 |
| MsG0680031694.01 | MsG0780039841.01 | 0.816842 | 4.488307e-52 | 3.215805e-49 |
| MsG0680032430.01 | MsG0780039841.01 | 0.894805 | 1.744971e-75 | 1.762333e-71 |
| MsG0680033391.01 | MsG0780039841.01 | 0.816566 | 5.178063e-52 | 3.681887e-49 |
| MsG0680034061.01 | MsG0780039841.01 | 0.818718 | 1.693891e-52 | 1.277735e-49 |
| MsG0680034450.01 | MsG0780039841.01 | 0.801302 | 9.598559e-49 | 4.568328e-46 |
| MsG0680035582.01 | MsG0780039841.01 | 0.839302 | 1.718622e-57 | 2.363454e-54 |
| MsG0480018571.01 | MsG0780039841.01 | 0.802938 | 4.423659e-49 | 2.194658e-46 |
| MsG0480018603.01 | MsG0780039841.01 | 0.814280 | 1.669713e-51 | 1.115584e-48 |
| MsG0480018906.01 | MsG0780039841.01 | 0.848996 | 4.290901e-60 | 8.019356e-57 |
| MsG0480018970.01 | MsG0780039841.01 | 0.803909 | 2.783305e-49 | 1.415807e-46 |
| MsG0480019486.01 | MsG0780039841.01 | 0.803892 | 2.805535e-49 | 1.426495e-46 |
| MsG0480020065.01 | MsG0780039841.01 | 0.825718 | 4.024189e-54 | 3.697335e-51 |
| MsG0480020090.01 | MsG0780039841.01 | 0.823699 | 1.203604e-53 | 1.044184e-50 |
| MsG0480020372.01 | MsG0780039841.01 | 0.839088 | 1.952979e-57 | 2.668174e-54 |
| MsG0480020445.01 | MsG0780039841.01 | 0.831317 | 1.787585e-55 | 1.932848e-52 |
| MsG0480020843.01 | MsG0780039841.01 | 0.808545 | 2.938550e-50 | 1.684894e-47 |
| MsG0480021246.01 | MsG0780039841.01 | 0.800167 | 1.636398e-48 | 7.566998e-46 |
| MsG0480021249.01 | MsG0780039841.01 | 0.839242 | 1.781821e-57 | 2.445853e-54 |
| MsG0480021251.01 | MsG0780039841.01 | 0.825650 | 4.176442e-54 | 3.829778e-51 |
| MsG0480021448.01 | MsG0780039841.01 | 0.835340 | 1.776603e-56 | 2.166355e-53 |
| MsG0480021453.01 | MsG0780039841.01 | 0.804479 | 2.117674e-49 | 1.093012e-46 |
| MsG0480021464.01 | MsG0780039841.01 | 0.813831 | 2.097553e-51 | 1.384425e-48 |
| MsG0480021731.01 | MsG0780039841.01 | 0.849018 | 4.233423e-60 | 7.917875e-57 |
| MsG0480021883.01 | MsG0780039841.01 | 0.803821 | 2.902717e-49 | 1.473138e-46 |
| MsG0480021994.01 | MsG0780039841.01 | 0.825333 | 4.962267e-54 | 4.509737e-51 |
| MsG0480022052.01 | MsG0780039841.01 | -0.802861 | 4.588889e-49 | 2.272220e-46 |
| MsG0480022183.01 | MsG0780039841.01 | 0.839737 | 1.325141e-57 | 1.846744e-54 |
| MsG0480022274.01 | MsG0780039841.01 | 0.862015 | 6.831917e-64 | 1.971185e-60 |
| MsG0480022480.01 | MsG0780039841.01 | 0.806326 | 8.686466e-50 | 4.701274e-47 |
| MsG0480022768.01 | MsG0780039841.01 | 0.838627 | 2.570083e-57 | 3.462468e-54 |
| MsG0480023088.01 | MsG0780039841.01 | 0.829330 | 5.468867e-55 | 5.580325e-52 |
| MsG0480023361.01 | MsG0780039841.01 | 0.810483 | 1.127028e-50 | 6.801602e-48 |
| MsG0480023707.01 | MsG0780039841.01 | 0.816249 | 6.095422e-52 | 4.296931e-49 |
| MsG0480023869.01 | MsG0780039841.01 | -0.838179 | 3.354122e-57 | 4.456515e-54 |
| MsG0580024458.01 | MsG0780039841.01 | -0.860510 | 1.964239e-63 | 5.382474e-60 |
| MsG0580024575.01 | MsG0780039841.01 | 0.813578 | 2.384772e-51 | 1.563286e-48 |
| MsG0580025134.01 | MsG0780039841.01 | 0.862005 | 6.881984e-64 | 1.984872e-60 |
| MsG0580025421.01 | MsG0780039841.01 | 0.804498 | 2.099175e-49 | 1.083958e-46 |
| MsG0380015027.01 | MsG0780039841.01 | 0.814983 | 1.166592e-51 | 7.943700e-49 |
| MsG0380015181.01 | MsG0780039841.01 | 0.822153 | 2.758034e-53 | 2.289709e-50 |
| MsG0380015212.01 | MsG0780039841.01 | -0.805390 | 1.366186e-49 | 7.218749e-47 |
| MsG0380015400.01 | MsG0780039841.01 | 0.851813 | 6.950072e-61 | 1.423619e-57 |
| MsG0380015404.01 | MsG0780039841.01 | 0.812708 | 3.699806e-51 | 2.369195e-48 |
| MsG0380015770.01 | MsG0780039841.01 | 0.812731 | 3.657343e-51 | 2.343492e-48 |
| MsG0380015779.01 | MsG0780039841.01 | 0.810389 | 1.181213e-50 | 7.110555e-48 |
| MsG0380015793.01 | MsG0780039841.01 | -0.802795 | 4.734047e-49 | 2.340282e-46 |
| MsG0380015822.01 | MsG0780039841.01 | 0.813594 | 2.365023e-51 | 1.551083e-48 |
| MsG0380017135.01 | MsG0780039841.01 | -0.835162 | 1.969802e-56 | 2.388885e-53 |
| MsG0380017226.01 | MsG0780039841.01 | 0.852057 | 5.926498e-61 | 1.223418e-57 |
| MsG0380017286.01 | MsG0780039841.01 | 0.835272 | 1.848498e-56 | 2.249413e-53 |
| MsG0380017915.01 | MsG0780039841.01 | 0.827126 | 1.858602e-54 | 1.777942e-51 |
| MsG0380017998.01 | MsG0780039841.01 | 0.858228 | 9.514459e-63 | 2.411066e-59 |
| MsG0380018001.01 | MsG0780039841.01 | 0.848701 | 5.181228e-60 | 9.590290e-57 |
| MsG0380018009.01 | MsG0780039841.01 | 0.814725 | 1.330940e-51 | 9.000074e-49 |
| MsG0480018187.01 | MsG0780039841.01 | 0.823706 | 1.198944e-53 | 1.040360e-50 |
| MsG0580027345.01 | MsG0780039841.01 | 0.830747 | 2.467841e-55 | 2.623782e-52 |
| MsG0580028185.01 | MsG0780039841.01 | 0.832808 | 7.650503e-56 | 8.645661e-53 |
| MsG0580029256.01 | MsG0780039841.01 | 0.834553 | 2.804119e-56 | 3.339462e-53 |
| MsG0580029668.01 | MsG0780039841.01 | -0.845660 | 3.536039e-59 | 5.935533e-56 |
| MsG0580029952.01 | MsG0780039841.01 | 0.819638 | 1.045449e-52 | 8.089906e-50 |
| MsG0580030095.01 | MsG0780039841.01 | -0.835070 | 2.077842e-56 | 2.512717e-53 |
| MsG0680030408.01 | MsG0780039841.01 | 0.801675 | 8.052522e-49 | 3.868524e-46 |
| MsG0280006544.01 | MsG0780039841.01 | 0.803603 | 3.222219e-49 | 1.626159e-46 |
| MsG0280006595.01 | MsG0780039841.01 | 0.810083 | 1.375070e-50 | 8.211659e-48 |
| MsG0280006596.01 | MsG0780039841.01 | 0.812871 | 3.408833e-51 | 2.192101e-48 |
| MsG0280006961.01 | MsG0780039841.01 | -0.812221 | 4.727588e-51 | 2.988514e-48 |
| MsG0280007479.01 | MsG0780039841.01 | 0.801622 | 8.256240e-49 | 3.961024e-46 |
| MsG0280007607.01 | MsG0780039841.01 | 0.824487 | 7.859569e-54 | 6.971471e-51 |
| MsG0280007609.01 | MsG0780039841.01 | 0.821804 | 3.322113e-53 | 2.730855e-50 |
| MsG0280007715.01 | MsG0780039841.01 | 0.842831 | 2.033362e-58 | 3.120875e-55 |
| MsG0280007915.01 | MsG0780039841.01 | 0.812959 | 3.260139e-51 | 2.101405e-48 |
| MsG0280008286.01 | MsG0780039841.01 | 0.824230 | 9.032655e-54 | 7.953372e-51 |
| MsG0280008971.01 | MsG0780039841.01 | 0.817967 | 2.505437e-52 | 1.851156e-49 |
| MsG0280009109.01 | MsG0780039841.01 | 0.862816 | 3.875710e-64 | 1.150368e-60 |
| MsG0280009140.01 | MsG0780039841.01 | 0.837656 | 4.570138e-57 | 5.977221e-54 |
| MsG0280010204.01 | MsG0780039841.01 | 0.825933 | 3.577720e-54 | 3.307544e-51 |
| MsG0280010389.01 | MsG0780039841.01 | 0.816663 | 4.923136e-52 | 3.510073e-49 |
| MsG0680035659.01 | MsG0780039841.01 | 0.838769 | 2.361393e-57 | 3.194991e-54 |
| MsG0680035777.01 | MsG0780039841.01 | 0.852393 | 4.754905e-61 | 9.921139e-58 |
| MsG0780036139.01 | MsG0780039841.01 | 0.807266 | 5.497845e-50 | 3.048607e-47 |
| MsG0780036550.01 | MsG0780039841.01 | 0.802885 | 4.537204e-49 | 2.247986e-46 |
| MsG0780038444.01 | MsG0780039841.01 | 0.802724 | 4.898377e-49 | 2.417093e-46 |
| MsG0780038495.01 | MsG0780039841.01 | 0.830035 | 3.683619e-55 | 3.835865e-52 |
| MsG0780038645.01 | MsG0780039841.01 | 0.852227 | 5.302292e-61 | 1.100507e-57 |
| MsG0780039452.01 | MsG0780039841.01 | 0.811986 | 5.319145e-51 | 3.340854e-48 |
| MsG0780039841.01 | MsG0780039985.01 | 0.817942 | 2.538485e-52 | 1.874314e-49 |
| MsG0780039841.01 | MsG0780040442.01 | 0.826990 | 2.003215e-54 | 1.908738e-51 |
| MsG0780039841.01 | MsG0780040858.01 | 0.815147 | 1.072938e-51 | 7.338161e-49 |
| MsG0780039841.01 | MsG0780040861.01 | 0.878029 | 3.906854e-69 | 2.008126e-65 |
| MsG0780039841.01 | MsG0780041294.01 | 0.825864 | 3.714903e-54 | 3.427661e-51 |
| MsG0780039841.01 | MsG0780041295.01 | 0.822303 | 2.545816e-53 | 2.122729e-50 |
| MsG0780039841.01 | MsG0780041357.01 | 0.817452 | 3.273728e-52 | 2.385146e-49 |
| MsG0780039841.01 | MsG0780041399.01 | 0.800385 | 1.477555e-48 | 6.870734e-46 |
| MsG0780039841.01 | MsG0880041969.01 | 0.804935 | 1.700899e-49 | 8.883695e-47 |
| MsG0780039841.01 | MsG0880042294.01 | 0.838455 | 2.846818e-57 | 3.815180e-54 |
| MsG0780039841.01 | MsG0880042811.01 | 0.812481 | 4.149367e-51 | 2.641326e-48 |
| MsG0780039841.01 | MsG0880043002.01 | 0.841279 | 5.233853e-58 | 7.651634e-55 |
| MsG0780039841.01 | MsG0880043003.01 | 0.836585 | 8.585762e-57 | 1.086693e-53 |
| MsG0780039841.01 | MsG0880043082.01 | 0.842989 | 1.846418e-58 | 2.847841e-55 |
| MsG0780039841.01 | MsG0880043303.01 | 0.847690 | 9.859279e-60 | 1.766708e-56 |
| MsG0780039841.01 | MsG0880043456.01 | 0.815243 | 1.021712e-51 | 7.006039e-49 |
| MsG0780039841.01 | MsG0880043465.01 | 0.857978 | 1.129261e-62 | 2.838183e-59 |
| MsG0780039841.01 | MsG0880044062.01 | -0.800997 | 1.108339e-48 | 5.234838e-46 |
| MsG0780039841.01 | MsG0880045290.01 | 0.805895 | 1.070289e-49 | 5.729286e-47 |
| MsG0780039841.01 | MsG0880045631.01 | 0.811406 | 7.114388e-51 | 4.400244e-48 |
| MsG0780039841.01 | MsG0880045653.01 | 0.800872 | 1.175289e-48 | 5.533206e-46 |
| MsG0780039841.01 | MsG0880046058.01 | 0.847599 | 1.044339e-59 | 1.865824e-56 |
| MsG0780039841.01 | MsG0880046088.01 | 0.836764 | 7.727461e-57 | 9.834548e-54 |
| MsG0780039841.01 | MsG0880046126.01 | 0.828105 | 1.081846e-54 | 1.064966e-51 |
| MsG0780039841.01 | MsG0880046177.01 | 0.801743 | 7.797880e-49 | 3.752604e-46 |
| MsG0780039841.01 | MsG0880046285.01 | 0.829222 | 5.808431e-55 | 5.907736e-52 |
| MsG0780039841.01 | MsG0880046328.01 | 0.819313 | 1.240399e-52 | 9.511191e-50 |
| MsG0780039841.01 | MsG0880046733.01 | 0.813123 | 3.001463e-51 | 1.943180e-48 |
| MsG0780039841.01 | MsG0880046933.01 | 0.822927 | 1.823194e-53 | 1.547353e-50 |
| MsG0780039841.01 | MsG0880047116.01 | 0.848078 | 7.706930e-60 | 1.397739e-56 |
| MsG0780039841.01 | MsG0880047143.01 | 0.806286 | 8.854198e-50 | 4.787327e-47 |
| MsG0780039841.01 | MsG0880047191.01 | 0.845664 | 3.527964e-59 | 5.922562e-56 |
| MsG0780039841.01 | MsG0880047360.01 | -0.836108 | 1.135061e-56 | 1.416338e-53 |
| MsG0780039841.01 | MsG0880047448.01 | 0.846180 | 2.553176e-59 | 4.357764e-56 |
| MsG0780039841.01 | MsG0880047607.01 | 0.830560 | 2.741341e-55 | 2.898440e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039841.01.T01 | MTR_7g080280 | 97.647 | 170 | 2 | 1 | 1 | 168 | 1 | 170 | 7.45e-122 | 340 |
| MsG0780039841.01.T01 | MTR_7g053107 | 60.526 | 114 | 44 | 1 | 39 | 152 | 36 | 148 | 3.78e-47 | 152 |
| MsG0780039841.01.T01 | MTR_2g010970 | 44.961 | 129 | 70 | 1 | 27 | 155 | 16 | 143 | 5.43e-36 | 122 |
| MsG0780039841.01.T01 | MTR_4g081560 | 48.718 | 117 | 59 | 1 | 39 | 155 | 29 | 144 | 1.24e-35 | 122 |
| MsG0780039841.01.T01 | MTR_4g091980 | 37.857 | 140 | 80 | 2 | 14 | 153 | 12 | 144 | 3.69e-29 | 105 |
| MsG0780039841.01.T01 | MTR_4g091970 | 34.416 | 154 | 95 | 1 | 3 | 156 | 1 | 148 | 6.28e-29 | 105 |
| MsG0780039841.01.T01 | MTR_4g091930 | 35.374 | 147 | 92 | 2 | 7 | 153 | 1 | 144 | 9.63e-28 | 101 |
| MsG0780039841.01.T01 | MTR_8g085590 | 40.650 | 123 | 70 | 3 | 39 | 160 | 31 | 151 | 2.29e-26 | 98.2 |
| MsG0780039841.01.T01 | MTR_4g064460 | 37.500 | 120 | 74 | 1 | 34 | 153 | 26 | 144 | 1.27e-25 | 96.7 |
| MsG0780039841.01.T01 | MTR_8g085580 | 38.710 | 124 | 75 | 1 | 30 | 153 | 21 | 143 | 1.41e-25 | 96.7 |
| MsG0780039841.01.T01 | MTR_2g010970 | 40.777 | 103 | 60 | 1 | 27 | 129 | 16 | 117 | 2.12e-23 | 89.7 |
| MsG0780039841.01.T01 | MTR_7g108775 | 29.655 | 145 | 97 | 3 | 16 | 159 | 9 | 149 | 2.22e-17 | 75.1 |
| MsG0780039841.01.T01 | MTR_7g108775 | 29.655 | 145 | 97 | 3 | 16 | 159 | 9 | 149 | 3.56e-17 | 75.1 |
| MsG0780039841.01.T01 | MTR_1g088250 | 29.032 | 124 | 83 | 2 | 38 | 159 | 23 | 143 | 1.24e-14 | 67.8 |
| MsG0780039841.01.T01 | MTR_1g088260 | 29.752 | 121 | 77 | 4 | 47 | 165 | 4 | 118 | 4.87e-13 | 62.8 |
| MsG0780039841.01.T01 | MTR_6g086680 | 35.345 | 116 | 66 | 4 | 42 | 152 | 38 | 149 | 6.91e-12 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039841.01.T01 | AT3G07470 | 50.685 | 146 | 64 | 1 | 17 | 154 | 1 | 146 | 3.45e-52 | 164 |
| MsG0780039841.01.T01 | AT3G07470 | 50.685 | 146 | 64 | 1 | 17 | 154 | 1 | 146 | 4.09e-52 | 164 |
| MsG0780039841.01.T01 | AT3G07470 | 50.685 | 146 | 64 | 1 | 17 | 154 | 1 | 146 | 7.18e-52 | 163 |
| MsG0780039841.01.T01 | AT3G07460 | 50.350 | 143 | 63 | 2 | 18 | 152 | 1 | 143 | 1.16e-48 | 155 |
| MsG0780039841.01.T01 | AT3G07460 | 50.350 | 143 | 63 | 2 | 18 | 152 | 1 | 143 | 9.00e-47 | 154 |
| MsG0780039841.01.T01 | AT5G16380 | 53.623 | 138 | 64 | 0 | 16 | 153 | 8 | 145 | 3.47e-46 | 150 |
| MsG0780039841.01.T01 | AT1G61667 | 52.800 | 125 | 59 | 0 | 30 | 154 | 13 | 137 | 4.55e-43 | 140 |
| MsG0780039841.01.T01 | AT1G61667 | 52.800 | 125 | 59 | 0 | 30 | 154 | 49 | 173 | 8.43e-43 | 141 |
| MsG0780039841.01.T01 | AT5G54530 | 50.000 | 118 | 58 | 1 | 38 | 155 | 28 | 144 | 2.84e-38 | 129 |
| MsG0780039841.01.T01 | AT5G19860 | 37.607 | 117 | 72 | 1 | 37 | 153 | 34 | 149 | 1.93e-22 | 89.0 |
| MsG0780039841.01.T01 | AT1G55265 | 38.793 | 116 | 68 | 3 | 39 | 153 | 54 | 167 | 1.94e-21 | 86.3 |
| MsG0780039841.01.T01 | AT4G02360 | 30.137 | 146 | 94 | 3 | 16 | 160 | 10 | 148 | 1.53e-20 | 83.2 |
| MsG0780039841.01.T01 | AT1G02813 | 31.159 | 138 | 86 | 3 | 16 | 152 | 7 | 136 | 8.39e-17 | 73.2 |
| MsG0780039841.01.T01 | AT4G02370 | 29.600 | 125 | 81 | 3 | 31 | 152 | 24 | 144 | 1.21e-16 | 73.6 |
| MsG0780039841.01.T01 | AT1G02816 | 25.850 | 147 | 104 | 2 | 16 | 160 | 9 | 152 | 1.17e-15 | 70.9 |
| MsG0780039841.01.T01 | AT2G03350 | 29.457 | 129 | 87 | 3 | 26 | 152 | 46 | 172 | 6.51e-12 | 61.2 |
Find 78 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGCATGTTGCTGCATTTC+AGG | 0.103005 | 7:-69621566 | MsG0780039841.01.T01:three_prime_UTR |
| CAACCATATACGACGAATTA+AGG | 0.178810 | 7:-69623250 | MsG0780039841.01.T01:CDS |
| TCACTATGATCCTAATATTA+AGG | 0.212709 | 7:-69623105 | MsG0780039841.01.T01:CDS |
| GTTCTTATGGTTTCCTGTTA+AGG | 0.253897 | 7:-69623027 | MsG0780039841.01.T01:CDS |
| CTGCTCAGGAACTGTTCTTA+TGG | 0.260029 | 7:-69623040 | MsG0780039841.01.T01:CDS |
| TGCCCTTAATTCGTCGTATA+TGG | 0.271684 | 7:+69623247 | None:intergenic |
| GGGACAAAGGATGACAATTT+TGG | 0.285046 | 7:-69621424 | MsG0780039841.01.T01:three_prime_UTR |
| TTCTTATGGTTTCCTGTTAA+GGG | 0.291646 | 7:-69623026 | MsG0780039841.01.T01:CDS |
| CTTGCCCTTTGGAGTAAATC+AGG | 0.319624 | 7:-69623424 | None:intergenic |
| CCAAGGGTACCCTTAATATT+AGG | 0.319867 | 7:+69623095 | None:intergenic |
| GGCAAGATCAAAGGATTATC+TGG | 0.347833 | 7:-69623068 | MsG0780039841.01.T01:CDS |
| ATTAAGGGTACCCTTGGTTA+TGG | 0.369525 | 7:-69623089 | MsG0780039841.01.T01:CDS |
| TCAACACGAATGCCCTTAAC+AGG | 0.369824 | 7:+69623014 | None:intergenic |
| ATTGAAAACTATAGGCAAAA+TGG | 0.379093 | 7:+69621117 | None:intergenic |
| TGGAACCAGTGGTGAATTCC+AGG | 0.379673 | 7:-69623171 | MsG0780039841.01.T01:CDS |
| TCATACTTCGTTATTCCCTT+TGG | 0.400855 | 7:+69623200 | None:intergenic |
| TTCTCGTTCTTACCGTTTCG+TGG | 0.422499 | 7:-69623304 | MsG0780039841.01.T01:CDS |
| TGGTTATGCACCTTCGCAAA+CGG | 0.434724 | 7:-69623284 | MsG0780039841.01.T01:CDS |
| CACTATGATCCTAATATTAA+GGG | 0.436502 | 7:-69623104 | MsG0780039841.01.T01:CDS |
| GGTCTCATTCACTTTGATGT+TGG | 0.437916 | 7:-69622978 | MsG0780039841.01.T01:CDS |
| GCTACATTGGCCTATGGTAT+TGG | 0.438275 | 7:-69621395 | MsG0780039841.01.T01:three_prime_UTR |
| AACCATATACGACGAATTAA+GGG | 0.439226 | 7:-69623249 | MsG0780039841.01.T01:CDS |
| CCTAATATTAAGGGTACCCT+TGG | 0.447732 | 7:-69623095 | MsG0780039841.01.T01:CDS |
| ATAAAAGAACAACGGGTACT+AGG | 0.448142 | 7:+69621163 | None:intergenic |
| AAAACCTCAGGGTTGCAATC+AGG | 0.450991 | 7:+69622912 | None:intergenic |
| TGGCAAAATCTGTGCTAGTC+AGG | 0.452845 | 7:-69621375 | MsG0780039841.01.T01:three_prime_UTR |
| ATGATGTGCTGAGGGCTGTT+TGG | 0.457407 | 7:-69621596 | MsG0780039841.01.T01:CDS |
| ATCTTAGCTGTGCTTGTGGT+TGG | 0.466973 | 7:-69621520 | MsG0780039841.01.T01:three_prime_UTR |
| AATTTCCATAAAAGAACAAC+GGG | 0.467209 | 7:+69621156 | None:intergenic |
| AAGCAAACATTGAAAACTAT+AGG | 0.469555 | 7:+69621109 | None:intergenic |
| CCCTGTTTAAAATTGTTTGT+TGG | 0.473073 | 7:-69621023 | MsG0780039841.01.T01:three_prime_UTR |
| CCCTTTGGTAGAAGCCCTAC+GGG | 0.493865 | 7:+69623215 | None:intergenic |
| TGGTTCAATTCATACTCAGT+GGG | 0.497283 | 7:-69621076 | MsG0780039841.01.T01:three_prime_UTR |
| TAGTGTTCTATATAATACTA+AGG | 0.505455 | 7:-69621325 | MsG0780039841.01.T01:three_prime_UTR |
| CTCTCAATGGCTATGGCTAG+TGG | 0.510825 | 7:-69623365 | MsG0780039841.01.T01:exon |
| CGTGTTGATCTACCTAGCTC+TGG | 0.512045 | 7:-69622999 | MsG0780039841.01.T01:CDS |
| AGAAGAAGATGAAAATTCGA+TGG | 0.513668 | 7:+69623329 | None:intergenic |
| CTTGGTTATGGCAAGATCAA+AGG | 0.516045 | 7:-69623077 | MsG0780039841.01.T01:CDS |
| TCCCTTTGGTAGAAGCCCTA+CGG | 0.517563 | 7:+69623214 | None:intergenic |
| TCTGTGCTAGTCAGGAATGT+TGG | 0.519710 | 7:-69621367 | MsG0780039841.01.T01:three_prime_UTR |
| TCCCGTAGGGCTTCTACCAA+AGG | 0.520926 | 7:-69623216 | MsG0780039841.01.T01:CDS |
| CCCGTAGGGCTTCTACCAAA+GGG | 0.524834 | 7:-69623215 | MsG0780039841.01.T01:CDS |
| AATCATCTTAGCTGTGCTTG+TGG | 0.526234 | 7:-69621524 | MsG0780039841.01.T01:three_prime_UTR |
| ATAACGAAGTATGAGATCAA+TGG | 0.526239 | 7:-69623191 | MsG0780039841.01.T01:CDS |
| ATTATCTGGTATGACTGCTC+AGG | 0.527016 | 7:-69623054 | MsG0780039841.01.T01:CDS |
| CTGGTTCAATTCATACTCAG+TGG | 0.531058 | 7:-69621077 | MsG0780039841.01.T01:three_prime_UTR |
| AACAACGGGTACTAGGCATA+AGG | 0.535624 | 7:+69621170 | None:intergenic |
| CTTTGGAGTAAATCAGGAAA+GGG | 0.536849 | 7:-69623418 | None:intergenic |
| TGGTCAGCTACATTGGCCTA+TGG | 0.539948 | 7:-69621401 | MsG0780039841.01.T01:three_prime_UTR |
| ATGGTTCTTTCATCCATACC+TGG | 0.540615 | 7:+69623153 | None:intergenic |
| GGGCAAAGGGTCTTCCCGTA+GGG | 0.543039 | 7:-69623229 | MsG0780039841.01.T01:CDS |
| AATAAAATAGCATAATGTGT+TGG | 0.544876 | 7:-69621227 | MsG0780039841.01.T01:three_prime_UTR |
| GGAATCAATCTCCTCTGTCA+AGG | 0.548212 | 7:-69621445 | MsG0780039841.01.T01:three_prime_UTR |
| CCAGTGGTGAATTCCAGGTA+TGG | 0.563237 | 7:-69623166 | MsG0780039841.01.T01:CDS |
| GAATCAATCTCCTCTGTCAA+GGG | 0.565819 | 7:-69621444 | MsG0780039841.01.T01:three_prime_UTR |
| CCATACCTGGAATTCACCAC+TGG | 0.573203 | 7:+69623166 | None:intergenic |
| GAGTAAATCAGGAAAGGGAA+AGG | 0.574109 | 7:-69623413 | MsG0780039841.01.T01:five_prime_UTR |
| CCTTTGGAGTAAATCAGGAA+AGG | 0.577230 | 7:-69623419 | None:intergenic |
| TACGACGAATTAAGGGCAAA+GGG | 0.581070 | 7:-69623242 | MsG0780039841.01.T01:CDS |
| TCTCCTCTGTCAAGGGACAA+AGG | 0.584906 | 7:-69621437 | MsG0780039841.01.T01:three_prime_UTR |
| AAGTGAATGAGACCAGAGCT+AGG | 0.587179 | 7:+69622987 | None:intergenic |
| ATACGACGAATTAAGGGCAA+AGG | 0.587742 | 7:-69623243 | MsG0780039841.01.T01:CDS |
| AGGGCAAAGGGTCTTCCCGT+AGG | 0.591812 | 7:-69623230 | MsG0780039841.01.T01:CDS |
| TTTGATCTTGCCATAACCAA+GGG | 0.597810 | 7:+69623079 | None:intergenic |
| CATCCTTTGTCCCTTGACAG+AGG | 0.599238 | 7:+69621434 | None:intergenic |
| CTTTGATCTTGCCATAACCA+AGG | 0.603621 | 7:+69623078 | None:intergenic |
| TGAAAGAACCATGTAATGCA+AGG | 0.604149 | 7:-69623142 | MsG0780039841.01.T01:CDS |
| ACCTCAGGGTTGCAATCAGG+AGG | 0.606111 | 7:+69622915 | None:intergenic |
| CTAGTCAGGAATGTTGGATA+CGG | 0.617698 | 7:-69621361 | MsG0780039841.01.T01:three_prime_UTR |
| TAATGCAAGGTTTGAAAACG+AGG | 0.621104 | 7:-69623129 | MsG0780039841.01.T01:CDS |
| AAATTTCCATAAAAGAACAA+CGG | 0.621722 | 7:+69621155 | None:intergenic |
| GAAGGTGCATAACCACGAAA+CGG | 0.625785 | 7:+69623292 | None:intergenic |
| TGAATTTGAACCGTTTGCGA+AGG | 0.628533 | 7:+69623274 | None:intergenic |
| TGATAGTGATGATGTGCTGA+GGG | 0.630817 | 7:-69621604 | MsG0780039841.01.T01:CDS |
| CTGATAGTGATGATGTGCTG+AGG | 0.631058 | 7:-69621605 | MsG0780039841.01.T01:CDS |
| TATGAGATCAATGGAACCAG+TGG | 0.634964 | 7:-69623182 | MsG0780039841.01.T01:CDS |
| TCCTCCTGATTGCAACCCTG+AGG | 0.641213 | 7:-69622916 | MsG0780039841.01.T01:intron |
| GGTTCAATTCATACTCAGTG+GGG | 0.699275 | 7:-69621075 | MsG0780039841.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAATAACAAATCA+AGG | + | Chr7:69621559-69621578 | None:intergenic | 10.0% |
| !!! | TATGAAATTTTTGATTAATT+TGG | - | Chr7:69622785-69622804 | MsG0780039841.01.T01:intron | 10.0% |
| !!! | TTATTTATTTTTTCTCTTTT+GGG | - | Chr7:69621566-69621585 | MsG0780039841.01.T01:three_prime_UTR | 10.0% |
| !! | TTACATATATTTGTGATTTA+TGG | - | Chr7:69622455-69622474 | MsG0780039841.01.T01:intron | 15.0% |
| !!! | AAATTCATGTTTTTAATAGT+TGG | - | Chr7:69621685-69621704 | MsG0780039841.01.T01:intron | 15.0% |
| !!! | AATTCATGTTTTTAATAGTT+GGG | - | Chr7:69621686-69621705 | MsG0780039841.01.T01:intron | 15.0% |
| !!! | ATATAAGCAAAATCTTATTT+TGG | - | Chr7:69622114-69622133 | MsG0780039841.01.T01:intron | 15.0% |
| !!! | GTTATTTATTTTTTCTCTTT+TGG | - | Chr7:69621565-69621584 | MsG0780039841.01.T01:three_prime_UTR | 15.0% |
| !!! | TTCTTTTATGGAAATTTTTA+AGG | - | Chr7:69623287-69623306 | MsG0780039841.01.T01:CDS | 15.0% |
| !! | AAATTTCCATAAAAGAACAA+CGG | + | Chr7:69623284-69623303 | None:intergenic | 20.0% |
| !! | AATAAAATAGCATAATGTGT+TGG | - | Chr7:69623209-69623228 | MsG0780039841.01.T01:CDS | 20.0% |
| !! | AATAAATAACAAATCAAGGA+TGG | + | Chr7:69621555-69621574 | None:intergenic | 20.0% |
| !! | TAGTGTTCTATATAATACTA+AGG | - | Chr7:69623111-69623130 | MsG0780039841.01.T01:CDS | 20.0% |
| !! | TTTATAATTGCAGAAAATTG+TGG | + | Chr7:69622626-69622645 | None:intergenic | 20.0% |
| !!! | AAAGTTGTGATTTTTTTTGT+TGG | - | Chr7:69621655-69621674 | MsG0780039841.01.T01:intron | 20.0% |
| !!! | AAATTCATGTTTTTTGTAGT+TGG | - | Chr7:69621595-69621614 | MsG0780039841.01.T01:CDS | 20.0% |
| !!! | AAATTTATGTTGTTTATCAG+TGG | - | Chr7:69622758-69622777 | MsG0780039841.01.T01:intron | 20.0% |
| !!! | AAGATTTTGTGATTCAAATT+GGG | + | Chr7:69622057-69622076 | None:intergenic | 20.0% |
| !!! | AAGGTTTTGTTATCTTTTTT+TGG | - | Chr7:69623130-69623149 | MsG0780039841.01.T01:CDS | 20.0% |
| !!! | AAGTTGTGATTTTTTTTGTT+GGG | - | Chr7:69621656-69621675 | MsG0780039841.01.T01:intron | 20.0% |
| !!! | AATTCATGTTTTTTGTAGTT+GGG | - | Chr7:69621596-69621615 | MsG0780039841.01.T01:CDS | 20.0% |
| !!! | AATTTATGTTGTTTATCAGT+GGG | - | Chr7:69622759-69622778 | MsG0780039841.01.T01:intron | 20.0% |
| !!! | AGATTCATGTTTTTGTTATT+TGG | - | Chr7:69621625-69621644 | MsG0780039841.01.T01:intron | 20.0% |
| !!! | GATTCATGTTTTTGTTATTT+GGG | - | Chr7:69621626-69621645 | MsG0780039841.01.T01:intron | 20.0% |
| !!! | TAAGATTTTGTGATTCAAAT+TGG | + | Chr7:69622058-69622077 | None:intergenic | 20.0% |
| !!! | TTTAAAGGTTTTTTGTCTTA+TGG | - | Chr7:69622428-69622447 | MsG0780039841.01.T01:intron | 20.0% |
| !!! | TTTTAAAGTTGTGATTTTCA+TGG | - | Chr7:69621742-69621761 | MsG0780039841.01.T01:intron | 20.0% |
| !!! | TTTTTCTTTTGGTGTTATAA+TGG | - | Chr7:69621820-69621839 | MsG0780039841.01.T01:intron | 20.0% |
| ! | AAGCAAACATTGAAAACTAT+AGG | + | Chr7:69623330-69623349 | None:intergenic | 25.0% |
| ! | AATTTCCATAAAAGAACAAC+GGG | + | Chr7:69623283-69623302 | None:intergenic | 25.0% |
| ! | ATTCCTGAAAACCATAAAAT+TGG | + | Chr7:69622710-69622729 | None:intergenic | 25.0% |
| ! | ATTGAAAACTATAGGCAAAA+TGG | + | Chr7:69623322-69623341 | None:intergenic | 25.0% |
| ! | ATTTGCAAGGTAGTTAAAAT+CGG | + | Chr7:69622553-69622572 | None:intergenic | 25.0% |
| ! | CACTATGATCCTAATATTAA+GGG | - | Chr7:69621332-69621351 | MsG0780039841.01.T01:three_prime_UTR | 25.0% |
| ! | GCTATGATCTTATATTAAAC+AGG | - | Chr7:69621869-69621888 | MsG0780039841.01.T01:intron | 25.0% |
| ! | GGGTACAAAAATACAAATAT+TGG | + | Chr7:69623396-69623415 | None:intergenic | 25.0% |
| ! | TCACTATGATCCTAATATTA+AGG | - | Chr7:69621331-69621350 | MsG0780039841.01.T01:three_prime_UTR | 25.0% |
| ! | TTTACTCAAGTGTGATTTAA+AGG | - | Chr7:69622413-69622432 | MsG0780039841.01.T01:intron | 25.0% |
| !! | ACCAACAAACAATTTTAAAC+AGG | + | Chr7:69623417-69623436 | None:intergenic | 25.0% |
| !! | ATGTTTGCTTTGTAATTTTC+TGG | - | Chr7:69623340-69623359 | MsG0780039841.01.T01:CDS | 25.0% |
| !! | ATTTATGTTGTTTATCAGTG+GGG | - | Chr7:69622760-69622779 | MsG0780039841.01.T01:intron | 25.0% |
| !! | ATTTTACGGAAAATTGGAAA+GGG | + | Chr7:69622529-69622548 | None:intergenic | 25.0% |
| !! | CCAACAAACAATTTTAAACA+GGG | + | Chr7:69623416-69623435 | None:intergenic | 25.0% |
| !! | TACAAACATGACCAATTTTA+TGG | - | Chr7:69622696-69622715 | MsG0780039841.01.T01:intron | 25.0% |
| !! | TAGTTAAAATCGGGATTTTA+CGG | + | Chr7:69622543-69622562 | None:intergenic | 25.0% |
| !! | TATCCATGTAGTTTTTCTTT+TGG | - | Chr7:69621809-69621828 | MsG0780039841.01.T01:intron | 25.0% |
| !! | TGTTTAAAATTGTTTGTTGG+TGG | - | Chr7:69623416-69623435 | MsG0780039841.01.T01:five_prime_UTR | 25.0% |
| !!! | AGATTCAGGTTTTTTACTAT+TGG | - | Chr7:69621715-69621734 | MsG0780039841.01.T01:intron | 25.0% |
| !!! | ATTAGACAACACTTGTTATA+AGG | + | Chr7:69621933-69621952 | None:intergenic | 25.0% |
| !!! | ATTCAGGTTTTTTACTATTG+GGG | - | Chr7:69621717-69621736 | MsG0780039841.01.T01:intron | 25.0% |
| !!! | ATTGTTGGTTTCTTTTTTGT+TGG | - | Chr7:69622728-69622747 | MsG0780039841.01.T01:intron | 25.0% |
| !!! | ATTTGGTGTTTAATTTACAC+AGG | - | Chr7:69622802-69622821 | MsG0780039841.01.T01:intron | 25.0% |
| !!! | GATTCAGGTTTTTTACTATT+GGG | - | Chr7:69621716-69621735 | MsG0780039841.01.T01:intron | 25.0% |
| !!! | TAAGCAAAATCTTATTTTGG+TGG | - | Chr7:69622117-69622136 | MsG0780039841.01.T01:intron | 25.0% |
| !!! | TATTTTTGCACAAGTTTTTC+AGG | - | Chr7:69623159-69623178 | MsG0780039841.01.T01:CDS | 25.0% |
| !!! | TTGTTGGTTTCTTTTTTGTT+GGG | - | Chr7:69622729-69622748 | MsG0780039841.01.T01:intron | 25.0% |
| AACCATATACGACGAATTAA+GGG | - | Chr7:69621187-69621206 | MsG0780039841.01.T01:three_prime_UTR | 30.0% | |
| ACACCAAAAGAAAAACTACA+TGG | + | Chr7:69621815-69621834 | None:intergenic | 30.0% | |
| AGAAGAAGATGAAAATTCGA+TGG | + | Chr7:69621110-69621129 | None:intergenic | 30.0% | |
| ATAACGAAGTATGAGATCAA+TGG | - | Chr7:69621245-69621264 | MsG0780039841.01.T01:three_prime_UTR | 30.0% | |
| ATCTTATATTAAACAGGCCA+TGG | - | Chr7:69621875-69621894 | MsG0780039841.01.T01:intron | 30.0% | |
| ATTATACGATTATGATCGCA+GGG | - | Chr7:69622180-69622199 | MsG0780039841.01.T01:intron | 30.0% | |
| CTTATATTCATAATCGCAGA+GGG | + | Chr7:69622101-69622120 | None:intergenic | 30.0% | |
| TAGATTATAACAATCTCCAC+AGG | + | Chr7:69622146-69622165 | None:intergenic | 30.0% | |
| TTCTTATGGTTTCCTGTTAA+GGG | - | Chr7:69621410-69621429 | MsG0780039841.01.T01:three_prime_UTR | 30.0% | |
| TTTGCAAGGTAGTTAAAATC+GGG | + | Chr7:69622552-69622571 | None:intergenic | 30.0% | |
| ! | AAAGTTGTGATTTTCATGGT+TGG | - | Chr7:69621746-69621765 | MsG0780039841.01.T01:intron | 30.0% |
| ! | AAGTTGTGATTTTCATGGTT+GGG | - | Chr7:69621747-69621766 | MsG0780039841.01.T01:intron | 30.0% |
| ! | AGTCTTTTTCTTTTTCTGCT+TGG | - | Chr7:69622965-69622984 | MsG0780039841.01.T01:CDS | 30.0% |
| ! | CCCTGTTTAAAATTGTTTGT+TGG | - | Chr7:69623413-69623432 | MsG0780039841.01.T01:five_prime_UTR | 30.0% |
| ! | GATTTTACGGAAAATTGGAA+AGG | + | Chr7:69622530-69622549 | None:intergenic | 30.0% |
| ! | TGACCAATTTTATGGTTTTC+AGG | - | Chr7:69622704-69622723 | MsG0780039841.01.T01:intron | 30.0% |
| ! | TTTTACGGAAAATTGGAAAG+GGG | + | Chr7:69622528-69622547 | None:intergenic | 30.0% |
| ! | TTTTCAAACCTTGCATTACA+TGG | + | Chr7:69621305-69621324 | None:intergenic | 30.0% |
| ! | TTTTCTTTTTCTGCTTGGAT+TGG | - | Chr7:69622970-69622989 | MsG0780039841.01.T01:CDS | 30.0% |
| !! | TTATGGTTTTCAGGAATTGT+TGG | - | Chr7:69622713-69622732 | MsG0780039841.01.T01:intron | 30.0% |
| ACCAACAGCTATTATTTGCA+AGG | + | Chr7:69622566-69622585 | None:intergenic | 35.0% | |
| ACCTTGCAAATAATAGCTGT+TGG | - | Chr7:69622562-69622581 | MsG0780039841.01.T01:intron | 35.0% | |
| ATAAAAGAACAACGGGTACT+AGG | + | Chr7:69623276-69623295 | None:intergenic | 35.0% | |
| CAACCATATACGACGAATTA+AGG | - | Chr7:69621186-69621205 | MsG0780039841.01.T01:three_prime_UTR | 35.0% | |
| GATTATACGATTATGATCGC+AGG | - | Chr7:69622179-69622198 | MsG0780039841.01.T01:intron | 35.0% | |
| GCTTATATTCATAATCGCAG+AGG | + | Chr7:69622102-69622121 | None:intergenic | 35.0% | |
| GGTATAGCAATGTAACATAG+AGG | - | Chr7:69622588-69622607 | MsG0780039841.01.T01:intron | 35.0% | |
| GTTCTTATGGTTTCCTGTTA+AGG | - | Chr7:69621409-69621428 | MsG0780039841.01.T01:three_prime_UTR | 35.0% | |
| TAATGCAAGGTTTGAAAACG+AGG | - | Chr7:69621307-69621326 | MsG0780039841.01.T01:three_prime_UTR | 35.0% | |
| TCATACTTCGTTATTCCCTT+TGG | + | Chr7:69621239-69621258 | None:intergenic | 35.0% | |
| TGAAAGAACCATGTAATGCA+AGG | - | Chr7:69621294-69621313 | MsG0780039841.01.T01:three_prime_UTR | 35.0% | |
| TGGTTCAATTCATACTCAGT+GGG | - | Chr7:69623360-69623379 | MsG0780039841.01.T01:CDS | 35.0% | |
| TTATACGATTATGATCGCAG+GGG | - | Chr7:69622181-69622200 | MsG0780039841.01.T01:intron | 35.0% | |
| TTTGATCTTGCCATAACCAA+GGG | + | Chr7:69621360-69621379 | None:intergenic | 35.0% | |
| ! | ACAAAGGATGACAATTTTGG+TGG | - | Chr7:69623015-69623034 | MsG0780039841.01.T01:CDS | 35.0% |
| ! | ACAGATTTTGCCAATACCAT+AGG | + | Chr7:69623054-69623073 | None:intergenic | 35.0% |
| ! | ATCGGGATTTTACGGAAAAT+TGG | + | Chr7:69622535-69622554 | None:intergenic | 35.0% |
| ! | TAGTACCCGTTGTTCTTTTA+TGG | - | Chr7:69623275-69623294 | MsG0780039841.01.T01:CDS | 35.0% |
| !! | TGGTGTTGATAATTAGAGTG+AGG | - | Chr7:69621840-69621859 | MsG0780039841.01.T01:intron | 35.0% |
| AATCATCTTAGCTGTGCTTG+TGG | - | Chr7:69622912-69622931 | MsG0780039841.01.T01:intron | 40.0% | |
| AGGATGGATGAAAAAACCTC+AGG | + | Chr7:69621539-69621558 | None:intergenic | 40.0% | |
| ATACGACGAATTAAGGGCAA+AGG | - | Chr7:69621193-69621212 | MsG0780039841.01.T01:three_prime_UTR | 40.0% | |
| ATGGTTCTTTCATCCATACC+TGG | + | Chr7:69621286-69621305 | None:intergenic | 40.0% | |
| ATTATCTGGTATGACTGCTC+AGG | - | Chr7:69621382-69621401 | MsG0780039841.01.T01:three_prime_UTR | 40.0% | |
| CTAGTCAGGAATGTTGGATA+CGG | - | Chr7:69623075-69623094 | MsG0780039841.01.T01:CDS | 40.0% | |
| CTGGTTCAATTCATACTCAG+TGG | - | Chr7:69623359-69623378 | MsG0780039841.01.T01:CDS | 40.0% | |
| CTTGGTTATGGCAAGATCAA+AGG | - | Chr7:69621359-69621378 | MsG0780039841.01.T01:three_prime_UTR | 40.0% | |
| CTTTGATCTTGCCATAACCA+AGG | + | Chr7:69621361-69621380 | None:intergenic | 40.0% | |
| GAATCAATCTCCTCTGTCAA+GGG | - | Chr7:69622992-69623011 | MsG0780039841.01.T01:CDS | 40.0% | |
| GAGTAAATCAGGAAAGGGAA+AGG | - | Chr7:69621023-69621042 | MsG0780039841.01.T01:three_prime_UTR | 40.0% | |
| GCAAATAATAGCTGTTGGTG+TGG | - | Chr7:69622567-69622586 | MsG0780039841.01.T01:intron | 40.0% | |
| GGATGGATGAAAAAACCTCA+GGG | + | Chr7:69621538-69621557 | None:intergenic | 40.0% | |
| GGCAAGATCAAAGGATTATC+TGG | - | Chr7:69621368-69621387 | MsG0780039841.01.T01:three_prime_UTR | 40.0% | |
| GGTCTCATTCACTTTGATGT+TGG | - | Chr7:69621458-69621477 | MsG0780039841.01.T01:three_prime_UTR | 40.0% | |
| GGTTCAATTCATACTCAGTG+GGG | - | Chr7:69623361-69623380 | MsG0780039841.01.T01:CDS | 40.0% | |
| TACGACGAATTAAGGGCAAA+GGG | - | Chr7:69621194-69621213 | MsG0780039841.01.T01:three_prime_UTR | 40.0% | |
| TAGTTGGGTGTATGAGATTC+AGG | - | Chr7:69621701-69621720 | MsG0780039841.01.T01:intron | 40.0% | |
| TATGAGATCAATGGAACCAG+TGG | - | Chr7:69621254-69621273 | MsG0780039841.01.T01:three_prime_UTR | 40.0% | |
| TGAATTTGAACCGTTTGCGA+AGG | + | Chr7:69621165-69621184 | None:intergenic | 40.0% | |
| TGCCCTTAATTCGTCGTATA+TGG | + | Chr7:69621192-69621211 | None:intergenic | 40.0% | |
| TGTCTAGTGACAACTGACTA+AGG | + | Chr7:69621901-69621920 | None:intergenic | 40.0% | |
| ! | GGGACAAAGGATGACAATTT+TGG | - | Chr7:69623012-69623031 | MsG0780039841.01.T01:CDS | 40.0% |
| ! | TGATAGTGATGATGTGCTGA+GGG | - | Chr7:69622832-69622851 | MsG0780039841.01.T01:intron | 40.0% |
| !! | ATTAAGGGTACCCTTGGTTA+TGG | - | Chr7:69621347-69621366 | MsG0780039841.01.T01:three_prime_UTR | 40.0% |
| !! | ATTTTGGTGGTCAGCTACAT+TGG | - | Chr7:69623028-69623047 | MsG0780039841.01.T01:CDS | 40.0% |
| !! | CCAAGGGTACCCTTAATATT+AGG | + | Chr7:69621344-69621363 | None:intergenic | 40.0% |
| !! | CCTAATATTAAGGGTACCCT+TGG | - | Chr7:69621341-69621360 | MsG0780039841.01.T01:three_prime_UTR | 40.0% |
| !!! | CTTATTTTGGTGGAATCCTG+TGG | - | Chr7:69622127-69622146 | MsG0780039841.01.T01:intron | 40.0% |
| AAAACCTCAGGGTTGCAATC+AGG | + | Chr7:69621527-69621546 | None:intergenic | 45.0% | |
| AACAACGGGTACTAGGCATA+AGG | + | Chr7:69623269-69623288 | None:intergenic | 45.0% | |
| AAGTGAATGAGACCAGAGCT+AGG | + | Chr7:69621452-69621471 | None:intergenic | 45.0% | |
| ATCTTAGCTGTGCTTGTGGT+TGG | - | Chr7:69622916-69622935 | MsG0780039841.01.T01:intron | 45.0% | |
| CAAGCATGTTGCTGCATTTC+AGG | - | Chr7:69622870-69622889 | MsG0780039841.01.T01:intron | 45.0% | |
| CTGCTCAGGAACTGTTCTTA+TGG | - | Chr7:69621396-69621415 | MsG0780039841.01.T01:three_prime_UTR | 45.0% | |
| GGAATCAATCTCCTCTGTCA+AGG | - | Chr7:69622991-69623010 | MsG0780039841.01.T01:CDS | 45.0% | |
| TCAACACGAATGCCCTTAAC+AGG | + | Chr7:69621425-69621444 | None:intergenic | 45.0% | |
| TCTCTCTCTCTCAATGGCTA+TGG | - | Chr7:69621064-69621083 | MsG0780039841.01.T01:three_prime_UTR | 45.0% | |
| TCTCTCTCTCTCTCTCTCAA+TGG | - | Chr7:69621058-69621077 | MsG0780039841.01.T01:three_prime_UTR | 45.0% | |
| TCTGTGCTAGTCAGGAATGT+TGG | - | Chr7:69623069-69623088 | MsG0780039841.01.T01:CDS | 45.0% | |
| TGGCAAAATCTGTGCTAGTC+AGG | - | Chr7:69623061-69623080 | MsG0780039841.01.T01:CDS | 45.0% | |
| TGGTTATGCACCTTCGCAAA+CGG | - | Chr7:69621152-69621171 | MsG0780039841.01.T01:three_prime_UTR | 45.0% | |
| TTCTCGTTCTTACCGTTTCG+TGG | - | Chr7:69621132-69621151 | MsG0780039841.01.T01:three_prime_UTR | 45.0% | |
| TTGAGAGAGAGAGAGAGAGA+TGG | + | Chr7:69621058-69621077 | None:intergenic | 45.0% | |
| ! | CTGATAGTGATGATGTGCTG+AGG | - | Chr7:69622831-69622850 | MsG0780039841.01.T01:intron | 45.0% |
| ! | GAAGGTGCATAACCACGAAA+CGG | + | Chr7:69621147-69621166 | None:intergenic | 45.0% |
| ! | GCTACATTGGCCTATGGTAT+TGG | - | Chr7:69623041-69623060 | MsG0780039841.01.T01:CDS | 45.0% |
| !! | TCGCAATTTGTTGTTCCGCT+AGG | + | Chr7:69621975-69621994 | None:intergenic | 45.0% |
| ATGATGTGCTGAGGGCTGTT+TGG | - | Chr7:69622840-69622859 | MsG0780039841.01.T01:intron | 50.0% | |
| CATCCTTTGTCCCTTGACAG+AGG | + | Chr7:69623005-69623024 | None:intergenic | 50.0% | |
| CCAGTGGTGAATTCCAGGTA+TGG | - | Chr7:69621270-69621289 | MsG0780039841.01.T01:three_prime_UTR | 50.0% | |
| CCATACCTGGAATTCACCAC+TGG | + | Chr7:69621273-69621292 | None:intergenic | 50.0% | |
| CTCTCAATGGCTATGGCTAG+TGG | - | Chr7:69621071-69621090 | MsG0780039841.01.T01:three_prime_UTR | 50.0% | |
| GATGTAGCGCTATAGCCTAG+CGG | - | Chr7:69621957-69621976 | MsG0780039841.01.T01:intron | 50.0% | |
| GTGACAACTGACTAAGGCCA+TGG | + | Chr7:69621895-69621914 | None:intergenic | 50.0% | |
| TACGATTATGATCGCAGGGG+TGG | - | Chr7:69622184-69622203 | MsG0780039841.01.T01:intron | 50.0% | |
| TCCCTTTGGTAGAAGCCCTA+CGG | + | Chr7:69621225-69621244 | None:intergenic | 50.0% | |
| TCTCCTCTGTCAAGGGACAA+AGG | - | Chr7:69622999-69623018 | MsG0780039841.01.T01:CDS | 50.0% | |
| TGGAACCAGTGGTGAATTCC+AGG | - | Chr7:69621265-69621284 | MsG0780039841.01.T01:three_prime_UTR | 50.0% | |
| ! | CGTGTTGATCTACCTAGCTC+TGG | - | Chr7:69621437-69621456 | MsG0780039841.01.T01:three_prime_UTR | 50.0% |
| ! | TGGTCAGCTACATTGGCCTA+TGG | - | Chr7:69623035-69623054 | MsG0780039841.01.T01:CDS | 50.0% |
| ACCTCAGGGTTGCAATCAGG+AGG | + | Chr7:69621524-69621543 | None:intergenic | 55.0% | |
| CCCGTAGGGCTTCTACCAAA+GGG | - | Chr7:69621221-69621240 | MsG0780039841.01.T01:three_prime_UTR | 55.0% | |
| CCCTTTGGTAGAAGCCCTAC+GGG | + | Chr7:69621224-69621243 | None:intergenic | 55.0% | |
| TCCCGTAGGGCTTCTACCAA+AGG | - | Chr7:69621220-69621239 | MsG0780039841.01.T01:three_prime_UTR | 55.0% | |
| TCCTCCTGATTGCAACCCTG+AGG | - | Chr7:69621520-69621539 | MsG0780039841.01.T01:three_prime_UTR | 55.0% | |
| AGGGCAAAGGGTCTTCCCGT+AGG | - | Chr7:69621206-69621225 | MsG0780039841.01.T01:three_prime_UTR | 60.0% | |
| GGGCAAAGGGTCTTCCCGTA+GGG | - | Chr7:69621207-69621226 | MsG0780039841.01.T01:three_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 69621022 | 69623436 | 69621022 | ID=MsG0780039841.01;Name=MsG0780039841.01 |
| Chr7 | mRNA | 69621022 | 69623436 | 69621022 | ID=MsG0780039841.01.T01;Parent=MsG0780039841.01;Name=MsG0780039841.01.T01;_AED=0.49;_eAED=0.49;_QI=55|1|1|1|1|1|2|571|168 |
| Chr7 | exon | 69621022 | 69621634 | 69621022 | ID=MsG0780039841.01.T01:exon:12641;Parent=MsG0780039841.01.T01 |
| Chr7 | exon | 69622917 | 69623436 | 69622917 | ID=MsG0780039841.01.T01:exon:12640;Parent=MsG0780039841.01.T01 |
| Chr7 | five_prime_UTR | 69623382 | 69623436 | 69623382 | ID=MsG0780039841.01.T01:five_prime_utr;Parent=MsG0780039841.01.T01 |
| Chr7 | CDS | 69622917 | 69623381 | 69622917 | ID=MsG0780039841.01.T01:cds;Parent=MsG0780039841.01.T01 |
| Chr7 | CDS | 69621593 | 69621634 | 69621593 | ID=MsG0780039841.01.T01:cds;Parent=MsG0780039841.01.T01 |
| Chr7 | three_prime_UTR | 69621022 | 69621592 | 69621022 | ID=MsG0780039841.01.T01:three_prime_utr;Parent=MsG0780039841.01.T01 |
| Gene Sequence |
| Protein sequence |
