AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011495.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011495.01.T01 MTR_3g005660 98.108 370 6 1 1 369 1 370 0.0 746
MsG0380011495.01.T01 MTR_0565s0010 56.471 340 144 3 32 369 28 365 2.12e-131 380
MsG0380011495.01.T01 MTR_8g087890 56.932 339 141 4 33 369 28 363 1.91e-129 375
MsG0380011495.01.T01 MTR_3g024510 54.867 339 148 4 33 369 35 370 1.49e-126 369
MsG0380011495.01.T01 MTR_3g005650 47.727 352 174 7 20 369 14 357 1.57e-110 327
MsG0380011495.01.T01 MTR_3g098270 42.077 366 202 6 8 367 6 367 6.34e-99 298
MsG0380011495.01.T01 MTR_8g087870 45.428 339 170 8 33 369 26 351 2.91e-95 288
MsG0380011495.01.T01 MTR_2g017925 44.970 338 169 6 33 367 30 353 1.93e-90 276
MsG0380011495.01.T01 MTR_2g017955 43.491 338 179 5 33 367 30 358 4.98e-90 276
MsG0380011495.01.T01 MTR_2g017875 43.188 345 180 8 30 369 28 361 2.54e-88 271
MsG0380011495.01.T01 MTR_4g035353 40.563 355 200 6 19 369 16 363 1.07e-87 269
MsG0380011495.01.T01 MTR_3g023220 44.807 337 169 9 33 367 30 351 1.07e-87 269
MsG0380011495.01.T01 MTR_2g017915 43.195 338 159 6 33 367 30 337 1.77e-85 263
MsG0380011495.01.T01 MTR_2g017965 42.059 340 182 7 33 367 30 359 4.59e-84 260
MsG0380011495.01.T01 MTR_2g033930 42.059 340 185 9 32 366 28 360 1.52e-77 243
MsG0380011495.01.T01 MTR_4g122200 40.469 341 191 9 32 366 31 365 1.08e-73 233
MsG0380011495.01.T01 MTR_2g033920 41.071 336 184 11 38 366 37 365 4.40e-70 224
MsG0380011495.01.T01 MTR_7g116570 34.973 366 230 8 7 369 6 366 7.82e-69 221
MsG0380011495.01.T01 MTR_5g078210 40.683 322 177 10 38 354 27 339 1.86e-68 219
MsG0380011495.01.T01 MTR_1g069175 38.938 339 190 9 37 366 34 364 2.31e-66 214
MsG0380011495.01.T01 MTR_8g079050 39.645 338 192 9 38 366 39 373 5.60e-66 214
MsG0380011495.01.T01 MTR_5g009100 36.283 339 200 9 38 368 48 378 2.89e-65 212
MsG0380011495.01.T01 MTR_7g116520 35.714 364 220 7 9 369 14 366 1.49e-64 210
MsG0380011495.01.T01 MTR_1g079540 37.202 336 203 8 37 368 32 363 7.06e-63 205
MsG0380011495.01.T01 MTR_1g024890 34.146 369 230 9 4 368 5 364 7.49e-63 205
MsG0380011495.01.T01 MTR_3g435540 40.506 316 176 9 38 348 25 333 1.78e-62 204
MsG0380011495.01.T01 MTR_7g116500 35.119 336 211 7 37 369 34 365 5.92e-62 203
MsG0380011495.01.T01 MTR_1g025720 33.243 367 223 9 1 357 1 355 1.66e-61 201
MsG0380011495.01.T01 MTR_1g025780 33.043 345 213 8 4 343 13 344 2.43e-60 199
MsG0380011495.01.T01 MTR_4g108690 38.413 315 184 7 38 348 29 337 2.27e-59 196
MsG0380011495.01.T01 MTR_3g114090 35.542 332 195 10 29 349 29 352 1.06e-58 194
MsG0380011495.01.T01 MTR_7g116510 34.706 340 216 5 33 369 22 358 1.08e-58 194
MsG0380011495.01.T01 MTR_3g052490 34.758 351 208 9 30 369 26 366 1.09e-58 194
MsG0380011495.01.T01 MTR_4g019880 33.424 368 224 10 8 369 14 366 1.25e-58 194
MsG0380011495.01.T01 MTR_3g052480 34.188 351 211 9 30 369 27 368 1.26e-58 194
MsG0380011495.01.T01 MTR_5g093090 35.920 348 202 11 31 367 23 360 2.45e-58 193
MsG0380011495.01.T01 MTR_7g008060 33.973 365 219 8 8 369 7 352 7.77e-58 192
MsG0380011495.01.T01 MTR_4g056280 34.906 318 197 7 34 347 28 339 5.12e-57 190
MsG0380011495.01.T01 MTR_1g025700 33.750 320 199 7 27 341 41 352 8.57e-57 189
MsG0380011495.01.T01 MTR_6g021530 34.203 345 218 8 30 369 22 362 3.07e-56 188
MsG0380011495.01.T01 MTR_1g079530 36.607 336 200 9 37 369 30 355 7.34e-56 187
MsG0380011495.01.T01 MTR_5g084750 37.500 328 179 12 33 348 27 340 8.09e-56 186
MsG0380011495.01.T01 MTR_3g114120 33.538 325 203 8 22 341 33 349 1.39e-55 186
MsG0380011495.01.T01 MTR_2g084585 36.364 319 193 8 34 348 28 340 2.25e-55 185
MsG0380011495.01.T01 MTR_3g021460 34.808 339 197 9 34 367 29 348 4.91e-55 184
MsG0380011495.01.T01 MTR_2g018015 46.569 204 107 2 28 230 28 230 6.84e-55 182
MsG0380011495.01.T01 MTR_3g052580 32.951 349 210 10 30 366 22 358 6.94e-55 185
MsG0380011495.01.T01 MTR_3g052580 32.951 349 210 10 30 366 21 357 1.92e-54 184
MsG0380011495.01.T01 MTR_2g461580 34.218 339 199 9 34 367 29 348 2.11e-54 183
MsG0380011495.01.T01 MTR_0009s0250 33.528 343 203 10 30 366 27 350 4.81e-54 182
MsG0380011495.01.T01 MTR_5g022630 36.070 341 190 13 29 355 36 362 3.55e-53 180
MsG0380011495.01.T01 MTR_1g025760 32.615 325 202 10 24 341 69 383 8.95e-53 180
MsG0380011495.01.T01 MTR_5g022640 34.278 353 206 11 5 347 17 353 1.16e-52 179
MsG0380011495.01.T01 MTR_2g100620 34.259 324 198 8 34 350 29 344 1.34e-52 178
MsG0380011495.01.T01 MTR_8g075230 35.077 325 196 9 29 346 29 345 2.06e-52 178
MsG0380011495.01.T01 MTR_8g014910 34.688 320 198 8 34 348 30 343 4.46e-52 177
MsG0380011495.01.T01 MTR_1g025680 33.537 328 204 8 20 341 18 337 1.82e-51 178
MsG0380011495.01.T01 MTR_4g056160 34.154 325 195 10 34 348 25 340 1.07e-50 173
MsG0380011495.01.T01 MTR_2g015080 31.928 332 203 8 33 348 35 359 2.25e-49 170
MsG0380011495.01.T01 MTR_8g074570 33.146 356 203 11 30 367 32 370 2.30e-49 170
MsG0380011495.01.T01 MTR_5g084770 33.750 320 201 8 34 348 26 339 2.27e-48 167
MsG0380011495.01.T01 MTR_5g078210 39.850 266 147 9 38 298 27 284 4.93e-48 166
MsG0380011495.01.T01 MTR_2g033920 40.226 266 147 9 38 298 37 295 2.52e-47 163
MsG0380011495.01.T01 MTR_5g074270 33.746 323 192 11 38 349 35 346 6.79e-47 164
MsG0380011495.01.T01 MTR_3g464730 33.433 335 200 12 33 357 25 346 4.45e-46 161
MsG0380011495.01.T01 MTR_5g084790 32.087 321 208 8 33 349 29 343 6.99e-46 160
MsG0380011495.01.T01 MTR_3g082830 31.889 323 210 8 30 348 32 348 3.05e-45 159
MsG0380011495.01.T01 MTR_8g031390 31.496 381 222 14 1 365 3 360 5.56e-45 159
MsG0380011495.01.T01 MTR_5g083040 33.540 322 191 7 33 341 29 340 2.10e-44 157
MsG0380011495.01.T01 MTR_0127s0040 34.025 241 156 3 129 369 1 238 2.16e-44 153
MsG0380011495.01.T01 MTR_8g075200 28.242 347 238 8 8 349 12 352 4.71e-44 157
MsG0380011495.01.T01 MTR_8g031400 31.135 379 223 14 4 366 6 362 8.78e-44 155
MsG0380011495.01.T01 MTR_8g074560 31.549 355 211 12 30 366 25 365 9.39e-44 155
MsG0380011495.01.T01 MTR_8g031420 31.117 376 221 14 4 366 10 360 1.92e-43 154
MsG0380011495.01.T01 MTR_8g031430 30.053 376 227 13 4 366 10 362 4.63e-43 153
MsG0380011495.01.T01 MTR_8g075220 27.171 357 245 9 1 349 7 356 1.42e-42 152
MsG0380011495.01.T01 MTR_4g087985 28.775 351 231 9 3 343 7 348 4.20e-42 151
MsG0380011495.01.T01 MTR_2g017925 36.555 238 134 6 133 367 27 250 3.63e-39 140
MsG0380011495.01.T01 MTR_2g044100 30.294 340 218 11 37 366 44 374 2.40e-38 142
MsG0380011495.01.T01 MTR_1g025910 30.058 346 210 8 41 367 41 373 4.65e-38 140
MsG0380011495.01.T01 MTR_8g031390 31.402 328 192 12 1 318 3 307 1.01e-36 135
MsG0380011495.01.T01 MTR_8g022790 28.846 364 236 11 10 366 11 358 4.82e-36 134
MsG0380011495.01.T01 MTR_8g022810 28.615 325 217 8 36 353 41 357 9.16e-36 134
MsG0380011495.01.T01 MTR_2g017895 31.507 292 168 9 82 369 4 267 1.25e-33 126
MsG0380011495.01.T01 MTR_5g093090 33.453 278 165 10 31 298 23 290 5.90e-33 125
MsG0380011495.01.T01 MTR_1g060490 30.794 315 184 11 37 341 38 328 1.88e-31 122
MsG0380011495.01.T01 MTR_1g060500 29.781 319 190 10 37 341 41 339 3.53e-30 119
MsG0380011495.01.T01 MTR_8g074580 26.478 389 226 11 30 367 38 417 6.30e-30 119
MsG0380011495.01.T01 MTR_5g087690 24.928 349 233 10 31 367 45 376 2.22e-29 117
MsG0380011495.01.T01 MTR_7g087190 27.941 340 206 13 33 344 40 368 1.19e-27 112
MsG0380011495.01.T01 MTR_7g033150 26.263 396 242 10 4 365 3 382 2.67e-27 111
MsG0380011495.01.T01 MTR_1108s0010 32.075 212 127 5 137 347 3 198 1.78e-26 105
MsG0380011495.01.T01 MTR_8g022810 26.935 323 168 10 38 353 43 304 2.13e-26 107
MsG0380011495.01.T01 MTR_2g079090 27.056 377 228 14 4 361 7 355 4.67e-26 107
MsG0380011495.01.T01 MTR_2g087292 27.729 339 155 11 32 366 29 281 7.99e-26 105
MsG0380011495.01.T01 MTR_8g089805 27.596 337 206 12 35 344 39 364 8.84e-26 107
MsG0380011495.01.T01 MTR_1g079590 33.152 184 119 4 30 211 25 206 1.02e-25 103
MsG0380011495.01.T01 MTR_2g079080 26.790 377 229 14 4 361 7 355 1.47e-25 106
MsG0380011495.01.T01 MTR_0029s0050 27.056 377 228 14 4 361 7 355 1.48e-25 106
MsG0380011495.01.T01 MTR_0029s0100 27.056 377 228 14 4 361 7 355 3.95e-25 105
MsG0380011495.01.T01 MTR_1g030268 26.567 335 213 10 35 347 39 362 3.98e-25 105
MsG0380011495.01.T01 MTR_1g030230 26.571 350 221 11 35 360 31 368 9.69e-25 104
MsG0380011495.01.T01 MTR_1g092740 28.165 316 191 12 37 341 39 329 1.21e-24 103
MsG0380011495.01.T01 MTR_1g030275 26.786 336 211 11 35 347 38 361 2.93e-24 102
MsG0380011495.01.T01 MTR_7g033155 25.323 387 232 10 5 348 7 379 5.23e-24 102
MsG0380011495.01.T01 MTR_6g007100 24.868 378 243 11 1 363 6 357 8.95e-24 101
MsG0380011495.01.T01 MTR_5g093090 35.789 190 106 7 31 210 23 206 1.04e-23 98.2
MsG0380011495.01.T01 MTR_1g092690 28.834 326 175 14 37 341 52 341 1.97e-23 100
MsG0380011495.01.T01 MTR_7g104220 28.302 318 189 12 37 341 43 334 2.06e-23 100
MsG0380011495.01.T01 MTR_1g030220 26.857 350 221 10 38 363 42 380 3.30e-23 100
MsG0380011495.01.T01 MTR_6g007090 27.616 344 203 11 33 349 36 360 2.82e-22 97.4
MsG0380011495.01.T01 MTR_3g463960 27.003 337 207 13 38 349 46 368 2.98e-22 97.4
MsG0380011495.01.T01 MTR_3g463950 27.003 337 207 13 38 349 46 368 2.98e-22 97.4
MsG0380011495.01.T01 MTR_3g463970 27.003 337 207 13 38 349 46 368 2.98e-22 97.4
MsG0380011495.01.T01 MTR_3g463940 27.003 337 207 13 38 349 46 368 2.98e-22 97.4
MsG0380011495.01.T01 MTR_8g028160 26.870 361 221 11 38 369 38 384 1.36e-21 95.5
MsG0380011495.01.T01 MTR_7g111780 27.083 336 215 12 38 360 38 356 1.53e-21 95.1
MsG0380011495.01.T01 MTR_6g007095 27.059 340 206 11 35 349 40 362 2.89e-21 95.9
MsG0380011495.01.T01 MTR_6g007095 25.987 304 189 10 63 349 394 678 1.44e-18 87.8
MsG0380011495.01.T01 MTR_1g030340 26.254 339 206 10 35 344 41 364 3.51e-21 94.4
MsG0380011495.01.T01 MTR_7g116870 25.210 357 220 11 38 365 35 373 3.63e-21 94.0
MsG0380011495.01.T01 MTR_1g092760 27.019 322 187 14 37 341 40 330 4.75e-21 93.2
MsG0380011495.01.T01 MTR_7g113860 26.453 344 207 12 35 348 28 355 6.16e-21 93.6
MsG0380011495.01.T01 MTR_7g033165 25.905 359 228 10 15 348 14 359 1.18e-20 92.8
MsG0380011495.01.T01 MTR_6g049220 47.917 96 47 2 34 126 28 123 3.04e-20 87.4
MsG0380011495.01.T01 MTR_7g113860 25.852 352 222 12 35 360 34 372 4.64e-20 90.9
MsG0380011495.01.T01 MTR_2g043980 28.485 330 194 14 38 349 36 341 5.29e-20 90.5
MsG0380011495.01.T01 MTR_5g074210 32.143 140 93 2 211 349 64 202 1.51e-19 86.7
MsG0380011495.01.T01 MTR_2g015630 25.672 335 207 13 41 348 36 355 2.53e-19 89.0
MsG0380011495.01.T01 MTR_3g463930 25.731 342 212 13 38 349 46 375 2.72e-19 89.0
MsG0380011495.01.T01 MTR_8g038680 26.685 356 220 11 35 363 27 368 2.83e-19 88.6
MsG0380011495.01.T01 MTR_1g092750 27.103 321 189 14 37 341 41 332 2.94e-19 88.2
MsG0380011495.01.T01 MTR_4g036375 32.240 183 106 6 4 183 10 177 7.67e-19 84.0
MsG0380011495.01.T01 MTR_3g069780 25.455 330 218 12 38 349 32 351 8.88e-18 84.3
MsG0380011495.01.T01 MTR_1g030268 26.812 276 179 8 35 298 39 303 1.22e-17 83.2
MsG0380011495.01.T01 MTR_3g438030 24.620 329 222 11 38 349 32 351 3.00e-17 82.8
MsG0380011495.01.T01 MTR_2g015590 25.344 363 234 12 16 350 3 356 3.15e-17 82.4
MsG0380011495.01.T01 MTR_2g015580 25.373 335 212 13 38 348 49 369 1.13e-16 81.3
MsG0380011495.01.T01 MTR_2g015650 26.087 368 232 15 6 349 3 354 2.10e-16 80.1
MsG0380011495.01.T01 MTR_3g011860 46.988 83 43 1 246 328 241 322 2.22e-16 79.7
MsG0380011495.01.T01 MTR_3g069520 26.807 332 209 16 38 349 32 349 4.97e-16 79.0
MsG0380011495.01.T01 MTR_3g448360 25.131 382 222 20 1 349 1 351 6.24e-16 78.6
MsG0380011495.01.T01 MTR_4g104240 22.881 354 239 12 5 341 13 349 6.99e-16 78.6
MsG0380011495.01.T01 MTR_8g089805 27.094 203 124 6 160 344 100 296 7.31e-16 78.2
MsG0380011495.01.T01 MTR_7g111780 27.723 202 131 6 167 360 63 257 1.23e-15 76.6
MsG0380011495.01.T01 MTR_1g030265 24.735 283 185 8 87 347 53 329 1.44e-15 77.4
MsG0380011495.01.T01 MTR_7g113860 24.354 271 182 8 109 360 32 298 8.41e-15 74.7
MsG0380011495.01.T01 MTR_1g079570 29.286 140 95 4 231 368 4 141 3.95e-14 69.3
MsG0380011495.01.T01 MTR_1g082390 24.207 347 210 11 35 348 30 356 9.49e-14 72.0
MsG0380011495.01.T01 MTR_6g049230 34.400 125 80 2 210 333 71 194 4.15e-13 67.8
MsG0380011495.01.T01 MTR_2g015670 24.566 346 225 13 20 349 15 340 1.49e-12 68.6
MsG0380011495.01.T01 MTR_8g012540 25.497 302 194 9 35 318 27 315 2.03e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011495.01.T01 AT1G33811 71.676 346 94 3 28 369 25 370 0.0 508
MsG0380011495.01.T01 AT4G18970 55.030 338 148 3 34 369 26 361 2.02e-124 363
MsG0380011495.01.T01 AT4G18970 55.193 337 147 3 35 369 27 361 4.54e-123 361
MsG0380011495.01.T01 AT5G45670 54.599 337 149 3 35 369 28 362 6.79e-122 356
MsG0380011495.01.T01 AT1G29670 50.276 362 170 6 12 369 8 363 3.30e-121 355
MsG0380011495.01.T01 AT1G29670 50.276 362 170 6 12 369 76 431 1.69e-120 355
MsG0380011495.01.T01 AT1G29660 51.917 339 158 4 33 369 29 364 5.82e-115 339
MsG0380011495.01.T01 AT1G71691 47.774 337 169 6 34 369 53 383 2.65e-105 315
MsG0380011495.01.T01 AT5G15720 49.412 340 163 8 35 369 29 364 9.06e-102 305
MsG0380011495.01.T01 AT1G71250 46.023 352 181 6 24 369 25 373 3.52e-100 301
MsG0380011495.01.T01 AT5G08460 44.282 341 181 6 35 369 48 385 3.70e-93 284
MsG0380011495.01.T01 AT2G19010 42.136 337 180 6 31 367 25 346 1.51e-90 276
MsG0380011495.01.T01 AT2G19010 42.136 337 180 6 31 367 55 376 8.89e-90 275
MsG0380011495.01.T01 AT2G19050 42.183 339 181 6 31 369 26 349 3.50e-85 262
MsG0380011495.01.T01 AT4G30140 42.899 338 174 7 30 366 27 346 3.63e-85 262
MsG0380011495.01.T01 AT2G19060 41.618 346 187 6 24 368 18 349 3.74e-84 259
MsG0380011495.01.T01 AT1G71691 43.509 285 154 6 86 369 4 282 8.57e-77 238
MsG0380011495.01.T01 AT5G15720 44.369 293 155 7 82 369 44 333 1.47e-75 237
MsG0380011495.01.T01 AT5G15720 48.507 268 130 7 35 298 29 292 3.81e-71 225
MsG0380011495.01.T01 AT2G23540 39.142 373 212 9 6 366 15 384 3.83e-71 227
MsG0380011495.01.T01 AT1G71691 46.038 265 137 5 34 298 53 311 6.08e-71 224
MsG0380011495.01.T01 AT3G50400 40.643 342 190 9 38 369 36 374 3.57e-68 219
MsG0380011495.01.T01 AT5G37690 38.938 339 197 8 13 348 4 335 1.89e-67 217
MsG0380011495.01.T01 AT2G19050 43.130 262 139 3 31 292 26 277 3.34e-67 214
MsG0380011495.01.T01 AT4G10950 36.728 324 197 6 28 348 63 381 3.24e-65 213
MsG0380011495.01.T01 AT4G28780 35.121 373 228 10 1 369 1 363 1.61e-64 209
MsG0380011495.01.T01 AT3G04290 36.499 337 207 6 36 369 29 361 4.59e-63 206
MsG0380011495.01.T01 AT4G10950 35.802 324 196 6 28 348 63 377 1.90e-62 205
MsG0380011495.01.T01 AT5G37690 38.053 339 192 9 13 348 4 327 3.23e-62 203
MsG0380011495.01.T01 AT5G22810 35.244 349 214 8 8 348 3 347 1.73e-61 201
MsG0380011495.01.T01 AT1G74460 40.379 317 175 10 38 348 25 333 3.83e-61 201
MsG0380011495.01.T01 AT5G41890 34.974 386 209 10 1 366 9 372 6.28e-61 201
MsG0380011495.01.T01 AT5G33370 33.807 352 222 7 20 366 14 359 1.73e-60 199
MsG0380011495.01.T01 AT5G18430 34.731 334 207 6 36 363 28 356 8.93e-60 197
MsG0380011495.01.T01 AT1G75890 35.159 347 212 10 8 348 19 358 1.12e-59 197
MsG0380011495.01.T01 AT1G75890 35.159 347 212 10 8 348 48 387 1.90e-59 197
MsG0380011495.01.T01 AT5G55050 33.237 346 209 10 34 366 37 373 4.17e-57 191
MsG0380011495.01.T01 AT1G75890 33.983 359 213 10 8 348 19 371 9.68e-57 190
MsG0380011495.01.T01 AT1G75880 33.807 352 219 11 5 349 20 364 1.94e-54 184
MsG0380011495.01.T01 AT1G75880 33.807 352 220 10 5 349 20 365 2.19e-54 183
MsG0380011495.01.T01 AT3G53100 33.742 326 204 8 28 348 21 339 8.88e-52 176
MsG0380011495.01.T01 AT3G14820 32.615 325 200 9 34 349 30 344 1.33e-51 176
MsG0380011495.01.T01 AT5G03820 34.268 321 199 8 34 348 31 345 6.44e-51 174
MsG0380011495.01.T01 AT5G03820 34.268 321 199 8 34 348 59 373 1.71e-50 174
MsG0380011495.01.T01 AT5G42170 32.399 321 204 8 27 343 41 352 2.82e-50 172
MsG0380011495.01.T01 AT1G59406 32.399 321 202 10 28 343 22 332 4.83e-50 171
MsG0380011495.01.T01 AT1G59030 32.399 321 202 10 28 343 22 332 4.83e-50 171
MsG0380011495.01.T01 AT1G58725 32.399 321 202 10 28 343 22 332 4.83e-50 171
MsG0380011495.01.T01 AT2G04570 33.642 324 201 9 33 350 25 340 8.57e-50 171
MsG0380011495.01.T01 AT1G20120 34.056 323 195 10 35 349 77 389 2.96e-49 171
MsG0380011495.01.T01 AT3G16370 34.462 325 202 9 31 350 25 343 3.35e-49 169
MsG0380011495.01.T01 AT5G03810 33.438 320 202 8 34 348 28 341 1.27e-48 168
MsG0380011495.01.T01 AT1G75900 30.792 341 213 10 10 341 19 345 1.45e-48 168
MsG0380011495.01.T01 AT2G03980 32.938 337 200 13 31 356 38 359 8.33e-48 166
MsG0380011495.01.T01 AT2G03980 32.938 337 200 13 31 356 38 359 8.33e-48 166
MsG0380011495.01.T01 AT2G03980 32.938 337 200 13 31 356 38 359 8.33e-48 166
MsG0380011495.01.T01 AT2G03980 32.938 337 200 13 31 356 38 359 8.33e-48 166
MsG0380011495.01.T01 AT4G16230 44.498 209 108 6 31 235 25 229 3.09e-47 161
MsG0380011495.01.T01 AT1G73610 33.654 312 184 9 34 341 33 325 4.53e-46 161
MsG0380011495.01.T01 AT1G20132 31.532 333 205 10 30 349 55 377 6.55e-46 161
MsG0380011495.01.T01 AT1G20130 31.595 326 204 9 30 343 178 496 1.60e-45 163
MsG0380011495.01.T01 AT1G20130 31.595 326 204 9 30 343 198 516 2.23e-45 163
MsG0380011495.01.T01 AT2G42990 31.902 326 204 9 31 348 23 338 1.68e-44 157
MsG0380011495.01.T01 AT1G06990 30.721 319 210 8 35 348 36 348 4.57e-44 156
MsG0380011495.01.T01 AT2G31540 32.268 313 200 10 35 341 34 340 8.49e-44 155
MsG0380011495.01.T01 AT4G26790 30.625 320 212 7 33 348 26 339 1.43e-43 154
MsG0380011495.01.T01 AT4G26790 30.625 320 212 7 33 348 26 339 1.43e-43 154
MsG0380011495.01.T01 AT2G40250 28.395 324 216 8 34 348 34 350 2.63e-43 154
MsG0380011495.01.T01 AT2G30310 29.841 315 209 10 35 343 33 341 2.77e-43 154
MsG0380011495.01.T01 AT1G58430 30.380 316 202 11 35 341 34 340 6.47e-43 153
MsG0380011495.01.T01 AT2G30220 30.696 316 205 10 35 343 32 340 6.80e-43 153
MsG0380011495.01.T01 AT1G58520 31.056 322 200 11 27 343 21 325 9.86e-43 152
MsG0380011495.01.T01 AT1G58525 31.056 322 200 11 27 343 21 325 9.86e-43 152
MsG0380011495.01.T01 AT2G24560 30.351 313 206 10 35 341 33 339 4.53e-42 150
MsG0380011495.01.T01 AT1G75920 33.746 323 194 9 32 349 25 332 4.90e-42 150
MsG0380011495.01.T01 AT5G33370 33.798 287 169 6 20 302 14 283 5.25e-42 150
MsG0380011495.01.T01 AT1G20135 32.573 307 187 10 40 343 33 322 9.70e-42 149
MsG0380011495.01.T01 AT1G23500 34.365 323 182 11 34 348 33 333 1.65e-41 149
MsG0380011495.01.T01 AT5G63170 30.530 321 189 10 33 343 25 321 7.85e-41 147
MsG0380011495.01.T01 AT3G43570 28.190 337 199 9 11 343 6 303 8.96e-41 146
MsG0380011495.01.T01 AT5G45950 31.212 330 209 12 32 356 36 352 1.48e-39 144
MsG0380011495.01.T01 AT1G71120 30.409 342 216 9 34 367 29 356 1.59e-39 144
MsG0380011495.01.T01 AT5G45960 28.698 338 210 10 22 341 30 354 7.58e-39 142
MsG0380011495.01.T01 AT1G75930 33.851 322 183 11 38 349 31 332 1.03e-38 141
MsG0380011495.01.T01 AT1G75920 32.249 338 194 10 32 349 20 342 3.81e-38 140
MsG0380011495.01.T01 AT3G14225 31.195 343 217 11 38 369 39 373 5.36e-37 137
MsG0380011495.01.T01 AT3G14225 31.304 345 218 11 38 369 39 377 1.83e-36 136
MsG0380011495.01.T01 AT3G43550 30.034 293 190 10 10 298 5 286 6.57e-36 132
MsG0380011495.01.T01 AT5G40990 31.304 345 218 11 36 369 37 373 3.14e-35 133
MsG0380011495.01.T01 AT1G75910 30.312 320 204 8 35 349 27 332 6.02e-35 131
MsG0380011495.01.T01 AT1G75920 30.841 321 175 9 32 349 25 301 2.90e-32 123
MsG0380011495.01.T01 AT2G04020 36.792 212 121 5 31 238 38 240 7.11e-32 121
MsG0380011495.01.T01 AT2G04020 30.330 333 172 11 31 356 38 317 1.80e-31 121
MsG0380011495.01.T01 AT1G53920 28.857 350 218 12 34 366 46 381 3.46e-31 122
MsG0380011495.01.T01 AT1G75920 32.203 295 180 9 60 349 25 304 5.19e-31 120
MsG0380011495.01.T01 AT2G24560 30.147 272 178 10 35 300 33 298 1.42e-29 116
MsG0380011495.01.T01 AT1G53940 30.484 351 213 14 36 369 39 375 6.21e-29 115
MsG0380011495.01.T01 AT1G54020 26.087 345 226 11 31 368 26 348 9.78e-28 112
MsG0380011495.01.T01 AT1G54010 26.211 351 233 11 26 368 24 356 1.07e-27 112
MsG0380011495.01.T01 AT1G53990 28.042 378 238 13 5 369 8 364 2.81e-27 111
MsG0380011495.01.T01 AT3G09930 28.750 320 189 11 37 341 40 335 1.01e-26 109
MsG0380011495.01.T01 AT3G09930 28.750 320 189 11 37 341 40 335 1.01e-26 109
MsG0380011495.01.T01 AT1G54000 26.836 354 227 13 26 368 24 356 1.26e-26 109
MsG0380011495.01.T01 AT1G54030 27.976 336 214 14 37 369 53 363 3.30e-26 108
MsG0380011495.01.T01 AT5G03610 28.481 316 192 14 38 341 45 338 4.66e-25 104
MsG0380011495.01.T01 AT1G28570 26.862 376 230 17 1 349 1 358 1.79e-24 103
MsG0380011495.01.T01 AT3G14220 29.240 342 216 14 33 367 29 351 4.72e-24 102
MsG0380011495.01.T01 AT3G05180 29.619 341 200 15 35 348 35 362 3.06e-23 100
MsG0380011495.01.T01 AT4G16233 42.063 126 70 3 246 369 6 130 3.24e-23 94.4
MsG0380011495.01.T01 AT1G56670 25.263 380 232 14 7 360 10 363 1.08e-22 98.6
MsG0380011495.01.T01 AT3G14210 27.019 359 212 16 31 368 29 358 1.37e-22 98.6
MsG0380011495.01.T01 AT3G27950 25.915 355 230 10 35 369 31 372 1.56e-22 98.2
MsG0380011495.01.T01 AT5G03600 28.261 322 189 12 32 341 10 301 2.72e-22 96.7
MsG0380011495.01.T01 AT5G03600 28.261 322 189 12 32 341 45 336 3.79e-22 96.7
MsG0380011495.01.T01 AT1G31550 25.826 333 209 12 40 348 40 358 4.17e-22 97.1
MsG0380011495.01.T01 AT2G31550 28.947 190 129 5 154 341 14 199 5.23e-22 93.6
MsG0380011495.01.T01 AT1G09390 25.731 342 228 9 32 360 33 361 5.40e-22 96.3
MsG0380011495.01.T01 AT3G62280 28.367 349 215 14 30 362 30 359 9.60e-22 95.5
MsG0380011495.01.T01 AT1G31550 25.301 332 209 12 40 348 40 355 1.72e-21 95.1
MsG0380011495.01.T01 AT1G28580 25.532 376 231 15 1 350 10 362 2.51e-21 94.7
MsG0380011495.01.T01 AT1G54790 25.212 353 236 11 33 364 29 374 3.29e-21 94.4
MsG0380011495.01.T01 AT3G26430 27.083 336 209 12 35 344 30 355 3.87e-21 94.0
MsG0380011495.01.T01 AT1G28590 26.254 339 203 13 40 349 40 360 6.99e-21 93.6
MsG0380011495.01.T01 AT2G27360 25.434 346 224 14 40 362 37 371 7.13e-21 93.6
MsG0380011495.01.T01 AT4G16220 47.826 115 56 3 31 142 25 138 8.28e-21 90.9
MsG0380011495.01.T01 AT4G01130 25.513 341 213 11 38 350 36 363 9.85e-21 92.8
MsG0380011495.01.T01 AT1G67830 25.072 347 212 11 33 347 27 357 9.94e-21 92.8
MsG0380011495.01.T01 AT5G14450 25.843 356 228 10 35 365 40 384 4.05e-20 91.3
MsG0380011495.01.T01 AT1G28600 25.225 333 211 12 40 348 35 353 1.86e-18 86.3
MsG0380011495.01.T01 AT2G36325 26.331 357 216 16 6 341 10 340 3.69e-18 85.1
MsG0380011495.01.T01 AT1G54020 24.382 283 189 8 90 368 1 262 5.77e-18 83.6
MsG0380011495.01.T01 AT1G54020 24.382 283 189 8 90 368 1 262 5.77e-18 83.6
MsG0380011495.01.T01 AT1G54020 24.382 283 189 8 90 368 1 262 5.77e-18 83.6
MsG0380011495.01.T01 AT1G54790 24.438 356 231 12 35 364 30 373 9.47e-18 84.3
MsG0380011495.01.T01 AT5G45910 29.240 342 211 16 25 343 20 353 1.27e-17 84.0
MsG0380011495.01.T01 AT1G28610 23.416 363 234 13 24 357 19 366 2.24e-17 83.2
MsG0380011495.01.T01 AT1G53940 29.520 271 166 12 36 296 39 294 2.52e-17 82.0
MsG0380011495.01.T01 AT3G48460 23.565 331 220 13 38 348 40 357 5.30e-17 82.0
MsG0380011495.01.T01 AT1G28650 24.058 345 224 14 40 360 41 371 7.76e-17 81.6
MsG0380011495.01.T01 AT1G28640 24.650 357 207 14 40 360 39 369 2.08e-16 80.5
MsG0380011495.01.T01 AT1G28670 23.867 331 210 12 40 343 39 354 4.02e-15 76.6
MsG0380011495.01.T01 AT1G28660 25.000 352 191 15 40 349 39 359 7.36e-15 75.9
MsG0380011495.01.T01 AT1G28660 25.356 351 190 16 40 349 39 358 2.54e-14 73.9
MsG0380011495.01.T01 AT1G54020 25.822 213 144 7 162 368 9 213 3.40e-14 72.0
MsG0380011495.01.T01 AT1G54790 23.560 382 228 14 35 364 30 399 1.08e-13 72.4
MsG0380011495.01.T01 AT3G14210 25.106 235 155 8 146 368 5 230 1.71e-13 70.5
MsG0380011495.01.T01 AT4G01130 24.638 276 180 9 38 298 36 298 1.82e-13 71.2
MsG0380011495.01.T01 AT3G62280 27.143 280 171 11 30 294 30 291 1.12e-12 68.6
MsG0380011495.01.T01 AT4G01130 23.239 284 181 9 95 350 3 277 4.05e-12 66.6
MsG0380011495.01.T01 AT1G56670 23.323 313 194 11 7 298 10 297 1.03e-11 65.5

Find 100 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGCCATGTTTCTTCATATT+TGG 0.151987 3:+396297 MsG0380011495.01.T01:CDS
AAACCCCTTGCTCTTGAATT+TGG 0.162052 3:-396742 None:intergenic
TGCCAATTGTTGGATATTAA+TGG 0.219897 3:-400446 None:intergenic
GTTACAGCAGTTGGTCAAAT+TGG 0.223495 3:+397740 MsG0380011495.01.T01:CDS
AGCAAATGCATATATTATTC+AGG 0.228493 3:+397058 MsG0380011495.01.T01:CDS
TATAATTGCAGCTCAACTTT+TGG 0.269085 3:+396699 MsG0380011495.01.T01:intron
TATGAATTAGCACGTATTAA+TGG 0.270158 3:+397773 MsG0380011495.01.T01:CDS
GGCGACTCATTGGTTGATAA+TGG 0.292013 3:+396318 MsG0380011495.01.T01:CDS
TCCAGCAATTACATTCATTA+GGG 0.299031 3:+397702 MsG0380011495.01.T01:intron
ATCGTGGGAAATATTTGTTT+TGG 0.314915 3:+400347 MsG0380011495.01.T01:CDS
GCCAATTGTTGGATATTAAT+GGG 0.327993 3:-400445 None:intergenic
AGTGCAGATCTAGCATTAAA+TGG 0.346283 3:+397932 MsG0380011495.01.T01:CDS
CTGACACAAATGACCGTATA+CGG 0.349081 3:-396155 None:intergenic
GTCCAGCAATTACATTCATT+AGG 0.349350 3:+397701 MsG0380011495.01.T01:intron
TATCAATGGAGGGCAGCTTC+CGG 0.349478 3:+397874 MsG0380011495.01.T01:CDS
ATCAATGGAGGGCAGCTTCC+GGG 0.356171 3:+397875 MsG0380011495.01.T01:CDS
CGAACCTTCGTCGATGCATT+AGG 0.365692 3:+396435 MsG0380011495.01.T01:CDS
AGGGCTAATTATCGACCTTA+TGG 0.366890 3:+396369 MsG0380011495.01.T01:CDS
TCCCATTAATATCCAACAAT+TGG 0.374975 3:+400444 MsG0380011495.01.T01:CDS
TCTAAAGCATTGCCAATTGT+TGG 0.375039 3:-400456 None:intergenic
CAGTCATGAAATAGTTGTTC+AGG 0.377347 3:-397099 None:intergenic
CCCCTTGCTCTTGAATTTGG+AGG 0.378814 3:-396739 None:intergenic
CTTCATATTTGGCGACTCAT+TGG 0.380484 3:+396308 MsG0380011495.01.T01:CDS
AGGGCAGATGCAAAAGCTTT+AGG 0.387451 3:-397151 None:intergenic
AAATTCAAGAGCAAGGGGTT+TGG 0.392526 3:+396744 MsG0380011495.01.T01:CDS
TGCATATATTATTCAGGGTT+GGG 0.404381 3:+397064 MsG0380011495.01.T01:CDS
AAATTTCCTTTGTACACGTA+TGG 0.408909 3:+400592 MsG0380011495.01.T01:three_prime_UTR
TCCTACAAAATGTTTGTCTC+AGG 0.412148 3:+396245 MsG0380011495.01.T01:CDS
AGCATTAAATGGAAAATCAA+TGG 0.419825 3:+397943 MsG0380011495.01.T01:CDS
CATGGCACTTGTTGTCCCTC+TGG 0.421677 3:-396282 None:intergenic
AGAGGAGTCAATTATGCATC+TGG 0.423551 3:+396775 MsG0380011495.01.T01:CDS
TTAATTTACTCACAGATAGT+TGG 0.426379 3:-397192 None:intergenic
CAAATGAGAAGGTTCTTTAG+AGG 0.429552 3:+397007 MsG0380011495.01.T01:CDS
AATTAGCCCTAGCAAGTGTT+AGG 0.433591 3:-396356 None:intergenic
TAAGACCTGAGTTAAAATAC+TGG 0.436936 3:-397835 None:intergenic
TCTTCACATACTTGTTGTAA+TGG 0.441043 3:-400325 None:intergenic
GCAGGCATCAGAGAGGAAAC+AGG 0.442089 3:+396802 MsG0380011495.01.T01:CDS
AGGGGTTTGGACCTTCTTAG+AGG 0.442660 3:+396757 MsG0380011495.01.T01:CDS
ACTGAGCAAGTGACAAACTT+TGG 0.446748 3:+396971 MsG0380011495.01.T01:CDS
TTACAGCAGTTGGTCAAATT+GGG 0.452443 3:+397741 MsG0380011495.01.T01:CDS
ATGCATATATTATTCAGGGT+TGG 0.453650 3:+397063 MsG0380011495.01.T01:CDS
GTTAATCTTCTCATTGCATC+CGG 0.456244 3:-397804 None:intergenic
TTAATACGTGCTAATTCATA+TGG 0.463074 3:-397770 None:intergenic
AATAATATATGCATTTGCTT+AGG 0.472093 3:-397054 None:intergenic
GCAAATGCATATATTATTCA+GGG 0.476578 3:+397059 MsG0380011495.01.T01:CDS
ATCGACGAAGGTTCGACCAT+TGG 0.483856 3:-396427 None:intergenic
CACATACTTGTTGTAATGGA+AGG 0.499795 3:-400321 None:intergenic
TCCTCCAAATTCAAGAGCAA+GGG 0.502054 3:+396738 MsG0380011495.01.T01:CDS
GCATTAAATGGAAAATCAAT+GGG 0.502185 3:+397944 MsG0380011495.01.T01:CDS
AATTTCCTTTGTACACGTAT+GGG 0.507719 3:+400593 MsG0380011495.01.T01:three_prime_UTR
AATTATGCATCTGGAGCAGC+AGG 0.508819 3:+396784 MsG0380011495.01.T01:CDS
CAATTAGTTCAGAATATCAA+TGG 0.510533 3:+397860 MsG0380011495.01.T01:CDS
ATGGGATCCTAACACTTGCT+AGG 0.512016 3:+396349 MsG0380011495.01.T01:CDS
AAAATGTTGGCCAACTCAGT+TGG 0.512592 3:-400382 None:intergenic
TGTGGGAAGTCGATGCCATA+AGG 0.521963 3:-396384 None:intergenic
TGCTTTCCACCCAACTGAGT+TGG 0.522513 3:+400372 MsG0380011495.01.T01:CDS
AAATGTTGGCCAACTCAGTT+GGG 0.523121 3:-400381 None:intergenic
TTCCTCCAAATTCAAGAGCA+AGG 0.526404 3:+396737 MsG0380011495.01.T01:CDS
CATAATTGACTCCTCTAAGA+AGG 0.526704 3:-396768 None:intergenic
AAGCGACCGGTGGGACCTTG+TGG 0.527657 3:-396402 None:intergenic
TTGATAATGGAAACAACAAT+GGG 0.532524 3:+396331 MsG0380011495.01.T01:CDS
GACAAGGGATGCTGTGGTGT+TGG 0.534229 3:+400274 MsG0380011495.01.T01:CDS
GGCGAGCGTAGTCTTGAAGA+AGG 0.538225 3:-397171 None:intergenic
GTTGATAATGGAAACAACAA+TGG 0.544775 3:+396330 MsG0380011495.01.T01:CDS
AGCGACCGGTGGGACCTTGT+GGG 0.545059 3:-396401 None:intergenic
AAAGTGATCGTTACAGCAGT+TGG 0.549990 3:+397731 MsG0380011495.01.T01:CDS
TTGTGAACTGTATGATGCCT+TGG 0.550217 3:-400410 None:intergenic
TCGACCATTGGTGAAGCGAC+CGG 0.554522 3:-396415 None:intergenic
AACAAGTATGTGAAGATCGT+GGG 0.555057 3:+400332 MsG0380011495.01.T01:CDS
GACTTCCCACAAGGTCCCAC+CGG 0.565595 3:+396396 MsG0380011495.01.T01:CDS
CGTATTAATGGTAACATCAC+CGG 0.574338 3:+397785 MsG0380011495.01.T01:CDS
CCCACCGGTCGCTTCACCAA+TGG 0.577167 3:+396411 MsG0380011495.01.T01:CDS
TCATATTGTTCATTTGTGTG+TGG 0.579622 3:+400494 MsG0380011495.01.T01:three_prime_UTR
AGAGGAAACAGGCAGTAACC+TGG 0.589288 3:+396813 MsG0380011495.01.T01:CDS
CCTCCAAATTCAAGAGCAAG+GGG 0.596481 3:+396739 MsG0380011495.01.T01:CDS
CAACAAGTATGTGAAGATCG+TGG 0.597220 3:+400331 MsG0380011495.01.T01:CDS
ACCATTGGTGAAGCGACCGG+TGG 0.597222 3:-396412 None:intergenic
ACCTGAGTTAAAATACTGGA+TGG 0.601483 3:-397831 None:intergenic
TGGGATCCTAACACTTGCTA+GGG 0.606593 3:+396350 MsG0380011495.01.T01:CDS
TGTTGTCCCTCTGGTTGCCG+TGG 0.608787 3:-396273 None:intergenic
CCAGCAATTACATTCATTAG+GGG 0.609332 3:+397703 MsG0380011495.01.T01:intron
AGGGTTTGATGTGGTAGACA+AGG 0.614118 3:+400258 MsG0380011495.01.T01:intron
TTAGTTCAGAATATCAATGG+AGG 0.620340 3:+397863 MsG0380011495.01.T01:CDS
TGTTGGCCAACTCAGTTGGG+TGG 0.627367 3:-400378 None:intergenic
ACACAGTGCAACAAATGAGA+AGG 0.629161 3:+396996 MsG0380011495.01.T01:CDS
ATTACCTAATGCATCGACGA+AGG 0.630153 3:-396439 None:intergenic
TGCCTTGGCTAGTAAAATGT+TGG 0.633274 3:-400395 None:intergenic
TAGTTCAGAATATCAATGGA+GGG 0.636717 3:+397864 MsG0380011495.01.T01:CDS
ATCAACCCATACGTGTACAA+AGG 0.639607 3:-400598 None:intergenic
TTATGATACAGGGTTTGATG+TGG 0.642111 3:+400249 MsG0380011495.01.T01:intron
TCGCCAAATATGAAGAAACA+TGG 0.643194 3:-396300 None:intergenic
GGGTTTGATGTGGTAGACAA+GGG 0.645221 3:+400259 MsG0380011495.01.T01:intron
GTGGTAGACAAGGGATGCTG+TGG 0.654624 3:+400268 MsG0380011495.01.T01:CDS
GCGAGCGTAGTCTTGAAGAA+GGG 0.654662 3:-397170 None:intergenic
TGTGGTGTTGGCAGAAACAA+TGG 0.658260 3:+400286 MsG0380011495.01.T01:CDS
CTATAAGACAACACACACCA+TGG 0.664970 3:-400558 None:intergenic
TATGGCATCGACTTCCCACA+AGG 0.673822 3:+396387 MsG0380011495.01.T01:CDS
CCATTGGTGAAGCGACCGGT+GGG 0.674337 3:-396411 None:intergenic
ATATTGATCATAAATGTCCA+TGG 0.677023 3:+400541 MsG0380011495.01.T01:three_prime_UTR
TGGAGCAGCAGGCATCAGAG+AGG 0.700418 3:+396795 MsG0380011495.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAACAAAAAAAAAAG+GGG - Chr3:398457-398476 None:intergenic 10.0%
!! AACATATATATATTTAAGTA+GGG + Chr3:399865-399884 MsG0380011495.01.T01:intron 10.0%
!! TAACATATATATATTTAAGT+AGG + Chr3:399864-399883 MsG0380011495.01.T01:intron 10.0%
!!! TACTATATTTTCTTAATTTT+GGG + Chr3:398604-398623 MsG0380011495.01.T01:intron 10.0%
!!! TAGTTTGTTAATTTATTTAA+AGG - Chr3:399054-399073 None:intergenic 10.0%
!!! TATGAAATATATTTTTAAGT+AGG - Chr3:398817-398836 None:intergenic 10.0%
!!! TTACTATATTTTCTTAATTT+TGG + Chr3:398603-398622 MsG0380011495.01.T01:intron 10.0%
!! AAGTTAAAATATAGTCAAAT+TGG + Chr3:399329-399348 MsG0380011495.01.T01:intron 15.0%
!! AGGAAAACATATATTATTTA+TGG - Chr3:398527-398546 None:intergenic 15.0%
!! ATAAAAATAGTTTATGCATA+AGG - Chr3:399304-399323 None:intergenic 15.0%
!! ATAAATAAATTCTCTTATAG+TGG + Chr3:396496-396515 MsG0380011495.01.T01:intron 15.0%
!! ATATGTATTCATACTAATTT+AGG + Chr3:399201-399220 MsG0380011495.01.T01:intron 15.0%
!! ATTAAGTGATTATACAAATT+GGG + Chr3:399753-399772 MsG0380011495.01.T01:intron 15.0%
!!! ACTATATTTTCTTAATTTTG+GGG + Chr3:398605-398624 MsG0380011495.01.T01:intron 15.0%
!!! TTTTGAATCATTCTTTAAAT+CGG - Chr3:396611-396630 None:intergenic 15.0%
!! AAAAAAATTAAGTGAAAGAG+AGG + Chr3:399600-399619 MsG0380011495.01.T01:intron 20.0%
!! AATAATATATGCATTTGCTT+AGG - Chr3:397057-397076 None:intergenic 20.0%
!! AATGAAACTAATGCTTTAAT+GGG - Chr3:398410-398429 None:intergenic 20.0%
!! ATACAAAAAAGAAATGATTC+AGG + Chr3:399694-399713 MsG0380011495.01.T01:intron 20.0%
!! GATTAAGTGATTATACAAAT+TGG + Chr3:399752-399771 MsG0380011495.01.T01:intron 20.0%
!! TTAAGTGATTATACAAATTG+GGG + Chr3:399754-399773 MsG0380011495.01.T01:intron 20.0%
!!! AAGTTGCATTTTTATTTTAC+CGG - Chr3:399515-399534 None:intergenic 20.0%
!!! AATACATTACCTAGAATTTT+AGG - Chr3:398572-398591 None:intergenic 20.0%
!!! AATTTTCTTTTTATGTATGC+AGG + Chr3:396931-396950 MsG0380011495.01.T01:intron 20.0%
!!! ATTTTCTTTTTATGTATGCA+GGG + Chr3:396932-396951 MsG0380011495.01.T01:intron 20.0%
!!! GAAAACGTATATTTTTTTCA+GGG - Chr3:398550-398569 None:intergenic 20.0%
!!! GTTACTTCCTTTTTTTTATT+CGG - Chr3:399848-399867 None:intergenic 20.0%
!!! TTATTTTTTGATCCATAAGT+AGG - Chr3:398787-398806 None:intergenic 20.0%
! AAATGGTATGAATGAGTTAA+CGG + Chr3:397545-397564 MsG0380011495.01.T01:intron 25.0%
! AAGAACTTCTAAACATGAAA+GGG + Chr3:399574-399593 MsG0380011495.01.T01:intron 25.0%
! AAGAATATATATGCAATACC+AGG - Chr3:396834-396853 None:intergenic 25.0%
! AGCAAATGCATATATTATTC+AGG + Chr3:397058-397077 MsG0380011495.01.T01:CDS 25.0%
! AGCATTAAATGGAAAATCAA+TGG + Chr3:397943-397962 MsG0380011495.01.T01:CDS 25.0%
! ATATATATTTAAGTAGGGCT+AGG + Chr3:399870-399889 MsG0380011495.01.T01:intron 25.0%
! ATATGCCTATAATAGGTAAA+AGG - Chr3:398025-398044 None:intergenic 25.0%
! ATATTGATCATAAATGTCCA+TGG + Chr3:400541-400560 MsG0380011495.01.T01:three_prime_UTR 25.0%
! ATTGAATCTACATATATAGC+TGG + Chr3:397237-397256 MsG0380011495.01.T01:intron 25.0%
! CAATTAGTTCAGAATATCAA+TGG + Chr3:397860-397879 MsG0380011495.01.T01:CDS 25.0%
! CCTAAAAATATGCCTATAAT+AGG - Chr3:398032-398051 None:intergenic 25.0%
! CCTAATCATAAAATAGAAAC+CGG + Chr3:396542-396561 MsG0380011495.01.T01:intron 25.0%
! CTAATCATAAAATAGAAACC+GGG + Chr3:396543-396562 MsG0380011495.01.T01:intron 25.0%
! CTACTCATGTATAATATATG+TGG - Chr3:398123-398142 None:intergenic 25.0%
! GAATCATAACTTATGATACA+GGG + Chr3:400239-400258 MsG0380011495.01.T01:intron 25.0%
! GAATGAAACTAATGCTTTAA+TGG - Chr3:398411-398430 None:intergenic 25.0%
! GCAAATGCATATATTATTCA+GGG + Chr3:397059-397078 MsG0380011495.01.T01:CDS 25.0%
! GCATTAAATGGAAAATCAAT+GGG + Chr3:397944-397963 MsG0380011495.01.T01:CDS 25.0%
! GCTATATATGTAGATTCAAT+TGG - Chr3:397237-397256 None:intergenic 25.0%
! TAAGTGATTATACAAATTGG+GGG + Chr3:399755-399774 MsG0380011495.01.T01:intron 25.0%
! TAATCATAAAATAGAAACCG+GGG + Chr3:396544-396563 MsG0380011495.01.T01:intron 25.0%
! TATGAATTAGCACGTATTAA+TGG + Chr3:397773-397792 MsG0380011495.01.T01:CDS 25.0%
! TGAATCATAACTTATGATAC+AGG + Chr3:400238-400257 MsG0380011495.01.T01:intron 25.0%
! TGATACTTTGACAAAAAACA+AGG - Chr3:398187-398206 None:intergenic 25.0%
! TTAATACGTGCTAATTCATA+TGG - Chr3:397773-397792 None:intergenic 25.0%
! TTAATTTACTCACAGATAGT+TGG - Chr3:397195-397214 None:intergenic 25.0%
!! ATACGTTTTCCTAAAATTCT+AGG + Chr3:398560-398579 MsG0380011495.01.T01:intron 25.0%
!! CCTATTATAGGCATATTTTT+AGG + Chr3:398029-398048 MsG0380011495.01.T01:intron 25.0%
!! CTCGACTCTTTATTTAAAAT+AGG + Chr3:399486-399505 MsG0380011495.01.T01:intron 25.0%
!! TTTTCTTTTTATGTATGCAG+GGG + Chr3:396933-396952 MsG0380011495.01.T01:intron 25.0%
!!! AATCATTTGTTTCTAACGTT+AGG + Chr3:396583-396602 MsG0380011495.01.T01:intron 25.0%
!!! ATCATTTGTTTCTAACGTTA+GGG + Chr3:396584-396603 MsG0380011495.01.T01:intron 25.0%
!!! GGAAAACGTATATTTTTTTC+AGG - Chr3:398551-398570 None:intergenic 25.0%
!!! TTGATAATGGAAACAACAAT+GGG + Chr3:396331-396350 MsG0380011495.01.T01:CDS 25.0%
AAAAAAAGGGGAGAAATGAA+TGG - Chr3:398445-398464 None:intergenic 30.0%
AAATTTCCTTTGTACACGTA+TGG + Chr3:400592-400611 MsG0380011495.01.T01:three_prime_UTR 30.0%
AATGACATCTAACCTACTTA+TGG + Chr3:398772-398791 MsG0380011495.01.T01:intron 30.0%
AATTTCCTTTGTACACGTAT+GGG + Chr3:400593-400612 MsG0380011495.01.T01:three_prime_UTR 30.0%
ACGTGTACCGAATAAAAAAA+AGG + Chr3:399838-399857 MsG0380011495.01.T01:intron 30.0%
AGCACACATTAATTCAACAT+TGG + Chr3:396862-396881 MsG0380011495.01.T01:intron 30.0%
AGCGAAAATAAAAATGGAAG+TGG - Chr3:398097-398116 None:intergenic 30.0%
ATGCATATATTATTCAGGGT+TGG + Chr3:397063-397082 MsG0380011495.01.T01:CDS 30.0%
CAACAAAGTTGTCAATCAAA+TGG - Chr3:398160-398179 None:intergenic 30.0%
CACCAAATTTATGTCCAAAA+AGG + Chr3:399789-399808 MsG0380011495.01.T01:intron 30.0%
CATGTTAAGCAACCAAAAAA+TGG - Chr3:399006-399025 None:intergenic 30.0%
CGAAAATAAAAATGGAAGTG+GGG - Chr3:398095-398114 None:intergenic 30.0%
CTACATATATAGCTGGATAA+TGG + Chr3:397244-397263 MsG0380011495.01.T01:intron 30.0%
GAAAATAAAAATGGAAGTGG+GGG - Chr3:398094-398113 None:intergenic 30.0%
GAAGAACTTCTAAACATGAA+AGG + Chr3:399573-399592 MsG0380011495.01.T01:intron 30.0%
GACTTATGTGTATGCTATAA+GGG - Chr3:399282-399301 None:intergenic 30.0%
GCCAATTGTTGGATATTAAT+GGG - Chr3:400448-400467 None:intergenic 30.0%
GCGAAAATAAAAATGGAAGT+GGG - Chr3:398096-398115 None:intergenic 30.0%
GTTTAGAAGTTCTTCTGATT+CGG - Chr3:399568-399587 None:intergenic 30.0%
TAAGACCTGAGTTAAAATAC+TGG - Chr3:397838-397857 None:intergenic 30.0%
TAGTTCAGAATATCAATGGA+GGG + Chr3:397864-397883 MsG0380011495.01.T01:CDS 30.0%
TATATGCCAGAAAAGAATGA+GGG - Chr3:398338-398357 None:intergenic 30.0%
TATCTCACCACTATAGTAAT+AGG - Chr3:400069-400088 None:intergenic 30.0%
TATCTGGTCAGTTAATTCAT+AGG - Chr3:397597-397616 None:intergenic 30.0%
TCATATTGTTCATTTGTGTG+TGG + Chr3:400494-400513 MsG0380011495.01.T01:three_prime_UTR 30.0%
TCCAGCAATTACATTCATTA+GGG + Chr3:397702-397721 MsG0380011495.01.T01:intron 30.0%
TCCCATTAATATCCAACAAT+TGG + Chr3:400444-400463 MsG0380011495.01.T01:CDS 30.0%
TGCATATATTATTCAGGGTT+GGG + Chr3:397064-397083 MsG0380011495.01.T01:CDS 30.0%
TGCCAATTGTTGGATATTAA+TGG - Chr3:400449-400468 None:intergenic 30.0%
TTAAAACCCATAGCATTTGA+AGG + Chr3:399915-399934 MsG0380011495.01.T01:intron 30.0%
TTAGTTCAGAATATCAATGG+AGG + Chr3:397863-397882 MsG0380011495.01.T01:CDS 30.0%
TTATTGAACAGTGTATGTTG+AGG + Chr3:397277-397296 MsG0380011495.01.T01:intron 30.0%
! ACAAACATTTTGTAGGACTT+AGG - Chr3:396242-396261 None:intergenic 30.0%
! ATAATTGCAGCTCAACTTTT+GGG + Chr3:396700-396719 MsG0380011495.01.T01:intron 30.0%
! ATCGTGGGAAATATTTGTTT+TGG + Chr3:400347-400366 MsG0380011495.01.T01:CDS 30.0%
! ATTTACCTAATAGTGTCGTT+TGG + Chr3:399627-399646 MsG0380011495.01.T01:intron 30.0%
! CAAAAAATGTAAGAGTGTGA+TGG + Chr3:400120-400139 MsG0380011495.01.T01:intron 30.0%
! CAACACCTTTTACCTATTAT+AGG + Chr3:398017-398036 MsG0380011495.01.T01:intron 30.0%
! CCGGTTTCTATTTTATGATT+AGG - Chr3:396545-396564 None:intergenic 30.0%
! CTCCTTTTTGGACATAAATT+TGG - Chr3:399794-399813 None:intergenic 30.0%
! CTTTATTTAAAATAGGCCTC+CGG + Chr3:399493-399512 MsG0380011495.01.T01:intron 30.0%
! GTAATCATGACAAAAGTACA+TGG + Chr3:400178-400197 MsG0380011495.01.T01:intron 30.0%
! TAGACTCTAATTCTCCTTTT+TGG - Chr3:399806-399825 None:intergenic 30.0%
! TATAATTGCAGCTCAACTTT+TGG + Chr3:396699-396718 MsG0380011495.01.T01:intron 30.0%
! TTTCTTTTTATGTATGCAGG+GGG + Chr3:396934-396953 MsG0380011495.01.T01:intron 30.0%
!! ATGGTTTCAAAAGCTGATTT+TGG + Chr3:400197-400216 MsG0380011495.01.T01:intron 30.0%
!! GTTGATAATGGAAACAACAA+TGG + Chr3:396330-396349 MsG0380011495.01.T01:CDS 30.0%
!! TCGTGGGAAATATTTGTTTT+GGG + Chr3:400348-400367 MsG0380011495.01.T01:CDS 30.0%
!! TCTTCACATACTTGTTGTAA+TGG - Chr3:400328-400347 None:intergenic 30.0%
!!! AACGTATATTTTTTTCAGGG+AGG - Chr3:398547-398566 None:intergenic 30.0%
!!! CGCTATTTTGAAATCTAACA+CGG + Chr3:399093-399112 MsG0380011495.01.T01:intron 30.0%
!!! TTGCATTTTTATTTTACCGG+AGG - Chr3:399512-399531 None:intergenic 30.0%
AAAAAATGGCAACTTCGCAT+TGG - Chr3:398992-399011 None:intergenic 35.0%
AAAAACACAAACTTTGCTCC+CGG - Chr3:397896-397915 None:intergenic 35.0%
AACAAGTATGTGAAGATCGT+GGG + Chr3:400332-400351 MsG0380011495.01.T01:CDS 35.0%
AACGTGTTCAACAGCTTATA+TGG - Chr3:399988-400007 None:intergenic 35.0%
AAGAGTTGACAGTATTGTCT+TGG - Chr3:397995-398014 None:intergenic 35.0%
ACATGCTCCTATTACTATAG+TGG + Chr3:400059-400078 MsG0380011495.01.T01:intron 35.0%
ACCTGAGTTAAAATACTGGA+TGG - Chr3:397834-397853 None:intergenic 35.0%
AGCCTCCTATTTCATAGAAA+CGG - Chr3:399468-399487 None:intergenic 35.0%
AGTGCAGATCTAGCATTAAA+TGG + Chr3:397932-397951 MsG0380011495.01.T01:CDS 35.0%
AGTTGATCCATAGAGTCTTA+TGG - Chr3:399169-399188 None:intergenic 35.0%
ATGTGACTAAGAGTCTCAAA+TGG + Chr3:397455-397474 MsG0380011495.01.T01:intron 35.0%
CAAATCCAAACGACACTATT+AGG - Chr3:399635-399654 None:intergenic 35.0%
CAAATGAGAAGGTTCTTTAG+AGG + Chr3:397007-397026 MsG0380011495.01.T01:CDS 35.0%
CAACAGCTTATATGGAAACA+GGG - Chr3:399980-399999 None:intergenic 35.0%
CAGTCATGAAATAGTTGTTC+AGG - Chr3:397102-397121 None:intergenic 35.0%
CCAGCAATTACATTCATTAG+GGG + Chr3:397703-397722 MsG0380011495.01.T01:intron 35.0%
CGTATTAATGGTAACATCAC+CGG + Chr3:397785-397804 MsG0380011495.01.T01:CDS 35.0%
CTATATGCCAGAAAAGAATG+AGG - Chr3:398339-398358 None:intergenic 35.0%
GAGTCTCATTTCAAATGTTG+CGG + Chr3:399225-399244 MsG0380011495.01.T01:intron 35.0%
GAGTTAACGGTTGAGTTATT+TGG + Chr3:397558-397577 MsG0380011495.01.T01:intron 35.0%
GGACTTATGTGTATGCTATA+AGG - Chr3:399283-399302 None:intergenic 35.0%
GTCCAGCAATTACATTCATT+AGG + Chr3:397701-397720 MsG0380011495.01.T01:intron 35.0%
GTGCCATGTTTCTTCATATT+TGG + Chr3:396297-396316 MsG0380011495.01.T01:CDS 35.0%
GTTAATCTTCTCATTGCATC+CGG - Chr3:397807-397826 None:intergenic 35.0%
TCAACAGCTTATATGGAAAC+AGG - Chr3:399981-400000 None:intergenic 35.0%
TCCTACAAAATGTTTGTCTC+AGG + Chr3:396245-396264 MsG0380011495.01.T01:CDS 35.0%
TCGCCAAATATGAAGAAACA+TGG - Chr3:396303-396322 None:intergenic 35.0%
TCTCAAATGGGACAAAAAAG+TGG + Chr3:397468-397487 MsG0380011495.01.T01:intron 35.0%
TGGTGCAGCGAAAATAAAAA+TGG - Chr3:398103-398122 None:intergenic 35.0%
TGTGACTAAGAGTCTCAAAT+GGG + Chr3:397456-397475 MsG0380011495.01.T01:intron 35.0%
TTACAGCAGTTGGTCAAATT+GGG + Chr3:397741-397760 MsG0380011495.01.T01:CDS 35.0%
TTATGATACAGGGTTTGATG+TGG + Chr3:400249-400268 MsG0380011495.01.T01:intron 35.0%
TTCATGCATGTTTCCATACA+GGG + Chr3:399442-399461 MsG0380011495.01.T01:intron 35.0%
! AAAATGTAAGAGTGTGATGG+TGG + Chr3:400123-400142 MsG0380011495.01.T01:intron 35.0%
! ACCTGAGACAAACATTTTGT+AGG - Chr3:396249-396268 None:intergenic 35.0%
! CATAATTGACTCCTCTAAGA+AGG - Chr3:396771-396790 None:intergenic 35.0%
! GTAATAGGAGCATGTTTCAT+TGG - Chr3:400054-400073 None:intergenic 35.0%
! TTTTCACATTCACGTGTATC+TGG + Chr3:396211-396230 MsG0380011495.01.T01:CDS 35.0%
!! CACATACTTGTTGTAATGGA+AGG - Chr3:400324-400343 None:intergenic 35.0%
!! CTCATTCTTTTCTGGCATAT+AGG + Chr3:398337-398356 MsG0380011495.01.T01:intron 35.0%
!! TCATGTTAACTTGTGCCTAA+TGG - Chr3:399031-399050 None:intergenic 35.0%
!! TCTAAAGCATTGCCAATTGT+TGG - Chr3:400459-400478 None:intergenic 35.0%
!!! AATGCGAAGTTGCCATTTTT+TGG + Chr3:398991-399010 MsG0380011495.01.T01:intron 35.0%
!!! TAGGCATATTTTTAGGCTTG+TGG + Chr3:398036-398055 MsG0380011495.01.T01:intron 35.0%
AAAATGTTGGCCAACTCAGT+TGG - Chr3:400385-400404 None:intergenic 40.0%
AAACCCCTTGCTCTTGAATT+TGG - Chr3:396745-396764 None:intergenic 40.0%
AAAGTGATCGTTACAGCAGT+TGG + Chr3:397731-397750 MsG0380011495.01.T01:CDS 40.0%
AAATGTTGGCCAACTCAGTT+GGG - Chr3:400384-400403 None:intergenic 40.0%
AAATTCAAGAGCAAGGGGTT+TGG + Chr3:396744-396763 MsG0380011495.01.T01:CDS 40.0%
AATTAGCCCTAGCAAGTGTT+AGG - Chr3:396359-396378 None:intergenic 40.0%
ACACAGTGCAACAAATGAGA+AGG + Chr3:396996-397015 MsG0380011495.01.T01:CDS 40.0%
ACTGAGCAAGTGACAAACTT+TGG + Chr3:396971-396990 MsG0380011495.01.T01:CDS 40.0%
AGAAAGTTAACCTCAAGCAG+TGG - Chr3:398741-398760 None:intergenic 40.0%
AGAGGAGTCAATTATGCATC+TGG + Chr3:396775-396794 MsG0380011495.01.T01:CDS 40.0%
AGCCAGAAAGTTTGAGTAGT+GGG - Chr3:398715-398734 None:intergenic 40.0%
AGGGCTAATTATCGACCTTA+TGG + Chr3:396369-396388 MsG0380011495.01.T01:CDS 40.0%
ATCAACCCATACGTGTACAA+AGG - Chr3:400601-400620 None:intergenic 40.0%
ATTTGTCACTCCTTCGTTGT+GGG + Chr3:399650-399669 MsG0380011495.01.T01:intron 40.0%
CAACAAGTATGTGAAGATCG+TGG + Chr3:400331-400350 MsG0380011495.01.T01:CDS 40.0%
CCCCTAATGAATGTAATTGC+TGG - Chr3:397706-397725 None:intergenic 40.0%
CTATAAGACAACACACACCA+TGG - Chr3:400561-400580 None:intergenic 40.0%
CTTCATATTTGGCGACTCAT+TGG + Chr3:396308-396327 MsG0380011495.01.T01:CDS 40.0%
GACTAGACCATAAGACTCTA+TGG + Chr3:399159-399178 MsG0380011495.01.T01:intron 40.0%
GTGATTATACAAATTGGGGG+TGG + Chr3:399758-399777 MsG0380011495.01.T01:intron 40.0%
GTGGGAAAGGAGAAAATGAA+TGG + Chr3:399668-399687 MsG0380011495.01.T01:intron 40.0%
GTTACAGCAGTTGGTCAAAT+TGG + Chr3:397740-397759 MsG0380011495.01.T01:CDS 40.0%
GTTCATGCATGTTTCCATAC+AGG + Chr3:399441-399460 MsG0380011495.01.T01:intron 40.0%
TAACTGACCAGATAACTCCT+CGG + Chr3:397603-397622 MsG0380011495.01.T01:intron 40.0%
TATACAAATTGGGGGTGGTT+TGG + Chr3:399763-399782 MsG0380011495.01.T01:intron 40.0%
TCCTCCAAATTCAAGAGCAA+GGG + Chr3:396738-396757 MsG0380011495.01.T01:CDS 40.0%
TCTTTAACATGTGCCCTTGA+GGG - Chr3:398900-398919 None:intergenic 40.0%
TGCCTTGGCTAGTAAAATGT+TGG - Chr3:400398-400417 None:intergenic 40.0%
TTCCTCCAAATTCAAGAGCA+AGG + Chr3:396737-396756 MsG0380011495.01.T01:CDS 40.0%
TTCTTTAACATGTGCCCTTG+AGG - Chr3:398901-398920 None:intergenic 40.0%
TTGTGAACTGTATGATGCCT+TGG - Chr3:400413-400432 None:intergenic 40.0%
! ATTACCTAATGCATCGACGA+AGG - Chr3:396442-396461 None:intergenic 40.0%
! GGGAGCAAAGTTTGTGTTTT+TGG + Chr3:397895-397914 MsG0380011495.01.T01:CDS 40.0%
! GTTGCTTAACATGTGCCATT+AGG + Chr3:399013-399032 MsG0380011495.01.T01:intron 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + Chr3:398883-398902 MsG0380011495.01.T01:intron 40.0%
!! ATGTTAACTTGTGCCCTCAA+GGG + Chr3:398884-398903 MsG0380011495.01.T01:intron 40.0%
!!! GCATATTTTTAGGCTTGTGG+CGG + Chr3:398039-398058 MsG0380011495.01.T01:intron 40.0%
!!! GCCATCCAGTATTTTAACTC+AGG + Chr3:397830-397849 MsG0380011495.01.T01:CDS 40.0%
AAGTTAACCTCAAGCAGTGG+CGG - Chr3:398738-398757 None:intergenic 45.0%
ACTTTCACAAGTGCCTGTGT+CGG + Chr3:400011-400030 MsG0380011495.01.T01:intron 45.0%
AGCTGGACCTTCAAATGCTA+TGG - Chr3:399925-399944 None:intergenic 45.0%
AGCTTATATGGAAACAGGGC+CGG - Chr3:399976-399995 None:intergenic 45.0%
AGGGCAGATGCAAAAGCTTT+AGG - Chr3:397154-397173 None:intergenic 45.0%
AGGGTTTGATGTGGTAGACA+AGG + Chr3:400258-400277 MsG0380011495.01.T01:intron 45.0%
ATGGGATCCTAACACTTGCT+AGG + Chr3:396349-396368 MsG0380011495.01.T01:CDS 45.0%
CAGGGCCGTTTCTATGAAAT+AGG + Chr3:399460-399479 MsG0380011495.01.T01:intron 45.0%
CCAGAAAGTTTGAGTAGTGG+GGG - Chr3:398713-398732 None:intergenic 45.0%
CCTCCAAATTCAAGAGCAAG+GGG + Chr3:396739-396758 MsG0380011495.01.T01:CDS 45.0%
GAAACCGGGGAACTATAATG+CGG + Chr3:396557-396576 MsG0380011495.01.T01:intron 45.0%
GAGCCAGAAAGTTTGAGTAG+TGG - Chr3:398716-398735 None:intergenic 45.0%
GATTTGTCACTCCTTCGTTG+TGG + Chr3:399649-399668 MsG0380011495.01.T01:intron 45.0%
GCCAGAAAGTTTGAGTAGTG+GGG - Chr3:398714-398733 None:intergenic 45.0%
GCTGGACCTTCAAATGCTAT+GGG - Chr3:399924-399943 None:intergenic 45.0%
GGCCGTTTCTATGAAATAGG+AGG + Chr3:399463-399482 MsG0380011495.01.T01:intron 45.0%
GGGTTTGATGTGGTAGACAA+GGG + Chr3:400259-400278 MsG0380011495.01.T01:intron 45.0%
TAGCATTTGAAGGTCCAGCT+TGG + Chr3:399925-399944 MsG0380011495.01.T01:intron 45.0%
TCGAGTTTATCTACCGACAC+AGG - Chr3:400027-400046 None:intergenic 45.0%
TGCCAGAAAAGAATGAGGGA+CGG - Chr3:398334-398353 None:intergenic 45.0%
TTAGCCGCATTATAGTTCCC+CGG - Chr3:396564-396583 None:intergenic 45.0%
TTCATAGAAACGGCCCTGTA+TGG - Chr3:399458-399477 None:intergenic 45.0%
TTTCTCCTTTCCCACAACGA+AGG - Chr3:399663-399682 None:intergenic 45.0%
! AATTATGCATCTGGAGCAGC+AGG + Chr3:396784-396803 MsG0380011495.01.T01:CDS 45.0%
! GGCCAACATTTTACTAGCCA+AGG + Chr3:400393-400412 MsG0380011495.01.T01:CDS 45.0%
! GTTTGTCTCAGGTTTTGCCA+CGG + Chr3:396256-396275 MsG0380011495.01.T01:CDS 45.0%
! TGGGATCCTAACACTTGCTA+GGG + Chr3:396350-396369 MsG0380011495.01.T01:CDS 45.0%
! TTCCGTCCCTCATTCTTTTC+TGG + Chr3:398329-398348 MsG0380011495.01.T01:intron 45.0%
!! GGCGACTCATTGGTTGATAA+TGG + Chr3:396318-396337 MsG0380011495.01.T01:CDS 45.0%
!! TGTGGTGTTGGCAGAAACAA+TGG + Chr3:400286-400305 MsG0380011495.01.T01:CDS 45.0%
!! AAAATAAAACAAAAAAAAAA+GGG - Chr3:398458-398477 None:intergenic 5.0%
!! TAAAATAAAACAAAAAAAAA+AGG - Chr3:398459-398478 None:intergenic 5.0%
!! TAATATATTGAAATATTAAA+TGG + Chr3:397528-397547 MsG0380011495.01.T01:intron 5.0%
!!! TAAATGTTATAATTATTTTT+TGG - Chr3:398649-398668 None:intergenic 5.0%
ACCTTGCATTCTCCAAGGTC+CGG + Chr3:399954-399973 MsG0380011495.01.T01:intron 50.0%
AGAGGAAACAGGCAGTAACC+TGG + Chr3:396813-396832 MsG0380011495.01.T01:CDS 50.0%
AGCTACGTTTGCAACTCTGC+AGG + Chr3:398062-398081 MsG0380011495.01.T01:intron 50.0%
AGGGGTTTGGACCTTCTTAG+AGG + Chr3:396757-396776 MsG0380011495.01.T01:CDS 50.0%
ATCGACGAAGGTTCGACCAT+TGG - Chr3:396430-396449 None:intergenic 50.0%
CCCCCACTACTCAAACTTTC+TGG + Chr3:398710-398729 MsG0380011495.01.T01:intron 50.0%
CCCCTTGCTCTTGAATTTGG+AGG - Chr3:396742-396761 None:intergenic 50.0%
CGAACCTTCGTCGATGCATT+AGG + Chr3:396435-396454 MsG0380011495.01.T01:CDS 50.0%
TATCAATGGAGGGCAGCTTC+CGG + Chr3:397874-397893 MsG0380011495.01.T01:CDS 50.0%
TCACTCCTTCGTTGTGGGAA+AGG + Chr3:399655-399674 MsG0380011495.01.T01:intron 50.0%
TGACCAGATAACTCCTCGGT+TGG + Chr3:397607-397626 MsG0380011495.01.T01:intron 50.0%
TGAGCACCTTGCATTCTCCA+AGG + Chr3:399949-399968 MsG0380011495.01.T01:intron 50.0%
TGATAAGTAACCGCCAACCG+AGG - Chr3:397623-397642 None:intergenic 50.0%
TGCTTTCCACCCAACTGAGT+TGG + Chr3:400372-400391 MsG0380011495.01.T01:CDS 50.0%
TGTGGGAAGTCGATGCCATA+AGG - Chr3:396387-396406 None:intergenic 50.0%
! GCGAGCGTAGTCTTGAAGAA+GGG - Chr3:397173-397192 None:intergenic 50.0%
!! TATGGCATCGACTTCCCACA+AGG + Chr3:396387-396406 MsG0380011495.01.T01:CDS 50.0%
ATCAATGGAGGGCAGCTTCC+GGG + Chr3:397875-397894 MsG0380011495.01.T01:CDS 55.0%
CCAGATAACTCCTCGGTTGG+CGG + Chr3:397610-397629 MsG0380011495.01.T01:intron 55.0%
GACAAGGGATGCTGTGGTGT+TGG + Chr3:400274-400293 MsG0380011495.01.T01:CDS 55.0%
GCAGGCATCAGAGAGGAAAC+AGG + Chr3:396802-396821 MsG0380011495.01.T01:CDS 55.0%
GTGGTAGACAAGGGATGCTG+TGG + Chr3:400268-400287 MsG0380011495.01.T01:CDS 55.0%
TCGACCATTGGTGAAGCGAC+CGG - Chr3:396418-396437 None:intergenic 55.0%
TGTTGGCCAACTCAGTTGGG+TGG - Chr3:400381-400400 None:intergenic 55.0%
! GGCGAGCGTAGTCTTGAAGA+AGG - Chr3:397174-397193 None:intergenic 55.0%
! GTTTTGCCACGGCAACCAGA+GGG + Chr3:396267-396286 MsG0380011495.01.T01:CDS 55.0%
! TGCAAGGTGCTCAACCAAGC+TGG - Chr3:399942-399961 None:intergenic 55.0%
!! CATGGCACTTGTTGTCCCTC+TGG - Chr3:396285-396304 None:intergenic 55.0%
ACCATTGGTGAAGCGACCGG+TGG - Chr3:396415-396434 None:intergenic 60.0%
ATGGAAACAGGGCCGGACCT+TGG - Chr3:399969-399988 None:intergenic 60.0%
CCATTGGTGAAGCGACCGGT+GGG - Chr3:396414-396433 None:intergenic 60.0%
CCGCCAACCGAGGAGTTATC+TGG - Chr3:397613-397632 None:intergenic 60.0%
GACTTCCCACAAGGTCCCAC+CGG + Chr3:396396-396415 MsG0380011495.01.T01:CDS 60.0%
GCCGGACCTTGGAGAATGCA+AGG - Chr3:399958-399977 None:intergenic 60.0%
TGGAGCAGCAGGCATCAGAG+AGG + Chr3:396795-396814 MsG0380011495.01.T01:CDS 60.0%
TGTTGTCCCTCTGGTTGCCG+TGG - Chr3:396276-396295 None:intergenic 60.0%
! GGTTTTGCCACGGCAACCAG+AGG + Chr3:396266-396285 MsG0380011495.01.T01:CDS 60.0%
AAGCGACCGGTGGGACCTTG+TGG - Chr3:396405-396424 None:intergenic 65.0%
AGCGACCGGTGGGACCTTGT+GGG - Chr3:396404-396423 None:intergenic 65.0%
CCCACCGGTCGCTTCACCAA+TGG + Chr3:396411-396430 MsG0380011495.01.T01:CDS 65.0%
! TCTGGCTCCGCCACTGCTTG+AGG + Chr3:398728-398747 MsG0380011495.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 396158 400706 396158 ID=MsG0380011495.01;Name=MsG0380011495.01
Chr3 mRNA 396158 400706 396158 ID=MsG0380011495.01.T01;Parent=MsG0380011495.01;Name=MsG0380011495.01.T01;_AED=0.50;_eAED=0.50;_QI=40|1|1|1|1|1|5|229|369
Chr3 exon 400260 400706 400260 ID=MsG0380011495.01.T01:exon:157;Parent=MsG0380011495.01.T01
Chr3 exon 397707 397965 397707 ID=MsG0380011495.01.T01:exon:156;Parent=MsG0380011495.01.T01
Chr3 exon 396953 397201 396953 ID=MsG0380011495.01.T01:exon:155;Parent=MsG0380011495.01.T01
Chr3 exon 396710 396834 396710 ID=MsG0380011495.01.T01:exon:154;Parent=MsG0380011495.01.T01
Chr3 exon 396158 396456 396158 ID=MsG0380011495.01.T01:exon:153;Parent=MsG0380011495.01.T01
Chr3 five_prime_UTR 396158 396197 396158 ID=MsG0380011495.01.T01:five_prime_utr;Parent=MsG0380011495.01.T01
Chr3 CDS 396198 396456 396198 ID=MsG0380011495.01.T01:cds;Parent=MsG0380011495.01.T01
Chr3 CDS 396710 396834 396710 ID=MsG0380011495.01.T01:cds;Parent=MsG0380011495.01.T01
Chr3 CDS 396953 397201 396953 ID=MsG0380011495.01.T01:cds;Parent=MsG0380011495.01.T01
Chr3 CDS 397707 397965 397707 ID=MsG0380011495.01.T01:cds;Parent=MsG0380011495.01.T01
Chr3 CDS 400260 400477 400260 ID=MsG0380011495.01.T01:cds;Parent=MsG0380011495.01.T01
Chr3 three_prime_UTR 400478 400706 400478 ID=MsG0380011495.01.T01:three_prime_utr;Parent=MsG0380011495.01.T01
Gene Sequence

>MsG0380011495.01.T01

ATGAAGCATTTTATTTTCACATTCACGTGTATCTGGCTGAGCCTAAGTCCTACAAAATGTTTGTCTCAGGTTTTGCCACGGCAACCAGAGGGACAACAAGTGCCATGTTTCTTCATATTTGGCGACTCATTGGTTGATAATGGAAACAACAATGGGATCCTAACACTTGCTAGGGCTAATTATCGACCTTATGGCATCGACTTCCCACAAGGTCCCACCGGTCGCTTCACCAATGGTCGAACCTTCGTCGATGCATTAGCTCAACTTTTGGGTTTTCGAGCATATATTCCTCCAAATTCAAGAGCAAGGGGTTTGGACCTTCTTAGAGGAGTCAATTATGCATCTGGAGCAGCAGGCATCAGAGAGGAAACAGGCAGTAACCTGGGGGCTCATACATCAATGACTGAGCAAGTGACAAACTTTGGAAACACAGTGCAACAAATGAGAAGGTTCTTTAGAGGAGACAATGATGCACTTAATAGCTACCTAAGCAAATGCATATATTATTCAGGGTTGGGAAGCAATGATTACCTGAACAACTATTTCATGACTGATTTTTATTCAACTAGCACTCAGTACACACCTAAAGCTTTTGCATCTGCCCTTCTTCAAGACTACGCTCGCCAACTATCTCAATTACATTCATTAGGGGCAAGAAAAGTGATCGTTACAGCAGTTGGTCAAATTGGGTGCATACCATATGAATTAGCACGTATTAATGGTAACATCACCGGATGCAATGAGAAGATTAACAATGCCATCCAGTATTTTAACTCAGGTCTTAAGCAATTAGTTCAGAATATCAATGGAGGGCAGCTTCCGGGAGCAAAGTTTGTGTTTTTGGACTTTTATCAAAGCAGTGCAGATCTAGCATTAAATGGAAAATCAATGGGGTTTGATGTGGTAGACAAGGGATGCTGTGGTGTTGGCAGAAACAATGGACAAATCACTTGCCTTCCATTACAACAAGTATGTGAAGATCGTGGGAAATATTTGTTTTGGGATGCTTTCCACCCAACTGAGTTGGCCAACATTTTACTAGCCAAGGCATCATACAGTTCACAATCATACACTTCTCCCATTAATATCCAACAATTGGCAATGCTTTAG

Protein sequence

>MsG0380011495.01.T01

MKHFIFTFTCIWLSLSPTKCLSQVLPRQPEGQQVPCFFIFGDSLVDNGNNNGILTLARANYRPYGIDFPQGPTGRFTNGRTFVDALAQLLGFRAYIPPNSRARGLDLLRGVNYASGAAGIREETGSNLGAHTSMTEQVTNFGNTVQQMRRFFRGDNDALNSYLSKCIYYSGLGSNDYLNNYFMTDFYSTSTQYTPKAFASALLQDYARQLSQLHSLGARKVIVTAVGQIGCIPYELARINGNITGCNEKINNAIQYFNSGLKQLVQNINGGQLPGAKFVFLDFYQSSADLALNGKSMGFDVVDKGCCGVGRNNGQITCLPLQQVCEDRGKYLFWDAFHPTELANILLAKASYSSQSYTSPINIQQLAML*