AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010974.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010974.01.T01 MTR_2g095980 85.375 253 15 1 52 282 45 297 6.37e-145 431
MsG0280010974.01.T01 MTR_2g095980 33.613 119 57 1 154 250 430 548 4.80e-15 75.9
MsG0280010974.01.T01 MTR_2g095980 85.375 253 15 1 52 282 45 297 2.83e-144 431
MsG0280010974.01.T01 MTR_2g095980 33.613 119 57 1 154 250 430 548 5.50e-15 75.9
MsG0280010974.01.T01 MTR_4g061610 62.162 259 58 6 56 281 52 303 7.43e-93 295
MsG0280010974.01.T01 MTR_4g061610 33.613 119 57 1 154 250 448 566 2.76e-15 76.6
MsG0280010974.01.T01 MTR_8g070530 53.052 213 71 4 84 271 48 256 3.21e-59 203
MsG0280010974.01.T01 MTR_8g070530 31.933 119 59 1 154 250 401 519 5.23e-13 69.7
MsG0280010974.01.T01 MTR_2g048240 63.333 60 22 0 1 60 1 60 3.97e-21 86.7
MsG0280010974.01.T01 MTR_2g095980 33.613 119 57 1 154 250 175 293 4.51e-15 75.9
MsG0280010974.01.T01 MTR_2g095980 80.952 42 8 0 241 282 1 42 5.52e-13 69.7
MsG0280010974.01.T01 MTR_8g105590 38.182 110 37 2 165 243 63 172 2.11e-12 67.8
MsG0280010974.01.T01 MTR_5g038420 33.654 104 47 1 163 244 250 353 3.18e-12 66.6
MsG0280010974.01.T01 MTR_5g038420 33.019 106 49 1 163 246 250 355 2.97e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010974.01.T01 AT3G45780 57.874 254 60 5 65 271 73 326 3.48e-83 270
MsG0280010974.01.T01 AT3G45780 32.773 119 58 1 154 250 465 583 2.33e-13 70.9
MsG0280010974.01.T01 AT3G45780 57.874 254 60 5 65 271 73 326 3.48e-83 270
MsG0280010974.01.T01 AT3G45780 32.773 119 58 1 154 250 465 583 2.33e-13 70.9
MsG0280010974.01.T01 AT5G58140 49.107 224 77 5 71 271 53 262 2.31e-55 190
MsG0280010974.01.T01 AT5G58140 28.272 191 113 2 84 250 307 497 1.30e-13 71.6
MsG0280010974.01.T01 AT5G58140 49.107 224 77 5 71 271 53 262 1.53e-54 190
MsG0280010974.01.T01 AT5G58140 28.272 191 113 2 84 250 307 497 1.40e-13 71.6
MsG0280010974.01.T01 AT5G58140 49.107 224 77 5 71 271 53 262 2.68e-54 189
MsG0280010974.01.T01 AT5G58140 28.272 191 113 2 84 250 307 497 1.35e-13 71.6
MsG0280010974.01.T01 AT5G58140 49.107 224 77 5 71 271 53 262 2.68e-54 189
MsG0280010974.01.T01 AT5G58140 28.272 191 113 2 84 250 307 497 1.35e-13 71.6
MsG0280010974.01.T01 AT5G58140 49.107 224 77 5 71 271 53 262 2.68e-54 189
MsG0280010974.01.T01 AT5G58140 28.272 191 113 2 84 250 307 497 1.35e-13 71.6
MsG0280010974.01.T01 AT5G58140 49.107 224 77 5 71 271 53 262 2.68e-54 189
MsG0280010974.01.T01 AT5G58140 28.272 191 113 2 84 250 307 497 1.35e-13 71.6
MsG0280010974.01.T01 AT5G58140 49.107 224 77 5 71 271 53 262 2.68e-54 189
MsG0280010974.01.T01 AT5G58140 28.272 191 113 2 84 250 307 497 1.35e-13 71.6
MsG0280010974.01.T01 AT2G02710 31.618 136 69 2 146 259 241 374 3.24e-15 75.9
MsG0280010974.01.T01 AT2G02710 31.159 138 69 3 146 259 241 376 1.61e-13 70.9
MsG0280010974.01.T01 AT1G68050 37.273 110 38 2 165 243 55 164 2.09e-13 70.9

Find 88 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTATCAATGAGGTCAAATT+TGG 0.211348 2:-77781914 None:intergenic
AATAACTCTGGCAGAGTTTC+CGG 0.217366 2:+77785469 MsG0280010974.01.T01:CDS
GGCAATGTGCTCAAGTTAAT+TGG 0.247139 2:+77786173 MsG0280010974.01.T01:CDS
CCAAGTTGATTTAATCGATA+TGG 0.249029 2:+77782023 MsG0280010974.01.T01:CDS
TCCCACTCCTTGTGGTTTCC+CGG 0.270958 2:-77785389 None:intergenic
CTTATCTTTGCCACGTCTTC+CGG 0.278102 2:-77786041 None:intergenic
TCAACAAACTTTCGTGGTTT+CGG 0.309777 2:+77785567 MsG0280010974.01.T01:CDS
AGAAGGATGGAACTCCATTC+TGG 0.318494 2:+77786114 MsG0280010974.01.T01:CDS
TGCTCTCTGTGCCGCGGCGC+CGG 0.321129 2:-77785329 None:intergenic
TGCATACATAATCGGGTAAT+CGG 0.321776 2:-77785602 None:intergenic
CCTGCACTTGCATACATAAT+CGG 0.326867 2:-77785610 None:intergenic
TGGTCTCTATCTTTAAAGTT+TGG 0.333419 2:-77782003 None:intergenic
ACAATAATAACTACAGAGTA+TGG 0.337998 2:+77781944 MsG0280010974.01.T01:CDS
ATATGATGGTATGGTAATAT+TGG 0.371633 2:+77787884 MsG0280010974.01.T01:CDS
TCATATCGAATCAAGGATTC+AGG 0.371876 2:-77787867 None:intergenic
CTCAGAACAGACGCTGAAAC+CGG 0.376841 2:+77785370 MsG0280010974.01.T01:CDS
ATGAAGTCACCAACACTTCA+TGG 0.386276 2:+77785284 MsG0280010974.01.T01:CDS
TTTATTTAAAATTACATCAA+TGG 0.399317 2:-77787960 None:intergenic
ACGCGGGTTTCCGAGAGTTT+CGG 0.399881 2:+77785516 MsG0280010974.01.T01:CDS
GAGAGCAGCCGAGTGGGGTT+TGG 0.401355 2:+77785345 MsG0280010974.01.T01:CDS
CACTTCATGGATGGCAATCA+AGG 0.403055 2:+77785297 MsG0280010974.01.T01:CDS
TAATCGCAATGAAATTGAAA+TGG 0.418655 2:-77787919 None:intergenic
CGGAAGACGTGGCAAAGATA+AGG 0.436474 2:+77786042 MsG0280010974.01.T01:CDS
CATAATCGGGTAATCGGGTT+TGG 0.439804 2:-77785596 None:intergenic
GAGTATGGAGATTCAAGATT+AGG 0.449069 2:+77781959 MsG0280010974.01.T01:CDS
TCCATTCTGTTCATCGTCAC+CGG 0.456704 2:-77785422 None:intergenic
ATTGCCATCATCATCCTTGA+TGG 0.459706 2:-77786156 None:intergenic
CCATATCGATTAAATCAACT+TGG 0.460238 2:-77782023 None:intergenic
GCAATGTGCTCAAGTTAATT+GGG 0.462004 2:+77786174 MsG0280010974.01.T01:CDS
GCATACATAATCGGGTAATC+GGG 0.476217 2:-77785601 None:intergenic
CTGCACTTGCATACATAATC+GGG 0.483989 2:-77785609 None:intergenic
ACAAGGTGCGGATACTAATC+CGG 0.485443 2:+77786022 MsG0280010974.01.T01:CDS
TCTCACTATTTCACCCATCA+AGG 0.490552 2:+77786142 MsG0280010974.01.T01:CDS
GGAAGACGTGGCAAAGATAA+GGG 0.491229 2:+77786043 MsG0280010974.01.T01:CDS
GCAATCAAGGAAGGAGAAAC+CGG 0.495765 2:+77785310 MsG0280010974.01.T01:CDS
ATGGAAAGTTCTCCGGCAAA+AGG 0.497594 2:+77785440 MsG0280010974.01.T01:CDS
AAGGATTCAGGCAACCCATT+GGG 0.499553 2:-77787855 None:intergenic
TAAGGGAAGCATTAGAAGGT+GGG 0.503095 2:+77786060 MsG0280010974.01.T01:CDS
AAGATAAGGGAAGCATTAGA+AGG 0.506363 2:+77786056 MsG0280010974.01.T01:CDS
CAAGCATACGGAAGGGTCAA+AGG 0.512879 2:+77787818 MsG0280010974.01.T01:CDS
AGAAGAATTTACGTCCCAAT+GGG 0.514050 2:+77787841 MsG0280010974.01.T01:CDS
AAAAGGAATTCTAATAACTC+TGG 0.516172 2:+77785457 MsG0280010974.01.T01:CDS
TTCAAATCCTCCGAAACTCT+CGG 0.519638 2:-77785526 None:intergenic
TTTCTAACTCCCACTCCTTG+TGG 0.526938 2:-77785397 None:intergenic
CATACCATCATATCGAATCA+AGG 0.530527 2:-77787874 None:intergenic
GAATCCTTGATTCGATATGA+TGG 0.531200 2:+77787870 MsG0280010974.01.T01:CDS
CTTGATTCGATATGATGGTA+TGG 0.531275 2:+77787875 MsG0280010974.01.T01:CDS
GAACAGAATGGAAAGTTCTC+CGG 0.541170 2:+77785433 MsG0280010974.01.T01:CDS
GGCACAGAGAGCAGCCGAGT+GGG 0.549650 2:+77785339 MsG0280010974.01.T01:CDS
GAAGGTGGGAAAAGTTATTG+TGG 0.550813 2:+77786074 MsG0280010974.01.T01:CDS
CAAGGATTCAGGCAACCCAT+TGG 0.554877 2:-77787856 None:intergenic
TCACCCATCAAGGATGATGA+TGG 0.556770 2:+77786152 MsG0280010974.01.T01:CDS
GTGGGAAAAGTTATTGTGGA+AGG 0.562063 2:+77786078 MsG0280010974.01.T01:CDS
GATGGTATGGTAATATTGGA+TGG 0.565406 2:+77787888 MsG0280010974.01.T01:CDS
TTACTGAATTACAAGAAGGA+TGG 0.565513 2:+77786101 MsG0280010974.01.T01:CDS
ATAAGGGAAGCATTAGAAGG+TGG 0.565911 2:+77786059 MsG0280010974.01.T01:CDS
GAGAAGAATTTACGTCCCAA+TGG 0.567462 2:+77787840 MsG0280010974.01.T01:CDS
CTGACGGCGGTGATCCACGC+GGG 0.572568 2:+77785500 MsG0280010974.01.T01:CDS
TCAGAACAGACGCTGAAACC+GGG 0.578722 2:+77785371 MsG0280010974.01.T01:CDS
TCCGGTGACGATGAACAGAA+TGG 0.582218 2:+77785421 MsG0280010974.01.T01:CDS
CGGGTTTCCGAGAGTTTCGG+AGG 0.590443 2:+77785519 MsG0280010974.01.T01:CDS
AGTGTTGGTGACTTCATCGC+TGG 0.594943 2:-77785278 None:intergenic
CTCGGCTGCTCTCTGTGCCG+CGG 0.596930 2:-77785335 None:intergenic
TTGCCATCATCATCCTTGAT+GGG 0.598307 2:-77786155 None:intergenic
TCATGGATGGCAATCAAGGA+AGG 0.600999 2:+77785301 MsG0280010974.01.T01:CDS
GAAGTTAACAAGCATACGGA+AGG 0.601063 2:+77787810 MsG0280010974.01.T01:CDS
GGTGGAAGTTAACAAGCATA+CGG 0.601427 2:+77787806 MsG0280010974.01.T01:CDS
ACCGCCGTCAGAAGAGTCAC+CGG 0.604229 2:-77785488 None:intergenic
GATTGCCATCCATGAAGTGT+TGG 0.607024 2:-77785293 None:intergenic
AAGGTTACTGAATTACAAGA+AGG 0.607960 2:+77786097 MsG0280010974.01.T01:CDS
AGATTAGGATCATTAGAATG+TGG 0.615243 2:+77781974 MsG0280010974.01.T01:CDS
AACCGGGAAACCACAAGGAG+TGG 0.616718 2:+77785387 MsG0280010974.01.T01:CDS
TGTTTGTTATGCTATCAATG+AGG 0.616780 2:-77781924 None:intergenic
GGAGTGGGAGTTAGAAACTC+CGG 0.618718 2:+77785403 MsG0280010974.01.T01:CDS
GGATACTAATCCGGAAGACG+TGG 0.618736 2:+77786031 MsG0280010974.01.T01:CDS
GGAAGGAGAAACCGGCGCCG+CGG 0.624207 2:+77785318 MsG0280010974.01.T01:CDS
AGTCACCAACACTTCATGGA+TGG 0.626274 2:+77785288 MsG0280010974.01.T01:CDS
ACCGGGAAACCACAAGGAGT+GGG 0.634059 2:+77785388 MsG0280010974.01.T01:CDS
ATAGTGAGAAGATTCCAGAA+TGG 0.635201 2:-77786128 None:intergenic
TCTGAGCACCAAACCCCACT+CGG 0.636849 2:-77785353 None:intergenic
TCCGGTGACTCTTCTGACGG+CGG 0.644875 2:+77785487 MsG0280010974.01.T01:CDS
GCACAGAGAGCAGCCGAGTG+GGG 0.647937 2:+77785340 MsG0280010974.01.T01:CDS
GTTTCCGGTGACTCTTCTGA+CGG 0.659575 2:+77785484 MsG0280010974.01.T01:CDS
CGGCACAGAGAGCAGCCGAG+TGG 0.661447 2:+77785338 MsG0280010974.01.T01:CDS
GCTGAAACCGGGAAACCACA+AGG 0.672498 2:+77785382 MsG0280010974.01.T01:CDS
TCTGACGGCGGTGATCCACG+CGG 0.687284 2:+77785499 MsG0280010974.01.T01:CDS
GAAACTCTCGGAAACCCGCG+TGG 0.692134 2:-77785514 None:intergenic
AAGTTAACAAGCATACGGAA+GGG 0.707389 2:+77787811 MsG0280010974.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAAATGATTAAAAAGT+TGG - Chr2:77783951-77783970 None:intergenic 10.0%
!! TATATTATATTTACTATACA+TGG - Chr2:77785959-77785978 None:intergenic 10.0%
!! TTACAATTACAATTAAATTA+AGG + Chr2:77786846-77786865 MsG0280010974.01.T01:intron 10.0%
!! TTATTAACTAACATTAATTT+CGG + Chr2:77787024-77787043 MsG0280010974.01.T01:intron 10.0%
!! TTTAGAAGAAAAAAAAAATT+AGG - Chr2:77782991-77783010 None:intergenic 10.0%
!!! TTGAATTAAGTATAATTTTT+AGG + Chr2:77786390-77786409 MsG0280010974.01.T01:intron 10.0%
!! AAAATGAAAAAAAATTGTGT+AGG - Chr2:77783624-77783643 None:intergenic 15.0%
!! AAGTATGATAAAATAATTAG+TGG - Chr2:77784457-77784476 None:intergenic 15.0%
!! ATTTATTATTATCTAAGAGT+TGG - Chr2:77784419-77784438 None:intergenic 15.0%
!! CAAAATTGACATTTAATTAA+TGG + Chr2:77787113-77787132 MsG0280010974.01.T01:intron 15.0%
!! GAGTATTTAACTAAAAATTA+TGG - Chr2:77787436-77787455 None:intergenic 15.0%
!! GTCATAGAAAATATTAAATA+AGG - Chr2:77782440-77782459 None:intergenic 15.0%
!! TAAAACAAAACAAATAAAAC+CGG - Chr2:77782161-77782180 None:intergenic 15.0%
!! TAAATAATGTAAAATCATGT+TGG - Chr2:77782104-77782123 None:intergenic 15.0%
!! TAATCACATGTAAAAAAATA+TGG + Chr2:77785832-77785851 MsG0280010974.01.T01:intron 15.0%
!! TAGATGAACAAATAATAATA+TGG - Chr2:77784611-77784630 None:intergenic 15.0%
!! TTAAAATAAATAGACTGAAT+TGG + Chr2:77782549-77782568 MsG0280010974.01.T01:intron 15.0%
!! TTTATTATTATCTAAGAGTT+GGG - Chr2:77784418-77784437 None:intergenic 15.0%
!!! AAAATTTTAGATATCAAGAA+TGG + Chr2:77786869-77786888 MsG0280010974.01.T01:intron 15.0%
!!! ACAATTTTTTTTCATTTTGT+TGG + Chr2:77783626-77783645 MsG0280010974.01.T01:intron 15.0%
!!! ATATAATTGTTTTTTGATTG+TGG + Chr2:77785974-77785993 MsG0280010974.01.T01:intron 15.0%
!!! CAAATACATAGTTTTAAATA+TGG - Chr2:77784177-77784196 None:intergenic 15.0%
!!! CATTAATTAAATGTCAATTT+TGG - Chr2:77787115-77787134 None:intergenic 15.0%
!!! TATAAGTTCTTTTGATATTA+TGG + Chr2:77787622-77787641 MsG0280010974.01.T01:intron 15.0%
!!! TATAATTGTTTTTTGATTGT+GGG + Chr2:77785975-77785994 MsG0280010974.01.T01:intron 15.0%
!!! TCTTTTTTATTGAAAAATGT+TGG + Chr2:77784635-77784654 MsG0280010974.01.T01:intron 15.0%
!!! TGTAACATAACTTAAATTTT+TGG + Chr2:77784959-77784978 MsG0280010974.01.T01:intron 15.0%
!!! TTAAAATTGTTGATAATTTG+TGG + Chr2:77783569-77783588 MsG0280010974.01.T01:intron 15.0%
!!! TTTAATTTACGGTAAAAATT+AGG - Chr2:77786735-77786754 None:intergenic 15.0%
!!! TTTTACGTGTTTATTTTTTT+TGG + Chr2:77784339-77784358 MsG0280010974.01.T01:intron 15.0%
!!! TTTTGCTCAAAAAAAAAAAA+AGG - Chr2:77785728-77785747 None:intergenic 15.0%
!!! TTTTTTTTTGAGAGAAAATA+TGG - Chr2:77784142-77784161 None:intergenic 15.0%
!! AAATATTAAGATAGAAAGTG+TGG + Chr2:77787173-77787192 MsG0280010974.01.T01:intron 20.0%
!! AATCTAAATCAGTGTAAAAA+AGG - Chr2:77783888-77783907 None:intergenic 20.0%
!! ATAAATAAGACTGAAATCTA+AGG - Chr2:77786937-77786956 None:intergenic 20.0%
!! ATAAATAAGCTATCTAATCT+TGG - Chr2:77782346-77782365 None:intergenic 20.0%
!! ATTAAATAAGGTTATGTTCA+TGG - Chr2:77782428-77782447 None:intergenic 20.0%
!! ATTCAACGATAATAGATTAT+GGG - Chr2:77784705-77784724 None:intergenic 20.0%
!! CTCTTAAATTAAATATCTTG+GGG + Chr2:77787087-77787106 MsG0280010974.01.T01:intron 20.0%
!! GCTCTTAAATTAAATATCTT+GGG + Chr2:77787086-77787105 MsG0280010974.01.T01:intron 20.0%
!! GGGTATTTAACTAAAAATTA+TGG - Chr2:77787532-77787551 None:intergenic 20.0%
!! GTATTAGTATTAAGTTAAGT+AGG + Chr2:77783598-77783617 MsG0280010974.01.T01:intron 20.0%
!! TAAATAAGACTGAAATCTAA+GGG - Chr2:77786936-77786955 None:intergenic 20.0%
!! TAGTTAATAAAATCTTAGTC+TGG - Chr2:77787014-77787033 None:intergenic 20.0%
!! TATCATTATCTTTACTTTAC+CGG + Chr2:77782139-77782158 MsG0280010974.01.T01:intron 20.0%
!! TCTTAAATTAAATATCTTGG+GGG + Chr2:77787088-77787107 MsG0280010974.01.T01:intron 20.0%
!! TGCTCTTAAATTAAATATCT+TGG + Chr2:77787085-77787104 MsG0280010974.01.T01:intron 20.0%
!! TTGATACACAAACAAATTTA+AGG + Chr2:77783297-77783316 MsG0280010974.01.T01:intron 20.0%
!! TTGTTCTTTCTAATATTCTA+GGG + Chr2:77782204-77782223 MsG0280010974.01.T01:intron 20.0%
!! TTTGTTCTTTCTAATATTCT+AGG + Chr2:77782203-77782222 MsG0280010974.01.T01:intron 20.0%
!!! AAAAAGACTTTTAAAAAAGG+AGG - Chr2:77787658-77787677 None:intergenic 20.0%
!!! AAACTTTAAGAAATATCAAC+AGG - Chr2:77782594-77782613 None:intergenic 20.0%
!!! AAATTGTAGTTTTCAAAGTT+AGG + Chr2:77786660-77786679 MsG0280010974.01.T01:intron 20.0%
!!! AAATTGTAGTTTTCATACTT+AGG - Chr2:77786467-77786486 None:intergenic 20.0%
!!! AACTTTAAGAAATATCAACA+GGG - Chr2:77782593-77782612 None:intergenic 20.0%
!!! AACTTTGAAAACTACAATTT+TGG - Chr2:77786660-77786679 None:intergenic 20.0%
!!! AAGTATGAAAACTACAATTT+TGG + Chr2:77786467-77786486 MsG0280010974.01.T01:intron 20.0%
!!! AATATTAAGATAGAAAGTGT+GGG + Chr2:77787174-77787193 MsG0280010974.01.T01:intron 20.0%
!!! AATATTTTCTATGACTATCT+CGG + Chr2:77782445-77782464 MsG0280010974.01.T01:intron 20.0%
!!! AATGTACTGTTTTCTATTTA+TGG - Chr2:77784370-77784389 None:intergenic 20.0%
!!! AATTGTAGTTTTCAAAGTTA+GGG + Chr2:77786661-77786680 MsG0280010974.01.T01:intron 20.0%
!!! AATTGTAGTTTTCATACTTA+GGG - Chr2:77786466-77786485 None:intergenic 20.0%
!!! GATTTTTTTTGACAAAACTT+AGG + Chr2:77782821-77782840 MsG0280010974.01.T01:intron 20.0%
!!! GCAAAAAAGACTTTTAAAAA+AGG - Chr2:77787661-77787680 None:intergenic 20.0%
!!! TAGACGGTTAATTTAATTTA+CGG - Chr2:77786746-77786765 None:intergenic 20.0%
!!! TTGGTTTGTAAAAGTTAATA+AGG - Chr2:77782085-77782104 None:intergenic 20.0%
! AAAAGGAATTCTAATAACTC+TGG + Chr2:77785457-77785476 MsG0280010974.01.T01:CDS 25.0%
! AAGGTAGTTACTAGTTAAAA+TGG + Chr2:77785079-77785098 MsG0280010974.01.T01:intron 25.0%
! AAGTCGTGTATCTATATAAT+TGG - Chr2:77783794-77783813 None:intergenic 25.0%
! AATTTATGTTCCTTATCAAC+TGG - Chr2:77784538-77784557 None:intergenic 25.0%
! ACAATAATAACTACAGAGTA+TGG + Chr2:77781944-77781963 MsG0280010974.01.T01:CDS 25.0%
! AGAATGCTTCTTACTATTAT+AGG - Chr2:77784289-77784308 None:intergenic 25.0%
! AGTCGTGTATCTATATAATT+GGG - Chr2:77783793-77783812 None:intergenic 25.0%
! ATATGATGGTATGGTAATAT+TGG + Chr2:77787884-77787903 MsG0280010974.01.T01:CDS 25.0%
! ATGAAACTCATATAAAGATG+TGG - Chr2:77783215-77783234 None:intergenic 25.0%
! ATTATATAGATACACGACTT+TGG + Chr2:77783794-77783813 MsG0280010974.01.T01:intron 25.0%
! ATTGAAGTTTGAACTTTGAA+AGG + Chr2:77783708-77783727 MsG0280010974.01.T01:intron 25.0%
! ATTTATGTTCCTTATCAACT+GGG - Chr2:77784537-77784556 None:intergenic 25.0%
! ATTTGTTCCATAAGTTAAGT+AGG - Chr2:77785768-77785787 None:intergenic 25.0%
! GATTAATTTAGTTGAGTAGA+CGG - Chr2:77786762-77786781 None:intergenic 25.0%
! GATTCAACGATAATAGATTA+TGG - Chr2:77784706-77784725 None:intergenic 25.0%
! TAATCGCAATGAAATTGAAA+TGG - Chr2:77787922-77787941 None:intergenic 25.0%
! TATGCATGTAATGTAAGATA+GGG - Chr2:77787457-77787476 None:intergenic 25.0%
! TCATGCATTTGAGAAAATTA+TGG + Chr2:77782922-77782941 MsG0280010974.01.T01:intron 25.0%
! TGAATGTTGATATTTCAGTA+AGG + Chr2:77783431-77783450 MsG0280010974.01.T01:intron 25.0%
! TGCAAAATATCAATCTATGT+TGG + Chr2:77782261-77782280 MsG0280010974.01.T01:intron 25.0%
! TGTTCTTTCTAATATTCTAG+GGG + Chr2:77782205-77782224 MsG0280010974.01.T01:intron 25.0%
! TTACTTTATCAACACAGAAT+AGG + Chr2:77782666-77782685 MsG0280010974.01.T01:intron 25.0%
! TTATACTTCAAAAGAGTCAT+AGG + Chr2:77785651-77785670 MsG0280010974.01.T01:intron 25.0%
! TTCAACTATTTGATTAACCA+TGG - Chr2:77786375-77786394 None:intergenic 25.0%
! TTCCACAATGCAATATATAT+AGG - Chr2:77785044-77785063 None:intergenic 25.0%
! TTCCTATATATATTGCATTG+TGG + Chr2:77785039-77785058 MsG0280010974.01.T01:intron 25.0%
! TTTGTTTGTGTATCAAGTAT+TGG - Chr2:77783293-77783312 None:intergenic 25.0%
!! AAGTGTATAATTTTCCTGTA+AGG - Chr2:77783540-77783559 None:intergenic 25.0%
!! AATCAGTGTAAAAAAGGTTT+TGG - Chr2:77783882-77783901 None:intergenic 25.0%
!! AGATTGATATTTTGCAACTT+TGG - Chr2:77782257-77782276 None:intergenic 25.0%
!! ATATTAAGATAGAAAGTGTG+GGG + Chr2:77787175-77787194 MsG0280010974.01.T01:intron 25.0%
!! ATATTTTCTATGACTATCTC+GGG + Chr2:77782446-77782465 MsG0280010974.01.T01:intron 25.0%
!! ATCAGTGTAAAAAAGGTTTT+GGG - Chr2:77783881-77783900 None:intergenic 25.0%
!! ATTCTGTGTTGATAAAGTAA+GGG - Chr2:77782666-77782685 None:intergenic 25.0%
!! ATTGTAGTTTTCAAAGTTAG+GGG + Chr2:77786662-77786681 MsG0280010974.01.T01:intron 25.0%
!! ATTGTAGTTTTCATACTTAG+GGG - Chr2:77786465-77786484 None:intergenic 25.0%
!! TATTCTGTGTTGATAAAGTA+AGG - Chr2:77782667-77782686 None:intergenic 25.0%
!! TTTAATCGATATGGTTTTCA+TGG + Chr2:77782032-77782051 MsG0280010974.01.T01:CDS 25.0%
!! TTTTCAAAATGTTGCGATTA+TGG + Chr2:77786561-77786580 MsG0280010974.01.T01:intron 25.0%
!! TTTTGATATTATGGACCAAA+TGG + Chr2:77787631-77787650 MsG0280010974.01.T01:intron 25.0%
!!! AAGAACTGTGTTTTGTTTAT+AGG + Chr2:77782799-77782818 MsG0280010974.01.T01:intron 25.0%
!!! ATCAATGTTCTAGAACTAAA+TGG - Chr2:77782692-77782711 None:intergenic 25.0%
!!! CAACATTTTGAAAAGATAAG+GGG - Chr2:77786555-77786574 None:intergenic 25.0%
!!! GCAACATTTTGAAAAGATAA+GGG - Chr2:77786556-77786575 None:intergenic 25.0%
AAAACCATCTCAAAAATGTG+AGG + Chr2:77784491-77784510 MsG0280010974.01.T01:intron 30.0%
AAGATTCTAACCTTTGAATG+TGG + Chr2:77787700-77787719 MsG0280010974.01.T01:intron 30.0%
AAGGTTACTGAATTACAAGA+AGG + Chr2:77786097-77786116 MsG0280010974.01.T01:CDS 30.0%
ACATATTTCCCTTATGTTAG+GGG - Chr2:77786525-77786544 None:intergenic 30.0%
ACGTGTCCAAAAAAAGATAA+GGG - Chr2:77786604-77786623 None:intergenic 30.0%
ACGTTAAAATTTGTGAACCA+TGG + Chr2:77786355-77786374 MsG0280010974.01.T01:intron 30.0%
AGACAATCCCTTGATATTAT+AGG - Chr2:77783155-77783174 None:intergenic 30.0%
AGACATATTTCCCTTATGTT+AGG - Chr2:77786527-77786546 None:intergenic 30.0%
AGATTAGGATCATTAGAATG+TGG + Chr2:77781974-77781993 MsG0280010974.01.T01:CDS 30.0%
ATAAGGGGGTTAAAAGATAA+GGG - Chr2:77786588-77786607 None:intergenic 30.0%
ATATTGCATTGTGGAAACTA+CGG + Chr2:77785048-77785067 MsG0280010974.01.T01:intron 30.0%
ATCAAGTGTGTGTTGAAAAA+TGG - Chr2:77785805-77785824 None:intergenic 30.0%
ATGAGATGCCTATAATATCA+AGG + Chr2:77783144-77783163 MsG0280010974.01.T01:intron 30.0%
CAAACTTCAATGATGATTTG+TGG - Chr2:77783699-77783718 None:intergenic 30.0%
CTATGCATGTAATGTAAGAT+AGG - Chr2:77787458-77787477 None:intergenic 30.0%
CTCACATATATATGATCAAC+TGG + Chr2:77783090-77783109 MsG0280010974.01.T01:intron 30.0%
GAAATATGAACCATGTGATT+TGG - Chr2:77784728-77784747 None:intergenic 30.0%
GAATCTGTAGTCAAACAATT+TGG - Chr2:77782622-77782641 None:intergenic 30.0%
GACATATTTCCCTTATGTTA+GGG - Chr2:77786526-77786545 None:intergenic 30.0%
GGGTTACTGAAATAAATTGA+CGG - Chr2:77784517-77784536 None:intergenic 30.0%
GTAAAGAAGATATCAATGAG+AGG + Chr2:77787592-77787611 MsG0280010974.01.T01:intron 30.0%
GTGTAGGTTGTTTAATACAT+TGG - Chr2:77784996-77785015 None:intergenic 30.0%
TAATAAAATCTTAGTCTGGC+CGG - Chr2:77787010-77787029 None:intergenic 30.0%
TAATAATATGGAGTTGTGTG+TGG - Chr2:77784599-77784618 None:intergenic 30.0%
TCAAGTGTGTGTTGAAAAAT+GGG - Chr2:77785804-77785823 None:intergenic 30.0%
TGACACAAAACAAACATGAA+TGG - Chr2:77784246-77784265 None:intergenic 30.0%
TGAGATGCCTATAATATCAA+GGG + Chr2:77783145-77783164 MsG0280010974.01.T01:intron 30.0%
TTACTGAATTACAAGAAGGA+TGG + Chr2:77786101-77786120 MsG0280010974.01.T01:CDS 30.0%
TTATAGGAAAGTGAAAGTGA+AGG - Chr2:77784273-77784292 None:intergenic 30.0%
TTCAACACACACTTGATATA+TGG + Chr2:77785808-77785827 MsG0280010974.01.T01:intron 30.0%
TTCCTATTGGACTATTAATG+TGG - Chr2:77783491-77783510 None:intergenic 30.0%
TTTAAAAAAGGAGGTCCATT+TGG - Chr2:77787649-77787668 None:intergenic 30.0%
! AATTTACAAAGTGCCAAAGA+CGG + Chr2:77787278-77787297 MsG0280010974.01.T01:intron 30.0%
! AATTTTCCTGTAAGGAAGAT+TGG - Chr2:77783532-77783551 None:intergenic 30.0%
! ACTTTGGAGACTAATGATAA+GGG + Chr2:77783810-77783829 MsG0280010974.01.T01:intron 30.0%
! AGAGCATATTTTCCTAAACA+TGG - Chr2:77786496-77786515 None:intergenic 30.0%
! AGCATATTTTCCTAAACATG+GGG - Chr2:77786494-77786513 None:intergenic 30.0%
! AGTTTGAACTTTGAAAGGTA+AGG + Chr2:77783713-77783732 MsG0280010974.01.T01:intron 30.0%
! ATATCAATCTATGTTGGTTG+AGG + Chr2:77782267-77782286 MsG0280010974.01.T01:intron 30.0%
! ATCAAGAGTCTTATGTTTGA+TGG - Chr2:77783268-77783287 None:intergenic 30.0%
! ATGGATGAAAAAGTATGCAT+CGG + Chr2:77782051-77782070 MsG0280010974.01.T01:CDS 30.0%
! CCATATCGATTAAATCAACT+TGG - Chr2:77782026-77782045 None:intergenic 30.0%
! CTCATCAGTTTTCAAAGTTA+GGG + Chr2:77786632-77786651 MsG0280010974.01.T01:intron 30.0%
! CTTCTTTTCATTACACATCT+AGG - Chr2:77787727-77787746 None:intergenic 30.0%
! CTTTACTTTCCCTCATATTT+TGG - Chr2:77787483-77787502 None:intergenic 30.0%
! CTTTCAAAAAGTTGCGATTT+TGG - Chr2:77786457-77786438 None:intergenic 30.0%
! GAGCATATTTTCCTAAACAT+GGG - Chr2:77786495-77786514 None:intergenic 30.0%
! GTTATTAGAATTCCTTTTGC+CGG - Chr2:77785455-77785474 None:intergenic 30.0%
! TCATCAGTTTTCAAAGTTAG+GGG + Chr2:77786633-77786652 MsG0280010974.01.T01:intron 30.0%
! TCTCATCAGTTTTCAAAGTT+AGG + Chr2:77786631-77786650 MsG0280010974.01.T01:intron 30.0%
! TGTTATGATTTTGTTCGTGT+AGG - Chr2:77785012-77785031 None:intergenic 30.0%
! TTGTAGTTTTCAAAGTTAGG+GGG + Chr2:77786663-77786682 MsG0280010974.01.T01:intron 30.0%
! TTGTAGTTTTCATACTTAGG+GGG - Chr2:77786464-77786483 None:intergenic 30.0%
! TTTTAGATCTACTAGTGTAG+TGG - Chr2:77782483-77782502 None:intergenic 30.0%
!! AACTTTTTGAAAGTTAAGGG+GGG - Chr2:77786431-77786450 None:intergenic 30.0%
!! ATCGCAACTTTTTGAAAGAT+AGG + Chr2:77786691-77786710 MsG0280010974.01.T01:intron 30.0%
!! CAACTTTTTGAAAGTTAAGG+GGG - Chr2:77786432-77786451 None:intergenic 30.0%
!! CCAAGTTGATTTAATCGATA+TGG + Chr2:77782023-77782042 MsG0280010974.01.T01:CDS 30.0%
!! CGCAACATTTTGAAAAGATA+AGG - Chr2:77786557-77786576 None:intergenic 30.0%
!! CGCAACTTTTTGAAAGTTAA+GGG - Chr2:77786434-77786453 None:intergenic 30.0%
!! GCAACTTTTTGAAAGTTAAG+GGG - Chr2:77786433-77786452 None:intergenic 30.0%
!! TCAAGAATGGATTTTCTTGA+TGG + Chr2:77786882-77786901 MsG0280010974.01.T01:intron 30.0%
!! TCGCAACTTTTTGAAAGATA+GGG + Chr2:77786692-77786711 MsG0280010974.01.T01:intron 30.0%
!! TCGCAACTTTTTGAAAGTTA+AGG - Chr2:77786435-77786454 None:intergenic 30.0%
!! TGGTCTCTATCTTTAAAGTT+TGG - Chr2:77782006-77782025 None:intergenic 30.0%
!! TGTTTGTTATGCTATCAATG+AGG - Chr2:77781927-77781946 None:intergenic 30.0%
!!! ATTGTTTTTTGATTGTGGGT+TGG + Chr2:77785979-77785998 MsG0280010974.01.T01:intron 30.0%
!!! TTAACCCCCTTATCTTTTTT+TGG + Chr2:77786595-77786614 MsG0280010974.01.T01:intron 30.0%
!!! TTGGTTTTTCTAGCTAGAAA+TGG - Chr2:77783932-77783951 None:intergenic 30.0%
!!! TTGTTTTTTGATTGTGGGTT+GGG + Chr2:77785980-77785999 MsG0280010974.01.T01:intron 30.0%
AAAGAGTCATAGGAAGAAAC+TGG + Chr2:77785661-77785680 MsG0280010974.01.T01:intron 35.0%
AAGTTAACAAGCATACGGAA+GGG + Chr2:77787811-77787830 MsG0280010974.01.T01:CDS 35.0%
AATATGGAATGGAAGTGAGT+TGG - Chr2:77783664-77783683 None:intergenic 35.0%
ACTTGTGCATTTGCTTTCAT+TGG - Chr2:77783063-77783082 None:intergenic 35.0%
AGAAATGGCAAGAGAAAAAG+TGG - Chr2:77783917-77783936 None:intergenic 35.0%
AGAAGAATTTACGTCCCAAT+GGG + Chr2:77787841-77787860 MsG0280010974.01.T01:CDS 35.0%
AGGAAAACAGTAGGTATGAA+GGG - Chr2:77784043-77784062 None:intergenic 35.0%
ATAGTGAGAAGATTCCAGAA+TGG - Chr2:77786131-77786150 None:intergenic 35.0%
ATATATACAGTGTGTCAGTG+TGG - Chr2:77787247-77787266 None:intergenic 35.0%
ATCGTTGAATCCAAATCACA+TGG + Chr2:77784715-77784734 MsG0280010974.01.T01:intron 35.0%
ATGCATAGTGCCAAAATATG+AGG + Chr2:77787470-77787489 MsG0280010974.01.T01:intron 35.0%
ATGCATTTCTCACTGTGATA+AGG + Chr2:77787220-77787239 MsG0280010974.01.T01:intron 35.0%
CAAGTGTGTGTTGAAAAATG+GGG - Chr2:77785803-77785822 None:intergenic 35.0%
CACGTGTCCAAAAAAAGATA+AGG - Chr2:77786605-77786624 None:intergenic 35.0%
CATACCATCATATCGAATCA+AGG - Chr2:77787877-77787896 None:intergenic 35.0%
CATATTTCCCTTATGTTAGG+GGG - Chr2:77786524-77786543 None:intergenic 35.0%
CCATAAGTTAAGTAGGTACT+AGG - Chr2:77785761-77785780 None:intergenic 35.0%
CCTAGTACCTACTTAACTTA+TGG + Chr2:77785758-77785777 MsG0280010974.01.T01:intron 35.0%
CGTGTCCAAAAAAAGATAAG+GGG - Chr2:77786603-77786622 None:intergenic 35.0%
GAGTAAGATTCAATGTACTG+TGG + Chr2:77782227-77782246 MsG0280010974.01.T01:intron 35.0%
GAGTATGGAGATTCAAGATT+AGG + Chr2:77781959-77781978 MsG0280010974.01.T01:CDS 35.0%
GATAAGGGGGTTAAAAGATA+AGG - Chr2:77786589-77786608 None:intergenic 35.0%
GATGGTATGGTAATATTGGA+TGG + Chr2:77787888-77787907 MsG0280010974.01.T01:CDS 35.0%
GCAATGTGCTCAAGTTAATT+GGG + Chr2:77786174-77786193 MsG0280010974.01.T01:CDS 35.0%
GCTATCAATGAGGTCAAATT+TGG - Chr2:77781917-77781936 None:intergenic 35.0%
GGCTAATTCATTTGAGTGTA+TGG + Chr2:77786320-77786339 MsG0280010974.01.T01:intron 35.0%
GTCACAACATCTATTGTTGT+TGG - Chr2:77784822-77784841 None:intergenic 35.0%
GTGTCCAAAAAAAGATAAGG+GGG - Chr2:77786602-77786621 None:intergenic 35.0%
GTTGTTTAATACATTGGACC+AGG - Chr2:77784990-77785009 None:intergenic 35.0%
TAAGGGGGTTAAAAGATAAG+GGG - Chr2:77786587-77786606 None:intergenic 35.0%
TAGATTATGGGATATCCATG+AGG - Chr2:77784693-77784712 None:intergenic 35.0%
TATGTTCATGGACACATACA+TGG - Chr2:77782416-77782435 None:intergenic 35.0%
TCAACAAACTTTCGTGGTTT+CGG + Chr2:77785567-77785586 MsG0280010974.01.T01:CDS 35.0%
TCATATCGAATCAAGGATTC+AGG - Chr2:77787870-77787889 None:intergenic 35.0%
TGAAATTCAGCTGATGTGAT+CGG - Chr2:77784902-77784921 None:intergenic 35.0%
TGAATGCGGTAAAATGTTGA+TGG + Chr2:77784846-77784865 MsG0280010974.01.T01:intron 35.0%
TGCATACATAATCGGGTAAT+CGG - Chr2:77785605-77785624 None:intergenic 35.0%
TGCATAGTGCCAAAATATGA+GGG + Chr2:77787471-77787490 MsG0280010974.01.T01:intron 35.0%
TGCCACAAAACATTCACATT+GGG - Chr2:77787779-77787798 None:intergenic 35.0%
TGCCACATTAATAGTCCAAT+AGG + Chr2:77783486-77783505 MsG0280010974.01.T01:intron 35.0%
TGGACACAATTAATCACATG+TGG + Chr2:77786299-77786318 MsG0280010974.01.T01:intron 35.0%
TGTTGGATTGAATACTTCGA+GGG - Chr2:77785170-77785189 None:intergenic 35.0%
TTATCTAAGAGTTGGGACAT+TGG - Chr2:77784411-77784430 None:intergenic 35.0%
TTGTTGGATTGAATACTTCG+AGG - Chr2:77785171-77785190 None:intergenic 35.0%
TTTAATACATTGGACCAGGT+TGG - Chr2:77784986-77785005 None:intergenic 35.0%
! AATGATGATTTGTGGTGTCA+GGG - Chr2:77783691-77783710 None:intergenic 35.0%
! AATGTTTTGTGGCAGAATGT+TGG + Chr2:77787785-77787804 MsG0280010974.01.T01:intron 35.0%
! ACTTTGAAAGGTAAGGTGTT+AGG + Chr2:77783720-77783739 MsG0280010974.01.T01:intron 35.0%
! ATTTTGAACCATAGACCTCA+TGG + Chr2:77784675-77784694 MsG0280010974.01.T01:intron 35.0%
! CTTGATTCGATATGATGGTA+TGG + Chr2:77787875-77787894 MsG0280010974.01.T01:CDS 35.0%
! CTTTTAACCCCCTAACATAA+GGG + Chr2:77786514-77786533 MsG0280010974.01.T01:intron 35.0%
! GAATCCTTGATTCGATATGA+TGG + Chr2:77787870-77787889 MsG0280010974.01.T01:CDS 35.0%
! GACTTTGGAGACTAATGATA+AGG + Chr2:77783809-77783828 MsG0280010974.01.T01:intron 35.0%
! GAGATTTGACGTTTTCCTAT+TGG - Chr2:77783504-77783523 None:intergenic 35.0%
! GCATATTTTCCTAAACATGG+GGG - Chr2:77786493-77786512 None:intergenic 35.0%
! TACCCAATGTGAATGTTTTG+TGG + Chr2:77787774-77787793 MsG0280010974.01.T01:intron 35.0%
! TCTTTTAACCCCCTAACATA+AGG + Chr2:77786513-77786532 MsG0280010974.01.T01:intron 35.0%
! TGATATATACTTGCTGGATC+AGG - Chr2:77784063-77784082 None:intergenic 35.0%
! TGCTTTTCAACAAACTTTCG+TGG + Chr2:77785561-77785580 MsG0280010974.01.T01:CDS 35.0%
! TTGTGCTGATATATACTTGC+TGG - Chr2:77784069-77784088 None:intergenic 35.0%
! TTTCAGTAACCCAGTTGATA+AGG + Chr2:77784525-77784544 MsG0280010974.01.T01:intron 35.0%
! TTTTTCTATACCCGCAACAT+TGG - Chr2:77786806-77786825 None:intergenic 35.0%
!! AAGATAAGGGAAGCATTAGA+AGG + Chr2:77786056-77786075 MsG0280010974.01.T01:CDS 35.0%
!! CGCAACTTTTTGAAAGATAG+GGG + Chr2:77786693-77786712 MsG0280010974.01.T01:intron 35.0%
!! GCAACTTTTTGAAAGATAGG+GGG + Chr2:77786694-77786713 MsG0280010974.01.T01:intron 35.0%
!! TGATGGATTCAAGAATGACA+TGG + Chr2:77786899-77786918 MsG0280010974.01.T01:intron 35.0%
!!! CTTAAATTTTTGGTCCAACC+TGG + Chr2:77784969-77784988 MsG0280010974.01.T01:intron 35.0%
AAAAGCAAGAGTCACAAGTG+TGG - Chr2:77787371-77787390 None:intergenic 40.0%
AACAAGCAACTCAACTTCAC+CGG + Chr2:77785186-77785205 MsG0280010974.01.T01:intron 40.0%
AATAACTCTGGCAGAGTTTC+CGG + Chr2:77785469-77785488 MsG0280010974.01.T01:CDS 40.0%
AATGCATGCATCTTTCTCTC+TGG - Chr2:77787207-77787226 None:intergenic 40.0%
ACATCTAGGTCCACATTCAA+AGG - Chr2:77787713-77787732 None:intergenic 40.0%
ATATCAACAGGGCTTGAAGA+AGG - Chr2:77782582-77782601 None:intergenic 40.0%
ATATCAAGGGATTGTCTCAG+TGG + Chr2:77783158-77783177 MsG0280010974.01.T01:intron 40.0%
ATGAAGTCACCAACACTTCA+TGG + Chr2:77785284-77785303 MsG0280010974.01.T01:CDS 40.0%
ATTGCCATCATCATCCTTGA+TGG - Chr2:77786159-77786178 None:intergenic 40.0%
CACAAAGACCATCATTTCCA+AGG + Chr2:77785132-77785151 MsG0280010974.01.T01:intron 40.0%
CAGGAAAACAGTAGGTATGA+AGG - Chr2:77784044-77784063 None:intergenic 40.0%
CAGTTAAACATAGCCGTCTT+TGG - Chr2:77787294-77787313 None:intergenic 40.0%
CATCTCATCGTGTTCTAGTA+AGG - Chr2:77783132-77783151 None:intergenic 40.0%
CCATTTCCAATCTTCCTTAC+AGG + Chr2:77783523-77783542 MsG0280010974.01.T01:intron 40.0%
CCTGAAAACATGGACAGAAA+CGG + Chr2:77785231-77785250 MsG0280010974.01.T01:intron 40.0%
CCTGCACTTGCATACATAAT+CGG - Chr2:77785613-77785632 None:intergenic 40.0%
CCTGTAAGGAAGATTGGAAA+TGG - Chr2:77783526-77783545 None:intergenic 40.0%
CTAAAAGGAGTGGAAGTAAG+TGG - Chr2:77783459-77783478 None:intergenic 40.0%
CTGCACTTGCATACATAATC+GGG - Chr2:77785612-77785631 None:intergenic 40.0%
CTGCCACAAAACATTCACAT+TGG - Chr2:77787780-77787799 None:intergenic 40.0%
GAACAGAATGGAAAGTTCTC+CGG + Chr2:77785433-77785452 MsG0280010974.01.T01:CDS 40.0%
GAAGGTGGGAAAAGTTATTG+TGG + Chr2:77786074-77786093 MsG0280010974.01.T01:CDS 40.0%
GAAGTTAACAAGCATACGGA+AGG + Chr2:77787810-77787829 MsG0280010974.01.T01:CDS 40.0%
GAGAAGAATTTACGTCCCAA+TGG + Chr2:77787840-77787859 MsG0280010974.01.T01:CDS 40.0%
GCATACATAATCGGGTAATC+GGG - Chr2:77785604-77785623 None:intergenic 40.0%
GGCAATGTGCTCAAGTTAAT+TGG + Chr2:77786173-77786192 MsG0280010974.01.T01:CDS 40.0%
GGTCTTTGTGATGAAGATGA+TGG - Chr2:77785122-77785141 None:intergenic 40.0%
GGTGGAAGTTAACAAGCATA+CGG + Chr2:77787806-77787825 MsG0280010974.01.T01:CDS 40.0%
GTGGGAAAAGTTATTGTGGA+AGG + Chr2:77786078-77786097 MsG0280010974.01.T01:CDS 40.0%
TATCAGCACAACTCAGCTTA+AGG + Chr2:77784078-77784097 MsG0280010974.01.T01:intron 40.0%
TCTCACTATTTCACCCATCA+AGG + Chr2:77786142-77786161 MsG0280010974.01.T01:CDS 40.0%
TGATTAACCAGATATCACGC+AGG + Chr2:77785916-77785935 MsG0280010974.01.T01:intron 40.0%
TGCAGGTTTCTTCAACATGA+CGG + Chr2:77785627-77785646 MsG0280010974.01.T01:intron 40.0%
TGCGTGATATCTGGTTAATC+AGG - Chr2:77785917-77785936 None:intergenic 40.0%
TGGACATGCATTCATGACAT+TGG - Chr2:77787416-77787435 None:intergenic 40.0%
TGTGTGTTGAAAAATGGGGT+AGG - Chr2:77785799-77785818 None:intergenic 40.0%
TTAAACACCTGCGTGATATC+TGG - Chr2:77785926-77785945 None:intergenic 40.0%
TTCAAATCCTCCGAAACTCT+CGG - Chr2:77785529-77785548 None:intergenic 40.0%
TTGCCATCATCATCCTTGAT+GGG - Chr2:77786158-77786177 None:intergenic 40.0%
! AAACCATACAAAAGCACGCA+AGG + Chr2:77782958-77782977 MsG0280010974.01.T01:intron 40.0%
! AACATTTTACCGCATTCACG+CGG - Chr2:77784844-77784863 None:intergenic 40.0%
! ACACTTGTGACTCTTGCTTT+TGG + Chr2:77787370-77787389 MsG0280010974.01.T01:intron 40.0%
! ACGTGATTAGTCCAATGTTG+CGG + Chr2:77786792-77786811 MsG0280010974.01.T01:intron 40.0%
! ATTCCTTGCGTGCTTTTGTA+TGG - Chr2:77782964-77782983 None:intergenic 40.0%
! ATTTTGAGCATCTGTGCAAG+TGG + Chr2:77783181-77783200 MsG0280010974.01.T01:intron 40.0%
! CAATGATGATTTGTGGTGTC+AGG - Chr2:77783692-77783711 None:intergenic 40.0%
! GAAAGGTAAGGTGTTAGGTT+AGG + Chr2:77783725-77783744 MsG0280010974.01.T01:intron 40.0%
!! ATAAGGGAAGCATTAGAAGG+TGG + Chr2:77786059-77786078 MsG0280010974.01.T01:CDS 40.0%
!! TAAGGGAAGCATTAGAAGGT+GGG + Chr2:77786060-77786079 MsG0280010974.01.T01:CDS 40.0%
!!! TTTTTGATTGTGGGTTGGGT+GGG + Chr2:77785984-77786003 MsG0280010974.01.T01:intron 40.0%
!!! TTTTTTGATTGTGGGTTGGG+TGG + Chr2:77785983-77786002 MsG0280010974.01.T01:intron 40.0%
AAGGATTCAGGCAACCCATT+GGG - Chr2:77787858-77787877 None:intergenic 45.0%
ACAAGGTGCGGATACTAATC+CGG + Chr2:77786022-77786041 MsG0280010974.01.T01:CDS 45.0%
AGAAGGATGGAACTCCATTC+TGG + Chr2:77786114-77786133 MsG0280010974.01.T01:CDS 45.0%
AGTCACCAACACTTCATGGA+TGG + Chr2:77785288-77785307 MsG0280010974.01.T01:CDS 45.0%
ATCATTTCCAAGGATCCTCG+AGG + Chr2:77785142-77785161 MsG0280010974.01.T01:intron 45.0%
ATCCATCACCCCATGATTTC+CGG + Chr2:77786988-77787007 MsG0280010974.01.T01:intron 45.0%
ATGGAAAGTTCTCCGGCAAA+AGG + Chr2:77785440-77785459 MsG0280010974.01.T01:CDS 45.0%
ATGTGGCAGCTAGTGCTAAA+AGG - Chr2:77783474-77783493 None:intergenic 45.0%
ATTCAGCTGATGTGATCGGA+AGG - Chr2:77784898-77784917 None:intergenic 45.0%
CACACTCACACCTGAAAACA+TGG + Chr2:77785221-77785240 MsG0280010974.01.T01:intron 45.0%
CACTTCATGGATGGCAATCA+AGG + Chr2:77785297-77785316 MsG0280010974.01.T01:CDS 45.0%
CATAATCGGGTAATCGGGTT+TGG - Chr2:77785599-77785618 None:intergenic 45.0%
CATGTGAATAACAGCGCACA+AGG + Chr2:77783848-77783867 MsG0280010974.01.T01:intron 45.0%
CCGATTATGTATGCAAGTGC+AGG + Chr2:77785610-77785629 MsG0280010974.01.T01:intron 45.0%
CTTATCTTTGCCACGTCTTC+CGG - Chr2:77786044-77786063 None:intergenic 45.0%
CTTGTGCGCTGTTATTCACA+TGG - Chr2:77783850-77783869 None:intergenic 45.0%
GAATAACAGCGCACAAGGAT+GGG + Chr2:77783853-77783872 MsG0280010974.01.T01:intron 45.0%
GATTGCCATCCATGAAGTGT+TGG - Chr2:77785296-77785315 None:intergenic 45.0%
GCAATCAAGGAAGGAGAAAC+CGG + Chr2:77785310-77785329 MsG0280010974.01.T01:CDS 45.0%
GCAGGTTTCTTCAACATGAC+GGG + Chr2:77785628-77785647 MsG0280010974.01.T01:intron 45.0%
GCGACACAATTAATCACACG+TGG + Chr2:77786279-77786298 MsG0280010974.01.T01:intron 45.0%
GGAAGACGTGGCAAAGATAA+GGG + Chr2:77786043-77786062 MsG0280010974.01.T01:CDS 45.0%
GTCAGGGAGAGAATATGGAA+TGG - Chr2:77783675-77783694 None:intergenic 45.0%
TCACCCATCAAGGATGATGA+TGG + Chr2:77786152-77786171 MsG0280010974.01.T01:CDS 45.0%
TCATGGATGGCAATCAAGGA+AGG + Chr2:77785301-77785320 MsG0280010974.01.T01:CDS 45.0%
TCCATTCTGTTCATCGTCAC+CGG - Chr2:77785425-77785444 None:intergenic 45.0%
TCGAGGATCCTTGGAAATGA+TGG - Chr2:77785143-77785162 None:intergenic 45.0%
TCTAAGAGTTGGGACATTGG+AGG - Chr2:77784408-77784427 None:intergenic 45.0%
TGAATAACAGCGCACAAGGA+TGG + Chr2:77783852-77783871 MsG0280010974.01.T01:intron 45.0%
TGCTGGATCAGGAAAACAGT+AGG - Chr2:77784052-77784071 None:intergenic 45.0%
TGGGATATCCATGAGGTCTA+TGG - Chr2:77784686-77784705 None:intergenic 45.0%
TTAGTCTGGCCGGAAATCAT+GGG - Chr2:77787000-77787019 None:intergenic 45.0%
TTGTGGAAACTACGGTCTAC+AGG + Chr2:77785056-77785075 MsG0280010974.01.T01:intron 45.0%
TTTCTAACTCCCACTCCTTG+TGG - Chr2:77785400-77785419 None:intergenic 45.0%
! AGATAGAAAGTGTGGGGACA+TGG + Chr2:77787181-77787200 MsG0280010974.01.T01:intron 45.0%
! CCGTTTCTGTCCATGTTTTC+AGG - Chr2:77785234-77785253 None:intergenic 45.0%
! CGTGATTAGTCCAATGTTGC+GGG + Chr2:77786793-77786812 MsG0280010974.01.T01:intron 45.0%
! GGTGAAGTTGAGTTGCTTGT+TGG - Chr2:77785187-77785206 None:intergenic 45.0%
! GTTTTGTGGCAGAATGTTGG+TGG + Chr2:77787788-77787807 MsG0280010974.01.T01:intron 45.0%
!! ACGGCCTCACATTTTTGAGA+TGG - Chr2:77784498-77784517 None:intergenic 45.0%
!! ATCTACTAGTGTAGTGGACC+CGG - Chr2:77782477-77782496 None:intergenic 45.0%
!! CAATTTTGGCCCCCATGTTT+AGG + Chr2:77786481-77786500 MsG0280010974.01.T01:intron 45.0%
!! CAGTCGGTTTTTACAAGGTG+CGG + Chr2:77786010-77786029 MsG0280010974.01.T01:intron 45.0%
!!! GTTTTCAGGTGTGAGTGTGA+CGG - Chr2:77785220-77785239 None:intergenic 45.0%
!!! TTTTGATTGTGGGTTGGGTG+GGG + Chr2:77785985-77786004 MsG0280010974.01.T01:intron 45.0%
!!! TAATAATACATTTTTTTTTT+TGG + Chr2:77782878-77782897 MsG0280010974.01.T01:intron 5.0%
AAGGCGTAGTCTACGGAGAT+TGG - Chr2:77784879-77784898 None:intergenic 50.0%
AATACTTCGAGGGATCCTCG+AGG - Chr2:77785160-77785179 None:intergenic 50.0%
ATGACTATCTCGGGCAACAC+CGG + Chr2:77782455-77782474 MsG0280010974.01.T01:intron 50.0%
ATGTTGTGACCGCGTGAATG+CGG + Chr2:77784832-77784851 MsG0280010974.01.T01:intron 50.0%
CAAGCATACGGAAGGGTCAA+AGG + Chr2:77787818-77787837 MsG0280010974.01.T01:CDS 50.0%
CAAGGATTCAGGCAACCCAT+TGG - Chr2:77787859-77787878 None:intergenic 50.0%
CGCACCTTGTAAAAACCGAC+TGG - Chr2:77786012-77786031 None:intergenic 50.0%
CGGAAGACGTGGCAAAGATA+AGG + Chr2:77786042-77786061 MsG0280010974.01.T01:CDS 50.0%
CTCAGAACAGACGCTGAAAC+CGG + Chr2:77785370-77785389 MsG0280010974.01.T01:CDS 50.0%
CTTAGTCTGGCCGGAAATCA+TGG - Chr2:77787001-77787020 None:intergenic 50.0%
GCAGCTAGTGCTAAAAGGAG+TGG - Chr2:77783469-77783488 None:intergenic 50.0%
GGAAACTACGGTCTACAGGA+AGG + Chr2:77785060-77785079 MsG0280010974.01.T01:intron 50.0%
GGAGTGGGAGTTAGAAACTC+CGG + Chr2:77785403-77785422 MsG0280010974.01.T01:CDS 50.0%
GGATACTAATCCGGAAGACG+TGG + Chr2:77786031-77786050 MsG0280010974.01.T01:CDS 50.0%
GTTTCCGGTGACTCTTCTGA+CGG + Chr2:77785484-77785503 MsG0280010974.01.T01:CDS 50.0%
TAGTCTGGCCGGAAATCATG+GGG - Chr2:77786999-77787018 None:intergenic 50.0%
TCAGAACAGACGCTGAAACC+GGG + Chr2:77785371-77785390 MsG0280010974.01.T01:CDS 50.0%
TCCGGTGACGATGAACAGAA+TGG + Chr2:77785421-77785440 MsG0280010974.01.T01:CDS 50.0%
! GTGGTGTCAGGGAGAGAATA+TGG - Chr2:77783680-77783699 None:intergenic 50.0%
! TGATCGGAAGGCGTAGTCTA+CGG - Chr2:77784886-77784905 None:intergenic 50.0%
!! AGTGTTGGTGACTTCATCGC+TGG - Chr2:77785281-77785300 None:intergenic 50.0%
!! GGGTCCAGTCGGTTTTTACA+AGG + Chr2:77786005-77786024 MsG0280010974.01.T01:intron 50.0%
AACCGGGAAACCACAAGGAG+TGG + Chr2:77785387-77785406 MsG0280010974.01.T01:CDS 55.0%
ACCGGGAAACCACAAGGAGT+GGG + Chr2:77785388-77785407 MsG0280010974.01.T01:CDS 55.0%
ACGCGGGTTTCCGAGAGTTT+CGG + Chr2:77785516-77785535 MsG0280010974.01.T01:CDS 55.0%
GCTGAAACCGGGAAACCACA+AGG + Chr2:77785382-77785401 MsG0280010974.01.T01:CDS 55.0%
TCCCACTCCTTGTGGTTTCC+CGG - Chr2:77785392-77785411 None:intergenic 55.0%
TCTGAGCACCAAACCCCACT+CGG - Chr2:77785356-77785375 None:intergenic 55.0%
TGACTATCTCGGGCAACACC+GGG + Chr2:77782456-77782475 MsG0280010974.01.T01:intron 55.0%
TGGCGTAGTCATGTCACACG+AGG + Chr2:77787133-77787152 MsG0280010974.01.T01:intron 55.0%
! GAGTGTGACGGAGAACGTAC+CGG - Chr2:77785208-77785227 None:intergenic 55.0%
ACCGCCGTCAGAAGAGTCAC+CGG - Chr2:77785491-77785510 None:intergenic 60.0%
CGGGTTTCCGAGAGTTTCGG+AGG + Chr2:77785519-77785538 MsG0280010974.01.T01:CDS 60.0%
GAAACTCTCGGAAACCCGCG+TGG - Chr2:77785517-77785536 None:intergenic 60.0%
GAGGGATCCTCGAGGATCCT+TGG - Chr2:77785152-77785171 None:intergenic 60.0%
GGCCGGAAATCATGGGGTGA+TGG - Chr2:77786993-77787012 None:intergenic 60.0%
TCCGGTGACTCTTCTGACGG+CGG + Chr2:77785487-77785506 MsG0280010974.01.T01:CDS 60.0%
GAGAGCAGCCGAGTGGGGTT+TGG + Chr2:77785345-77785364 MsG0280010974.01.T01:CDS 65.0%
GCACAGAGAGCAGCCGAGTG+GGG + Chr2:77785340-77785359 MsG0280010974.01.T01:CDS 65.0%
GGCACAGAGAGCAGCCGAGT+GGG + Chr2:77785339-77785358 MsG0280010974.01.T01:CDS 65.0%
TCTGACGGCGGTGATCCACG+CGG + Chr2:77785499-77785518 MsG0280010974.01.T01:CDS 65.0%
! TGGGTTGGGTGGGGTCCAGT+CGG + Chr2:77785994-77786013 MsG0280010974.01.T01:intron 65.0%
CGGCACAGAGAGCAGCCGAG+TGG + Chr2:77785338-77785357 MsG0280010974.01.T01:CDS 70.0%
CTCGGCTGCTCTCTGTGCCG+CGG - Chr2:77785338-77785357 None:intergenic 70.0%
CTGACGGCGGTGATCCACGC+GGG + Chr2:77785500-77785519 MsG0280010974.01.T01:CDS 70.0%
GGAAGGAGAAACCGGCGCCG+CGG + Chr2:77785318-77785337 MsG0280010974.01.T01:CDS 70.0%
TGCTCTCTGTGCCGCGGCGC+CGG - Chr2:77785332-77785351 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 77781907 77787971 77781907 ID=MsG0280010974.01;Name=MsG0280010974.01
Chr2 mRNA 77781907 77787971 77781907 ID=MsG0280010974.01.T01;Parent=MsG0280010974.01;Name=MsG0280010974.01.T01;_AED=0.56;_eAED=0.59;_QI=0|0.33|0.25|0.75|1|1|4|0|296
Chr2 exon 77781907 77782072 77781907 ID=MsG0280010974.01.T01:exon:11466;Parent=MsG0280010974.01.T01
Chr2 exon 77785248 77785617 77785248 ID=MsG0280010974.01.T01:exon:11467;Parent=MsG0280010974.01.T01
Chr2 exon 77786013 77786195 77786013 ID=MsG0280010974.01.T01:exon:11468;Parent=MsG0280010974.01.T01
Chr2 exon 77787800 77787971 77787800 ID=MsG0280010974.01.T01:exon:11469;Parent=MsG0280010974.01.T01
Chr2 CDS 77781907 77782072 77781907 ID=MsG0280010974.01.T01:cds;Parent=MsG0280010974.01.T01
Chr2 CDS 77785248 77785617 77785248 ID=MsG0280010974.01.T01:cds;Parent=MsG0280010974.01.T01
Chr2 CDS 77786013 77786195 77786013 ID=MsG0280010974.01.T01:cds;Parent=MsG0280010974.01.T01
Chr2 CDS 77787800 77787971 77787800 ID=MsG0280010974.01.T01:cds;Parent=MsG0280010974.01.T01
Gene Sequence

>MsG0280010974.01.T01

ATGGCTGCCAAATTTGACCTCATTGATAGCATAACAAACAATAATAACTACAGAGTATGGAGATTCAAGATTAGGATCATTAGAATGTGGAGAATGCCAAACTTTAAAGATAGAGACCAAGTTGATTTAATCGATATGGTTTTCATGGATGAAAAAGTATGCATCGAAACGGAAGAACAACACAAAGATTTCATTTCCAGCGATGAAGTCACCAACACTTCATGGATGGCAATCAAGGAAGGAGAAACCGGCGCCGCGGCACAGAGAGCAGCCGAGTGGGGTTTGGTGCTCAGAACAGACGCTGAAACCGGGAAACCACAAGGAGTGGGAGTTAGAAACTCCGGTGACGATGAACAGAATGGAAAGTTCTCCGGCAAAAGGAATTCTAATAACTCTGGCAGAGTTTCCGGTGACTCTTCTGACGGCGGTGATCCACGCGGGTTTCCGAGAGTTTCGGAGGATTTGAAAGATGCTTTATCTGCTTTTCAACAAACTTTCGTGGTTTCGGATGCTACCAAACCCGATTACCCGATTATTCGGTTTTTACAAGGTGCGGATACTAATCCGGAAGACGTGGCAAAGATAAGGGAAGCATTAGAAGGTGGGAAAAGTTATTGTGGAAGGTTACTGAATTACAAGAAGGATGGAACTCCATTCTGGAATCTTCTCACTATTTCACCCATCAAGGATGATGATGGCAATGTGCTCAAGTTAATTGGAATGTTGGTGGAAGTTAACAAGCATACGGAAGGGTCAAAGGAGAAGAATTTACGTCCCAATGGGTTGCCTGAATCCTTGATTCGATATGATGGTATGGTAATATTGGATGGATCTTCTTCCATTTCAATTTCATTGCGATTATATTTATACCATGAAAAACCATTGATGTAA

Protein sequence

>MsG0280010974.01.T01

MAAKFDLIDSITNNNNYRVWRFKIRIIRMWRMPNFKDRDQVDLIDMVFMDEKVCIETEEQHKDFISSDEVTNTSWMAIKEGETGAAAQRAAEWGLVLRTDAETGKPQGVGVRNSGDDEQNGKFSGKRNSNNSGRVSGDSSDGGDPRGFPRVSEDLKDALSAFQQTFVVSDATKPDYPIIRFLQGADTNPEDVAKIREALEGGKSYCGRLLNYKKDGTPFWNLLTISPIKDDDGNVLKLIGMLVEVNKHTEGSKEKNLRPNGLPESLIRYDGMVILDGSSSISISLRLYLYHEKPLM*