AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036424.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036424.01.T01 MTR_3g092070 93.583 187 12 0 119 305 167 353 2.23e-124 361
MsG0780036424.01.T01 MTR_3g092080 84.865 185 27 1 119 303 170 353 3.77e-109 321
MsG0780036424.01.T01 MTR_3g092080 84.865 185 27 1 119 303 170 353 4.82e-109 322
MsG0780036424.01.T01 MTR_3g092070 94.079 152 9 0 119 270 167 318 3.05e-100 298
MsG0780036424.01.T01 MTR_8g099065 54.422 147 66 1 119 264 619 765 1.49e-46 168
MsG0780036424.01.T01 MTR_1g088750 50.888 169 76 2 119 280 1024 1192 1.42e-45 165
MsG0780036424.01.T01 MTR_1g088750 50.888 169 76 2 119 280 975 1143 1.51e-45 165
MsG0780036424.01.T01 MTR_1g088730 50.296 169 77 2 119 280 1018 1186 1.51e-44 162
MsG0780036424.01.T01 MTR_5g009840 52.055 146 69 1 119 263 601 746 3.15e-44 161
MsG0780036424.01.T01 MTR_3g089100 54.348 138 62 1 119 255 988 1125 5.18e-41 152
MsG0780036424.01.T01 MTR_3g089100 54.348 138 62 1 119 255 983 1120 5.48e-41 152
MsG0780036424.01.T01 MTR_3g089100 54.348 138 62 1 119 255 1017 1154 5.79e-41 152
MsG0780036424.01.T01 MTR_6g033740 51.389 144 68 2 119 261 585 727 1.51e-40 150
MsG0780036424.01.T01 MTR_1g099470 42.932 191 82 2 119 283 520 709 1.01e-39 148
MsG0780036424.01.T01 MTR_1g099480 42.708 192 82 3 119 283 554 744 1.07e-38 145
MsG0780036424.01.T01 MTR_1g101870 48.611 144 72 2 119 261 591 733 3.29e-36 138
MsG0780036424.01.T01 MTR_1g101870 48.611 144 72 2 119 261 643 785 3.38e-36 138
MsG0780036424.01.T01 MTR_8g099065 63.291 79 28 1 119 196 619 697 1.61e-25 107
MsG0780036424.01.T01 MTR_4g074920 37.278 169 84 3 121 285 757 907 1.62e-25 107
MsG0780036424.01.T01 MTR_7g075520 40.000 145 86 1 119 262 296 440 5.27e-25 104
MsG0780036424.01.T01 MTR_6g023845 34.804 204 116 7 105 296 155 353 3.93e-24 101
MsG0780036424.01.T01 MTR_6g023875 35.519 183 111 5 119 296 466 646 9.29e-24 102
MsG0780036424.01.T01 MTR_6g023855 36.508 189 102 7 119 296 330 511 4.14e-23 99.8
MsG0780036424.01.T01 MTR_5g037350 63.158 76 28 0 11 86 486 561 2.52e-22 97.4
MsG0780036424.01.T01 MTR_4g096870 34.973 183 106 5 119 291 203 382 1.22e-21 94.7
MsG0780036424.01.T01 MTR_1g063380 37.500 144 86 2 117 258 288 429 1.55e-21 95.5
MsG0780036424.01.T01 MTR_1g063380 29.379 177 105 6 101 263 540 710 2.75e-15 76.6
MsG0780036424.01.T01 MTR_1g099480 58.228 79 32 1 119 196 554 632 1.98e-21 95.1
MsG0780036424.01.T01 MTR_1g021865 51.250 80 33 1 18 97 137 210 2.47e-21 90.5
MsG0780036424.01.T01 MTR_7g101870 36.806 144 87 2 117 258 289 430 1.22e-20 92.8
MsG0780036424.01.T01 MTR_7g101870 28.856 201 120 8 101 285 541 734 1.29e-15 77.8
MsG0780036424.01.T01 MTR_4g011810 32.402 179 108 4 119 284 326 504 1.76e-20 92.0
MsG0780036424.01.T01 MTR_2g095320 36.806 144 87 2 117 258 232 373 2.65e-20 91.7
MsG0780036424.01.T01 MTR_2g095320 25.907 193 105 5 119 290 506 681 7.68e-12 66.2
MsG0780036424.01.T01 MTR_2g086160 37.063 143 85 4 119 258 216 356 1.12e-19 89.4
MsG0780036424.01.T01 MTR_3g117230 35.252 139 87 2 122 257 227 365 5.29e-19 87.0
MsG0780036424.01.T01 MTR_3g112260 35.252 139 87 2 122 257 224 362 8.87e-19 86.3
MsG0780036424.01.T01 MTR_2g086160 38.760 129 74 4 119 244 216 342 1.06e-18 85.5
MsG0780036424.01.T01 MTR_2g007010 35.526 152 93 3 122 269 325 475 1.17e-18 87.0
MsG0780036424.01.T01 MTR_2g007010 28.571 175 110 5 90 260 593 756 6.02e-13 69.7
MsG0780036424.01.T01 MTR_4g053350 37.500 144 83 5 119 258 211 351 7.40e-18 84.0
MsG0780036424.01.T01 MTR_4g053350 37.500 144 83 5 119 258 211 351 7.84e-18 84.0
MsG0780036424.01.T01 MTR_6g086840 63.333 60 22 0 33 92 9 68 7.93e-18 78.6
MsG0780036424.01.T01 MTR_2g078630 34.503 171 100 5 122 282 159 327 3.52e-17 82.8
MsG0780036424.01.T01 MTR_2g078630 34.503 171 100 5 122 282 687 855 4.69e-17 82.4
MsG0780036424.01.T01 MTR_6g023865 30.000 200 113 6 119 296 242 436 9.11e-17 80.9
MsG0780036424.01.T01 MTR_2g013980 62.500 80 30 0 7 86 1110 1189 1.29e-16 80.9
MsG0780036424.01.T01 MTR_6g016600 38.571 140 80 3 122 257 404 541 2.02e-16 80.1
MsG0780036424.01.T01 MTR_1g090220 65.000 60 21 0 12 71 118 177 9.10e-16 74.3
MsG0780036424.01.T01 MTR_2g095210 29.255 188 113 6 101 274 468 649 1.12e-15 77.8
MsG0780036424.01.T01 MTR_8g023550 32.335 167 99 5 102 257 213 376 1.54e-15 77.0
MsG0780036424.01.T01 MTR_7g089040 32.877 146 90 4 118 258 769 911 3.23e-15 76.6
MsG0780036424.01.T01 MTR_7g089040 31.285 179 95 7 118 278 468 636 4.74e-14 73.2
MsG0780036424.01.T01 MTR_2g024440 31.053 190 119 6 119 305 307 487 3.87e-15 75.9
MsG0780036424.01.T01 MTR_7g096060 34.641 153 84 5 116 257 321 468 4.12e-15 76.3
MsG0780036424.01.T01 MTR_7g010800 34.014 147 90 3 116 257 287 431 4.16e-15 76.3
MsG0780036424.01.T01 MTR_5g075340 30.645 186 118 3 119 302 313 489 4.93e-15 76.3
MsG0780036424.01.T01 MTR_2g024440 31.053 190 119 6 119 305 390 570 5.67e-15 75.5
MsG0780036424.01.T01 MTR_2g024440 31.053 190 119 6 119 305 389 569 6.27e-15 75.5
MsG0780036424.01.T01 MTR_3g115110 35.032 157 95 3 116 267 330 484 1.91e-14 74.3
MsG0780036424.01.T01 MTR_7g088980 38.400 125 72 4 130 251 117 239 2.27e-14 73.9
MsG0780036424.01.T01 MTR_7g088980 38.400 125 72 4 130 251 117 239 2.72e-14 73.6
MsG0780036424.01.T01 MTR_7g088980 31.288 163 98 4 122 272 374 534 7.28e-13 69.3
MsG0780036424.01.T01 MTR_7g088980 38.400 125 72 4 130 251 143 265 2.77e-14 73.6
MsG0780036424.01.T01 MTR_7g088980 38.400 125 72 4 130 251 49 171 3.32e-14 73.2
MsG0780036424.01.T01 MTR_7g088980 31.288 163 98 4 122 272 306 466 9.16e-13 68.9
MsG0780036424.01.T01 MTR_7g088850 34.694 147 89 5 115 257 98 241 3.39e-14 73.2
MsG0780036424.01.T01 MTR_7g088850 33.333 150 93 3 122 266 370 517 2.95e-12 67.4
MsG0780036424.01.T01 MTR_7g088980 38.400 125 72 4 130 251 143 265 3.75e-14 73.2
MsG0780036424.01.T01 MTR_7g088980 31.288 163 98 4 122 272 400 560 9.04e-13 68.9
MsG0780036424.01.T01 MTR_3g467660 48.837 86 42 1 7 92 2 85 4.76e-14 72.0
MsG0780036424.01.T01 MTR_5g024920 53.521 71 31 1 12 82 19 87 1.20e-13 71.6
MsG0780036424.01.T01 MTR_3g023900 31.847 157 97 5 122 269 323 478 1.76e-13 71.2
MsG0780036424.01.T01 MTR_4g094270 35.374 147 85 4 119 258 241 384 1.98e-13 70.9
MsG0780036424.01.T01 MTR_7g088830 30.573 157 101 4 118 271 475 626 3.00e-13 70.9
MsG0780036424.01.T01 MTR_7g088830 31.724 145 91 4 119 258 743 884 4.49e-13 70.1
MsG0780036424.01.T01 MTR_3g104480 30.851 188 118 4 122 307 309 486 3.60e-13 70.5
MsG0780036424.01.T01 MTR_1g028390 30.049 203 106 7 119 307 413 593 5.68e-13 69.7
MsG0780036424.01.T01 MTR_7g088980 31.288 163 98 4 122 272 224 384 6.29e-13 69.3
MsG0780036424.01.T01 MTR_4g094662 32.895 152 85 5 116 257 310 454 8.29e-13 69.3
MsG0780036424.01.T01 MTR_1g095660 35.659 129 74 4 135 257 225 350 1.20e-12 68.2
MsG0780036424.01.T01 MTR_3g096000 33.540 161 84 7 116 260 377 530 9.94e-12 66.2
MsG0780036424.01.T01 MTR_3g099230 70.732 41 11 1 58 97 26 66 1.73e-11 59.3
MsG0780036424.01.T01 MTR_0376s0020 30.000 160 101 5 106 257 72 228 2.12e-11 64.7
MsG0780036424.01.T01 MTR_7g089290 28.571 154 102 6 122 268 754 906 8.32e-11 63.2
MsG0780036424.01.T01 MTR_7g089290 28.571 154 102 6 122 268 726 878 8.79e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036424.01.T01 AT4G27680 72.917 192 51 1 119 309 167 358 7.60e-96 289
MsG0780036424.01.T01 AT5G53540 71.123 187 54 0 119 305 170 356 1.35e-92 281
MsG0780036424.01.T01 AT1G64110 45.226 199 82 3 119 295 598 791 2.60e-46 167
MsG0780036424.01.T01 AT1G64110 45.226 199 82 3 119 295 601 794 2.74e-46 167
MsG0780036424.01.T01 AT1G64110 45.226 199 82 3 119 295 601 794 2.74e-46 167
MsG0780036424.01.T01 AT1G64110 45.226 199 82 3 119 295 603 796 2.90e-46 167
MsG0780036424.01.T01 AT1G64110 45.226 199 82 3 119 295 603 796 2.90e-46 167
MsG0780036424.01.T01 AT1G02890 54.730 148 66 1 119 265 1027 1174 1.53e-45 165
MsG0780036424.01.T01 AT4G02480 55.245 143 63 1 119 260 1046 1188 2.93e-44 162
MsG0780036424.01.T01 AT4G24860 52.439 164 72 2 119 276 876 1039 3.79e-44 161
MsG0780036424.01.T01 AT4G24860 50.867 173 79 2 119 285 899 1071 4.71e-44 161
MsG0780036424.01.T01 AT4G24860 52.439 164 72 2 119 276 903 1066 6.10e-44 160
MsG0780036424.01.T01 AT4G24860 52.439 164 72 2 119 276 901 1064 6.22e-44 160
MsG0780036424.01.T01 AT4G28000 46.561 189 92 3 119 306 602 782 4.39e-43 158
MsG0780036424.01.T01 AT4G28000 46.561 189 92 3 119 306 602 782 5.52e-43 157
MsG0780036424.01.T01 AT4G28000 46.561 189 92 3 119 306 600 780 5.60e-43 157
MsG0780036424.01.T01 AT5G52882 51.656 151 71 2 119 268 599 748 5.75e-43 157
MsG0780036424.01.T01 AT1G50140 44.767 172 94 1 121 291 777 948 5.98e-41 152
MsG0780036424.01.T01 AT1G50140 44.767 172 94 1 121 291 777 948 5.98e-41 152
MsG0780036424.01.T01 AT1G50140 44.767 172 94 1 121 291 799 970 6.71e-41 152
MsG0780036424.01.T01 AT1G50140 44.767 172 94 1 121 291 799 970 6.71e-41 152
MsG0780036424.01.T01 AT1G50140 44.767 172 94 1 121 291 799 970 6.71e-41 152
MsG0780036424.01.T01 AT3G19740 46.951 164 83 2 121 280 789 952 1.18e-39 148
MsG0780036424.01.T01 AT1G62130 50.000 146 66 1 119 264 825 963 1.62e-36 139
MsG0780036424.01.T01 AT1G62130 50.000 146 66 1 119 264 832 970 1.77e-36 139
MsG0780036424.01.T01 AT1G02890 51.938 129 61 1 138 265 1018 1146 1.60e-35 136
MsG0780036424.01.T01 AT2G45500 39.041 146 86 2 119 262 164 308 1.30e-26 107
MsG0780036424.01.T01 AT2G45500 39.041 146 86 2 119 262 164 308 1.30e-26 107
MsG0780036424.01.T01 AT2G45500 39.041 146 86 2 119 262 297 441 6.16e-26 107
MsG0780036424.01.T01 AT2G45500 39.041 146 86 2 119 262 301 445 6.63e-26 107
MsG0780036424.01.T01 AT2G45500 39.041 146 86 2 119 262 307 451 8.20e-26 107
MsG0780036424.01.T01 AT3G27120 39.310 145 84 3 119 260 484 627 1.04e-23 101
MsG0780036424.01.T01 AT5G03340 36.806 144 87 2 117 258 287 428 6.38e-21 93.6
MsG0780036424.01.T01 AT5G03340 27.064 218 136 8 101 301 539 750 3.78e-16 79.3
MsG0780036424.01.T01 AT3G09840 36.806 144 87 2 117 258 287 428 6.75e-21 93.6
MsG0780036424.01.T01 AT3G09840 24.299 214 147 6 101 301 539 750 7.50e-15 75.5
MsG0780036424.01.T01 AT2G34560 33.516 182 111 4 119 291 184 364 7.74e-21 92.0
MsG0780036424.01.T01 AT2G34560 33.516 182 111 4 119 291 193 373 1.04e-20 92.0
MsG0780036424.01.T01 AT5G43010 36.691 139 85 2 122 257 224 362 1.94e-20 91.3
MsG0780036424.01.T01 AT1G45000 36.691 139 85 2 122 257 224 362 2.36e-20 90.9
MsG0780036424.01.T01 AT3G53230 36.111 144 88 2 117 258 288 429 3.64e-20 91.3
MsG0780036424.01.T01 AT3G53230 28.571 182 110 6 101 268 540 715 2.94e-14 73.9
MsG0780036424.01.T01 AT1G80350 28.571 231 134 7 84 284 269 498 3.80e-19 88.2
MsG0780036424.01.T01 AT2G27600 36.364 143 86 4 119 258 213 353 1.91e-18 85.5
MsG0780036424.01.T01 AT3G56690 32.143 168 105 4 118 282 465 626 5.77e-18 85.1
MsG0780036424.01.T01 AT3G56690 36.184 152 89 4 118 264 805 953 7.91e-18 84.7
MsG0780036424.01.T01 AT3G01610 32.026 153 98 3 118 267 609 758 5.69e-17 82.0
MsG0780036424.01.T01 AT3G01610 35.000 160 93 4 122 271 318 476 1.62e-16 80.5
MsG0780036424.01.T01 AT3G01610 32.026 153 98 3 118 267 609 758 5.87e-17 82.0
MsG0780036424.01.T01 AT3G01610 35.000 160 93 4 122 271 318 476 1.64e-16 80.5
MsG0780036424.01.T01 AT2G03670 37.226 137 82 3 118 251 107 242 3.96e-16 79.0
MsG0780036424.01.T01 AT2G03670 37.226 137 82 3 118 251 107 242 6.39e-16 78.6
MsG0780036424.01.T01 AT2G03670 32.168 143 89 4 122 258 371 511 1.20e-11 65.9
MsG0780036424.01.T01 AT5G15250 35.862 145 78 4 122 257 308 446 1.47e-15 77.8
MsG0780036424.01.T01 AT1G53750 32.335 167 99 5 102 257 228 391 1.72e-15 77.0
MsG0780036424.01.T01 AT5G08470 30.583 206 125 4 118 309 916 1117 2.31e-15 77.4
MsG0780036424.01.T01 AT5G08470 30.583 206 125 4 118 309 925 1126 2.36e-15 77.0
MsG0780036424.01.T01 AT3G02450 35.000 140 85 3 122 257 418 555 5.24e-15 75.9
MsG0780036424.01.T01 AT5G42270 34.591 159 97 3 116 269 328 484 1.29e-14 74.7
MsG0780036424.01.T01 AT1G50250 34.591 159 97 3 116 269 340 496 2.37e-14 73.9
MsG0780036424.01.T01 AT2G30950 33.333 147 91 3 116 257 305 449 1.15e-13 72.0
MsG0780036424.01.T01 AT2G30950 33.333 147 91 3 116 257 305 449 1.15e-13 72.0
MsG0780036424.01.T01 AT2G30950 33.333 147 91 3 116 257 305 449 1.15e-13 72.0
MsG0780036424.01.T01 AT2G30950 33.333 147 91 3 116 257 309 453 1.27e-13 71.6
MsG0780036424.01.T01 AT1G06430 34.014 147 90 3 116 257 298 442 1.32e-13 71.6
MsG0780036424.01.T01 AT1G06430 34.014 147 90 3 116 257 298 442 1.32e-13 71.6
MsG0780036424.01.T01 AT1G06430 34.014 147 90 3 116 257 298 442 1.32e-13 71.6
MsG0780036424.01.T01 AT5G19990 35.374 147 85 4 119 258 243 386 1.46e-13 71.2
MsG0780036424.01.T01 AT5G19990 35.374 147 85 4 119 258 243 386 1.46e-13 71.2
MsG0780036424.01.T01 AT1G53780 31.928 166 99 5 102 256 400 562 1.66e-13 71.2
MsG0780036424.01.T01 AT1G53780 31.928 166 99 5 102 256 400 562 1.66e-13 71.2
MsG0780036424.01.T01 AT1G53780 31.928 166 99 5 102 256 421 583 1.77e-13 71.2
MsG0780036424.01.T01 AT1G53780 31.928 166 99 5 102 256 399 561 1.77e-13 71.2
MsG0780036424.01.T01 AT5G20000 35.374 147 85 4 119 258 243 386 1.91e-13 70.9
MsG0780036424.01.T01 AT5G19990 35.374 147 85 4 119 258 185 328 2.61e-13 70.1
MsG0780036424.01.T01 AT5G53170 33.566 143 76 4 119 252 443 575 3.42e-13 70.5
MsG0780036424.01.T01 AT3G15120 31.765 170 105 4 122 282 819 986 4.40e-13 70.5
MsG0780036424.01.T01 AT3G15120 31.765 170 105 4 122 282 809 976 4.87e-13 70.5
MsG0780036424.01.T01 AT1G79560 29.870 154 94 5 116 258 570 720 1.12e-12 68.9
MsG0780036424.01.T01 AT1G79560 29.870 154 94 5 116 258 570 720 1.29e-12 68.9
MsG0780036424.01.T01 AT1G79560 29.870 154 94 5 116 258 570 720 1.42e-12 68.9
MsG0780036424.01.T01 AT4G04180 31.977 172 100 6 119 283 409 570 1.12e-11 65.9
MsG0780036424.01.T01 AT4G04180 31.977 172 100 6 119 283 404 565 1.17e-11 65.9
MsG0780036424.01.T01 AT1G09100 30.952 168 100 7 102 257 230 393 4.78e-11 63.5
MsG0780036424.01.T01 AT1G03000 27.564 156 106 5 122 271 742 896 5.47e-11 63.9

Find 99 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGTCTTCCTCTGCCTTT+AGG 0.150162 7:+7958357 None:intergenic
CAAGGAATTATCTAAGATTA+TGG 0.220598 7:-7956442 MsG0780036424.01.T01:three_prime_UTR
ATATATCAGCCCTTTCTTTC+CGG 0.221308 7:+7957088 None:intergenic
TATATTGAAGGTTATCTTAA+AGG 0.231299 7:-7957070 MsG0780036424.01.T01:CDS
TTGGTCTTCCTCTGCCTTTA+GGG 0.248910 7:+7958358 None:intergenic
ACCTTTGTCGCAGGCAGATT+TGG 0.261206 7:-7956575 MsG0780036424.01.T01:CDS
AATGCAGTATTATCTGTTTC+AGG 0.268820 7:-7956107 MsG0780036424.01.T01:three_prime_UTR
TTCAGCTTGGTTCTCTGTTT+AGG 0.292920 7:-7957526 MsG0780036424.01.T01:intron
AAGTAATTGCGGTTGCAATC+TGG 0.312458 7:+7956348 None:intergenic
TTATGCAGTATTTCTCTAAT+AGG 0.315812 7:+7956943 None:intergenic
AAACTGAGTTCATGGCTCTA+TGG 0.320401 7:-7957357 MsG0780036424.01.T01:CDS
GAAACTATTAAGATTGATCT+AGG 0.328832 7:-7958321 MsG0780036424.01.T01:CDS
TACTTCATCGATGAATATAA+TGG 0.362913 7:+7957435 None:intergenic
GTGTATAATAATACAAGTTT+AGG 0.365607 7:+7956312 None:intergenic
TGGTATATGATAGAACATTA+TGG 0.375339 7:-7958275 MsG0780036424.01.T01:CDS
ACAGATGAAAACTGAGTTCA+TGG 0.378756 7:-7957365 MsG0780036424.01.T01:CDS
TGTAGAGAGTGCTCGGGTTA+TGG 0.397237 7:-7957196 MsG0780036424.01.T01:intron
TTTAATCCTGAGCATCTACT+TGG 0.407390 7:+7956406 None:intergenic
ATATTGAAGGTTATCTTAAA+GGG 0.410430 7:-7957069 MsG0780036424.01.T01:CDS
AAGGAATTATCTAAGATTAT+GGG 0.423093 7:-7956441 MsG0780036424.01.T01:three_prime_UTR
AGATTGCAACCGCAATTACT+TGG 0.424329 7:-7956346 MsG0780036424.01.T01:three_prime_UTR
TAATGAGTTAGATAGAAATA+TGG 0.428014 7:-7958295 MsG0780036424.01.T01:CDS
AGTAATTGCGGTTGCAATCT+GGG 0.431409 7:+7956349 None:intergenic
TTTGGGTCAGCGTCGTTCAT+CGG 0.441745 7:-7957404 MsG0780036424.01.T01:CDS
TTTCCTCATGCCTTTGAAGT+TGG 0.448095 7:-7957120 MsG0780036424.01.T01:CDS
GTACTCATAGTAGGAGAGTT+GGG 0.468610 7:-7958497 MsG0780036424.01.T01:CDS
TCAAGTTGAAGCTTCAATCA+AGG 0.470012 7:-7956460 MsG0780036424.01.T01:three_prime_UTR
CATGGTACAATATCAAAAGT+AGG 0.470098 7:+7956155 None:intergenic
CCAAGCTTTATCACAGTATG+TGG 0.472122 7:+7958227 None:intergenic
TACTGCATAATGAGAAGAAA+GGG 0.472605 7:-7956930 MsG0780036424.01.T01:CDS
GAATTCCACACCGGAAAGAA+AGG 0.474701 7:-7957098 MsG0780036424.01.T01:CDS
TCACATCCAAGTAGATGCTC+AGG 0.475230 7:-7956412 MsG0780036424.01.T01:three_prime_UTR
TCTATTTGATCTTTGCAAGA+AGG 0.478539 7:-7956977 MsG0780036424.01.T01:CDS
TCCAAATCTGCCTGCGACAA+AGG 0.478965 7:+7956574 None:intergenic
AGTGGCTGCCGTATTTAGCT+TGG 0.481021 7:-7957476 MsG0780036424.01.T01:CDS
GTTGTTGTGTAGAGAGTGCT+CGG 0.484415 7:-7957203 MsG0780036424.01.T01:intron
ATGTCTTCCGTGAAGTAGAA+AGG 0.485911 7:+7956545 None:intergenic
TGCATGAAATTCTGAGCAAA+AGG 0.486605 7:+7956266 None:intergenic
CTTTATTTATGATTACTGTT+CGG 0.489046 7:-7956203 MsG0780036424.01.T01:three_prime_UTR
ATAGATTTCAGTTACATAGC+TGG 0.489383 7:-7957027 MsG0780036424.01.T01:CDS
GCTTGGGTGGTACTCATAGT+AGG 0.491991 7:-7958506 MsG0780036424.01.T01:CDS
TAGAAAAGAGGGTGGAAACT+AGG 0.492885 7:-7958461 MsG0780036424.01.T01:CDS
TCTGCCTGCGACAAAGGTCT+AGG 0.503149 7:+7956580 None:intergenic
ATACTGCATAATGAGAAGAA+AGG 0.503244 7:-7956931 MsG0780036424.01.T01:CDS
ATGGTACAATATCAAAAGTA+GGG 0.510191 7:+7956156 None:intergenic
TTTGTCGCAGGCAGATTTGG+AGG 0.513638 7:-7956572 MsG0780036424.01.T01:CDS
TACATAGCTGGTTTATGCAA+GGG 0.514055 7:-7957015 MsG0780036424.01.T01:CDS
AACTGAGTTCATGGCTCTAT+GGG 0.515199 7:-7957356 MsG0780036424.01.T01:CDS
AGGAATTATCTAAGATTATG+GGG 0.530906 7:-7956440 MsG0780036424.01.T01:three_prime_UTR
TTCTGAGCAAAAGGCAACAC+TGG 0.532400 7:+7956275 None:intergenic
TTTATGAGCCAAGCTAAATA+CGG 0.532998 7:+7957468 None:intergenic
AGGAGGCCCTTTCTACTTCA+CGG 0.535047 7:-7956552 MsG0780036424.01.T01:CDS
AGAAAGGGCTGATATATTGA+AGG 0.537278 7:-7957082 MsG0780036424.01.T01:CDS
AATTTGACTGCATCATATCA+TGG 0.539356 7:+7956137 None:intergenic
GATTTGATGATTATGTAGCA+AGG 0.539455 7:-7958410 MsG0780036424.01.T01:CDS
GGTTTATGCAAGGGTTACAC+TGG 0.540877 7:-7957006 MsG0780036424.01.T01:CDS
AGAGGGTGGAAACTAGGCTT+AGG 0.542788 7:-7958455 MsG0780036424.01.T01:CDS
TTACATAGCTGGTTTATGCA+AGG 0.545650 7:-7957016 MsG0780036424.01.T01:CDS
GTCGCAGGCAGATTTGGAGG+AGG 0.548812 7:-7956569 MsG0780036424.01.T01:CDS
AGCAAGGAGATTAGATCAGA+GGG 0.550156 7:-7958394 MsG0780036424.01.T01:CDS
AGAGATAAGGATGTTGTGCT+TGG 0.552707 7:-7958523 None:intergenic
TGTCTTCCGTGAAGTAGAAA+GGG 0.552801 7:+7956546 None:intergenic
CCACATACTGTGATAAAGCT+TGG 0.555008 7:-7958227 MsG0780036424.01.T01:intron
TAAATAAAGTCTAGTATACA+TGG 0.557154 7:+7956217 None:intergenic
TAGCACTCGCAGTAGAAAAG+AGG 0.562578 7:-7958473 MsG0780036424.01.T01:CDS
ATTGCTTCATCAAGTTCTGA+AGG 0.564553 7:+7957153 None:intergenic
GGTTATCTTAAAGGGCGAGA+AGG 0.568954 7:-7957061 MsG0780036424.01.T01:CDS
GGTACTCATAGTAGGAGAGT+TGG 0.569315 7:-7958498 MsG0780036424.01.T01:CDS
TAGCAAGGAGATTAGATCAG+AGG 0.571039 7:-7958395 MsG0780036424.01.T01:CDS
GAGTTCATGGCTCTATGGGA+TGG 0.573516 7:-7957352 MsG0780036424.01.T01:CDS
AATTCCACACCGGAAAGAAA+GGG 0.575301 7:-7957097 MsG0780036424.01.T01:CDS
AAACTATTAAGATTGATCTA+GGG 0.575532 7:-7958320 MsG0780036424.01.T01:CDS
TCAGCCCTTTCTTTCCGGTG+TGG 0.577957 7:+7957093 None:intergenic
GTGTGGAATTCCAACTTCAA+AGG 0.578580 7:+7957110 None:intergenic
AATCACATCCCTAAAGGCAG+AGG 0.579009 7:-7958366 MsG0780036424.01.T01:CDS
GGGTGGAAACTAGGCTTAGG+TGG 0.589809 7:-7958452 MsG0780036424.01.T01:CDS
TCATCGATGAATATAATGGA+TGG 0.591454 7:+7957439 None:intergenic
GGAACCTAGACCTTTGTCGC+AGG 0.591455 7:-7956584 MsG0780036424.01.T01:CDS
GAGATAAGGATGTTGTGCTT+GGG 0.591718 7:-7958522 None:intergenic
TTTATCACAGTATGTGGGGT+CGG 0.597784 7:+7958233 None:intergenic
GAGGATAATCACATCCCTAA+AGG 0.600914 7:-7958372 MsG0780036424.01.T01:CDS
CAAGCTTTATCACAGTATGT+GGG 0.602787 7:+7958228 None:intergenic
CTAGAATAACCAAGTAATTG+CGG 0.603422 7:+7956337 None:intergenic
GCGTCGTTCATCGGATCATG+AGG 0.618033 7:-7957395 MsG0780036424.01.T01:CDS
TTCTACTTCACGGAAGACAT+CGG 0.618730 7:-7956542 MsG0780036424.01.T01:CDS
TTGCTTCATCAAGTTCTGAA+GGG 0.630399 7:+7957154 None:intergenic
GGAATTATCTAAGATTATGG+GGG 0.631503 7:-7956439 MsG0780036424.01.T01:three_prime_UTR
TTGAAGTTGGAATTCCACAC+CGG 0.634504 7:-7957107 MsG0780036424.01.T01:CDS
AACTTGATGAAGCAATACTT+CGG 0.636206 7:-7957146 MsG0780036424.01.T01:CDS
AGCACTCGCAGTAGAAAAGA+GGG 0.642402 7:-7958472 MsG0780036424.01.T01:CDS
ATAAGGATGTTGTGCTTGGG+TGG 0.655782 7:-7958519 None:intergenic
TACTCATAGTAGGAGAGTTG+GGG 0.658166 7:-7958496 MsG0780036424.01.T01:CDS
ATTCCAACTTCAAAGGCATG+AGG 0.664065 7:+7957117 None:intergenic
TTGTTGTGTAGAGAGTGCTC+GGG 0.671596 7:-7957202 MsG0780036424.01.T01:intron
ACTGCATAATGAGAAGAAAG+GGG 0.674597 7:-7956929 MsG0780036424.01.T01:CDS
AAGGAGATTAGATCAGAGGG+AGG 0.674815 7:-7958391 MsG0780036424.01.T01:CDS
AAGCTTTATCACAGTATGTG+GGG 0.675517 7:+7958229 None:intergenic
GTACAATATCAAAAGTAGGG+CGG 0.723420 7:+7956159 None:intergenic
ACTCGCAGTAGAAAAGAGGG+TGG 0.726818 7:-7958469 MsG0780036424.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAACTTATATTGTATAAT+CGG + Chr7:7957025-7957044 None:intergenic 15.0%
!! ACGTGAAAAATAAATAAAAT+AGG + Chr7:7958011-7958030 None:intergenic 15.0%
!! ATGTTAAACAAAAAAAGAAA+AGG + Chr7:7956671-7956690 None:intergenic 15.0%
!! TATTAAAGAAAAAGATCAAA+CGG + Chr7:7956885-7956904 None:intergenic 15.0%
!! TGTTAAACAAAAAAAGAAAA+GGG + Chr7:7956670-7956689 None:intergenic 15.0%
!!! AATCTTTATTTTTGAATGTA+CGG - Chr7:7956445-7956464 MsG0780036424.01.T01:three_prime_UTR 15.0%
!! AAACTATTAAGATTGATCTA+GGG - Chr7:7956299-7956318 MsG0780036424.01.T01:three_prime_UTR 20.0%
!! AATCAGACAAATATAACTTT+GGG + Chr7:7957877-7957896 None:intergenic 20.0%
!! AATGAAAAATATACTAACAC+AGG + Chr7:7957722-7957741 None:intergenic 20.0%
!! ATATTGAAGGTTATCTTAAA+GGG - Chr7:7957550-7957569 MsG0780036424.01.T01:intron 20.0%
!! CTTGGAAAATTCAAAAAATA+TGG + Chr7:7957765-7957784 None:intergenic 20.0%
!! GTGTATAATAATACAAGTTT+AGG + Chr7:7958310-7958329 None:intergenic 20.0%
!! TAAATAAAGTCTAGTATACA+TGG + Chr7:7958405-7958424 None:intergenic 20.0%
!! TAATCAGACAAATATAACTT+TGG + Chr7:7957878-7957897 None:intergenic 20.0%
!! TAATGAGTTAGATAGAAATA+TGG - Chr7:7956324-7956343 MsG0780036424.01.T01:three_prime_UTR 20.0%
!! TATATTGAAGGTTATCTTAA+AGG - Chr7:7957549-7957568 MsG0780036424.01.T01:intron 20.0%
!! TATGTTTCATTTATCAAATC+CGG - Chr7:7956998-7957017 MsG0780036424.01.T01:CDS 20.0%
!! TTGATAAATGAAACATAGTT+AGG + Chr7:7956995-7957014 None:intergenic 20.0%
!! TTTCTTTAATATTGTAACTG+TGG - Chr7:7956894-7956913 MsG0780036424.01.T01:intron 20.0%
!!! AAGGAATTATCTAAGATTAT+GGG - Chr7:7958178-7958197 MsG0780036424.01.T01:intron 20.0%
!!! AATAACATATTTTCACTTCT+TGG + Chr7:7957783-7957802 None:intergenic 20.0%
!!! CTTTATTTATGATTACTGTT+CGG - Chr7:7958416-7958435 MsG0780036424.01.T01:CDS 20.0%
!!! GTTTCTCTTATAGTTTTTAT+TGG + Chr7:7956283-7956302 None:intergenic 20.0%
!!! TGTGTAAATTTTCAAAACAA+GGG - Chr7:7957342-7957361 MsG0780036424.01.T01:CDS 20.0%
!!! TTATTTATTTTTCACGTTTC+AGG - Chr7:7958014-7958033 MsG0780036424.01.T01:intron 20.0%
! AATAGACCCAACATATAATA+AGG - Chr7:7956956-7956975 MsG0780036424.01.T01:CDS 25.0%
! ACTACTTAAAAACTTACGAT+CGG + Chr7:7957301-7957320 None:intergenic 25.0%
! ATAGACCCAACATATAATAA+GGG - Chr7:7956957-7956976 MsG0780036424.01.T01:CDS 25.0%
! ATGGTACAATATCAAAAGTA+GGG + Chr7:7958466-7958485 None:intergenic 25.0%
! GAAACTATTAAGATTGATCT+AGG - Chr7:7956298-7956317 MsG0780036424.01.T01:three_prime_UTR 25.0%
! GAACAGAAAAATATTAGTGA+TGG + Chr7:7957120-7957139 None:intergenic 25.0%
! GTAGGAATATTAAGAGAATA+TGG - Chr7:7956780-7956799 MsG0780036424.01.T01:intron 25.0%
! TAATCAATAATCCAATCTCA+AGG + Chr7:7956483-7956502 None:intergenic 25.0%
! TACTTCATCGATGAATATAA+TGG + Chr7:7957187-7957206 None:intergenic 25.0%
! TGGTATATGATAGAACATTA+TGG - Chr7:7956344-7956363 MsG0780036424.01.T01:three_prime_UTR 25.0%
! TTATGCAGTATTTCTCTAAT+AGG + Chr7:7957679-7957698 None:intergenic 25.0%
!! AGGAATTATCTAAGATTATG+GGG - Chr7:7958179-7958198 MsG0780036424.01.T01:intron 25.0%
!! CAAGGAATTATCTAAGATTA+TGG - Chr7:7958177-7958196 MsG0780036424.01.T01:intron 25.0%
!! CTGTGTAAATTTTCAAAACA+AGG - Chr7:7957341-7957360 MsG0780036424.01.T01:CDS 25.0%
!! GGATTATTGATTACCTTAAA+AGG - Chr7:7956490-7956509 MsG0780036424.01.T01:CDS 25.0%
!!! AGTTGCTTTTTTCATATCAT+GGG - Chr7:7957963-7957982 MsG0780036424.01.T01:intron 25.0%
!!! TAGTTGCTTTTTTCATATCA+TGG - Chr7:7957962-7957981 MsG0780036424.01.T01:intron 25.0%
AACTTGATGAAGCAATACTT+CGG - Chr7:7957473-7957492 MsG0780036424.01.T01:CDS 30.0%
AATGCAGTATTATCTGTTTC+AGG - Chr7:7958512-7958531 MsG0780036424.01.T01:CDS 30.0%
AATTTGACTGCATCATATCA+TGG + Chr7:7958485-7958504 None:intergenic 30.0%
AGAGGTTTACAAGCATAAAT+AGG + Chr7:7956599-7956618 None:intergenic 30.0%
ATACTGCATAATGAGAAGAA+AGG - Chr7:7957688-7957707 MsG0780036424.01.T01:intron 30.0%
ATAGATTTCAGTTACATAGC+TGG - Chr7:7957592-7957611 MsG0780036424.01.T01:intron 30.0%
ATTATGATGTACGTTACTGT+AGG - Chr7:7956762-7956781 MsG0780036424.01.T01:intron 30.0%
CATGGTACAATATCAAAAGT+AGG + Chr7:7958467-7958486 None:intergenic 30.0%
CTAGAATAACCAAGTAATTG+CGG + Chr7:7958285-7958304 None:intergenic 30.0%
CTTATATTGTATAATCGGTC+CGG + Chr7:7957020-7957039 None:intergenic 30.0%
TACTGCATAATGAGAAGAAA+GGG - Chr7:7957689-7957708 MsG0780036424.01.T01:intron 30.0%
TCTATTTGATCTTTGCAAGA+AGG - Chr7:7957642-7957661 MsG0780036424.01.T01:intron 30.0%
TCTCTTAATGTTAGGTTTGT+TGG + Chr7:7956630-7956649 None:intergenic 30.0%
TTCTACTATATCCTTTGCTT+TGG + Chr7:7956858-7956877 None:intergenic 30.0%
TTCTTCAAATTCCATTTGCT+TGG - Chr7:7956812-7956831 MsG0780036424.01.T01:intron 30.0%
TTTATGAGCCAAGCTAAATA+CGG + Chr7:7957154-7957173 None:intergenic 30.0%
! AAACTAATTTGCCTTGAGAT+TGG - Chr7:7956469-7956488 MsG0780036424.01.T01:exon 30.0%
! AATATTTTTCTGTTCTGCAG+TGG - Chr7:7957125-7957144 MsG0780036424.01.T01:CDS 30.0%
! GATTTGATGATTATGTAGCA+AGG - Chr7:7956209-7956228 MsG0780036424.01.T01:three_prime_UTR 30.0%
! GGAATTATCTAAGATTATGG+GGG - Chr7:7958180-7958199 MsG0780036424.01.T01:intron 30.0%
! TCATCGATGAATATAATGGA+TGG + Chr7:7957183-7957202 None:intergenic 30.0%
!! GGTTTGTTGGTTAATTAAAG+AGG + Chr7:7956617-7956636 None:intergenic 30.0%
!!! GATGAAGTAGACAGTTTTTT+GGG - Chr7:7957198-7957217 MsG0780036424.01.T01:intron 30.0%
AACATATAATAAGGGCAACC+TGG - Chr7:7956965-7956984 MsG0780036424.01.T01:CDS 35.0%
ACAAGCATAAATAGGACACA+GGG + Chr7:7956591-7956610 None:intergenic 35.0%
ACAGATGAAAACTGAGTTCA+TGG - Chr7:7957254-7957273 MsG0780036424.01.T01:intron 35.0%
ACTGCATAATGAGAAGAAAG+GGG - Chr7:7957690-7957709 MsG0780036424.01.T01:intron 35.0%
ACTTAAAAACTTACGATCGG+TGG + Chr7:7957298-7957317 None:intergenic 35.0%
AGAAAGGGCTGATATATTGA+AGG - Chr7:7957537-7957556 MsG0780036424.01.T01:intron 35.0%
AGGTTGCCCTTATTATATGT+TGG + Chr7:7956966-7956985 None:intergenic 35.0%
ATATAACTTTGGGTGCATAC+TGG + Chr7:7957867-7957886 None:intergenic 35.0%
ATATATCAGCCCTTTCTTTC+CGG + Chr7:7957534-7957553 None:intergenic 35.0%
ATTGTAACTGTGGCCAATTT+CGG - Chr7:7956904-7956923 MsG0780036424.01.T01:intron 35.0%
GCTGTCATTCTCTTAATGTT+AGG + Chr7:7956638-7956657 None:intergenic 35.0%
GGTTGCCCTTATTATATGTT+GGG + Chr7:7956965-7956984 None:intergenic 35.0%
GTACAATATCAAAAGTAGGG+CGG + Chr7:7958463-7958482 None:intergenic 35.0%
TACAAGCATAAATAGGACAC+AGG + Chr7:7956592-7956611 None:intergenic 35.0%
TGCATGAAATTCTGAGCAAA+AGG + Chr7:7958356-7958375 None:intergenic 35.0%
TTTAATCCTGAGCATCTACT+TGG + Chr7:7958216-7958235 None:intergenic 35.0%
! AAGATCAATTTGTGATGACG+TGG - Chr7:7957930-7957949 MsG0780036424.01.T01:intron 35.0%
! AAGCTTTATCACAGTATGTG+GGG + Chr7:7956393-7956412 None:intergenic 35.0%
! ATTGCTTCATCAAGTTCTGA+AGG + Chr7:7957469-7957488 None:intergenic 35.0%
! CAAGCTTTATCACAGTATGT+GGG + Chr7:7956394-7956413 None:intergenic 35.0%
! TACATAGCTGGTTTATGCAA+GGG - Chr7:7957604-7957623 MsG0780036424.01.T01:intron 35.0%
! TATGTTGGGTCTATTTCTCT+CGG + Chr7:7956951-7956970 None:intergenic 35.0%
! TTACATAGCTGGTTTATGCA+AGG - Chr7:7957603-7957622 MsG0780036424.01.T01:intron 35.0%
!! TCAAGTTGAAGCTTCAATCA+AGG - Chr7:7958159-7958178 MsG0780036424.01.T01:intron 35.0%
!! TTGCTTCATCAAGTTCTGAA+GGG + Chr7:7957468-7957487 None:intergenic 35.0%
!!! CGATGAAGTAGACAGTTTTT+TGG - Chr7:7957197-7957216 MsG0780036424.01.T01:intron 35.0%
!!! TGCTTTTTTCATATCATGGG+CGG - Chr7:7957966-7957985 MsG0780036424.01.T01:intron 35.0%
!!! TTCTGTTGCTTTTTTCAGCT+TGG - Chr7:7957080-7957099 MsG0780036424.01.T01:CDS 35.0%
AAAATCCTGAGGAGAGTCTT+TGG + Chr7:7956516-7956535 None:intergenic 40.0%
AAAGACATCAAAAACGTCGC+GGG - Chr7:7958122-7958141 MsG0780036424.01.T01:intron 40.0%
AAGTAATTGCGGTTGCAATC+TGG + Chr7:7958274-7958293 None:intergenic 40.0%
AATTCCACACCGGAAAGAAA+GGG - Chr7:7957522-7957541 MsG0780036424.01.T01:CDS 40.0%
AGATTGCAACCGCAATTACT+TGG - Chr7:7958273-7958292 MsG0780036424.01.T01:CDS 40.0%
AGCAAGGAGATTAGATCAGA+GGG - Chr7:7956225-7956244 MsG0780036424.01.T01:three_prime_UTR 40.0%
AGTAATTGCGGTTGCAATCT+GGG + Chr7:7958273-7958292 None:intergenic 40.0%
ATGTCTTCCGTGAAGTAGAA+AGG + Chr7:7958077-7958096 None:intergenic 40.0%
CAAGCATAAATAGGACACAG+GGG + Chr7:7956590-7956609 None:intergenic 40.0%
CCACATACTGTGATAAAGCT+TGG - Chr7:7956392-7956411 MsG0780036424.01.T01:three_prime_UTR 40.0%
CTAATGAGCCAAACCGAAAT+TGG + Chr7:7956920-7956939 None:intergenic 40.0%
GAAACATAGTTAGGTATGCC+AGG + Chr7:7956986-7957005 None:intergenic 40.0%
GAAAGACATCAAAAACGTCG+CGG - Chr7:7958121-7958140 MsG0780036424.01.T01:intron 40.0%
GAGGATAATCACATCCCTAA+AGG - Chr7:7956247-7956266 MsG0780036424.01.T01:three_prime_UTR 40.0%
GCAGAACAGAAAAAATCCTG+AGG + Chr7:7956527-7956546 None:intergenic 40.0%
GCTGTGTATTTCCAAAGCAA+AGG - Chr7:7956844-7956863 MsG0780036424.01.T01:intron 40.0%
GTACTCATAGTAGGAGAGTT+GGG - Chr7:7956122-7956141 MsG0780036424.01.T01:three_prime_UTR 40.0%
GTGTGGAATTCCAACTTCAA+AGG + Chr7:7957512-7957531 None:intergenic 40.0%
TACTCATAGTAGGAGAGTTG+GGG - Chr7:7956123-7956142 MsG0780036424.01.T01:three_prime_UTR 40.0%
TAGAAAAGAGGGTGGAAACT+AGG - Chr7:7956158-7956177 MsG0780036424.01.T01:three_prime_UTR 40.0%
TAGCAAGGAGATTAGATCAG+AGG - Chr7:7956224-7956243 MsG0780036424.01.T01:three_prime_UTR 40.0%
TGTCTTCCGTGAAGTAGAAA+GGG + Chr7:7958076-7958095 None:intergenic 40.0%
TTCTACTTCACGGAAGACAT+CGG - Chr7:7958077-7958096 MsG0780036424.01.T01:intron 40.0%
TTGAAGTTGGAATTCCACAC+CGG - Chr7:7957512-7957531 MsG0780036424.01.T01:CDS 40.0%
TTTATCACAGTATGTGGGGT+CGG + Chr7:7956389-7956408 None:intergenic 40.0%
! AAACTGAGTTCATGGCTCTA+TGG - Chr7:7957262-7957281 MsG0780036424.01.T01:intron 40.0%
! AACTGAGTTCATGGCTCTAT+GGG - Chr7:7957263-7957282 MsG0780036424.01.T01:intron 40.0%
! ATTCCAACTTCAAAGGCATG+AGG + Chr7:7957505-7957524 None:intergenic 40.0%
! CCAAGCTTTATCACAGTATG+TGG + Chr7:7956395-7956414 None:intergenic 40.0%
! TTCAGCTTGGTTCTCTGTTT+AGG - Chr7:7957093-7957112 MsG0780036424.01.T01:CDS 40.0%
!! TTGCTTTGGAAATACACAGC+AGG + Chr7:7956844-7956863 None:intergenic 40.0%
!! TTTCCTCATGCCTTTGAAGT+TGG - Chr7:7957499-7957518 MsG0780036424.01.T01:CDS 40.0%
!!! TCCAGCTTTTAGAGCTTTGA+GGG + Chr7:7956720-7956739 None:intergenic 40.0%
!!! TTCCAGCTTTTAGAGCTTTG+AGG + Chr7:7956721-7956740 None:intergenic 40.0%
!!! TTTTTTCATATCATGGGCGG+CGG - Chr7:7957969-7957988 MsG0780036424.01.T01:intron 40.0%
AAATAGGACACAGGGGAAGA+GGG + Chr7:7956583-7956602 None:intergenic 45.0%
AACTGTGGCCAATTTCGGTT+TGG - Chr7:7956909-7956928 MsG0780036424.01.T01:intron 45.0%
AAGACATCAAAAACGTCGCG+GGG - Chr7:7958123-7958142 MsG0780036424.01.T01:intron 45.0%
AAGGAGATTAGATCAGAGGG+AGG - Chr7:7956228-7956247 MsG0780036424.01.T01:three_prime_UTR 45.0%
AATCACATCCCTAAAGGCAG+AGG - Chr7:7956253-7956272 MsG0780036424.01.T01:three_prime_UTR 45.0%
AGCACTCGCAGTAGAAAAGA+GGG - Chr7:7956147-7956166 MsG0780036424.01.T01:three_prime_UTR 45.0%
GAATTCCACACCGGAAAGAA+AGG - Chr7:7957521-7957540 MsG0780036424.01.T01:CDS 45.0%
GGTACTCATAGTAGGAGAGT+TGG - Chr7:7956121-7956140 MsG0780036424.01.T01:three_prime_UTR 45.0%
GGTTATCTTAAAGGGCGAGA+AGG - Chr7:7957558-7957577 MsG0780036424.01.T01:intron 45.0%
GGTTTATGCAAGGGTTACAC+TGG - Chr7:7957613-7957632 MsG0780036424.01.T01:intron 45.0%
TAAATAGGACACAGGGGAAG+AGG + Chr7:7956584-7956603 None:intergenic 45.0%
TAGCACTCGCAGTAGAAAAG+AGG - Chr7:7956146-7956165 MsG0780036424.01.T01:three_prime_UTR 45.0%
TCACATCCAAGTAGATGCTC+AGG - Chr7:7958207-7958226 MsG0780036424.01.T01:intron 45.0%
TTCTGAGCAAAAGGCAACAC+TGG + Chr7:7958347-7958366 None:intergenic 45.0%
! GGTTTGGCTCATTAGCCATT+AGG - Chr7:7956925-7956944 MsG0780036424.01.T01:CDS 45.0%
! GTCTATTTCTCTCGGCCTAA+TGG + Chr7:7956943-7956962 None:intergenic 45.0%
! TTGGTCTTCCTCTGCCTTTA+GGG + Chr7:7956264-7956283 None:intergenic 45.0%
!! ATTGGTCTTCCTCTGCCTTT+AGG + Chr7:7956265-7956284 None:intergenic 45.0%
!! GGAGAGTCTTTGGCCTTTTA+AGG + Chr7:7956506-7956525 None:intergenic 45.0%
!! GTTGTTGTGTAGAGAGTGCT+CGG - Chr7:7957416-7957435 MsG0780036424.01.T01:CDS 45.0%
!! TTGTTGTGTAGAGAGTGCTC+GGG - Chr7:7957417-7957436 MsG0780036424.01.T01:CDS 45.0%
!!! CTTTTAGAGCTTTGAGGGCT+AGG + Chr7:7956715-7956734 None:intergenic 45.0%
!!! TAGGTTGATTTTGAGGTGGC+TGG + Chr7:7956696-7956715 None:intergenic 45.0%
!!! TGAGGGCTAGGTTGATTTTG+AGG + Chr7:7956703-7956722 None:intergenic 45.0%
AAAGGCCAAAGACTCTCCTC+AGG - Chr7:7956508-7956527 MsG0780036424.01.T01:CDS 50.0%
ACCTTTGTCGCAGGCAGATT+TGG - Chr7:7958044-7958063 MsG0780036424.01.T01:intron 50.0%
ACTCGCAGTAGAAAAGAGGG+TGG - Chr7:7956150-7956169 MsG0780036424.01.T01:three_prime_UTR 50.0%
AGAGGGTGGAAACTAGGCTT+AGG - Chr7:7956164-7956183 MsG0780036424.01.T01:three_prime_UTR 50.0%
AGGAGGCCCTTTCTACTTCA+CGG - Chr7:7958067-7958086 MsG0780036424.01.T01:intron 50.0%
AGTGGCTGCCGTATTTAGCT+TGG - Chr7:7957143-7957162 MsG0780036424.01.T01:CDS 50.0%
GCAGGTCAAGACCAAGCAAA+TGG + Chr7:7956826-7956845 None:intergenic 50.0%
GCTTGGGTGGTACTCATAGT+AGG - Chr7:7956113-7956132 MsG0780036424.01.T01:three_prime_UTR 50.0%
TCCAAATCTGCCTGCGACAA+AGG + Chr7:7958048-7958067 None:intergenic 50.0%
TTTGGGTCAGCGTCGTTCAT+CGG - Chr7:7957215-7957234 MsG0780036424.01.T01:intron 50.0%
TTTGTCGCAGGCAGATTTGG+AGG - Chr7:7958047-7958066 MsG0780036424.01.T01:intron 50.0%
! GAGTTCATGGCTCTATGGGA+TGG - Chr7:7957267-7957286 MsG0780036424.01.T01:intron 50.0%
!! GCCCTCAAAGCTCTAAAAGC+TGG - Chr7:7956716-7956735 MsG0780036424.01.T01:intron 50.0%
!! TGTAGAGAGTGCTCGGGTTA+TGG - Chr7:7957423-7957442 MsG0780036424.01.T01:CDS 50.0%
!!! GGGCTAGGTTGATTTTGAGG+TGG + Chr7:7956700-7956719 None:intergenic 50.0%
GCGTCGTTCATCGGATCATG+AGG - Chr7:7957224-7957243 MsG0780036424.01.T01:intron 55.0%
GGAACCTAGACCTTTGTCGC+AGG - Chr7:7958035-7958054 MsG0780036424.01.T01:intron 55.0%
GGGTGGAAACTAGGCTTAGG+TGG - Chr7:7956167-7956186 MsG0780036424.01.T01:three_prime_UTR 55.0%
TCAGCCCTTTCTTTCCGGTG+TGG + Chr7:7957529-7957548 None:intergenic 55.0%
TCTGCCTGCGACAAAGGTCT+AGG + Chr7:7958042-7958061 None:intergenic 55.0%
CAAAAACGTCGCGGGGAGTC+AGG - Chr7:7958130-7958149 MsG0780036424.01.T01:intron 60.0%
GTCGCAGGCAGATTTGGAGG+AGG - Chr7:7958050-7958069 MsG0780036424.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 7956106 7958535 7956106 ID=MsG0780036424.01;Name=MsG0780036424.01
Chr7 mRNA 7956106 7958535 7956106 ID=MsG0780036424.01.T01;Parent=MsG0780036424.01;Name=MsG0780036424.01.T01;_AED=0.49;_eAED=0.63;_QI=0|0.66|0.5|1|1|1|4|380|309
Chr7 exon 7956106 7956605 7956106 ID=MsG0780036424.01.T01:exon:4200;Parent=MsG0780036424.01.T01
Chr7 exon 7956918 7957213 7956918 ID=MsG0780036424.01.T01:exon:4199;Parent=MsG0780036424.01.T01
Chr7 exon 7957338 7957543 7957338 ID=MsG0780036424.01.T01:exon:4198;Parent=MsG0780036424.01.T01
Chr7 exon 7958228 7958535 7958228 ID=MsG0780036424.01.T01:exon:4197;Parent=MsG0780036424.01.T01
Chr7 CDS 7958228 7958535 7958228 ID=MsG0780036424.01.T01:cds;Parent=MsG0780036424.01.T01
Chr7 CDS 7957338 7957543 7957338 ID=MsG0780036424.01.T01:cds;Parent=MsG0780036424.01.T01
Chr7 CDS 7956918 7957213 7956918 ID=MsG0780036424.01.T01:cds;Parent=MsG0780036424.01.T01
Chr7 CDS 7956486 7956605 7956486 ID=MsG0780036424.01.T01:cds;Parent=MsG0780036424.01.T01
Chr7 three_prime_UTR 7956106 7956485 7956106 ID=MsG0780036424.01.T01:three_prime_utr;Parent=MsG0780036424.01.T01
Gene Sequence

>MsG0780036424.01.T01

ATGTTGTGCTTGGGTGGTACTCATAGTAGGAGAGTTGGGGTAGCACTCGCAGTAGAAAAGAGGGTGGAAACTAGGCTTAGGTGGTTTGAGCTTTTAGAGAGAAGATTTGATGATTATGTAGCAAGGAGATTAGATCAGAGGGAGGATAATCACATCCCTAAAGGCAGAGGAAGACCAATAAAAACTATAAGAGAAACTATTAAGATTGATCTAGGGATTAATGAGTTAGATAGAAATATGGTATATGATAGAACATTATGGCGTCGTTTGATTCATGTAGCCGACCCCACATACTGTGATAAAGCTTGCTTGGTTCTCTGTTTAGGTCCATCACTAATATTTTTCTGTTCTGCAGTGGCTGCCGTATTTAGCTTGGCTCATAAACTTCAGCCATCCATTATATTCATCGATGAAGTAGACAGTTTTTTGGGTCAGCGTCGTTCATCGGATCATGAGGCTCTGTTACAGATGAAAACTGAGTTCATGGCTCTATGGGATGGATTAGCCACCGATCAGAGTGCTCGGGTTATGGTACTTGCAGCAACTAATCGCCCTTCAGAACTTGATGAAGCAATACTTCGGCGTTTTCCTCATGCCTTTGAAGTTGGAATTCCACACCGGAAAGAAAGGGCTGATATATTGAAGGTTATCTTAAAGGGCGAGAAGGTTGAAGATAACATAGATTTCAGTTACATAGCTGGTTTATGCAAGGGTTACACTGGTTCAGATCTATTTGATCTTTGCAAGAAGGCTGCATATTTTCCTATTAGAGAAATACTGCATAATGAGAAGAAAGGGGAACAATCCTGTGAACCTAGACCTTTGTCGCAGGCAGATTTGGAGGAGGCCCTTTCTACTTCACGGAAGACATCGGTTGCTGCAAATGAATACAGTAGAAAGACATCAAAAACGTCGCGGGGAGTCAGGTGA

Protein sequence

>MsG0780036424.01.T01

MLCLGGTHSRRVGVALAVEKRVETRLRWFELLERRFDDYVARRLDQREDNHIPKGRGRPIKTIRETIKIDLGINELDRNMVYDRTLWRRLIHVADPTYCDKACLVLCLGPSLIFFCSAVAAVFSLAHKLQPSIIFIDEVDSFLGQRRSSDHEALLQMKTEFMALWDGLATDQSARVMVLAATNRPSELDEAILRRFPHAFEVGIPHRKERADILKVILKGEKVEDNIDFSYIAGLCKGYTGSDLFDLCKKAAYFPIREILHNEKKGEQSCEPRPLSQADLEEALSTSRKTSVAANEYSRKTSKTSRGVR*