AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036425.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036425.01.T01 MTR_3g092070 87.075 147 13 2 13 153 24 170 4.83e-84 252
MsG0780036425.01.T01 MTR_3g092070 87.075 147 13 2 13 153 24 170 9.61e-84 249
MsG0780036425.01.T01 MTR_3g092080 76.000 150 29 3 7 149 20 169 1.64e-72 222
MsG0780036425.01.T01 MTR_3g092080 76.000 150 29 3 7 149 20 169 2.15e-72 223
MsG0780036425.01.T01 MTR_4g074920 54.745 137 53 2 17 153 631 758 2.26e-39 141
MsG0780036425.01.T01 MTR_3g089100 51.493 134 60 2 20 153 863 991 1.23e-36 134
MsG0780036425.01.T01 MTR_3g089100 51.493 134 60 2 20 153 858 986 1.24e-36 134
MsG0780036425.01.T01 MTR_3g089100 51.493 134 60 2 20 153 892 1020 1.24e-36 134
MsG0780036425.01.T01 MTR_1g088730 51.852 135 63 2 19 153 889 1021 2.65e-36 132
MsG0780036425.01.T01 MTR_1g088750 57.407 108 46 0 46 153 871 978 1.39e-35 130
MsG0780036425.01.T01 MTR_1g088750 57.407 108 46 0 46 153 920 1027 1.50e-35 130
MsG0780036425.01.T01 MTR_8g099065 61.165 103 39 1 46 148 516 617 8.34e-35 128
MsG0780036425.01.T01 MTR_8g099065 61.165 103 39 1 46 148 516 617 8.95e-35 128
MsG0780036425.01.T01 MTR_6g033740 50.000 134 60 2 21 148 451 583 7.29e-33 122
MsG0780036425.01.T01 MTR_5g009840 58.252 103 42 1 46 148 498 599 3.69e-32 120
MsG0780036425.01.T01 MTR_1g101870 58.252 103 43 0 46 148 539 641 2.79e-31 118
MsG0780036425.01.T01 MTR_1g101870 58.252 103 43 0 46 148 487 589 3.10e-31 118
MsG0780036425.01.T01 MTR_1g099470 54.369 103 47 0 46 148 416 518 2.45e-30 115
MsG0780036425.01.T01 MTR_1g099480 54.369 103 47 0 46 148 450 552 4.62e-30 115
MsG0780036425.01.T01 MTR_1g099480 54.369 103 47 0 46 148 450 552 5.50e-30 114
MsG0780036425.01.T01 MTR_7g075520 39.474 152 85 3 7 153 150 299 1.78e-26 103
MsG0780036425.01.T01 MTR_4g096870 44.545 110 58 2 44 153 100 206 5.87e-24 96.7
MsG0780036425.01.T01 MTR_6g023855 49.451 91 44 1 63 153 245 333 7.60e-22 91.3
MsG0780036425.01.T01 MTR_4g011810 46.667 90 46 1 64 153 242 329 8.65e-22 91.3
MsG0780036425.01.T01 MTR_6g023875 45.918 98 50 2 52 149 371 465 9.24e-22 91.3
MsG0780036425.01.T01 MTR_6g023865 43.810 105 56 2 45 149 140 241 5.27e-21 88.6
MsG0780036425.01.T01 MTR_2g086160 44.828 87 46 1 63 149 131 215 3.03e-20 85.9
MsG0780036425.01.T01 MTR_4g053350 45.977 87 45 1 63 149 126 210 3.12e-20 86.3
MsG0780036425.01.T01 MTR_4g053350 45.977 87 45 1 63 149 126 210 3.16e-20 86.3
MsG0780036425.01.T01 MTR_2g086160 44.828 87 46 1 63 149 131 215 8.46e-20 85.1
MsG0780036425.01.T01 MTR_7g101870 48.780 82 41 1 66 147 481 561 2.44e-19 84.3
MsG0780036425.01.T01 MTR_7g101870 44.828 87 43 2 63 147 205 288 1.07e-16 76.6
MsG0780036425.01.T01 MTR_1g063380 47.059 85 44 1 63 147 477 560 2.79e-19 84.0
MsG0780036425.01.T01 MTR_1g063380 44.086 93 46 3 58 147 198 287 6.81e-17 77.0
MsG0780036425.01.T01 MTR_2g095320 47.059 85 44 1 63 147 420 503 5.60e-19 83.2
MsG0780036425.01.T01 MTR_2g095320 41.379 87 42 3 63 147 152 231 2.70e-12 63.9
MsG0780036425.01.T01 MTR_2g095210 47.619 84 43 1 63 146 405 487 7.35e-19 82.8
MsG0780036425.01.T01 MTR_2g095210 43.333 90 49 2 63 151 206 294 3.39e-15 72.4
MsG0780036425.01.T01 MTR_7g089290 45.556 90 47 1 59 148 662 749 1.96e-18 81.6
MsG0780036425.01.T01 MTR_7g089290 45.556 90 47 1 59 148 634 721 2.24e-18 81.6
MsG0780036425.01.T01 MTR_4g094270 44.828 87 47 1 63 149 155 240 5.47e-18 80.1
MsG0780036425.01.T01 MTR_3g062510 43.956 91 50 1 63 153 158 247 9.23e-18 79.3
MsG0780036425.01.T01 MTR_3g062510 43.956 91 50 1 63 153 158 247 9.46e-18 79.0
MsG0780036425.01.T01 MTR_3g117230 41.000 100 58 1 50 149 125 223 4.01e-17 77.4
MsG0780036425.01.T01 MTR_3g112260 40.000 100 59 1 50 149 122 220 6.30e-17 77.0
MsG0780036425.01.T01 MTR_1g069105 46.429 84 44 1 66 149 190 272 4.42e-16 74.7
MsG0780036425.01.T01 MTR_7g099640 46.429 84 44 1 66 149 189 271 4.65e-16 74.7
MsG0780036425.01.T01 MTR_7g099640 46.429 84 44 1 66 149 189 271 4.68e-16 74.7
MsG0780036425.01.T01 MTR_1g069105 46.429 84 44 1 66 149 190 272 4.73e-16 74.7
MsG0780036425.01.T01 MTR_1g095660 43.182 88 47 2 63 149 117 202 5.98e-16 73.9
MsG0780036425.01.T01 MTR_1g083330 43.023 86 46 2 65 149 168 251 3.27e-15 72.0
MsG0780036425.01.T01 MTR_4g033235 43.023 86 46 2 65 149 169 252 3.71e-15 72.0
MsG0780036425.01.T01 MTR_4g112600 45.122 82 39 3 67 145 3 81 1.03e-14 65.9
MsG0780036425.01.T01 MTR_7g088830 39.080 87 48 2 64 148 658 741 1.89e-14 70.1
MsG0780036425.01.T01 MTR_4g067100 41.414 99 50 3 57 148 371 468 4.10e-14 69.3
MsG0780036425.01.T01 MTR_4g067100 41.414 99 50 3 57 148 371 468 4.26e-14 69.3
MsG0780036425.01.T01 MTR_7g089040 39.080 87 48 2 64 148 685 768 5.71e-14 68.9
MsG0780036425.01.T01 MTR_3g023900 34.884 86 55 1 63 148 530 614 1.63e-13 67.4
MsG0780036425.01.T01 MTR_2g007010 32.941 85 56 1 63 147 527 610 2.23e-13 67.0
MsG0780036425.01.T01 MTR_7g088850 40.476 84 49 1 64 147 282 364 9.78e-13 65.1
MsG0780036425.01.T01 MTR_4g094662 43.210 81 44 2 64 144 229 307 2.66e-11 61.2
MsG0780036425.01.T01 MTR_3g096000 41.237 97 55 2 64 160 296 390 4.38e-11 60.5
MsG0780036425.01.T01 MTR_2g438140 43.210 81 44 2 64 144 226 304 5.79e-11 60.1
MsG0780036425.01.T01 MTR_2g438140 43.210 81 44 2 64 144 286 364 5.98e-11 60.1
MsG0780036425.01.T01 MTR_3g023890 40.000 85 48 3 63 146 384 466 6.11e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036425.01.T01 AT4G27680 76.774 155 29 3 6 153 16 170 2.44e-76 233
MsG0780036425.01.T01 AT5G53540 71.613 155 37 3 6 153 19 173 6.06e-70 216
MsG0780036425.01.T01 AT4G02480 59.259 108 44 0 46 153 942 1049 6.69e-38 137
MsG0780036425.01.T01 AT3G19740 55.556 126 51 1 28 153 670 790 2.32e-37 135
MsG0780036425.01.T01 AT1G02890 58.333 108 45 0 46 153 923 1030 1.13e-36 134
MsG0780036425.01.T01 AT4G24860 59.259 108 44 0 46 153 772 879 3.77e-36 132
MsG0780036425.01.T01 AT4G24860 59.259 108 44 0 46 153 799 906 3.97e-36 132
MsG0780036425.01.T01 AT4G24860 59.259 108 44 0 46 153 795 902 4.16e-36 132
MsG0780036425.01.T01 AT4G24860 59.259 108 44 0 46 153 797 904 4.16e-36 132
MsG0780036425.01.T01 AT1G50140 57.407 108 46 0 46 153 671 778 3.23e-35 129
MsG0780036425.01.T01 AT1G50140 57.407 108 46 0 46 153 671 778 3.23e-35 129
MsG0780036425.01.T01 AT1G50140 57.407 108 46 0 46 153 693 800 3.46e-35 129
MsG0780036425.01.T01 AT1G50140 57.407 108 46 0 46 153 693 800 3.46e-35 129
MsG0780036425.01.T01 AT1G50140 57.407 108 46 0 46 153 693 800 3.46e-35 129
MsG0780036425.01.T01 AT1G64110 60.194 103 40 1 46 148 500 601 1.99e-34 127
MsG0780036425.01.T01 AT1G64110 60.194 103 40 1 46 148 500 601 1.99e-34 127
MsG0780036425.01.T01 AT1G64110 60.194 103 40 1 46 148 495 596 2.09e-34 127
MsG0780036425.01.T01 AT1G64110 60.194 103 40 1 46 148 498 599 2.13e-34 127
MsG0780036425.01.T01 AT1G64110 60.194 103 40 1 46 148 498 599 2.13e-34 127
MsG0780036425.01.T01 AT5G52882 58.252 103 42 1 46 148 496 597 8.31e-32 120
MsG0780036425.01.T01 AT1G02890 59.375 96 39 0 46 141 923 1018 1.07e-31 119
MsG0780036425.01.T01 AT4G28000 57.282 103 43 1 46 148 499 600 1.09e-31 119
MsG0780036425.01.T01 AT4G28000 57.282 103 43 1 46 148 497 598 1.11e-31 119
MsG0780036425.01.T01 AT4G28000 57.282 103 43 1 46 148 499 600 1.12e-31 119
MsG0780036425.01.T01 AT1G62130 45.324 139 61 3 15 153 712 835 3.51e-28 109
MsG0780036425.01.T01 AT1G62130 45.324 139 61 3 15 153 705 828 4.21e-28 109
MsG0780036425.01.T01 AT2G45500 47.200 125 57 5 40 159 52 172 1.31e-26 103
MsG0780036425.01.T01 AT2G45500 47.200 125 57 5 40 159 52 172 1.31e-26 103
MsG0780036425.01.T01 AT2G45500 47.200 125 57 5 40 159 189 309 3.59e-26 103
MsG0780036425.01.T01 AT2G45500 47.200 125 57 5 40 159 185 305 3.92e-26 103
MsG0780036425.01.T01 AT2G45500 47.200 125 57 5 40 159 195 315 5.45e-26 102
MsG0780036425.01.T01 AT2G34560 47.222 108 50 3 44 149 81 183 2.03e-24 97.4
MsG0780036425.01.T01 AT2G34560 47.222 108 50 3 44 149 90 192 2.06e-24 97.8
MsG0780036425.01.T01 AT3G27120 47.959 98 48 2 52 149 389 483 1.11e-22 94.0
MsG0780036425.01.T01 AT1G80350 46.667 90 46 1 64 153 236 323 6.44e-22 91.7
MsG0780036425.01.T01 AT5G03340 48.235 85 43 1 63 147 476 559 1.93e-19 84.7
MsG0780036425.01.T01 AT5G03340 44.828 87 43 2 63 147 203 286 9.99e-17 76.6
MsG0780036425.01.T01 AT2G27600 44.828 87 46 1 63 149 128 212 1.97e-19 84.3
MsG0780036425.01.T01 AT3G09840 48.235 85 43 1 63 147 476 559 2.38e-19 84.3
MsG0780036425.01.T01 AT3G09840 45.977 87 42 2 63 147 203 286 2.97e-17 78.2
MsG0780036425.01.T01 AT3G53230 47.059 85 44 1 63 147 477 560 3.72e-19 84.0
MsG0780036425.01.T01 AT3G53230 44.828 87 43 2 63 147 204 287 1.13e-16 76.6
MsG0780036425.01.T01 AT1G03000 46.667 90 46 1 59 148 650 737 8.61e-19 82.8
MsG0780036425.01.T01 AT5G19990 44.828 87 47 1 63 149 157 242 6.00e-18 80.1
MsG0780036425.01.T01 AT5G19990 44.828 87 47 1 63 149 157 242 6.00e-18 80.1
MsG0780036425.01.T01 AT5G20000 44.828 87 47 1 63 149 157 242 6.00e-18 80.1
MsG0780036425.01.T01 AT5G58290 43.956 91 50 1 63 153 151 240 6.36e-18 79.7
MsG0780036425.01.T01 AT5G19990 44.828 87 47 1 63 149 99 184 8.55e-18 79.3
MsG0780036425.01.T01 AT1G45000 40.000 100 59 1 50 149 122 220 1.02e-16 75.9
MsG0780036425.01.T01 AT2G20140 47.619 84 43 1 66 149 187 269 1.60e-16 75.9
MsG0780036425.01.T01 AT5G43010 40.000 100 59 1 50 149 122 220 1.63e-16 75.9
MsG0780036425.01.T01 AT1G45000 40.000 100 59 1 50 149 122 220 1.68e-16 75.9
MsG0780036425.01.T01 AT4G29040 47.619 84 43 1 66 149 187 269 1.71e-16 75.9
MsG0780036425.01.T01 AT1G53750 43.182 88 47 2 63 149 164 249 9.63e-16 73.6
MsG0780036425.01.T01 AT1G09100 43.023 86 46 2 65 149 168 251 4.12e-15 72.0
MsG0780036425.01.T01 AT3G05530 43.023 86 46 2 65 149 169 252 4.37e-15 72.0
MsG0780036425.01.T01 AT1G53780 41.573 89 47 2 63 149 357 442 5.37e-15 71.6
MsG0780036425.01.T01 AT1G53780 41.573 89 47 2 63 149 335 420 5.49e-15 71.6
MsG0780036425.01.T01 AT1G53780 41.573 89 47 2 63 149 336 421 5.54e-15 71.6
MsG0780036425.01.T01 AT1G53780 41.573 89 47 2 63 149 336 421 5.54e-15 71.6
MsG0780036425.01.T01 AT1G05910 39.560 91 49 2 63 148 377 466 2.47e-13 67.0
MsG0780036425.01.T01 AT3G56690 37.931 87 49 2 64 148 721 804 5.15e-13 66.2
MsG0780036425.01.T01 AT1G06430 43.210 81 44 2 64 144 217 295 4.12e-11 60.5
MsG0780036425.01.T01 AT1G06430 43.210 81 44 2 64 144 217 295 4.12e-11 60.5
MsG0780036425.01.T01 AT1G06430 43.210 81 44 2 64 144 217 295 4.12e-11 60.5
MsG0780036425.01.T01 AT2G30950 43.210 81 44 2 64 144 228 306 4.60e-11 60.5
MsG0780036425.01.T01 AT2G30950 43.210 81 44 2 64 144 224 302 4.82e-11 60.5
MsG0780036425.01.T01 AT2G30950 43.210 81 44 2 64 144 224 302 4.82e-11 60.5
MsG0780036425.01.T01 AT2G30950 43.210 81 44 2 64 144 224 302 4.82e-11 60.5
MsG0780036425.01.T01 AT5G64580 52.239 67 30 2 64 130 313 377 4.96e-11 60.5

Find 51 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACACACTTACCAAGCTTT+TGG 0.273433 7:+7959471 None:intergenic
CCCCGAACCATTTGCTCATC+AGG 0.276183 7:+7959498 None:intergenic
ACCTGATGAGCAAATGGTTC+GGG 0.335944 7:-7959499 MsG0780036425.01.T01:CDS
AATGGTTACCTCATAGGAAT+TGG 0.349196 7:+7963622 None:intergenic
AAAACAAGTCTGGTCGTTGC+AGG 0.370845 7:+7959651 None:intergenic
TCTCCGATGATTCACGGTTC+AGG 0.373936 7:+7963690 None:intergenic
TTGTATGGACCTCCTGGCAC+TGG 0.386661 7:-7959590 MsG0780036425.01.T01:CDS
GGCGGCGCTGTACTGCGCTT+TGG 0.390801 7:-7963729 MsG0780036425.01.T01:CDS
CTGTACTGCGCTTTGGTCAC+GGG 0.392532 7:-7963722 MsG0780036425.01.T01:CDS
CAAACTTCTTGGACCACAAA+AGG 0.392804 7:-7959621 MsG0780036425.01.T01:CDS
GATGTAGAATTTGACTCTAT+TGG 0.395873 7:-7959722 MsG0780036425.01.T01:CDS
GCTGTACTGCGCTTTGGTCA+CGG 0.403471 7:-7963723 MsG0780036425.01.T01:CDS
TGAAATTTGAAGTTAAAAGT+TGG 0.410149 7:+7963804 None:intergenic
TAGCCTTCTCCGATGATTCA+CGG 0.417840 7:+7963684 None:intergenic
GTCCTGTTGTATGGACCTCC+TGG 0.427197 7:-7959596 MsG0780036425.01.T01:CDS
CTTCTTTCGTTCAAAGGACA+TGG 0.428545 7:-7963774 MsG0780036425.01.T01:exon
GTATCCAACCACCGAATTTG+TGG 0.435521 7:+7963840 None:intergenic
AAACTTCTTGGACCACAAAA+GGG 0.435723 7:-7959620 MsG0780036425.01.T01:CDS
AACCTGATGAGCAAATGGTT+CGG 0.439930 7:-7959500 MsG0780036425.01.T01:CDS
TCTTACGCAGACCACAAATT+CGG 0.451295 7:-7963851 MsG0780036425.01.T01:five_prime_UTR
AGTGTTGTCGTACGCGGCTA+AGG 0.453175 7:-7963750 MsG0780036425.01.T01:CDS
TGCCAGGAGGTCCATACAAC+AGG 0.457002 7:+7959594 None:intergenic
TTGTTCCTTCTTTCGTTCAA+AGG 0.464322 7:-7963780 MsG0780036425.01.T01:five_prime_UTR
GAAAACTGCTCCGGACTCCT+TGG 0.468141 7:+7959541 None:intergenic
AAAGCTATTGCCAAGGAGTC+CGG 0.471305 7:-7959551 MsG0780036425.01.T01:CDS
AATTCTACATCGATGTGGTC+AGG 0.489405 7:+7959734 None:intergenic
TATCAAACCTGATGAGCAAA+TGG 0.495736 7:-7959505 MsG0780036425.01.T01:CDS
ATGATTCACGGTTCAGGTAA+CGG 0.497305 7:+7963696 None:intergenic
TTGCCATGCGAAAACAAGTC+TGG 0.509217 7:+7959641 None:intergenic
GTAGAATTTGACTCTATTGG+TGG 0.512184 7:-7959719 MsG0780036425.01.T01:CDS
CATGTCCTTTGAACGAAAGA+AGG 0.515103 7:+7963775 None:intergenic
TTCGGGGATGCCCAAAAGCT+TGG 0.516170 7:-7959482 MsG0780036425.01.T01:CDS
CACATTAATGAAAACTGCTC+CGG 0.520311 7:+7959532 None:intergenic
TTACCTGAACCGTGAATCAT+CGG 0.528824 7:-7963693 MsG0780036425.01.T01:CDS
AAAGAGATTGCTAAACGTCT+TGG 0.531003 7:-7963662 MsG0780036425.01.T01:CDS
CAGACCACAAATTCGGTGGT+TGG 0.558752 7:-7963844 MsG0780036425.01.T01:five_prime_UTR
TTCTTTCGTTCAAAGGACAT+GGG 0.566698 7:-7963773 MsG0780036425.01.T01:exon
GTTGTCGTACGCGGCTAAGG+CGG 0.569856 7:-7963747 MsG0780036425.01.T01:CDS
AAACAAGTCTGGTCGTTGCA+GGG 0.572120 7:+7959652 None:intergenic
TACGCAGACCACAAATTCGG+TGG 0.589103 7:-7963848 MsG0780036425.01.T01:five_prime_UTR
ACCTCAGAAACTTACGCGAA+AGG 0.600996 7:-7963901 None:intergenic
AACAAGTCTGGTCGTTGCAG+GGG 0.601495 7:+7959653 None:intergenic
AACTTCTTGGACCACAAAAG+GGG 0.602558 7:-7959619 MsG0780036425.01.T01:CDS
TGTATGGACCTCCTGGCACT+GGG 0.603811 7:-7959589 MsG0780036425.01.T01:CDS
GAACCGTGAATCATCGGAGA+AGG 0.605431 7:-7963687 MsG0780036425.01.T01:CDS
TTGTTTACAGGATGTAATAG+CGG 0.608443 7:-7959771 MsG0780036425.01.T01:intron
CATGGGAGTGTTGTCGTACG+CGG 0.640732 7:-7963756 MsG0780036425.01.T01:CDS
GCTCGCAAAAGCTATTGCCA+AGG 0.654543 7:-7959558 MsG0780036425.01.T01:CDS
ACTTCTTGGACCACAAAAGG+GGG 0.656597 7:-7959618 MsG0780036425.01.T01:CDS
CCTGATGAGCAAATGGTTCG+GGG 0.682531 7:-7959498 MsG0780036425.01.T01:CDS
AGTCAAATTCTACATCGATG+TGG 0.703743 7:+7959729 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGCTATTAAAATTAATTA+AGG - Chr7:7960380-7960399 MsG0780036425.01.T01:intron 10.0%
!! AATAAATGACTAATAAAATA+TGG + Chr7:7961508-7961527 None:intergenic 10.0%
!! ATTAAAATATTGTTTATTGA+TGG + Chr7:7962867-7962886 None:intergenic 10.0%
!! TAAAAAAAAAAACTTTATGT+TGG - Chr7:7961758-7961777 MsG0780036425.01.T01:intron 10.0%
!! TATTTCCTATATATAATATA+GGG + Chr7:7961814-7961833 None:intergenic 10.0%
!! TTAAAGTTTATTTACAATTT+GGG - Chr7:7962222-7962241 MsG0780036425.01.T01:intron 10.0%
!! TTATTTCCTATATATAATAT+AGG + Chr7:7961815-7961834 None:intergenic 10.0%
!! TTGTTTAAGTATATTATTTA+AGG - Chr7:7961356-7961375 MsG0780036425.01.T01:intron 10.0%
!! TTTAAATAAGTAAATAACAA+TGG - Chr7:7961141-7961160 MsG0780036425.01.T01:intron 10.0%
!!! ACAATTTCTTTATTTATTTT+AGG - Chr7:7959868-7959887 MsG0780036425.01.T01:intron 10.0%
!!! ATTAATAGATTTGTTATTTA+AGG - Chr7:7962899-7962918 MsG0780036425.01.T01:intron 10.0%
!!! GTAAATATATATTTTTTGTA+GGG - Chr7:7960351-7960370 MsG0780036425.01.T01:intron 10.0%
!!! TGTAAATATATATTTTTTGT+AGG - Chr7:7960350-7960369 MsG0780036425.01.T01:intron 10.0%
!!! TTAGTAATTTTTTTTTAGTA+TGG - Chr7:7961321-7961340 MsG0780036425.01.T01:intron 10.0%
!!! TTTAAAGTTTATTTACAATT+TGG - Chr7:7962221-7962240 MsG0780036425.01.T01:intron 10.0%
!! ACTAAACTTGAAAATAATAA+GGG - Chr7:7962922-7962941 MsG0780036425.01.T01:intron 15.0%
!! AGAAATCTACAAAAATAAAT+CGG + Chr7:7963476-7963495 None:intergenic 15.0%
!! ATCTCTACTAAATTTAAATT+TGG - Chr7:7960030-7960049 MsG0780036425.01.T01:intron 15.0%
!! GTGTCAAAAAAAATAAATTA+AGG + Chr7:7959822-7959841 None:intergenic 15.0%
!! TCCAAAAATTAAAATGAAAA+AGG + Chr7:7959749-7959768 None:intergenic 15.0%
!! TTTCTTAAATACATTGTTTA+AGG - Chr7:7961294-7961313 MsG0780036425.01.T01:intron 15.0%
!! TTTCTTTATATAAAAGAAGT+TGG + Chr7:7962509-7962528 None:intergenic 15.0%
!!! AACTTTAAAAGAATATAACA+TGG + Chr7:7962594-7962613 None:intergenic 15.0%
!!! ACCTTTTTCATTTTAATTTT+TGG - Chr7:7959745-7959764 MsG0780036425.01.T01:CDS 15.0%
!!! ATGAAAAAGGTATTAAAAAA+TGG + Chr7:7959736-7959755 None:intergenic 15.0%
!!! ATTGATGGATTTTTTTTTTT+AGG + Chr7:7962852-7962871 None:intergenic 15.0%
!!! ATTTTGAGATAATTTTTGTA+CGG + Chr7:7960129-7960148 None:intergenic 15.0%
!!! GAATAGAAAAGTTAAATTTT+AGG + Chr7:7961661-7961680 None:intergenic 15.0%
!!! TAAGTTTTTGAACAATTTTT+TGG - Chr7:7960072-7960091 MsG0780036425.01.T01:intron 15.0%
!!! TTCTTTATTTATTTTAGGAA+GGG - Chr7:7959873-7959892 MsG0780036425.01.T01:intron 15.0%
!!! TTTCTTTATTTATTTTAGGA+AGG - Chr7:7959872-7959891 MsG0780036425.01.T01:intron 15.0%
!! AAGATAAAAGCAACAAAAAT+TGG + Chr7:7960165-7960184 None:intergenic 20.0%
!! ACAAAATTATCAACAACAAA+TGG + Chr7:7959779-7959798 None:intergenic 20.0%
!! CCTATATATAAGCTAAAAAA+AGG + Chr7:7963327-7963346 None:intergenic 20.0%
!! GACTAAACTTGAAAATAATA+AGG - Chr7:7962921-7962940 MsG0780036425.01.T01:intron 20.0%
!! TATAAGTTTCCAATTCTATA+GGG - Chr7:7960411-7960430 MsG0780036425.01.T01:intron 20.0%
!! TTATAAGTTTCCAATTCTAT+AGG - Chr7:7960410-7960429 MsG0780036425.01.T01:intron 20.0%
!!! AAAACATATTTAACCCTTTT+AGG - Chr7:7960438-7960457 MsG0780036425.01.T01:intron 20.0%
!!! AAAAGGGTTAAATATGTTTT+TGG + Chr7:7960438-7960457 None:intergenic 20.0%
!!! AAACAAACTTTATTTTAGCA+TGG - Chr7:7960315-7960334 MsG0780036425.01.T01:intron 20.0%
!!! AACAAACAAAAAAAGTACAT+TGG - Chr7:7963219-7963238 MsG0780036425.01.T01:intron 20.0%
!!! ACAAACAAAAAAAGTACATT+GGG - Chr7:7963220-7963239 MsG0780036425.01.T01:intron 20.0%
!!! CCTTTTTTTAGCTTATATAT+AGG - Chr7:7963324-7963343 MsG0780036425.01.T01:intron 20.0%
!!! CTATTTTATCTCAACAAAAA+CGG + Chr7:7961843-7961862 None:intergenic 20.0%
!!! GTGAAATAATAACAACATTT+TGG - Chr7:7963275-7963294 MsG0780036425.01.T01:intron 20.0%
!!! GTTTTTGTTGAGATAAAATA+GGG - Chr7:7961842-7961861 MsG0780036425.01.T01:intron 20.0%
!!! TAAGTTTAGAACATTTCAAA+AGG + Chr7:7960261-7960280 None:intergenic 20.0%
!!! TGAAATTTGAAGTTAAAAGT+TGG + Chr7:7959536-7959555 None:intergenic 20.0%
! AAAGATAATAACACTTGACT+AGG + Chr7:7963513-7963532 None:intergenic 25.0%
! AAATAGTTCAAGATTCGATT+TGG + Chr7:7963144-7963163 None:intergenic 25.0%
! AGTTTATTTACAATTTGGGT+TGG - Chr7:7962226-7962245 MsG0780036425.01.T01:intron 25.0%
! ATCGTACAAAAATATGAAGA+AGG - Chr7:7960974-7960993 MsG0780036425.01.T01:intron 25.0%
! CAGAACCCTATATTATATAT+AGG - Chr7:7961806-7961825 MsG0780036425.01.T01:intron 25.0%
! GCTTGTTTGACATAAATAAA+AGG + Chr7:7960952-7960971 None:intergenic 25.0%
! GTAGATTTCTGTGAAAATAT+TGG - Chr7:7963486-7963505 MsG0780036425.01.T01:intron 25.0%
! TACATCCTGTAAACAATAAA+GGG + Chr7:7963562-7963581 None:intergenic 25.0%
! TTAAAAAATGGTTACCTCAT+AGG + Chr7:7959724-7959743 None:intergenic 25.0%
! TTACATCCTGTAAACAATAA+AGG + Chr7:7963563-7963582 None:intergenic 25.0%
!! ATAATGGAATAAAATGGTGT+TGG + Chr7:7962772-7962791 None:intergenic 25.0%
!! ATTTAAAGCAAAGCTTTGTA+TGG + Chr7:7962031-7962050 None:intergenic 25.0%
!! CGTTTTTGTTGAGATAAAAT+AGG - Chr7:7961841-7961860 MsG0780036425.01.T01:intron 25.0%
!! GAAATGTTCTAAACTTATCT+CGG - Chr7:7960264-7960283 MsG0780036425.01.T01:intron 25.0%
!! TAGGAATTGGTTTCAAAAAA+AGG + Chr7:7959705-7959724 None:intergenic 25.0%
!!! ATCTTGAACTATTTTTGAGT+TGG - Chr7:7963150-7963169 MsG0780036425.01.T01:intron 25.0%
!!! CTGAGTGCATAATTTTTTTA+AGG + Chr7:7960005-7960024 None:intergenic 25.0%
!!! TATTTAACGAGCTTAGTTTT+CGG - Chr7:7963082-7963101 MsG0780036425.01.T01:intron 25.0%
!!! TCTTTTAAAGTTTTCGATGT+GGG - Chr7:7962602-7962621 MsG0780036425.01.T01:intron 25.0%
!!! TTCTTTTAAAGTTTTCGATG+TGG - Chr7:7962601-7962620 MsG0780036425.01.T01:intron 25.0%
AATCAGATCTGAAAAAAGTG+TGG - Chr7:7960998-7961017 MsG0780036425.01.T01:intron 30.0%
ACAAAAAACACCAATACACT+AGG - Chr7:7962475-7962494 MsG0780036425.01.T01:intron 30.0%
ACATATGCTCATTCCTAAAA+GGG + Chr7:7960454-7960473 None:intergenic 30.0%
AGTGTATTCTTGATTGGATT+GGG - Chr7:7961079-7961098 MsG0780036425.01.T01:intron 30.0%
ATAGCCTTTAAATACCAGTA+CGG + Chr7:7963358-7963377 None:intergenic 30.0%
ATATAATATAGGGTTCTGCA+TGG + Chr7:7961804-7961823 None:intergenic 30.0%
ATATGCTATATGTTGCATGA+TGG - Chr7:7962963-7962982 MsG0780036425.01.T01:intron 30.0%
ATGAAATTGCTCTATTTGGT+AGG + Chr7:7962745-7962764 None:intergenic 30.0%
GAAAGATTGATTAGAGATCT+GGG - Chr7:7960891-7960910 MsG0780036425.01.T01:intron 30.0%
GATGTAGAATTTGACTCTAT+TGG - Chr7:7963615-7963634 MsG0780036425.01.T01:intron 30.0%
GGTAATTAATTCGTTGAACT+TGG + Chr7:7963123-7963142 None:intergenic 30.0%
TAGTGTATTCTTGATTGGAT+TGG - Chr7:7961078-7961097 MsG0780036425.01.T01:intron 30.0%
TATGTGTAGTTTGACTCATT+TGG + Chr7:7963044-7963063 None:intergenic 30.0%
TGAAAGATTGATTAGAGATC+TGG - Chr7:7960890-7960909 MsG0780036425.01.T01:intron 30.0%
TGAGATGAAATTGCTCTATT+TGG + Chr7:7962749-7962768 None:intergenic 30.0%
TGTAAGCTAATGTCATTGTT+GGG + Chr7:7961118-7961137 None:intergenic 30.0%
TTGTATGATAGATTAGCAAG+CGG + Chr7:7962689-7962708 None:intergenic 30.0%
TTGTTTACAGGATGTAATAG+CGG - Chr7:7963566-7963585 MsG0780036425.01.T01:intron 30.0%
TTTGCTCTGTTGTAAAATCT+TGG - Chr7:7960797-7960816 MsG0780036425.01.T01:intron 30.0%
! AGAAATTAATGAGAGAGCAT+TGG - Chr7:7962524-7962543 MsG0780036425.01.T01:intron 30.0%
! GGAGGAATAATGGAATAAAA+TGG + Chr7:7962778-7962797 None:intergenic 30.0%
! TTGAGATAATTTTTGTACGG+AGG + Chr7:7960126-7960145 None:intergenic 30.0%
!! TTCATTTTGACCGTGAAAAA+AGG + Chr7:7960854-7960873 None:intergenic 30.0%
!! TTTTAGGAATGAGCATATGT+CGG - Chr7:7960454-7960473 MsG0780036425.01.T01:intron 30.0%
!!! GAACTATTTTTGAGTTGGAT+TGG - Chr7:7963155-7963174 MsG0780036425.01.T01:intron 30.0%
!!! TTCAGTTTTCATTGGTTTGA+CGG + Chr7:7960494-7960513 None:intergenic 30.0%
!!! TTTTGAAACCAATTCCTATG+AGG - Chr7:7959707-7959726 MsG0780036425.01.T01:CDS 30.0%
AAACTTCTTGGACCACAAAA+GGG - Chr7:7963717-7963736 MsG0780036425.01.T01:CDS 35.0%
AAAGAGATTGCTAAACGTCT+TGG - Chr7:7959675-7959694 MsG0780036425.01.T01:CDS 35.0%
AAGCATAAAACCATCCTATG+CGG - Chr7:7963381-7963400 MsG0780036425.01.T01:intron 35.0%
AAGTTGCATAGAGCAACAAA+AGG - Chr7:7961704-7961723 MsG0780036425.01.T01:intron 35.0%
AATGGTTACCTCATAGGAAT+TGG + Chr7:7959718-7959737 None:intergenic 35.0%
ACGGTCAAAATGAAGAAGAA+GGG - Chr7:7960860-7960879 MsG0780036425.01.T01:intron 35.0%
AGCATTAAAGCAGCCATTTA+AGG - Chr7:7961873-7961892 MsG0780036425.01.T01:intron 35.0%
AGTACATTGGGTAGTTAAGA+AGG - Chr7:7963232-7963251 MsG0780036425.01.T01:intron 35.0%
AGTCAAATTCTACATCGATG+TGG + Chr7:7963611-7963630 None:intergenic 35.0%
ATCTCATAACTAGAGCAACT+CGG - Chr7:7962276-7962295 MsG0780036425.01.T01:intron 35.0%
ATTAGTCGTTCCTTATGCAT+AGG - Chr7:7962088-7962107 MsG0780036425.01.T01:intron 35.0%
CACATTAATGAAAACTGCTC+CGG + Chr7:7963808-7963827 None:intergenic 35.0%
CTGTAAGCTAATGTCATTGT+TGG + Chr7:7961119-7961138 None:intergenic 35.0%
GACATATGCTCATTCCTAAA+AGG + Chr7:7960455-7960474 None:intergenic 35.0%
GCAGATTTCATAACACACTT+TGG + Chr7:7962637-7962656 None:intergenic 35.0%
GTAATTAGGCCTAGAATTAG+TGG + Chr7:7960525-7960544 None:intergenic 35.0%
GTAGAATTTGACTCTATTGG+TGG - Chr7:7963618-7963637 MsG0780036425.01.T01:intron 35.0%
TATCAAACCTGATGAGCAAA+TGG - Chr7:7963832-7963851 MsG0780036425.01.T01:five_prime_UTR 35.0%
TGAATTTGAGTCAAGCTTCT+AGG + Chr7:7962321-7962340 None:intergenic 35.0%
TGGACTAACCCCATAAAAAT+TGG + Chr7:7962011-7962030 None:intergenic 35.0%
TTAAATACCAGTACGGAACA+TGG + Chr7:7963351-7963370 None:intergenic 35.0%
TTAGTCGTTCCTTATGCATA+GGG - Chr7:7962089-7962108 MsG0780036425.01.T01:intron 35.0%
TTCTTTCGTTCAAAGGACAT+GGG - Chr7:7959564-7959583 MsG0780036425.01.T01:CDS 35.0%
TTGTTCCTTCTTTCGTTCAA+AGG - Chr7:7959557-7959576 MsG0780036425.01.T01:CDS 35.0%
! AGATCTGAAATGAGACAGTA+GGG - Chr7:7961048-7961067 MsG0780036425.01.T01:intron 35.0%
! AGCGGATACAATTTTCTTGA+AGG + Chr7:7962671-7962690 None:intergenic 35.0%
! AGGGTTAGTGTATTCTTGAT+TGG - Chr7:7961073-7961092 MsG0780036425.01.T01:intron 35.0%
! ATTATTAACGAGCTGACTCA+TGG - Chr7:7963017-7963036 MsG0780036425.01.T01:intron 35.0%
! GCGGATACAATTTTCTTGAA+GGG + Chr7:7962670-7962689 None:intergenic 35.0%
! TACACACTTACCAAGCTTTT+GGG + Chr7:7963868-7963887 None:intergenic 35.0%
! TGTTCCGTACTGGTATTTAA+AGG - Chr7:7963351-7963370 MsG0780036425.01.T01:intron 35.0%
! TTTGTAGTTTCAGGTGTGAA+GGG + Chr7:7962799-7962818 None:intergenic 35.0%
!! TTTTGTAGTTTCAGGTGTGA+AGG + Chr7:7962800-7962819 None:intergenic 35.0%
!!! GTTTTTGGTCCCTATAGAAT+TGG + Chr7:7960423-7960442 None:intergenic 35.0%
!!! TGGTTTTATTCAAAAGCTCC+AGG + Chr7:7963409-7963428 None:intergenic 35.0%
!!! TGTGTCGATTTTGTAGTTTC+AGG + Chr7:7962808-7962827 None:intergenic 35.0%
!!! TTGGTTTTGAGACAAGTTGT+AGG - Chr7:7961777-7961796 MsG0780036425.01.T01:intron 35.0%
AACCCCATAAAAATTGGCAC+CGG + Chr7:7962005-7962024 None:intergenic 40.0%
AACCTGATGAGCAAATGGTT+CGG - Chr7:7963837-7963856 MsG0780036425.01.T01:five_prime_UTR 40.0%
AACTTCTTGGACCACAAAAG+GGG - Chr7:7963718-7963737 MsG0780036425.01.T01:CDS 40.0%
AATTCTACATCGATGTGGTC+AGG + Chr7:7963606-7963625 None:intergenic 40.0%
ACTCGATGTCTAGTCTAAGT+AGG + Chr7:7963193-7963212 None:intergenic 40.0%
AGCATAAAACCATCCTATGC+GGG - Chr7:7963382-7963401 MsG0780036425.01.T01:intron 40.0%
ATAAGGAACGACTAATCCAG+GGG + Chr7:7962084-7962103 None:intergenic 40.0%
ATGATTCACGGTTCAGGTAA+CGG + Chr7:7959644-7959663 None:intergenic 40.0%
ATTAGGCCTAGAATTAGTGG+CGG + Chr7:7960522-7960541 None:intergenic 40.0%
ATTGCTCTATTTGGTAGGCA+TGG + Chr7:7962740-7962759 None:intergenic 40.0%
CAAACTTCTTGGACCACAAA+AGG - Chr7:7963716-7963735 MsG0780036425.01.T01:CDS 40.0%
CACGGTCAAAATGAAGAAGA+AGG - Chr7:7960859-7960878 MsG0780036425.01.T01:intron 40.0%
CATAAGGAACGACTAATCCA+GGG + Chr7:7962085-7962104 None:intergenic 40.0%
CATATCTCTGTTGTCAAACG+CGG - Chr7:7960617-7960636 MsG0780036425.01.T01:intron 40.0%
CATGTCCTTTGAACGAAAGA+AGG + Chr7:7959565-7959584 None:intergenic 40.0%
CGGTCAAAATGAAGAAGAAG+GGG - Chr7:7960861-7960880 MsG0780036425.01.T01:intron 40.0%
CTCGATGTCTAGTCTAAGTA+GGG + Chr7:7963192-7963211 None:intergenic 40.0%
CTTCTTTCGTTCAAAGGACA+TGG - Chr7:7959563-7959582 MsG0780036425.01.T01:CDS 40.0%
CTTTAAATGACCCTCTGCTA+GGG - Chr7:7962043-7962062 MsG0780036425.01.T01:intron 40.0%
GAAATGAGACAGTAGGGTTA+GGG - Chr7:7961054-7961073 MsG0780036425.01.T01:intron 40.0%
TCATTTCAGCCCTATGCATA+AGG + Chr7:7962101-7962120 None:intergenic 40.0%
TCTTACGCAGACCACAAATT+CGG - Chr7:7959486-7959505 MsG0780036425.01.T01:CDS 40.0%
TGAAATGAGACAGTAGGGTT+AGG - Chr7:7961053-7961072 MsG0780036425.01.T01:intron 40.0%
TTACCTGAACCGTGAATCAT+CGG - Chr7:7959644-7959663 MsG0780036425.01.T01:CDS 40.0%
TTGCGCCCTTTATTGTTTAC+AGG - Chr7:7963554-7963573 MsG0780036425.01.T01:intron 40.0%
TTTAAATGACCCTCTGCTAG+GGG - Chr7:7962044-7962063 MsG0780036425.01.T01:intron 40.0%
! ATGTAGCTCTGTTGTCAAAG+CGG + Chr7:7961626-7961645 None:intergenic 40.0%
! CAGATCTGAAAAAAGTGTGG+CGG - Chr7:7961001-7961020 MsG0780036425.01.T01:intron 40.0%
! CAGATCTGAAATGAGACAGT+AGG - Chr7:7961047-7961066 MsG0780036425.01.T01:intron 40.0%
! CGACTTGATAAGGATTTGCT+TGG - Chr7:7962142-7962161 MsG0780036425.01.T01:intron 40.0%
! CGGCAGTTTTCAGTTTTCAT+TGG + Chr7:7960502-7960521 None:intergenic 40.0%
! CTACACACTTACCAAGCTTT+TGG + Chr7:7963869-7963888 None:intergenic 40.0%
! CTTGATTGGATTGGGTCATT+GGG - Chr7:7961087-7961106 MsG0780036425.01.T01:intron 40.0%
! GATTTGCTTGGCTTGAAACT+CGG - Chr7:7962154-7962173 MsG0780036425.01.T01:intron 40.0%
! TCTTGATTGGATTGGGTCAT+TGG - Chr7:7961086-7961105 MsG0780036425.01.T01:intron 40.0%
! TTTTCGCATGGCAAACTTCT+TGG - Chr7:7963705-7963724 MsG0780036425.01.T01:CDS 40.0%
!! ACAATTTGGGTTGGCTTGTT+AGG - Chr7:7962235-7962254 MsG0780036425.01.T01:intron 40.0%
!! GAATGAGCATATGTCGGTTT+GGG - Chr7:7960460-7960479 MsG0780036425.01.T01:intron 40.0%
!!! GCATAGGATGGTTTTATGCT+TGG + Chr7:7963382-7963401 None:intergenic 40.0%
!!! TCTTCGTCGTCCTTTTTTCA+CGG - Chr7:7960841-7960860 MsG0780036425.01.T01:intron 40.0%
AAAACAAGTCTGGTCGTTGC+AGG + Chr7:7963689-7963708 None:intergenic 45.0%
AAACAAGTCTGGTCGTTGCA+GGG + Chr7:7963688-7963707 None:intergenic 45.0%
AAACTGCCGCCACTAATTCT+AGG - Chr7:7960513-7960532 MsG0780036425.01.T01:intron 45.0%
AAAGCTATTGCCAAGGAGTC+CGG - Chr7:7963786-7963805 MsG0780036425.01.T01:five_prime_UTR 45.0%
AAAGGACGACGAAGAGAGAA+CGG + Chr7:7960836-7960855 None:intergenic 45.0%
ACAAGCACGGGTAAGTACAT+TGG - Chr7:7961896-7961915 MsG0780036425.01.T01:intron 45.0%
ACCTGATGAGCAAATGGTTC+GGG - Chr7:7963838-7963857 MsG0780036425.01.T01:five_prime_UTR 45.0%
ACTTCTTGGACCACAAAAGG+GGG - Chr7:7963719-7963738 MsG0780036425.01.T01:CDS 45.0%
AGCCATTTAAGGACAAGCAC+GGG - Chr7:7961884-7961903 MsG0780036425.01.T01:intron 45.0%
AGGCATGGTGGTATGAGATA+AGG + Chr7:7962725-7962744 None:intergenic 45.0%
AGGTGTGAAGGGAGGAATAA+TGG + Chr7:7962788-7962807 None:intergenic 45.0%
ATGTCTAGTCTAAGTAGGGC+TGG + Chr7:7963188-7963207 None:intergenic 45.0%
CAAGCACGGGTAAGTACATT+GGG - Chr7:7961897-7961916 MsG0780036425.01.T01:intron 45.0%
CAGCCATTTAAGGACAAGCA+CGG - Chr7:7961883-7961902 MsG0780036425.01.T01:intron 45.0%
CGTAATCTTTGTGTGCGTGA+GGG - Chr7:7963298-7963317 MsG0780036425.01.T01:intron 45.0%
CTAGGCCTAATTACGACTTG+CGG - Chr7:7960531-7960550 MsG0780036425.01.T01:intron 45.0%
GCATAAGGAACGACTAATCC+AGG + Chr7:7962086-7962105 None:intergenic 45.0%
GGAGCTACAACCTAGTGTAT+TGG + Chr7:7962488-7962507 None:intergenic 45.0%
GTAATCTTTGTGTGCGTGAG+GGG - Chr7:7963299-7963318 MsG0780036425.01.T01:intron 45.0%
GTATCCAACCACCGAATTTG+TGG + Chr7:7959500-7959519 None:intergenic 45.0%
TACCCGTGCTTGTCCTTAAA+TGG + Chr7:7961889-7961908 None:intergenic 45.0%
TAGCCTTCTCCGATGATTCA+CGG + Chr7:7959656-7959675 None:intergenic 45.0%
TAGGCCTAATTACGACTTGC+GGG - Chr7:7960532-7960551 MsG0780036425.01.T01:intron 45.0%
TATAGGACCATGTTCCGTAC+TGG - Chr7:7963341-7963360 MsG0780036425.01.T01:intron 45.0%
TTGCCATGCGAAAACAAGTC+TGG + Chr7:7963699-7963718 None:intergenic 45.0%
TTTGAACACGAGACCTTGAG+AGG + Chr7:7961978-7961997 None:intergenic 45.0%
! GCTTTAAATGACCCTCTGCT+AGG - Chr7:7962042-7962061 MsG0780036425.01.T01:intron 45.0%
! GGAATGAGCATATGTCGGTT+TGG - Chr7:7960459-7960478 MsG0780036425.01.T01:intron 45.0%
! TACGCACCGCGTCAATTTTT+GGG - Chr7:7961578-7961597 MsG0780036425.01.T01:intron 45.0%
! TCGAAGAGCTCGACTTGATA+AGG - Chr7:7962132-7962151 MsG0780036425.01.T01:intron 45.0%
!! CCTCCGGTGCCAATTTTTAT+GGG - Chr7:7961999-7962018 MsG0780036425.01.T01:intron 45.0%
!! CTCCGGTGCCAATTTTTATG+GGG - Chr7:7962000-7962019 MsG0780036425.01.T01:intron 45.0%
!! GTAGAATGGGTGGGTTGTTT+CGG - Chr7:7960570-7960589 MsG0780036425.01.T01:intron 45.0%
!! TAGAATGGGTGGGTTGTTTC+GGG - Chr7:7960571-7960590 MsG0780036425.01.T01:intron 45.0%
!! TCCTCCGGTGCCAATTTTTA+TGG - Chr7:7961998-7962017 MsG0780036425.01.T01:intron 45.0%
AACAAGTCTGGTCGTTGCAG+GGG + Chr7:7963687-7963706 None:intergenic 50.0%
ACATTGGGTAGCAACCCACA+TGG - Chr7:7961912-7961931 MsG0780036425.01.T01:intron 50.0%
AGTCACGCGTTTGTGGAAAG+CGG - Chr7:7960704-7960723 MsG0780036425.01.T01:intron 50.0%
ATTCCAATGTCCCCTAGCAG+AGG + Chr7:7962057-7962076 None:intergenic 50.0%
CAAAAGGGGGTCCTGTTGTA+TGG - Chr7:7963732-7963751 MsG0780036425.01.T01:CDS 50.0%
CATTGGGTAGCAACCCACAT+GGG - Chr7:7961913-7961932 MsG0780036425.01.T01:intron 50.0%
CCTGATGAGCAAATGGTTCG+GGG - Chr7:7963839-7963858 MsG0780036425.01.T01:five_prime_UTR 50.0%
CTGCTAGGGGACATTGGAAT+TGG - Chr7:7962057-7962076 MsG0780036425.01.T01:intron 50.0%
CTGTTGTCAAAGCGGAAACG+CGG + Chr7:7961618-7961637 None:intergenic 50.0%
CTTTCCACAAACGCGTGACT+TGG + Chr7:7960704-7960723 None:intergenic 50.0%
GAACCGTGAATCATCGGAGA+AGG - Chr7:7959650-7959669 MsG0780036425.01.T01:CDS 50.0%
GCGTAATCTTTGTGTGCGTG+AGG - Chr7:7963297-7963316 MsG0780036425.01.T01:intron 50.0%
GCTCGCAAAAGCTATTGCCA+AGG - Chr7:7963779-7963798 MsG0780036425.01.T01:five_prime_UTR 50.0%
GCTCTATTTGGTAGGCATGG+TGG + Chr7:7962737-7962756 None:intergenic 50.0%
GGTCTCGTGTTCAAATCCTC+CGG - Chr7:7961983-7962002 MsG0780036425.01.T01:intron 50.0%
GTCGCGAATACGTTTCTGTG+AGG - Chr7:7960740-7960759 MsG0780036425.01.T01:intron 50.0%
TACGCAGACCACAAATTCGG+TGG - Chr7:7959489-7959508 MsG0780036425.01.T01:CDS 50.0%
TACGTTTCTGTGAGGCAGAG+CGG - Chr7:7960748-7960767 MsG0780036425.01.T01:intron 50.0%
TCTCCGATGATTCACGGTTC+AGG + Chr7:7959650-7959669 None:intergenic 50.0%
TTCCAATGTCCCCTAGCAGA+GGG + Chr7:7962056-7962075 None:intergenic 50.0%
! ACGCACCGCGTCAATTTTTG+GGG - Chr7:7961579-7961598 MsG0780036425.01.T01:intron 50.0%
! CAAAACGCGCTGCTTTGAAC+CGG + Chr7:7960781-7960800 None:intergenic 50.0%
! CAGACCACAAATTCGGTGGT+TGG - Chr7:7959493-7959512 MsG0780036425.01.T01:CDS 50.0%
! CCCATAAAAATTGGCACCGG+AGG + Chr7:7962002-7962021 None:intergenic 50.0%
! CTGAAAAAAGTGTGGCGGCT+GGG - Chr7:7961006-7961025 MsG0780036425.01.T01:intron 50.0%
! GGCAATAGCTTTTGCGAGCA+TGG + Chr7:7963778-7963797 None:intergenic 50.0%
! GTACGCACCGCGTCAATTTT+TGG - Chr7:7961577-7961596 MsG0780036425.01.T01:intron 50.0%
! GTAGTTTCAGGTGTGAAGGG+AGG + Chr7:7962796-7962815 None:intergenic 50.0%
! TACAACAGGACCCCCTTTTG+TGG + Chr7:7963732-7963751 None:intergenic 50.0%
! TCTGAAAAAAGTGTGGCGGC+TGG - Chr7:7961005-7961024 MsG0780036425.01.T01:intron 50.0%
! TTGGATTGGGTCATTGGGCT+AGG - Chr7:7961092-7961111 MsG0780036425.01.T01:intron 50.0%
!! CGACCAGACTTGTTTTCGCA+TGG - Chr7:7963693-7963712 MsG0780036425.01.T01:CDS 50.0%
!! CGAGCTTAGTTTTCGGCTCA+TGG - Chr7:7963089-7963108 MsG0780036425.01.T01:intron 50.0%
AAAAGCTCCAGGTCCCGCAT+AGG + Chr7:7963398-7963417 None:intergenic 55.0%
AAACCATCCTATGCGGGACC+TGG - Chr7:7963388-7963407 MsG0780036425.01.T01:intron 55.0%
AAATTGACGCGGTGCGTACG+CGG + Chr7:7961576-7961595 None:intergenic 55.0%
ACCCACATGGGCAGACATAG+CGG - Chr7:7961925-7961944 MsG0780036425.01.T01:intron 55.0%
ACCGCTATGTCTGCCCATGT+GGG + Chr7:7961929-7961948 None:intergenic 55.0%
ACGTTTCTGTGAGGCAGAGC+GGG - Chr7:7960749-7960768 MsG0780036425.01.T01:intron 55.0%
AGGTGGCAGGTAGAATGGGT+GGG - Chr7:7960561-7960580 MsG0780036425.01.T01:intron 55.0%
AGTGTTGTCGTACGCGGCTA+AGG - Chr7:7959587-7959606 MsG0780036425.01.T01:CDS 55.0%
ATGGGCAGACATAGCGGTGT+AGG - Chr7:7961931-7961950 MsG0780036425.01.T01:intron 55.0%
CATTCTACCTGCCACCTGTG+CGG + Chr7:7960558-7960577 None:intergenic 55.0%
CCCCGAACCATTTGCTCATC+AGG + Chr7:7963842-7963861 None:intergenic 55.0%
CTGTACTGCGCTTTGGTCAC+GGG - Chr7:7959615-7959634 MsG0780036425.01.T01:CDS 55.0%
CTTGGAGTGTGCTCCTCTCA+AGG - Chr7:7961962-7961981 MsG0780036425.01.T01:intron 55.0%
GAAAACTGCTCCGGACTCCT+TGG + Chr7:7963799-7963818 None:intergenic 55.0%
GCACAGGTGGCAGGTAGAAT+GGG - Chr7:7960557-7960576 MsG0780036425.01.T01:intron 55.0%
GCTACCAAGTCACGCGTTTG+TGG - Chr7:7960697-7960716 MsG0780036425.01.T01:intron 55.0%
GCTGTACTGCGCTTTGGTCA+CGG - Chr7:7959614-7959633 MsG0780036425.01.T01:CDS 55.0%
GGACATTGGAATTGGTCCCC+TGG - Chr7:7962065-7962084 MsG0780036425.01.T01:intron 55.0%
GGCCACCCCAAAAATTGACG+CGG + Chr7:7961587-7961606 None:intergenic 55.0%
GTCACGCGTTTGTGGAAAGC+GGG - Chr7:7960705-7960724 MsG0780036425.01.T01:intron 55.0%
GTCCTGTTGTATGGACCTCC+TGG - Chr7:7963741-7963760 MsG0780036425.01.T01:CDS 55.0%
GTGGAAAGCGGGTCAATAGC+AGG - Chr7:7960716-7960735 MsG0780036425.01.T01:intron 55.0%
TGCCAGGAGGTCCATACAAC+AGG + Chr7:7963746-7963765 None:intergenic 55.0%
TGTATGGACCTCCTGGCACT+GGG - Chr7:7963748-7963767 MsG0780036425.01.T01:CDS 55.0%
TTCGGGGATGCCCAAAAGCT+TGG - Chr7:7963855-7963874 MsG0780036425.01.T01:five_prime_UTR 55.0%
TTGTATGGACCTCCTGGCAC+TGG - Chr7:7963747-7963766 MsG0780036425.01.T01:CDS 55.0%
TTGTCAAACGCGGCTGCTCT+CGG - Chr7:7960627-7960646 MsG0780036425.01.T01:intron 55.0%
! AGCATGGTTTTCCCAGTGCC+AGG + Chr7:7963762-7963781 None:intergenic 55.0%
! ATGGTTTTCCCAGTGCCAGG+AGG + Chr7:7963759-7963778 None:intergenic 55.0%
! CTTGAGAGGAGCACACTCCA+AGG + Chr7:7961964-7961983 None:intergenic 55.0%
!! CACCGCGTCAATTTTTGGGG+TGG - Chr7:7961582-7961601 MsG0780036425.01.T01:intron 55.0%
!! CATGGGAGTGTTGTCGTACG+CGG - Chr7:7959581-7959600 MsG0780036425.01.T01:CDS 55.0%
!! GACTTGGTAGCGTTGTGACG+CGG + Chr7:7960688-7960707 None:intergenic 55.0%
!!! GTGACGCGGCTCCTTGTTTT+TGG + Chr7:7960674-7960693 None:intergenic 55.0%
AATTGACGCGGTGCGTACGC+GGG + Chr7:7961575-7961594 None:intergenic 60.0%
CACCGCTATGTCTGCCCATG+TGG + Chr7:7961930-7961949 None:intergenic 60.0%
CAGGTGGCAGGTAGAATGGG+TGG - Chr7:7960560-7960579 MsG0780036425.01.T01:intron 60.0%
CGCACAGGTGGCAGGTAGAA+TGG - Chr7:7960556-7960575 MsG0780036425.01.T01:intron 60.0%
GACCCTCTGCTAGGGGACAT+TGG - Chr7:7962051-7962070 MsG0780036425.01.T01:intron 60.0%
GCGGCCCGCAAGTCGTAATT+AGG + Chr7:7960539-7960558 None:intergenic 60.0%
GCGGCTGGGAGAGAGAAAGT+AGG - Chr7:7961020-7961039 MsG0780036425.01.T01:intron 60.0%
GCGGGCGCTATTACATGACG+CGG + Chr7:7961557-7961576 None:intergenic 60.0%
GCGGTGTAGGCTTGAGACCT+TGG - Chr7:7961944-7961963 MsG0780036425.01.T01:intron 60.0%
GTTGTCGTACGCGGCTAAGG+CGG - Chr7:7959590-7959609 MsG0780036425.01.T01:CDS 60.0%
GAGGCAGAGCGGGTCGAAAC+CGG - Chr7:7960759-7960778 MsG0780036425.01.T01:intron 65.0%
GCGCGGAGCGGCCAAAAACA+AGG - Chr7:7960660-7960679 MsG0780036425.01.T01:intron 65.0%
GCTCCAGGTCCCGCATAGGA+TGG + Chr7:7963394-7963413 None:intergenic 65.0%
GTCAAAGCGGAAACGCGGCG+TGG + Chr7:7961613-7961632 None:intergenic 65.0%
TTACGACTTGCGGGCCGCAC+AGG - Chr7:7960541-7960560 MsG0780036425.01.T01:intron 65.0%
CTCTCGGCGCTATCGTGGCG+CGG - Chr7:7960643-7960662 MsG0780036425.01.T01:intron 70.0%
GGCGGCGCTGTACTGCGCTT+TGG - Chr7:7959608-7959627 MsG0780036425.01.T01:CDS 70.0%
GGCTGCTCTCGGCGCTATCG+TGG - Chr7:7960638-7960657 MsG0780036425.01.T01:intron 70.0%
AGCGGAAACGCGGCGTGGCG+CGG + Chr7:7961608-7961627 None:intergenic 75.0%
CGACTTGCGGGCCGCACAGG+TGG - Chr7:7960544-7960563 MsG0780036425.01.T01:intron 75.0%
GGCGCTATCGTGGCGCGGAG+CGG - Chr7:7960648-7960667 MsG0780036425.01.T01:intron 75.0%
TTGCGGGCCGCACAGGTGGC+AGG - Chr7:7960548-7960567 MsG0780036425.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 7959448 7963911 7959448 ID=MsG0780036425.01;Name=MsG0780036425.01
Chr7 mRNA 7959448 7963911 7959448 ID=MsG0780036425.01.T01;Parent=MsG0780036425.01;Name=MsG0780036425.01.T01;_AED=0.50;_eAED=0.50;_QI=134|1|0.5|1|1|1|2|0|160
Chr7 exon 7959448 7959783 7959448 ID=MsG0780036425.01.T01:exon:4202;Parent=MsG0780036425.01.T01
Chr7 exon 7963631 7963911 7963631 ID=MsG0780036425.01.T01:exon:4201;Parent=MsG0780036425.01.T01
Chr7 five_prime_UTR 7963778 7963911 7963778 ID=MsG0780036425.01.T01:five_prime_utr;Parent=MsG0780036425.01.T01
Chr7 CDS 7963631 7963777 7963631 ID=MsG0780036425.01.T01:cds;Parent=MsG0780036425.01.T01
Chr7 CDS 7959448 7959783 7959448 ID=MsG0780036425.01.T01:cds;Parent=MsG0780036425.01.T01
Gene Sequence

>MsG0780036425.01.T01

ATGGGAGTGTTGTCGTACGCGGCTAAGGCGGCGCTGTACTGCGCTTTGGTCACGGGTTTCCGTTACCTGAACCGTGAATCATCGGAGAAGGCTAAAGAGATTGCTAAACGTCTTGGTCGTCCTTTTTTTGAAACCAATTCCTATGAGGATGTAATAGCGGATGATGTTATAAATCCTGACCACATCGATGTAGAATTTGACTCTATTGGTGGTCTTGAAACGATCAAAAAAACTTTGTTTGAGCTTGTTATTCTACCCCTGCAACGACCAGACTTGTTTTCGCATGGCAAACTTCTTGGACCACAAAAGGGGGTCCTGTTGTATGGACCTCCTGGCACTGGGAAAACCATGCTCGCAAAAGCTATTGCCAAGGAGTCCGGAGCAGTTTTCATTAATGTGATGATATCAAACCTGATGAGCAAATGGTTCGGGGATGCCCAAAAGCTTGGTAAGTGTGTAGCATTCAACTGTAGCATATTTTAA
Protein sequence

>MsG0780036425.01.T01

MGVLSYAAKAALYCALVTGFRYLNRESSEKAKEIAKRLGRPFFETNSYEDVIADDVINPDHIDVEFDSIGGLETIKKTLFELVILPLQRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVMISNLMSKWFGDAQKLGKCVAFNCSIF*