AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021691.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021691.01.T01 MTR_3g058400 91.694 301 25 0 1 301 1 301 0.0 569
MsG0480021691.01.T01 MTR_3g058220 78.738 301 63 1 1 301 1 300 2.18e-176 498
MsG0480021691.01.T01 MTR_3g058250 73.179 302 78 2 1 301 1 300 8.71e-160 455
MsG0480021691.01.T01 MTR_3g058390 70.530 302 86 2 1 301 1 300 3.11e-153 439
MsG0480021691.01.T01 MTR_0554s0020 70.764 301 88 0 1 301 1 301 1.69e-152 437
MsG0480021691.01.T01 MTR_3g058210 72.165 291 80 1 12 301 12 302 2.74e-150 431
MsG0480021691.01.T01 MTR_6g462640 66.556 302 98 2 1 301 1 300 5.45e-146 420
MsG0480021691.01.T01 MTR_3g058240 71.053 266 76 1 37 301 1 266 6.65e-140 404
MsG0480021691.01.T01 MTR_3g058380 82.273 220 39 0 82 301 1 220 9.17e-132 381
MsG0480021691.01.T01 MTR_1g035140 57.096 303 125 3 1 301 1 300 1.17e-115 343
MsG0480021691.01.T01 MTR_1g035190 58.214 280 114 2 24 301 7 285 2.50e-114 339
MsG0480021691.01.T01 MTR_1g442730 56.997 293 123 2 11 301 8 299 2.71e-112 334
MsG0480021691.01.T01 MTR_3g057980 54.785 303 127 5 1 301 1 295 2.19e-111 332
MsG0480021691.01.T01 MTR_3g058000 53.289 304 139 2 1 301 1 304 7.54e-111 331
MsG0480021691.01.T01 MTR_3g058060 55.263 304 132 3 1 301 1 303 8.32e-111 333
MsG0480021691.01.T01 MTR_3g058230 68.122 229 71 1 73 301 1 227 8.56e-109 323
MsG0480021691.01.T01 MTR_3g057900 53.465 303 131 4 1 301 1 295 2.09e-108 324
MsG0480021691.01.T01 MTR_3g057970 53.642 302 126 5 1 301 1 289 1.69e-106 319
MsG0480021691.01.T01 MTR_3g058110 52.632 304 141 3 1 301 1 304 3.76e-105 316
MsG0480021691.01.T01 MTR_8g466180 51.815 303 141 3 1 301 1 300 2.04e-104 314
MsG0480021691.01.T01 MTR_0059s0170 50.495 303 146 3 1 301 1 301 1.73e-101 306
MsG0480021691.01.T01 MTR_6g039630 52.555 274 127 1 1 274 1 271 1.66e-97 289
MsG0480021691.01.T01 MTR_5g094550 48.814 295 143 4 8 300 10 298 6.75e-92 282
MsG0480021691.01.T01 MTR_3g057800 50.376 266 130 2 36 301 35 298 1.19e-90 279
MsG0480021691.01.T01 MTR_5g094560 47.458 295 147 4 8 300 10 298 1.52e-90 278
MsG0480021691.01.T01 MTR_5g094660 49.815 271 130 2 31 300 32 297 2.49e-89 275
MsG0480021691.01.T01 MTR_5g019010 46.780 295 152 4 10 300 8 301 2.61e-88 273
MsG0480021691.01.T01 MTR_3g057860 47.138 297 151 4 6 300 8 300 5.22e-88 272
MsG0480021691.01.T01 MTR_5g094840 46.488 299 152 3 7 301 11 305 8.59e-87 269
MsG0480021691.01.T01 MTR_4g133750 47.079 291 146 3 13 300 12 297 3.98e-86 267
MsG0480021691.01.T01 MTR_5g094570 47.119 295 148 4 8 300 10 298 5.59e-86 267
MsG0480021691.01.T01 MTR_5g073250 46.309 298 147 5 7 301 12 299 6.57e-86 266
MsG0480021691.01.T01 MTR_5g095290 43.408 311 163 3 1 305 1 304 7.39e-86 266
MsG0480021691.01.T01 MTR_5g018980 47.183 284 143 3 25 301 22 305 1.49e-85 266
MsG0480021691.01.T01 MTR_5g094520 46.897 290 147 3 13 300 45 329 1.73e-85 266
MsG0480021691.01.T01 MTR_5g094540 45.763 295 152 4 8 300 10 298 3.55e-85 265
MsG0480021691.01.T01 MTR_5g018990 43.934 305 163 5 1 300 1 302 1.04e-82 258
MsG0480021691.01.T01 MTR_2g010530 46.570 277 143 2 24 300 21 292 2.08e-81 255
MsG0480021691.01.T01 MTR_5g095260 45.329 289 144 4 24 305 24 305 7.73e-81 253
MsG0480021691.01.T01 MTR_5g073320 46.350 274 139 3 31 301 32 300 8.51e-81 253
MsG0480021691.01.T01 MTR_3g057910 46.931 277 145 2 26 301 27 302 1.97e-80 253
MsG0480021691.01.T01 MTR_4g048580 43.421 304 162 5 1 300 1 298 8.07e-80 251
MsG0480021691.01.T01 MTR_6g035115 45.848 277 145 2 24 300 24 295 1.74e-78 247
MsG0480021691.01.T01 MTR_6g035100 46.048 291 146 4 13 300 12 294 1.21e-77 245
MsG0480021691.01.T01 MTR_5g073230 43.728 279 134 5 26 301 30 288 4.77e-73 233
MsG0480021691.01.T01 MTR_6g034965 41.438 292 158 6 13 300 12 294 9.55e-72 230
MsG0480021691.01.T01 MTR_5g095220 42.500 280 134 4 21 296 8 264 3.50e-69 223
MsG0480021691.01.T01 MTR_5g094535 45.249 221 103 2 13 232 14 217 3.48e-65 204
MsG0480021691.01.T01 MTR_5g094520 45.852 229 118 2 73 300 1 224 1.20e-64 209
MsG0480021691.01.T01 MTR_3g076530 39.731 297 165 4 10 301 15 302 1.54e-64 211
MsG0480021691.01.T01 MTR_2g065360 36.957 276 162 6 36 305 6 275 1.42e-56 189
MsG0480021691.01.T01 MTR_3g057990 37.500 272 113 4 1 272 1 215 3.35e-56 181
MsG0480021691.01.T01 MTR_5g070850 35.350 314 173 8 5 305 10 306 4.23e-56 189
MsG0480021691.01.T01 MTR_4g089030 35.621 306 186 5 2 301 16 316 3.74e-55 187
MsG0480021691.01.T01 MTR_4g071710 39.286 280 149 8 38 301 38 312 1.05e-54 186
MsG0480021691.01.T01 MTR_8g091690 34.539 304 177 6 5 301 1 289 4.57e-54 183
MsG0480021691.01.T01 MTR_1g023730 34.138 290 175 3 27 301 22 310 2.08e-53 182
MsG0480021691.01.T01 MTR_4g089020 36.000 275 172 4 28 301 21 292 5.73e-53 181
MsG0480021691.01.T01 MTR_1g023700 33.784 296 168 4 27 301 23 311 1.58e-52 180
MsG0480021691.01.T01 MTR_1g023720 32.484 314 193 4 3 301 1 310 1.73e-52 180
MsG0480021691.01.T01 MTR_5g470730 36.364 308 174 8 7 305 12 306 2.76e-52 177
MsG0480021691.01.T01 MTR_5g070920 37.540 309 170 7 7 306 12 306 2.98e-52 179
MsG0480021691.01.T01 MTR_4g104610 35.690 297 177 5 14 301 9 300 2.23e-51 176
MsG0480021691.01.T01 MTR_5g070710 35.948 306 168 8 7 301 11 299 4.00e-51 176
MsG0480021691.01.T01 MTR_5g070690 35.484 310 178 8 5 305 8 304 5.33e-51 176
MsG0480021691.01.T01 MTR_5g070800 35.484 310 178 8 5 305 8 304 5.33e-51 176
MsG0480021691.01.T01 MTR_3g076560 34.754 305 181 5 3 301 22 314 6.54e-51 176
MsG0480021691.01.T01 MTR_4g089055 37.453 267 163 4 36 301 51 314 9.22e-51 175
MsG0480021691.01.T01 MTR_8g076290 36.000 275 159 6 38 301 36 304 1.51e-50 174
MsG0480021691.01.T01 MTR_0022s0290 34.967 306 184 6 10 301 11 315 1.49e-49 172
MsG0480021691.01.T01 MTR_5g073240 56.391 133 57 1 16 147 61 193 3.32e-49 162
MsG0480021691.01.T01 MTR_4g104640 37.544 285 164 8 24 300 37 315 4.21e-49 171
MsG0480021691.01.T01 MTR_5g021390 33.660 306 181 8 7 301 18 312 9.35e-49 170
MsG0480021691.01.T01 MTR_5g094460 42.079 202 87 3 33 232 25 198 9.91e-49 167
MsG0480021691.01.T01 MTR_4g104550 34.286 280 175 4 26 301 17 291 1.10e-48 169
MsG0480021691.01.T01 MTR_3g076550 34.551 301 149 6 7 301 45 303 1.97e-48 168
MsG0480021691.01.T01 MTR_5g070700 36.184 304 172 7 7 301 12 302 2.02e-48 169
MsG0480021691.01.T01 MTR_4g089025 35.473 296 184 6 11 301 24 317 3.49e-48 169
MsG0480021691.01.T01 MTR_6g084770 33.000 300 184 8 11 301 12 303 2.35e-46 163
MsG0480021691.01.T01 MTR_0171s0020 30.351 313 199 8 1 301 1 306 2.57e-43 155
MsG0480021691.01.T01 MTR_4g133760 38.462 234 104 4 73 303 1 197 2.67e-43 153
MsG0480021691.01.T01 MTR_4g025950 32.967 273 170 4 38 302 30 297 2.70e-43 150
MsG0480021691.01.T01 MTR_5g070980 40.088 227 125 4 7 231 12 229 2.83e-43 148
MsG0480021691.01.T01 MTR_7g012860 30.797 276 182 3 32 301 28 300 5.12e-43 154
MsG0480021691.01.T01 MTR_0287s0060 30.797 276 182 3 32 301 28 300 5.12e-43 154
MsG0480021691.01.T01 MTR_7g012330 30.216 278 185 3 30 301 27 301 8.79e-43 154
MsG0480021691.01.T01 MTR_5g023680 34.317 271 168 3 37 301 5 271 1.16e-42 153
MsG0480021691.01.T01 MTR_4g104660 34.122 296 185 8 12 300 19 311 1.51e-42 153
MsG0480021691.01.T01 MTR_8g020940 31.373 306 196 5 3 299 1 301 1.62e-42 153
MsG0480021691.01.T01 MTR_5g094670 39.462 223 85 5 10 229 16 191 1.72e-42 147
MsG0480021691.01.T01 MTR_5g045770 32.841 271 170 4 38 301 30 295 3.31e-42 152
MsG0480021691.01.T01 MTR_4g026050 31.900 279 180 3 28 300 20 294 3.94e-42 152
MsG0480021691.01.T01 MTR_3g025260 32.026 306 180 8 12 301 8 301 3.15e-41 150
MsG0480021691.01.T01 MTR_4g025970 33.088 272 169 4 38 301 30 296 3.23e-41 149
MsG0480021691.01.T01 MTR_3g020780 31.373 306 192 7 6 301 10 307 4.34e-41 149
MsG0480021691.01.T01 MTR_8g020950 32.967 273 170 5 35 299 36 303 6.08e-41 149
MsG0480021691.01.T01 MTR_3g436540 32.000 275 170 7 36 301 39 305 7.87e-41 149
MsG0480021691.01.T01 MTR_4g025980 32.482 274 166 6 38 301 31 295 2.43e-40 147
MsG0480021691.01.T01 MTR_4g026200 32.982 285 181 3 28 306 20 300 5.07e-40 146
MsG0480021691.01.T01 MTR_4g026070 30.820 305 199 4 8 306 2 300 6.24e-40 142
MsG0480021691.01.T01 MTR_7g087520 32.500 280 175 7 32 300 32 308 9.37e-40 146
MsG0480021691.01.T01 MTR_8g104080 34.545 220 138 4 6 223 8 223 1.04e-39 140
MsG0480021691.01.T01 MTR_7g092620 30.855 269 161 7 5 262 9 263 3.66e-39 144
MsG0480021691.01.T01 MTR_3g436390 31.769 277 173 8 32 301 31 298 4.42e-39 144
MsG0480021691.01.T01 MTR_0181s0030 28.618 304 205 7 4 301 3 300 4.90e-39 144
MsG0480021691.01.T01 MTR_4g104540 35.043 234 143 4 73 301 1 230 2.83e-38 140
MsG0480021691.01.T01 MTR_3g077460 32.463 268 142 5 36 301 6 236 3.16e-38 139
MsG0480021691.01.T01 MTR_7g056103 33.333 282 176 8 28 301 25 302 4.19e-38 141
MsG0480021691.01.T01 MTR_4g062500 30.182 275 179 5 38 301 36 308 5.85e-38 141
MsG0480021691.01.T01 MTR_5g072980 31.618 272 176 4 37 301 33 301 2.34e-37 139
MsG0480021691.01.T01 MTR_5g072930 31.618 272 176 4 37 301 33 301 2.34e-37 139
MsG0480021691.01.T01 MTR_4g471620 41.579 190 100 5 14 198 15 198 2.81e-37 132
MsG0480021691.01.T01 MTR_4g109470 31.461 267 164 4 46 301 40 298 3.04e-37 139
MsG0480021691.01.T01 MTR_8g020960 29.043 303 194 6 7 299 11 302 3.49e-37 139
MsG0480021691.01.T01 MTR_5g016410 30.094 319 189 11 3 305 1 301 3.50e-36 135
MsG0480021691.01.T01 MTR_5g073020 30.147 272 180 4 37 301 33 301 8.02e-36 135
MsG0480021691.01.T01 MTR_3g025230 32.051 312 183 9 6 301 3 301 1.02e-35 135
MsG0480021691.01.T01 MTR_3g024520 31.731 312 184 9 6 301 3 301 1.81e-35 134
MsG0480021691.01.T01 MTR_4g102310 29.167 288 185 6 28 305 30 308 3.73e-35 133
MsG0480021691.01.T01 MTR_1g097240 29.412 272 180 7 38 301 28 295 4.79e-35 132
MsG0480021691.01.T01 MTR_5g016440 30.189 265 163 7 3 255 1 255 5.50e-35 132
MsG0480021691.01.T01 MTR_1g107305 28.731 268 176 5 48 302 49 314 1.32e-34 129
MsG0480021691.01.T01 MTR_0171s0010 27.796 313 209 8 1 301 1 308 1.22e-33 129
MsG0480021691.01.T01 MTR_7g103450 27.972 286 182 8 15 288 28 301 1.98e-33 128
MsG0480021691.01.T01 MTR_4g062510 28.253 269 174 6 48 301 48 312 2.00e-33 129
MsG0480021691.01.T01 MTR_5g007450 27.660 282 191 6 7 283 9 282 2.46e-33 128
MsG0480021691.01.T01 MTR_1g107295 28.839 267 175 5 48 301 49 313 1.07e-32 126
MsG0480021691.01.T01 MTR_1g103670 31.273 275 175 6 31 299 28 294 1.65e-32 125
MsG0480021691.01.T01 MTR_8g469300 29.851 268 165 7 48 301 46 304 2.21e-32 125
MsG0480021691.01.T01 MTR_5g007550 27.402 281 191 6 8 283 10 282 6.17e-32 124
MsG0480021691.01.T01 MTR_6g008620 27.445 317 207 8 8 305 14 326 7.08e-32 124
MsG0480021691.01.T01 MTR_1g031700 31.183 279 178 6 29 301 26 296 7.53e-32 124
MsG0480021691.01.T01 MTR_0638s0020 28.832 274 144 7 36 305 6 232 1.82e-31 122
MsG0480021691.01.T01 MTR_4g094775 30.435 276 163 10 7 264 6 270 1.89e-31 122
MsG0480021691.01.T01 MTR_7g092600 29.333 300 197 6 10 301 11 303 2.24e-31 122
MsG0480021691.01.T01 MTR_4g095050 29.965 287 171 8 37 305 31 305 2.86e-31 122
MsG0480021691.01.T01 MTR_6g008500 25.893 336 206 7 2 305 12 336 7.25e-31 121
MsG0480021691.01.T01 MTR_4g094772 31.200 250 157 7 15 260 19 257 5.97e-30 119
MsG0480021691.01.T01 MTR_5g094790 35.610 205 87 5 95 297 1 162 1.04e-29 112
MsG0480021691.01.T01 MTR_1g055325 28.814 295 191 7 5 293 30 311 1.14e-29 118
MsG0480021691.01.T01 MTR_4g062530 27.481 262 174 7 46 301 44 295 1.80e-29 116
MsG0480021691.01.T01 MTR_7g027960 27.899 276 178 8 37 301 31 296 3.24e-29 117
MsG0480021691.01.T01 MTR_0608s0010 31.159 276 168 6 29 301 26 282 3.45e-29 115
MsG0480021691.01.T01 MTR_4g088425 29.084 251 166 4 38 283 40 283 3.46e-29 116
MsG0480021691.01.T01 MTR_6g042610 26.523 279 186 5 45 305 42 319 6.47e-29 116
MsG0480021691.01.T01 MTR_1g103680 28.205 273 182 6 31 297 29 293 7.81e-29 115
MsG0480021691.01.T01 MTR_5g007460 26.022 269 183 6 30 289 4 265 1.37e-28 114
MsG0480021691.01.T01 MTR_4g018800 29.078 282 177 8 45 305 47 326 1.38e-28 115
MsG0480021691.01.T01 MTR_7g028020 27.536 276 179 8 37 301 31 296 2.07e-28 114
MsG0480021691.01.T01 MTR_8g046210 30.672 238 153 6 7 236 11 244 2.18e-28 114
MsG0480021691.01.T01 MTR_8g468780 29.167 240 154 6 73 301 1 235 5.98e-28 112
MsG0480021691.01.T01 MTR_4g102280 26.718 262 181 4 52 305 56 314 9.10e-28 112
MsG0480021691.01.T01 MTR_6g042540 27.211 294 194 6 30 305 27 318 1.03e-27 112
MsG0480021691.01.T01 MTR_2g437840 28.435 313 195 8 8 306 5 302 1.56e-27 112
MsG0480021691.01.T01 MTR_5g018480 27.734 256 168 6 38 279 41 293 1.87e-27 109
MsG0480021691.01.T01 MTR_8g036185 28.090 267 178 5 47 301 44 308 2.90e-27 111
MsG0480021691.01.T01 MTR_6g008530 27.950 322 192 11 5 301 20 326 3.35e-27 111
MsG0480021691.01.T01 MTR_6g008650 27.437 277 180 6 45 301 47 322 4.23e-27 110
MsG0480021691.01.T01 MTR_4g088400 26.437 261 170 6 38 283 47 300 6.51e-27 110
MsG0480021691.01.T01 MTR_6g008600 25.240 313 210 6 11 302 16 325 1.34e-26 109
MsG0480021691.01.T01 MTR_7g075610 30.097 206 135 4 26 223 23 227 2.50e-26 108
MsG0480021691.01.T01 MTR_8g046240 28.992 238 161 4 5 236 9 244 3.87e-26 108
MsG0480021691.01.T01 MTR_3g014880 28.975 283 175 8 45 304 47 326 4.79e-26 108
MsG0480021691.01.T01 MTR_4g088415 26.882 279 183 6 38 301 45 317 6.64e-26 105
MsG0480021691.01.T01 MTR_2g073420 26.621 293 199 6 12 293 14 301 1.74e-25 106
MsG0480021691.01.T01 MTR_8g012585 29.572 257 162 7 65 306 1 253 2.40e-25 105
MsG0480021691.01.T01 MTR_2g450040 26.182 275 184 6 45 304 46 316 3.64e-25 105
MsG0480021691.01.T01 MTR_6g008430 26.333 300 186 9 3 284 16 298 3.94e-25 105
MsG0480021691.01.T01 MTR_6g008640 28.723 282 174 7 45 304 47 323 4.39e-25 105
MsG0480021691.01.T01 MTR_7g075390 28.030 264 174 6 26 279 23 280 1.25e-24 103
MsG0480021691.01.T01 MTR_1g116890 25.723 311 187 11 14 301 16 305 2.04e-24 103
MsG0480021691.01.T01 MTR_3g465300 28.621 290 179 10 36 306 46 326 2.64e-24 103
MsG0480021691.01.T01 MTR_4g077210 27.372 274 174 8 47 306 45 307 3.90e-24 102
MsG0480021691.01.T01 MTR_3g467220 25.157 318 210 10 6 306 18 324 9.70e-24 101
MsG0480021691.01.T01 MTR_4g078110 29.183 257 168 5 31 287 22 264 1.19e-23 100
MsG0480021691.01.T01 MTR_8g012590 27.626 257 163 6 21 266 26 270 1.76e-23 100
MsG0480021691.01.T01 MTR_4g035330 29.600 250 157 9 17 260 18 254 2.09e-23 100
MsG0480021691.01.T01 MTR_6g022450 25.080 311 197 9 15 301 15 313 6.47e-23 99.0
MsG0480021691.01.T01 MTR_5g070685 41.228 114 56 2 3 116 14 116 3.54e-22 89.7
MsG0480021691.01.T01 MTR_3g057880 52.941 85 36 3 12 95 37 118 3.15e-21 87.4
MsG0480021691.01.T01 MTR_4g088170 24.161 298 211 7 13 301 8 299 4.82e-21 93.6
MsG0480021691.01.T01 MTR_4g088195 24.911 281 196 7 30 301 25 299 8.32e-21 92.8
MsG0480021691.01.T01 MTR_4g088160 24.199 281 198 7 30 301 25 299 9.23e-21 92.8
MsG0480021691.01.T01 MTR_2g073440 28.723 188 126 3 12 192 3 189 1.22e-20 92.0
MsG0480021691.01.T01 MTR_8g073950 25.237 317 208 8 11 306 14 322 1.40e-20 92.0
MsG0480021691.01.T01 MTR_3g467200 26.449 276 173 10 46 301 59 324 1.48e-20 92.0
MsG0480021691.01.T01 MTR_1g097220 26.910 301 197 10 12 300 34 323 1.67e-20 92.0
MsG0480021691.01.T01 MTR_2g437880 27.632 228 145 7 49 259 44 268 4.25e-20 90.5
MsG0480021691.01.T01 MTR_8g091680 27.059 255 131 8 54 301 44 250 8.51e-20 89.7
MsG0480021691.01.T01 MTR_7g075540 28.772 285 187 8 8 284 6 282 1.44e-19 89.0
MsG0480021691.01.T01 MTR_8g073960 25.633 316 205 9 8 301 14 321 1.62e-19 89.0
MsG0480021691.01.T01 MTR_1g037370 30.288 208 135 5 36 236 30 234 1.84e-19 89.0
MsG0480021691.01.T01 MTR_0155s0010 38.462 117 71 1 39 155 19 134 3.12e-19 82.8
MsG0480021691.01.T01 MTR_3g467290 25.868 317 198 10 6 298 23 326 3.39e-19 88.2
MsG0480021691.01.T01 MTR_1g091023 26.667 300 194 11 14 301 10 295 7.01e-19 87.0
MsG0480021691.01.T01 MTR_0171s0030 23.982 221 154 5 91 301 2 218 1.29e-18 85.9
MsG0480021691.01.T01 MTR_5g075450 26.425 193 131 3 12 200 14 199 1.55e-18 86.3
MsG0480021691.01.T01 MTR_1g091010 25.817 306 202 10 7 301 3 294 1.65e-18 85.9
MsG0480021691.01.T01 MTR_7g075600 24.167 240 169 4 54 284 50 285 6.34e-18 84.3
MsG0480021691.01.T01 MTR_7g075580 25.726 241 158 6 54 281 50 282 1.56e-17 83.2
MsG0480021691.01.T01 MTR_5g070830 32.308 195 116 6 116 301 225 412 2.31e-17 82.8
MsG0480021691.01.T01 MTR_8g076390 24.735 283 184 8 45 306 52 326 1.73e-16 80.1
MsG0480021691.01.T01 MTR_1g091003 25.338 296 203 9 14 301 10 295 2.01e-16 79.7
MsG0480021691.01.T01 MTR_1g111240 27.128 188 127 4 46 223 74 261 2.47e-16 79.7
MsG0480021691.01.T01 MTR_6g084910 36.975 119 68 4 116 231 3 117 3.75e-16 73.9
MsG0480021691.01.T01 MTR_2g105360 23.577 246 169 4 31 258 27 271 3.94e-16 79.0
MsG0480021691.01.T01 MTR_8g080520 28.151 238 142 9 40 260 70 295 4.11e-16 79.0
MsG0480021691.01.T01 MTR_8g076372 24.820 278 180 8 45 301 52 321 1.17e-15 77.4
MsG0480021691.01.T01 MTR_5g045250 25.869 259 166 11 39 283 58 304 1.51e-14 74.3
MsG0480021691.01.T01 MTR_2g010300 27.907 172 119 3 33 199 26 197 1.35e-13 71.2
MsG0480021691.01.T01 MTR_4g131830 27.232 224 152 7 10 226 9 228 2.02e-13 70.9
MsG0480021691.01.T01 MTR_3g058150 50.000 56 28 0 73 128 1 56 9.49e-13 62.8
MsG0480021691.01.T01 MTR_5g056720 24.091 220 139 5 65 276 24 223 3.87e-12 66.6
MsG0480021691.01.T01 MTR_2g073480 28.689 122 85 1 73 192 1 122 1.43e-11 65.1
MsG0480021691.01.T01 MTR_8g098565 27.962 211 136 8 62 262 59 263 8.01e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021691.01.T01 AT1G13110 35.294 306 179 8 6 300 3 300 5.82e-54 184
MsG0480021691.01.T01 AT3G26310 35.117 299 164 9 15 301 15 295 7.94e-52 178
MsG0480021691.01.T01 AT3G48280 32.558 301 188 3 1 301 1 286 2.44e-51 176
MsG0480021691.01.T01 AT3G48310 34.058 276 169 3 26 301 25 287 6.74e-51 175
MsG0480021691.01.T01 AT3G48320 32.404 287 181 3 15 301 14 287 1.45e-49 172
MsG0480021691.01.T01 AT5G57260 35.531 273 160 6 38 301 31 296 1.79e-49 172
MsG0480021691.01.T01 AT5G24950 32.491 277 174 4 30 301 25 293 2.40e-49 171
MsG0480021691.01.T01 AT4G13310 35.165 273 162 4 35 300 30 294 3.20e-49 168
MsG0480021691.01.T01 AT3G48270 33.696 276 173 3 26 301 21 286 4.21e-49 170
MsG0480021691.01.T01 AT3G48300 33.696 276 173 3 26 301 19 284 2.55e-48 168
MsG0480021691.01.T01 AT3G48300 33.696 276 173 3 26 301 21 286 2.65e-48 168
MsG0480021691.01.T01 AT4G13310 35.165 273 162 4 35 300 30 294 4.29e-48 168
MsG0480021691.01.T01 AT3G26320 34.397 282 168 6 29 301 23 296 1.25e-47 167
MsG0480021691.01.T01 AT3G26280 36.491 285 159 11 29 300 24 299 3.06e-46 163
MsG0480021691.01.T01 AT2G24180 35.252 278 164 6 33 301 32 302 3.07e-46 163
MsG0480021691.01.T01 AT3G48290 32.734 278 176 3 28 303 22 290 3.41e-46 163
MsG0480021691.01.T01 AT3G26280 36.491 285 159 11 29 300 41 316 3.65e-46 163
MsG0480021691.01.T01 AT3G26210 39.015 264 146 6 46 300 40 297 5.71e-46 162
MsG0480021691.01.T01 AT3G26270 33.929 280 171 8 29 299 24 298 1.29e-45 161
MsG0480021691.01.T01 AT3G48290 32.609 276 175 3 28 301 22 288 1.37e-45 161
MsG0480021691.01.T01 AT3G26330 33.700 273 164 6 38 301 32 296 1.67e-45 161
MsG0480021691.01.T01 AT5G25120 33.550 307 181 8 3 301 1 292 2.79e-45 160
MsG0480021691.01.T01 AT3G26290 32.281 285 170 7 29 301 23 296 5.84e-45 159
MsG0480021691.01.T01 AT1G13090 33.099 284 169 7 33 304 24 298 5.94e-45 155
MsG0480021691.01.T01 AT1G11610 31.408 277 176 4 30 301 26 293 6.16e-45 159
MsG0480021691.01.T01 AT3G26290 32.281 285 170 7 29 301 36 309 6.94e-45 159
MsG0480021691.01.T01 AT1G11610 31.408 277 176 4 30 301 26 293 7.36e-45 159
MsG0480021691.01.T01 AT2G30770 33.704 270 165 5 37 301 33 293 1.08e-44 159
MsG0480021691.01.T01 AT3G26300 32.107 299 174 8 15 301 15 296 1.23e-44 159
MsG0480021691.01.T01 AT5G24960 31.481 270 172 4 37 301 33 294 4.19e-44 155
MsG0480021691.01.T01 AT3G26170 32.476 311 184 12 3 300 1 298 4.67e-44 157
MsG0480021691.01.T01 AT5G07990 30.363 303 196 5 8 301 1 297 4.93e-44 157
MsG0480021691.01.T01 AT4G36220 33.704 270 163 7 45 301 48 314 9.43e-44 157
MsG0480021691.01.T01 AT5G24960 31.481 270 172 4 37 301 33 294 4.84e-43 154
MsG0480021691.01.T01 AT1G13090 33.214 280 166 7 33 300 24 294 8.77e-43 154
MsG0480021691.01.T01 AT5G04330 34.182 275 165 8 38 301 33 302 3.20e-42 152
MsG0480021691.01.T01 AT1G13080 33.981 309 179 9 6 301 3 299 5.29e-42 152
MsG0480021691.01.T01 AT3G26220 33.876 307 180 12 6 300 3 298 7.79e-42 151
MsG0480021691.01.T01 AT2G30750 32.624 282 175 5 26 301 21 293 8.40e-42 151
MsG0480021691.01.T01 AT4G13290 31.395 258 162 4 29 279 25 274 1.48e-41 150
MsG0480021691.01.T01 AT5G25180 32.248 307 178 9 5 301 6 292 2.27e-41 150
MsG0480021691.01.T01 AT2G02580 31.935 310 180 9 3 301 7 296 1.37e-40 148
MsG0480021691.01.T01 AT3G26230 33.887 301 178 10 11 300 5 295 1.53e-40 147
MsG0480021691.01.T01 AT5G25140 32.143 308 184 10 3 301 1 292 1.88e-40 147
MsG0480021691.01.T01 AT3G26180 31.068 309 191 10 3 300 1 298 2.64e-40 147
MsG0480021691.01.T01 AT3G44250 32.246 276 174 5 33 300 24 294 3.48e-40 147
MsG0480021691.01.T01 AT4G31500 29.603 277 184 4 31 301 23 294 2.02e-39 144
MsG0480021691.01.T01 AT3G26190 34.043 282 162 9 33 300 24 295 2.43e-39 144
MsG0480021691.01.T01 AT5G25130 32.061 262 163 6 1 256 1 253 5.63e-39 143
MsG0480021691.01.T01 AT5G42590 33.003 303 183 10 5 301 6 294 6.51e-39 143
MsG0480021691.01.T01 AT5G06900 32.234 273 170 5 37 301 34 299 7.50e-39 143
MsG0480021691.01.T01 AT3G26160 30.915 317 193 10 1 305 1 303 1.07e-38 142
MsG0480021691.01.T01 AT4G13770 30.719 306 191 7 4 301 3 295 6.57e-37 138
MsG0480021691.01.T01 AT3G26150 30.769 312 190 10 1 300 1 298 1.10e-36 137
MsG0480021691.01.T01 AT3G26200 32.517 286 169 9 29 300 20 295 1.44e-36 137
MsG0480021691.01.T01 AT5G06905 29.966 297 193 6 13 301 7 296 3.38e-35 133
MsG0480021691.01.T01 AT4G20240 28.261 276 183 5 31 300 27 293 4.46e-35 131
MsG0480021691.01.T01 AT4G20240 28.261 276 183 5 31 300 27 293 1.67e-34 130
MsG0480021691.01.T01 AT3G26830 30.065 306 189 8 6 300 3 294 2.24e-34 130
MsG0480021691.01.T01 AT1G01280 31.955 266 165 6 46 300 41 301 3.64e-34 130
MsG0480021691.01.T01 AT3G53280 29.964 277 178 7 33 300 24 293 7.38e-33 127
MsG0480021691.01.T01 AT4G12300 28.000 300 196 9 12 300 18 308 5.06e-32 124
MsG0480021691.01.T01 AT4G12320 28.269 283 189 8 28 301 34 311 9.35e-32 124
MsG0480021691.01.T01 AT2G42250 30.068 296 193 6 12 301 18 305 6.98e-31 121
MsG0480021691.01.T01 AT1G13100 30.112 269 163 9 46 300 37 294 8.35e-31 121
MsG0480021691.01.T01 AT4G22710 27.273 264 178 5 46 301 62 319 1.44e-30 120
MsG0480021691.01.T01 AT2G45560 27.517 298 196 7 8 292 9 299 3.49e-30 116
MsG0480021691.01.T01 AT3G53300 30.709 254 164 6 36 280 27 277 6.22e-30 119
MsG0480021691.01.T01 AT4G22690 26.894 264 179 5 46 301 93 350 9.08e-30 119
MsG0480021691.01.T01 AT2G45550 25.828 302 212 6 8 301 9 306 1.27e-29 118
MsG0480021691.01.T01 AT5G44620 27.652 264 178 5 46 301 55 313 1.45e-29 117
MsG0480021691.01.T01 AT2G45560 30.342 234 145 5 8 228 9 237 1.74e-29 112
MsG0480021691.01.T01 AT5G67310 24.920 313 209 9 3 306 16 311 1.78e-29 117
MsG0480021691.01.T01 AT2G45560 27.551 294 201 7 8 292 9 299 8.17e-29 115
MsG0480021691.01.T01 AT4G20235 28.295 258 153 8 5 256 3 234 3.13e-28 111
MsG0480021691.01.T01 AT2G25160 28.571 294 181 10 5 280 6 288 4.94e-28 112
MsG0480021691.01.T01 AT5G10610 27.063 303 202 6 8 302 4 295 5.68e-28 113
MsG0480021691.01.T01 AT4G37320 26.582 316 197 10 4 305 5 299 7.08e-28 113
MsG0480021691.01.T01 AT2G25160 28.571 294 181 10 5 280 6 288 1.42e-27 112
MsG0480021691.01.T01 AT4G15330 26.821 302 201 5 5 300 14 301 1.97e-27 112
MsG0480021691.01.T01 AT2G40890 26.786 280 180 6 35 300 25 293 2.53e-27 111
MsG0480021691.01.T01 AT3G20940 25.436 287 203 4 26 306 31 312 1.14e-26 109
MsG0480021691.01.T01 AT3G52970 27.027 259 178 5 36 286 35 290 1.55e-26 109
MsG0480021691.01.T01 AT3G20140 26.573 286 190 7 26 301 31 306 1.57e-26 109
MsG0480021691.01.T01 AT1G33720 28.383 303 203 8 8 301 9 306 2.20e-26 108
MsG0480021691.01.T01 AT4G37330 28.662 314 192 8 4 306 5 297 3.07e-26 108
MsG0480021691.01.T01 AT1G50520 27.509 269 171 6 46 301 52 309 6.60e-26 107
MsG0480021691.01.T01 AT4G37310 26.990 289 189 7 31 305 24 304 8.55e-26 107
MsG0480021691.01.T01 AT3G20110 27.124 306 199 7 10 301 8 303 1.42e-25 106
MsG0480021691.01.T01 AT2G45570 27.181 298 203 7 3 288 1 296 1.48e-25 106
MsG0480021691.01.T01 AT4G37340 25.879 313 196 11 11 306 7 300 2.35e-25 105
MsG0480021691.01.T01 AT4G15360 26.403 303 207 5 5 301 14 306 2.87e-25 105
MsG0480021691.01.T01 AT2G23220 28.425 292 181 10 28 305 37 314 3.56e-25 105
MsG0480021691.01.T01 AT5G10600 27.143 280 178 9 36 302 45 311 4.96e-25 105
MsG0480021691.01.T01 AT3G52970 26.007 273 177 5 36 286 35 304 5.76e-25 105
MsG0480021691.01.T01 AT3G20090 27.961 304 201 6 5 301 16 308 6.61e-25 104
MsG0480021691.01.T01 AT2G23190 26.582 316 196 10 5 306 51 344 6.66e-25 104
MsG0480021691.01.T01 AT4G31970 27.344 256 161 8 45 279 40 291 5.78e-24 102
MsG0480021691.01.T01 AT4G12330 25.468 267 179 8 46 301 55 312 8.16e-24 101
MsG0480021691.01.T01 AT5G42580 23.577 246 172 3 58 301 60 291 9.02e-24 101
MsG0480021691.01.T01 AT4G37430 36.242 149 92 3 11 157 1 148 1.02e-23 101
MsG0480021691.01.T01 AT4G12310 25.651 269 187 7 46 305 53 317 1.22e-23 101
MsG0480021691.01.T01 AT3G20950 24.839 310 217 5 5 306 14 315 1.45e-23 100
MsG0480021691.01.T01 AT2G14100 27.068 266 178 7 48 305 54 311 2.48e-23 100
MsG0480021691.01.T01 AT3G32047 25.828 302 207 5 5 300 14 304 3.35e-23 99.8
MsG0480021691.01.T01 AT4G31940 27.734 256 161 8 45 279 40 292 4.37e-23 99.4
MsG0480021691.01.T01 AT3G20130 22.761 268 179 6 48 301 53 306 5.63e-23 99.4
MsG0480021691.01.T01 AT3G25180 26.690 281 189 7 11 278 12 288 8.20e-23 97.8
MsG0480021691.01.T01 AT4G37410 33.854 192 117 6 11 194 1 190 1.14e-22 98.2
MsG0480021691.01.T01 AT5G36220 24.183 306 207 6 14 305 11 305 1.23e-22 98.2
MsG0480021691.01.T01 AT5G57220 30.319 188 126 4 12 195 3 189 1.31e-22 97.8
MsG0480021691.01.T01 AT2G27000 26.761 284 189 6 28 301 30 304 2.14e-22 97.4
MsG0480021691.01.T01 AT3G25180 26.690 281 189 7 11 278 12 288 3.08e-22 97.1
MsG0480021691.01.T01 AT3G61040 26.277 274 183 6 36 301 32 294 3.53e-22 95.9
MsG0480021691.01.T01 AT3G61040 25.979 281 189 6 29 301 25 294 9.11e-22 95.5
MsG0480021691.01.T01 AT1G50560 24.715 263 183 4 48 301 54 310 1.50e-21 95.1
MsG0480021691.01.T01 AT5G09970 26.730 318 197 15 4 300 29 331 5.83e-21 93.2
MsG0480021691.01.T01 AT3G20100 25.185 270 175 7 46 301 50 306 1.16e-20 92.4
MsG0480021691.01.T01 AT5G35715 27.848 237 158 6 73 300 1 233 1.62e-20 91.7
MsG0480021691.01.T01 AT1G74110 26.537 309 197 10 1 287 23 323 1.67e-20 92.0
MsG0480021691.01.T01 AT5G47990 23.077 260 189 3 48 301 53 307 2.98e-20 91.3
MsG0480021691.01.T01 AT1G28430 24.832 298 212 4 9 300 12 303 5.79e-20 90.5
MsG0480021691.01.T01 AT3G20080 26.667 285 190 6 26 300 31 306 7.30e-20 90.1
MsG0480021691.01.T01 AT3G20080 26.667 285 190 6 26 300 31 306 7.30e-20 90.1
MsG0480021691.01.T01 AT2G05180 25.573 262 182 4 47 301 51 306 9.43e-20 89.4
MsG0480021691.01.T01 AT4G37360 24.345 267 175 9 3 253 1 256 1.45e-19 89.4
MsG0480021691.01.T01 AT4G37400 25.000 272 177 9 46 306 40 295 3.37e-19 88.2
MsG0480021691.01.T01 AT3G28740 25.610 246 159 5 72 306 76 308 5.39e-19 87.4
MsG0480021691.01.T01 AT4G37370 25.714 315 201 12 3 301 1 298 9.48e-19 86.7
MsG0480021691.01.T01 AT1G74550 30.729 192 119 5 37 220 27 212 1.49e-18 86.3
MsG0480021691.01.T01 AT3G20960 23.108 251 166 4 65 301 69 306 3.41e-18 85.1
MsG0480021691.01.T01 AT3G20120 24.815 270 171 5 48 301 52 305 3.66e-18 85.1
MsG0480021691.01.T01 AT4G15350 23.954 263 184 6 48 301 45 300 3.98e-18 85.1
MsG0480021691.01.T01 AT2G45580 28.322 286 189 8 27 301 28 308 7.46e-18 83.6
MsG0480021691.01.T01 AT2G45580 27.068 266 178 8 47 301 48 308 1.21e-17 83.6
MsG0480021691.01.T01 AT3G53290 26.667 225 148 7 91 304 11 229 1.78e-17 82.8
MsG0480021691.01.T01 AT2G46660 25.564 266 171 10 25 279 58 307 3.34e-17 82.4
MsG0480021691.01.T01 AT3G53305 33.537 164 101 4 73 228 1 164 3.79e-17 80.9
MsG0480021691.01.T01 AT3G03470 26.336 262 170 8 33 282 27 277 1.35e-16 80.5
MsG0480021691.01.T01 AT1G11600 26.906 223 156 5 10 226 9 230 1.41e-16 80.5
MsG0480021691.01.T01 AT1G16410 23.003 313 216 8 6 298 14 321 4.10e-16 78.6
MsG0480021691.01.T01 AT3G26180 37.391 115 66 4 3 117 1 109 4.67e-16 78.2
MsG0480021691.01.T01 AT2G27010 25.249 301 182 8 7 301 19 282 5.57e-16 78.6
MsG0480021691.01.T01 AT1G16410 23.003 313 216 8 6 298 14 321 5.91e-16 78.6
MsG0480021691.01.T01 AT4G31950 25.681 257 153 10 45 279 40 280 6.99e-16 78.2
MsG0480021691.01.T01 AT1G79370 23.794 311 199 9 14 294 24 326 1.15e-15 77.8
MsG0480021691.01.T01 AT3G10560 30.435 161 106 4 14 168 20 180 1.41e-15 77.4
MsG0480021691.01.T01 AT2G22330 22.756 312 206 9 8 300 60 355 2.79e-15 76.6
MsG0480021691.01.T01 AT2G22330 22.756 312 206 9 8 300 37 332 2.79e-15 76.6
MsG0480021691.01.T01 AT1G16400 23.003 313 216 9 9 298 10 320 2.96e-15 76.6
MsG0480021691.01.T01 AT1G58260 22.977 309 210 11 12 298 10 312 6.08e-15 75.5
MsG0480021691.01.T01 AT4G39950 24.762 315 204 10 8 300 27 330 6.95e-15 75.5
MsG0480021691.01.T01 AT4G39950 24.762 315 204 10 8 300 67 370 1.05e-14 74.7
MsG0480021691.01.T01 AT5G61320 27.354 223 145 8 62 271 58 276 1.49e-14 74.3
MsG0480021691.01.T01 AT1G64950 24.812 266 186 7 30 282 25 289 3.49e-14 73.2
MsG0480021691.01.T01 AT2G12190 24.345 267 188 7 29 282 24 289 1.19e-13 71.6
MsG0480021691.01.T01 AT4G15330 23.179 302 184 6 5 300 14 273 1.43e-13 71.2
MsG0480021691.01.T01 AT1G74540 23.529 238 159 7 5 232 2 226 1.51e-13 71.2
MsG0480021691.01.T01 AT5G05260 26.259 278 162 12 8 255 8 272 4.04e-13 70.1
MsG0480021691.01.T01 AT3G61880 26.552 290 180 13 25 300 54 324 5.78e-13 69.7
MsG0480021691.01.T01 AT3G61880 26.552 290 180 13 25 300 54 324 8.15e-13 69.3
MsG0480021691.01.T01 AT5G05260 27.907 172 108 5 8 168 8 174 1.21e-12 68.6
MsG0480021691.01.T01 AT4G15380 25.079 315 204 8 2 300 3 301 1.95e-12 67.8
MsG0480021691.01.T01 AT2G30490 29.442 197 128 3 8 200 10 199 3.40e-12 67.0
MsG0480021691.01.T01 AT5G25900 23.293 249 170 6 37 266 41 287 8.21e-12 65.9
MsG0480021691.01.T01 AT3G61035 27.442 215 106 7 46 239 51 236 1.42e-11 64.7
MsG0480021691.01.T01 AT5G35917 24.749 299 174 13 37 300 42 324 2.07e-11 64.7

Find 59 sgRNAs with CRISPR-Local

Find 69 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTATAATTGGTAGCTTTAT+AGG 0.131100 4:-62986405 None:intergenic
TGCAATATTTCACTGGTTTA+AGG 0.136397 4:+62986967 MsG0480021691.01.T01:CDS
CTGCTTCTTGTGGCAACTAT+TGG 0.213872 4:+62986652 MsG0480021691.01.T01:CDS
GAGAACTCTTCTTCTCTAAT+TGG 0.239515 4:-62986738 None:intergenic
GGTAGCTTTATAGGCCCTTT+AGG 0.255792 4:-62986396 None:intergenic
TATTATTCTTACCAAGATTA+TGG 0.266949 4:-62987177 None:intergenic
TTGTGTAAATTTCCTATAAT+TGG 0.268961 4:-62986417 None:intergenic
CCTATAAAGCTACCAATTAT+AGG 0.284221 4:+62986405 MsG0480021691.01.T01:CDS
AGAGATTTGGCTAGAAAATA+TGG 0.289884 4:+62986471 MsG0480021691.01.T01:CDS
TGTTTCAGCTTGGTCATAAC+TGG 0.301329 4:-62987072 None:intergenic
GTAGCTTTATAGGCCCTTTA+GGG 0.312710 4:-62986395 None:intergenic
ACATCAAAAGCTAAGAGATT+TGG 0.387596 4:+62986458 MsG0480021691.01.T01:CDS
ATCGTTTCAAAATCTGCCTT+TGG 0.387916 4:+62986840 MsG0480021691.01.T01:CDS
TCTACAGATTGATCAGATAA+TGG 0.401117 4:+62987010 MsG0480021691.01.T01:CDS
CTTCTTGTGGCAACTATTGG+AGG 0.413614 4:+62986655 MsG0480021691.01.T01:CDS
TATTGCAGCCATGTAATAGA+AGG 0.413703 4:-62986951 None:intergenic
CCCTTGATGCATCTTCAACT+TGG 0.414015 4:+62986495 MsG0480021691.01.T01:CDS
ATTTGTTTCCTTCTATTACA+TGG 0.439569 4:+62986943 MsG0480021691.01.T01:CDS
CAATATCAAGGCCATAATCT+TGG 0.454133 4:+62987166 MsG0480021691.01.T01:CDS
CTGCTGATATAAATTTGTCT+TGG 0.457791 4:-62986878 None:intergenic
AGTTCTCTAATCTTGTCAAA+TGG 0.459743 4:+62986754 MsG0480021691.01.T01:CDS
ATACTTGCTTATAATTCTAC+AGG 0.465921 4:+62986621 MsG0480021691.01.T01:CDS
TGTCAAATGGATTGCTTCGA+AGG 0.466128 4:+62986767 MsG0480021691.01.T01:CDS
TTTCATCACCTGACTGTGCT+AGG 0.479163 4:+62986538 MsG0480021691.01.T01:CDS
TACAGCTTCAGTGAGGTTGA+TGG 0.480870 4:-62986799 None:intergenic
ATCACCGAAGCTAGCGTTGG+AGG 0.489482 4:-62986600 None:intergenic
TGACTTGGCCTCTTTGTGAT+CGG 0.490895 4:-62987045 None:intergenic
ACATGGCTGCAATATTTCAC+TGG 0.492450 4:+62986960 MsG0480021691.01.T01:CDS
CTTGACTAAAGACAATATCA+AGG 0.495267 4:+62987154 MsG0480021691.01.T01:CDS
ATCACCTCCCTAGCACAGTC+AGG 0.503650 4:-62986546 None:intergenic
ACTCTTCTTCTCTAATTGGC+TGG 0.504713 4:-62986734 None:intergenic
AAGGCCTCCAACGCTAGCTT+CGG 0.506009 4:+62986596 MsG0480021691.01.T01:CDS
AGCTGAAACAGATAAAGATC+TGG 0.509017 4:+62987085 MsG0480021691.01.T01:CDS
TCAACTTATAAGCTCCCTAA+AGG 0.513003 4:+62986381 MsG0480021691.01.T01:CDS
GAGTTAGTAAAGGTTGCAGC+AGG 0.513252 4:+62986906 MsG0480021691.01.T01:CDS
GATCTTTATCTGTTTCAGCT+TGG 0.514569 4:-62987082 None:intergenic
ACAGCTTCAGTGAGGTTGAT+GGG 0.518502 4:-62986798 None:intergenic
CAACTTATAAGCTCCCTAAA+GGG 0.519189 4:+62986382 MsG0480021691.01.T01:CDS
ATGACATTAACTTTGCAGAA+AGG 0.522804 4:+62986577 MsG0480021691.01.T01:CDS
TCCAAGTTGAAGATGCATCA+AGG 0.523441 4:-62986496 None:intergenic
TTCATCACCTGACTGTGCTA+GGG 0.531506 4:+62986539 MsG0480021691.01.T01:CDS
AAATGGATTGCTTCGAAGGA+AGG 0.537078 4:+62986771 MsG0480021691.01.T01:CDS
TCTGTAGATGCACCCTCTCA+AGG 0.538928 4:-62986995 None:intergenic
GTCTTTACACTTCTTGCCAA+AGG 0.540103 4:-62986856 None:intergenic
AGCAGTAAAAGAGTTAGTAA+AGG 0.551014 4:+62986896 MsG0480021691.01.T01:CDS
GTTTAAGGCGTAACCTTGAG+AGG 0.560539 4:+62986982 MsG0480021691.01.T01:CDS
GTAGATGATTTCTAGAGCCA+TGG 0.567616 4:-62986283 None:intergenic
GGTATAGCTTCTGCTTCTTG+TGG 0.577390 4:+62986642 MsG0480021691.01.T01:CDS
CCAAGTTGAAGATGCATCAA+GGG 0.578944 4:-62986495 None:intergenic
GTTCTCATAAGATATGAAGA+TGG 0.586900 4:+62987113 MsG0480021691.01.T01:CDS
AGTATCACCGAAGCTAGCGT+TGG 0.591550 4:-62986603 None:intergenic
TCAACTTGGAGAGATTTCCA+TGG 0.597748 4:+62986509 MsG0480021691.01.T01:CDS
ATCACCTGACTGTGCTAGGG+AGG 0.602191 4:+62986542 MsG0480021691.01.T01:CDS
AGGTGATGAAATTACAACCA+TGG 0.622525 4:-62986526 None:intergenic
CATCATCACCGATCACAAAG+AGG 0.624225 4:+62987037 MsG0480021691.01.T01:CDS
ATATGAAGATGGCAACAACC+AGG 0.636177 4:+62987124 MsG0480021691.01.T01:CDS
TTTAAGGCGTAACCTTGAGA+GGG 0.644552 4:+62986983 MsG0480021691.01.T01:CDS
AACAAGGGCTAAGAGAACAA+AGG 0.682362 4:-62986322 None:intergenic
TAGAAATTACAGCTTCAGTG+AGG 0.704974 4:-62986806 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTCTTACCAAGATTA+TGG - Chr4:62987180-62987199 None:intergenic 20.0%
!! TTGTGTAAATTTCCTATAAT+TGG - Chr4:62986420-62986439 None:intergenic 20.0%
! ATACTTGCTTATAATTCTAC+AGG + Chr4:62986621-62986640 MsG0480021691.01.T01:CDS 25.0%
! ATTTGTTTCCTTCTATTACA+TGG + Chr4:62986943-62986962 MsG0480021691.01.T01:CDS 25.0%
ACATCAAAAGCTAAGAGATT+TGG + Chr4:62986458-62986477 MsG0480021691.01.T01:CDS 30.0%
AGAGATTTGGCTAGAAAATA+TGG + Chr4:62986471-62986490 MsG0480021691.01.T01:CDS 30.0%
AGCAGTAAAAGAGTTAGTAA+AGG + Chr4:62986896-62986915 MsG0480021691.01.T01:CDS 30.0%
AGTTCTCTAATCTTGTCAAA+TGG + Chr4:62986754-62986773 MsG0480021691.01.T01:CDS 30.0%
ATGACATTAACTTTGCAGAA+AGG + Chr4:62986577-62986596 MsG0480021691.01.T01:CDS 30.0%
CAAAGGAAAAAAGATAACAC+AGG - Chr4:62986308-62986327 None:intergenic 30.0%
CCTATAAAGCTACCAATTAT+AGG + Chr4:62986405-62986424 MsG0480021691.01.T01:CDS 30.0%
CTGCTGATATAAATTTGTCT+TGG - Chr4:62986881-62986900 None:intergenic 30.0%
CTTGACTAAAGACAATATCA+AGG + Chr4:62987154-62987173 MsG0480021691.01.T01:CDS 30.0%
CTTTAGTCAAGAAAAATTCC+TGG - Chr4:62987145-62987164 None:intergenic 30.0%
GTTCTCATAAGATATGAAGA+TGG + Chr4:62987113-62987132 MsG0480021691.01.T01:CDS 30.0%
TCTACAGATTGATCAGATAA+TGG + Chr4:62987010-62987029 MsG0480021691.01.T01:CDS 30.0%
!! AAATCTCTTAGCTTTTGATG+TGG - Chr4:62986459-62986478 None:intergenic 30.0%
!! CCTATAATTGGTAGCTTTAT+AGG - Chr4:62986408-62986427 None:intergenic 30.0%
!! TGCAATATTTCACTGGTTTA+AGG + Chr4:62986967-62986986 MsG0480021691.01.T01:CDS 30.0%
!!! TCCTACTTTTTGTACAACAA+GGG - Chr4:62986340-62986359 None:intergenic 30.0%
!!! TTCCTACTTTTTGTACAACA+AGG - Chr4:62986341-62986360 None:intergenic 30.0%
AGCTGAAACAGATAAAGATC+TGG + Chr4:62987085-62987104 MsG0480021691.01.T01:CDS 35.0%
AGGTGATGAAATTACAACCA+TGG - Chr4:62986529-62986548 None:intergenic 35.0%
ATCGTTTCAAAATCTGCCTT+TGG + Chr4:62986840-62986859 MsG0480021691.01.T01:CDS 35.0%
CAACTTATAAGCTCCCTAAA+GGG + Chr4:62986382-62986401 MsG0480021691.01.T01:CDS 35.0%
CAATATCAAGGCCATAATCT+TGG + Chr4:62987166-62987185 MsG0480021691.01.T01:CDS 35.0%
GAGAACTCTTCTTCTCTAAT+TGG - Chr4:62986741-62986760 None:intergenic 35.0%
GATCTTTATCTGTTTCAGCT+TGG - Chr4:62987085-62987104 None:intergenic 35.0%
GCTAAGAAAAATTTGCACCT+TGG + Chr4:62986680-62986699 MsG0480021691.01.T01:CDS 35.0%
TAGAAATTACAGCTTCAGTG+AGG - Chr4:62986809-62986828 None:intergenic 35.0%
TATTGCAGCCATGTAATAGA+AGG - Chr4:62986954-62986973 None:intergenic 35.0%
TCAACTTATAAGCTCCCTAA+AGG + Chr4:62986381-62986400 MsG0480021691.01.T01:CDS 35.0%
!!! AAAGGCAGATTTTGAAACGA+TGG - Chr4:62986841-62986860 None:intergenic 35.0%
AACAAGGGCTAAGAGAACAA+AGG - Chr4:62986325-62986344 None:intergenic 40.0%
ACATGGCTGCAATATTTCAC+TGG + Chr4:62986960-62986979 MsG0480021691.01.T01:CDS 40.0%
ACTCTTCTTCTCTAATTGGC+TGG - Chr4:62986737-62986756 None:intergenic 40.0%
ATATGAAGATGGCAACAACC+AGG + Chr4:62987124-62987143 MsG0480021691.01.T01:CDS 40.0%
GTCTTTACACTTCTTGCCAA+AGG - Chr4:62986859-62986878 None:intergenic 40.0%
TCAACTTGGAGAGATTTCCA+TGG + Chr4:62986509-62986528 MsG0480021691.01.T01:CDS 40.0%
TGTTTCAGCTTGGTCATAAC+TGG - Chr4:62987075-62987094 None:intergenic 40.0%
! CCAAGTTGAAGATGCATCAA+GGG - Chr4:62986498-62986517 None:intergenic 40.0%
! GCCCTTGTTGTACAAAAAGT+AGG + Chr4:62986336-62986355 MsG0480021691.01.T01:CDS 40.0%
! TCCAAGTTGAAGATGCATCA+AGG - Chr4:62986499-62986518 None:intergenic 40.0%
! TTTAAGGCGTAACCTTGAGA+GGG + Chr4:62986983-62987002 MsG0480021691.01.T01:CDS 40.0%
!! AAATGGATTGCTTCGAAGGA+AGG + Chr4:62986771-62986790 MsG0480021691.01.T01:CDS 40.0%
!! GTAGCTTTATAGGCCCTTTA+GGG - Chr4:62986398-62986417 None:intergenic 40.0%
!! TGTCAAATGGATTGCTTCGA+AGG + Chr4:62986767-62986786 MsG0480021691.01.T01:CDS 40.0%
!!! GTCATAACTGGCTTTTGACT+TGG - Chr4:62987063-62987082 None:intergenic 40.0%
CATCATCACCGATCACAAAG+AGG + Chr4:62987037-62987056 MsG0480021691.01.T01:CDS 45.0%
CCCTTGATGCATCTTCAACT+TGG + Chr4:62986495-62986514 MsG0480021691.01.T01:CDS 45.0%
CTGCTTCTTGTGGCAACTAT+TGG + Chr4:62986652-62986671 MsG0480021691.01.T01:CDS 45.0%
CTTCTTGTGGCAACTATTGG+AGG + Chr4:62986655-62986674 MsG0480021691.01.T01:CDS 45.0%
GAGTTAGTAAAGGTTGCAGC+AGG + Chr4:62986906-62986925 MsG0480021691.01.T01:CDS 45.0%
GGTATAGCTTCTGCTTCTTG+TGG + Chr4:62986642-62986661 MsG0480021691.01.T01:CDS 45.0%
TACAGCTTCAGTGAGGTTGA+TGG - Chr4:62986802-62986821 None:intergenic 45.0%
TTCATCACCTGACTGTGCTA+GGG + Chr4:62986539-62986558 MsG0480021691.01.T01:CDS 45.0%
TTTCATCACCTGACTGTGCT+AGG + Chr4:62986538-62986557 MsG0480021691.01.T01:CDS 45.0%
! ACAGCTTCAGTGAGGTTGAT+GGG - Chr4:62986801-62986820 None:intergenic 45.0%
! GGTAAGAGTTGACGCGTTTT+AGG - Chr4:62986716-62986735 None:intergenic 45.0%
! GTTTAAGGCGTAACCTTGAG+AGG + Chr4:62986982-62987001 MsG0480021691.01.T01:CDS 45.0%
! TGACTTGGCCTCTTTGTGAT+CGG - Chr4:62987048-62987067 None:intergenic 45.0%
! TTTTAGGCTCAGAAGCTCCA+AGG - Chr4:62986700-62986719 None:intergenic 45.0%
!! GGTAGCTTTATAGGCCCTTT+AGG - Chr4:62986399-62986418 None:intergenic 45.0%
AGTATCACCGAAGCTAGCGT+TGG - Chr4:62986606-62986625 None:intergenic 50.0%
TCTGTAGATGCACCCTCTCA+AGG - Chr4:62986998-62987017 None:intergenic 50.0%
ATCACCTCCCTAGCACAGTC+AGG - Chr4:62986549-62986568 None:intergenic 55.0%
ATCACCTGACTGTGCTAGGG+AGG + Chr4:62986542-62986561 MsG0480021691.01.T01:CDS 55.0%
! AAGGCCTCCAACGCTAGCTT+CGG + Chr4:62986596-62986615 MsG0480021691.01.T01:CDS 55.0%
! ATCACCGAAGCTAGCGTTGG+AGG - Chr4:62986603-62986622 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr4 gene 62986285 62987205 62986285 ID=MsG0480021691.01;Name=MsG0480021691.01
Chr4 mRNA 62986285 62987205 62986285 ID=MsG0480021691.01.T01;Parent=MsG0480021691.01;Name=MsG0480021691.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|306
Chr4 exon 62986285 62987205 62986285 ID=MsG0480021691.01.T01:exon:28008;Parent=MsG0480021691.01.T01
Chr4 CDS 62986285 62987205 62986285 ID=MsG0480021691.01.T01:cds;Parent=MsG0480021691.01.T01
Gene Sequence

>MsG0480021691.01.T01

ATGGCTCTAGAAATCATCTACCTGTGTTATCTTTTTTCCTTTGTTCTCTTAGCCCTTGTTGTACAAAAAGTAGGAAAGAAGTTCAAGAAAACAGATTCAACTTATAAGCTCCCTAAAGGGCCTATAAAGCTACCAATTATAGGAAATTTACACAATCTGTTAAGTTCTCAACCACATCAAAAGCTAAGAGATTTGGCTAGAAAATATGGACCCTTGATGCATCTTCAACTTGGAGAGATTTCCATGGTTGTAATTTCATCACCTGACTGTGCTAGGGAGGTGATGAAAACTCATGACATTAACTTTGCAGAAAGGCCTCCAACGCTAGCTTCGGTGATACTTGCTTATAATTCTACAGGTATAGCTTCTGCTTCTTGTGGCAACTATTGGAGGCAGCTAAGAAAAATTTGCACCTTGGAGCTTCTGAGCCTAAAACGCGTCAACTCTTACCAGCCAATTAGAGAAGAAGAGTTCTCTAATCTTGTCAAATGGATTGCTTCGAAGGAAGGATCACCCATCAACCTCACTGAAGCTGTAATTTCTACAATATACACCATCGTTTCAAAATCTGCCTTTGGCAAGAAGTGTAAAGACCAAGACAAATTTATATCAGCAGTAAAAGAGTTAGTAAAGGTTGCAGCAGGATTTGACTTAGCAGATTTGTTTCCTTCTATTACATGGCTGCAATATTTCACTGGTTTAAGGCGTAACCTTGAGAGGGTGCATCTACAGATTGATCAGATAATGGAAAACATCATCACCGATCACAAAGAGGCCAAGTCAAAAGCCAGTTATGACCAAGCTGAAACAGATAAAGATCTGGTAGATGTTCTCATAAGATATGAAGATGGCAACAACCAGGAATTTTTCTTGACTAAAGACAATATCAAGGCCATAATCTTGGTAAGAATAATAACCTAA

Protein sequence

>MsG0480021691.01.T01

MALEIIYLCYLFSFVLLALVVQKVGKKFKKTDSTYKLPKGPIKLPIIGNLHNLLSSQPHQKLRDLARKYGPLMHLQLGEISMVVISSPDCAREVMKTHDINFAERPPTLASVILAYNSTGIASASCGNYWRQLRKICTLELLSLKRVNSYQPIREEEFSNLVKWIASKEGSPINLTEAVISTIYTIVSKSAFGKKCKDQDKFISAVKELVKVAAGFDLADLFPSITWLQYFTGLRRNLERVHLQIDQIMENIITDHKEAKSKASYDQAETDKDLVDVLIRYEDGNNQEFFLTKDNIKAIILVRIIT*