AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039847.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039847.01.T01 MTR_7g080370 72.696 293 45 4 63 335 141 418 2.29e-140 409
MsG0780039847.01.T01 MTR_7g080370 81.818 77 13 1 1 77 9 84 2.67e-34 133
MsG0780039847.01.T01 MTR_7g080370 71.731 283 45 4 63 325 141 408 2.25e-131 385
MsG0780039847.01.T01 MTR_7g080370 81.818 77 13 1 1 77 9 84 2.17e-34 133
MsG0780039847.01.T01 MTR_4g068080 58.333 228 66 4 63 273 140 355 6.70e-81 256
MsG0780039847.01.T01 MTR_4g068080 61.538 65 24 1 1 64 7 71 3.72e-19 89.7
MsG0780039847.01.T01 MTR_1g083960 44.105 229 99 3 63 274 140 356 4.02e-58 197
MsG0780039847.01.T01 MTR_1g083960 42.188 64 37 0 14 77 21 84 6.93e-12 67.4
MsG0780039847.01.T01 MTR_8g095680 50.000 70 30 2 192 259 330 396 1.39e-11 67.0
MsG0780039847.01.T01 MTR_3g098430 51.429 70 29 3 192 259 327 393 2.45e-11 66.2
MsG0780039847.01.T01 MTR_3g098430 51.429 70 29 3 192 259 327 393 2.56e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039847.01.T01 AT1G08450 57.823 294 87 6 63 335 144 421 8.33e-93 287
MsG0780039847.01.T01 AT1G08450 50.617 81 33 1 4 77 8 88 8.77e-19 88.6
MsG0780039847.01.T01 AT1G08450 46.809 376 140 11 4 335 8 367 4.12e-87 271
MsG0780039847.01.T01 AT1G08450 53.430 277 101 5 63 335 144 396 1.30e-72 234
MsG0780039847.01.T01 AT1G08450 50.617 81 33 1 4 77 8 88 6.63e-19 88.6
MsG0780039847.01.T01 AT1G09210 43.697 238 104 4 63 282 138 363 4.50e-58 197
MsG0780039847.01.T01 AT1G09210 41.333 75 44 0 3 77 8 82 2.24e-15 78.2
MsG0780039847.01.T01 AT1G56340 42.857 238 106 4 63 282 138 363 3.44e-57 194
MsG0780039847.01.T01 AT1G56340 51.351 74 34 2 4 77 11 82 1.31e-16 82.0
MsG0780039847.01.T01 AT1G56340 42.857 238 106 4 63 282 138 363 4.01e-57 194
MsG0780039847.01.T01 AT1G56340 51.351 74 34 2 4 77 11 82 1.07e-16 82.4
MsG0780039847.01.T01 AT5G07340 41.975 81 34 2 197 264 324 404 2.68e-11 65.9
MsG0780039847.01.T01 AT5G07340 41.975 81 34 2 197 264 316 396 2.77e-11 65.9
MsG0780039847.01.T01 AT5G61790 50.667 75 32 3 192 264 323 394 3.66e-11 65.5

Find 99 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTCTATCCAACCACTAA+TGG 0.249755 7:+69695016 None:intergenic
CACTGCAGGTCCTTCTTTAC+CGG 0.255730 7:+69699670 None:intergenic
GTATGCTGGATTGGTATCTT+TGG 0.263743 7:+69698227 None:intergenic
ATATATTTGGCCCAGGTTAA+AGG 0.268238 7:-69697717 MsG0780039847.01.T01:intron
TTCCATTTCCCTTTGTAGTT+AGG 0.319731 7:+69698062 None:intergenic
CCAATCTGCGGGCTGCGAAT+AGG 0.339515 7:+69698624 None:intergenic
CAACTAACCTCTTTAGCCTT+TGG 0.340138 7:+69698420 None:intergenic
GTTCATGTACCTCCTCCTCT+TGG 0.352586 7:+69697234 None:intergenic
TCAAGCACACAGCTGGGAAA+TGG 0.361223 7:-69700637 MsG0780039847.01.T01:CDS
TTCCATGGTCCTTTGTATGC+TGG 0.361782 7:+69698213 None:intergenic
ACCTCAGGTTTGACAGCATT+AGG 0.362351 7:+69698577 None:intergenic
ATGAAGATGAAGATGGAATA+TGG 0.364616 7:-69698256 MsG0780039847.01.T01:intron
CTCTATTGAGTTAGTTGATT+CGG 0.370707 7:-69695114 MsG0780039847.01.T01:CDS
TCTATGCCGACATATTTGAT+AGG 0.381388 7:+69697877 None:intergenic
CCTCAGGTTTGACAGCATTA+GGG 0.383111 7:+69698578 None:intergenic
TGAGGCTGCTGATAAGAATA+TGG 0.383869 7:-69695159 MsG0780039847.01.T01:CDS
TTACAAAGTGTTCCCATTAG+TGG 0.387003 7:-69695029 MsG0780039847.01.T01:CDS
CTATTCGCAGCCCGCAGATT+GGG 0.390617 7:-69698623 MsG0780039847.01.T01:CDS
ACCTCTTTAGCCTTTGGATC+AGG 0.399373 7:+69698426 None:intergenic
CAATCTGCGGGCTGCGAATA+GGG 0.400019 7:+69698625 None:intergenic
CTCTCTATCCAACCACTAAT+GGG 0.401742 7:+69695017 None:intergenic
TTCATGTACCTCCTCCTCTT+GGG 0.404891 7:+69697235 None:intergenic
ATCCTAACTACAAAGGGAAA+TGG 0.410266 7:-69698064 MsG0780039847.01.T01:CDS
AATATGTCGGCATAGAAGTT+TGG 0.412710 7:-69697870 MsG0780039847.01.T01:CDS
GGTTCGTTCAAGCACACAGC+TGG 0.418044 7:-69700644 MsG0780039847.01.T01:CDS
TGTTCTGTAACATGTTCTCT+TGG 0.418609 7:+69695207 None:intergenic
AAAATTGCTTATTCCGCAAA+TGG 0.420029 7:-69701357 MsG0780039847.01.T01:five_prime_UTR
TCTGAAATCATGTTTCTCAT+TGG 0.422386 7:+69695250 None:intergenic
CCTATTCGCAGCCCGCAGAT+TGG 0.426278 7:-69698624 MsG0780039847.01.T01:CDS
TTTGGATCAGGAATTTCTGC+TGG 0.426476 7:+69698438 None:intergenic
TTGCAATTGCTTACTGCAAA+AGG 0.426791 7:+69695056 None:intergenic
CTTACTGCAAAAGGTATCTC+TGG 0.429585 7:+69695065 None:intergenic
GGCTTAAGCACATAAAGATC+GGG 0.434356 7:+69697898 None:intergenic
CAACAAGTACCTTTATCATC+TGG 0.442115 7:+69700605 None:intergenic
CAAGCACACAGCTGGGAAAT+GGG 0.446144 7:-69700636 MsG0780039847.01.T01:CDS
ATTGGCAATTATCTTACCAT+TGG 0.456552 7:+69695268 None:intergenic
AGATGGATGGCGAAGTCGTT+GGG 0.466818 7:-69700702 MsG0780039847.01.T01:CDS
CAACAAACCTTTCGTTTCCA+TGG 0.469118 7:+69698198 None:intergenic
GCTGGAGATCCAGATGATAA+AGG 0.477830 7:-69700614 MsG0780039847.01.T01:intron
TCCTGATCCAAAGGCTAAAG+AGG 0.483883 7:-69698427 MsG0780039847.01.T01:intron
TGGTCCTTTGTATGCTGGAT+TGG 0.485405 7:+69698218 None:intergenic
TTGGATCAGGAATTTCTGCT+GGG 0.499650 7:+69698439 None:intergenic
CACACAGCTGGGAAATGGGC+TGG 0.501352 7:-69700632 MsG0780039847.01.T01:CDS
TGATAATAGAGAGCGAGATT+CGG 0.502176 7:-69699578 MsG0780039847.01.T01:CDS
CCATTAGTGGTTGGATAGAG+AGG 0.503350 7:-69695016 MsG0780039847.01.T01:CDS
AAGAAAAGCCCAAGAGGAGG+AGG 0.504679 7:-69697243 MsG0780039847.01.T01:intron
AGCTGTGTGCTTGAACGAAC+CGG 0.506601 7:+69700646 None:intergenic
TCAAGAATCCTAACTACAAA+GGG 0.508174 7:-69698070 MsG0780039847.01.T01:CDS
ACTTGTCAGTTTCACACTGC+AGG 0.509837 7:+69699656 None:intergenic
TCAAAATTACCCGGTAAAGA+AGG 0.510564 7:-69699680 MsG0780039847.01.T01:CDS
GAGCAAGAGAAGACGGTGAA+AGG 0.515516 7:-69697118 MsG0780039847.01.T01:CDS
GCAGCATCGCCGCGATTACA+TGG 0.517741 7:-69696703 MsG0780039847.01.T01:intron
TTCTCTGTCGTCCCAATCTG+CGG 0.522625 7:+69698612 None:intergenic
AGAACACTGTATGTAGCATC+TGG 0.525406 7:+69699604 None:intergenic
AGATGCTACATACAGTGTTC+TGG 0.526327 7:-69699602 MsG0780039847.01.T01:CDS
AGGCTTAAGCACATAAAGAT+CGG 0.527530 7:+69697897 None:intergenic
AAAGTGTTCCCATTAGTGGT+TGG 0.533799 7:-69695025 MsG0780039847.01.T01:CDS
ATCTGTCTCTATGTCTGTCA+CGG 0.542268 7:+69697066 None:intergenic
ATGTTTGGACCAGATTTATG+TGG 0.542362 7:-69699745 MsG0780039847.01.T01:intron
AAAAGTAGCGAAGGCAAAGC+CGG 0.546475 7:-69700665 MsG0780039847.01.T01:CDS
ATCAAGAATCCTAACTACAA+AGG 0.551395 7:-69698071 MsG0780039847.01.T01:CDS
ATGAAGATGGAATATGGAAG+AGG 0.552425 7:-69698250 MsG0780039847.01.T01:intron
TCTCTGTCGTCCCAATCTGC+GGG 0.553759 7:+69698613 None:intergenic
ACATAGAGACAGATATAGAA+AGG 0.555956 7:-69697057 MsG0780039847.01.T01:intron
TGTCGGCATAGAAGTTTGGC+AGG 0.557113 7:-69697866 MsG0780039847.01.T01:intron
AAGGGAAATGGAAAACTCCA+TGG 0.558271 7:-69698052 MsG0780039847.01.T01:CDS
GCTCAAAGAGCAAGAGAAGA+CGG 0.562934 7:-69697125 MsG0780039847.01.T01:CDS
AAGATGGATGGCGAAGTCGT+TGG 0.569423 7:-69700703 MsG0780039847.01.T01:CDS
GAAAATAAGAAAAGCCCAAG+AGG 0.570219 7:-69697249 MsG0780039847.01.T01:CDS
ACATTTAGGTCTCATTGTTG+CGG 0.572237 7:-69698691 MsG0780039847.01.T01:intron
ACTCCATGGATTGATAATCC+AGG 0.577290 7:-69698038 MsG0780039847.01.T01:intron
AGCAGAAATTCCTGATCCAA+AGG 0.579110 7:-69698436 MsG0780039847.01.T01:CDS
CAAGAGAAGACGGTGAAAGG+CGG 0.587834 7:-69697115 MsG0780039847.01.T01:CDS
ACTGCAGGTCCTTCTTTACC+GGG 0.588635 7:+69699671 None:intergenic
ATACCTGGATTATCAATCCA+TGG 0.589530 7:+69698035 None:intergenic
AATGAGAAACATGATTTCAG+AGG 0.596917 7:-69695248 MsG0780039847.01.T01:CDS
GTCGTTGGGTAAGATCAGAC+TGG 0.597270 7:-69700688 MsG0780039847.01.T01:CDS
AAGTAGTAACAATAATAATG+AGG 0.598545 7:-69695177 MsG0780039847.01.T01:CDS
CTTAAGCCTATCAAATATGT+CGG 0.600649 7:-69697883 MsG0780039847.01.T01:CDS
GCAACTCTACAAACTTCCAA+TGG 0.605352 7:-69695284 MsG0780039847.01.T01:CDS
ACTCTAAGTCTAGCTGGCTA+AGG 0.607893 7:-69695324 MsG0780039847.01.T01:intron
GTTCGTTCAAGCACACAGCT+GGG 0.609959 7:-69700643 MsG0780039847.01.T01:CDS
AATAAGAAAAGCCCAAGAGG+AGG 0.620304 7:-69697246 MsG0780039847.01.T01:CDS
ATTGCTTATTCCGCAAATGG+CGG 0.631161 7:-69701354 MsG0780039847.01.T01:five_prime_UTR
CATGTCATAGTCTCTTACCA+AGG 0.632816 7:-69699703 MsG0780039847.01.T01:CDS
CAAAGGACCATGGAAACGAA+AGG 0.637290 7:-69698205 MsG0780039847.01.T01:intron
TCAGACTGGAAAAGTAGCGA+AGG 0.639971 7:-69700674 MsG0780039847.01.T01:CDS
GATACCAATCCAGCATACAA+AGG 0.644701 7:-69698222 MsG0780039847.01.T01:CDS
TTACCAAGGTCAAAATTACC+CGG 0.651196 7:-69699689 MsG0780039847.01.T01:CDS
ATCCAGCATACAAAGGACCA+TGG 0.651342 7:-69698215 MsG0780039847.01.T01:CDS
AACATGTTACAGAACAACAA+AGG 0.655131 7:-69695200 MsG0780039847.01.T01:CDS
CCCTAATGCTGTCAAACCTG+AGG 0.659724 7:-69698578 MsG0780039847.01.T01:intron
GGCTAAGGACACACAAACTG+AGG 0.666813 7:-69695309 MsG0780039847.01.T01:CDS
TATTTGGCCCAGGTTAAAGG+CGG 0.669053 7:-69697714 MsG0780039847.01.T01:intron
CTTGGTAAGAGACTATGACA+TGG 0.669207 7:+69699704 None:intergenic
GATAATCATCCATGTAATCG+CGG 0.671982 7:+69696694 None:intergenic
GAAAGGCGGAGAAAAGAGAG+AGG 0.679954 7:-69697101 MsG0780039847.01.T01:CDS
GCTTAAGCACATAAAGATCG+GGG 0.701732 7:+69697899 None:intergenic
TGAAGTGTTTGCCAACAGAG+AGG 0.753342 7:-69697631 MsG0780039847.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATTAATGCATATATT+TGG - Chr7:69698644-69698663 MsG0780039847.01.T01:CDS 10.0%
!! TTAAAGAAAAAATAATACTT+TGG + Chr7:69697534-69697553 None:intergenic 10.0%
!!! TTTTAGCTTAATTATTTTTT+TGG + Chr7:69697198-69697217 None:intergenic 10.0%
!! AAAATGAATAAAAGACAAAT+AGG - Chr7:69695536-69695555 MsG0780039847.01.T01:intron 15.0%
!! ACTTAATAATGATATATAGT+TGG - Chr7:69700229-69700248 MsG0780039847.01.T01:intron 15.0%
!! AGAAAAAGTTATTATTACAT+TGG + Chr7:69697470-69697489 None:intergenic 15.0%
!! ATGTATAAAAGTTAGATATA+AGG - Chr7:69697073-69697092 MsG0780039847.01.T01:CDS 15.0%
!! ATTGTTAATCAAAAGAAATT+TGG - Chr7:69696224-69696243 MsG0780039847.01.T01:intron 15.0%
!! GTAACATATTATTAATTGAA+GGG + Chr7:69697504-69697523 None:intergenic 15.0%
!! TACTCATAAATAAACATATT+AGG + Chr7:69699481-69699500 None:intergenic 15.0%
!! TGTAACATATTATTAATTGA+AGG + Chr7:69697505-69697524 None:intergenic 15.0%
!! TTTGATTAATATTAAAGTAG+AGG + Chr7:69696359-69696378 None:intergenic 15.0%
!!! AAAAAATACATGGATTATTA+AGG + Chr7:69697146-69697165 None:intergenic 15.0%
!!! AACTCATTTATTTTTTTCAT+TGG - Chr7:69697890-69697909 MsG0780039847.01.T01:CDS 15.0%
!!! AATGTAAAATGGATTATTAT+AGG - Chr7:69695849-69695868 MsG0780039847.01.T01:intron 15.0%
!!! ACTTTTATACATAAAAGATA+AGG + Chr7:69697065-69697084 None:intergenic 15.0%
!!! ATATTTCTAATGACATTATT+AGG + Chr7:69699557-69699576 None:intergenic 15.0%
!!! ATGACTTTTTTTTTTTTTGA+AGG + Chr7:69699847-69699866 None:intergenic 15.0%
!!! CTTGTAATTTTATTGTAAAA+GGG - Chr7:69695938-69695957 MsG0780039847.01.T01:intron 15.0%
!!! TCATAACATTAGTTTAAAAA+GGG - Chr7:69699863-69699882 MsG0780039847.01.T01:intron 15.0%
!!! TCATTTTGAAACATTTTTTT+TGG + Chr7:69697431-69697450 None:intergenic 15.0%
!!! TCTTGTAATTTTATTGTAAA+AGG - Chr7:69695937-69695956 MsG0780039847.01.T01:intron 15.0%
!! AAATTATCCTAATCAACTAT+TGG + Chr7:69697568-69697587 None:intergenic 20.0%
!! AAGTAGTAACAATAATAATG+AGG - Chr7:69701197-69701216 MsG0780039847.01.T01:intron 20.0%
!! AATAGTTGATTAGGATAATT+TGG - Chr7:69697567-69697586 MsG0780039847.01.T01:intron 20.0%
!! ACAAAGAACAAGAAATAAAT+TGG + Chr7:69698368-69698387 None:intergenic 20.0%
!! ACATTAATATCACAAATCAA+TGG + Chr7:69695638-69695657 None:intergenic 20.0%
!! AGTGAAAAGTTAGTTAAATT+TGG - Chr7:69695199-69695218 MsG0780039847.01.T01:CDS 20.0%
!! ATTAATAGAGGATAGATAAA+AGG + Chr7:69699506-69699525 None:intergenic 20.0%
!! CTATTACTTCAAGAATTAAT+TGG - Chr7:69695365-69695384 MsG0780039847.01.T01:intron 20.0%
!! CTCTATTAATAAAATATACG+TGG - Chr7:69699516-69699535 MsG0780039847.01.T01:intron 20.0%
!! GTGAAGTTATAAAAAATACA+TGG + Chr7:69697156-69697175 None:intergenic 20.0%
!! TCAAAAGCTAATTAAACTAA+CGG - Chr7:69696410-69696429 MsG0780039847.01.T01:intron 20.0%
!! TCTAAATAGAGAAATATATG+AGG - Chr7:69698031-69698050 MsG0780039847.01.T01:intron 20.0%
!! TGTGATTATGATTATAAGAA+TGG - Chr7:69695467-69695486 MsG0780039847.01.T01:intron 20.0%
!! TTAATCAAAAGAAATTTGGT+GGG - Chr7:69696228-69696247 MsG0780039847.01.T01:intron 20.0%
!!! AAAAAGTGTGTTTGTAAAAA+TGG + Chr7:69696540-69696559 None:intergenic 20.0%
!!! AAATTTGGCTATTTTGAATA+AGG - Chr7:69700893-69700912 MsG0780039847.01.T01:intron 20.0%
!!! ATCTTTTATAAAACACTGTT+TGG + Chr7:69697027-69697046 None:intergenic 20.0%
!!! CAAGGTTTTATTAGAAAATT+TGG - Chr7:69700878-69700897 MsG0780039847.01.T01:intron 20.0%
!!! CACGTATATTTTATTAATAG+AGG + Chr7:69699518-69699537 None:intergenic 20.0%
!!! CATAACATTAGTTTAAAAAG+GGG - Chr7:69699864-69699883 MsG0780039847.01.T01:intron 20.0%
!!! GTCATAACATTAGTTTAAAA+AGG - Chr7:69699862-69699881 MsG0780039847.01.T01:intron 20.0%
!!! GTTAACTATTAGATGTATTT+TGG - Chr7:69695871-69695890 MsG0780039847.01.T01:intron 20.0%
!!! TAGACAAGTTTGAATTTTAT+CGG + Chr7:69700818-69700837 None:intergenic 20.0%
! AAAATACCATGTTACAACAA+GGG + Chr7:69696506-69696525 None:intergenic 25.0%
! AAACAAAAAAAAGTGATGTG+TGG - Chr7:69695578-69695597 MsG0780039847.01.T01:intron 25.0%
! AAACAAACCAATAGTTGATT+AGG - Chr7:69697558-69697577 MsG0780039847.01.T01:intron 25.0%
! AAACTAATGTTATGACTTGA+AGG + Chr7:69699823-69699842 None:intergenic 25.0%
! AAACTCTTAATTATTTGTGC+AGG - Chr7:69699224-69699243 MsG0780039847.01.T01:intron 25.0%
! AAGAAAAAGTTGACCATATT+TGG + Chr7:69699789-69699808 None:intergenic 25.0%
! AAGAGATGATAATTGATGAA+AGG + Chr7:69698260-69698279 None:intergenic 25.0%
! AATAAAATCTCACTTCGAAA+AGG + Chr7:69698966-69698985 None:intergenic 25.0%
! AATTCAAACTTGTCTAAAGA+TGG - Chr7:69700822-69700841 MsG0780039847.01.T01:intron 25.0%
! ACAATTTCAAACAAAAGTCT+TGG + Chr7:69700565-69700584 None:intergenic 25.0%
! ACTTTCATCTCAAATTCATT+TGG - Chr7:69699967-69699986 MsG0780039847.01.T01:intron 25.0%
! AGTATAAGGTAAATCACTTA+TGG + Chr7:69697378-69697397 None:intergenic 25.0%
! ATATCGGAATAGATTTATAG+AGG + Chr7:69698004-69698023 None:intergenic 25.0%
! CAAAAACTAAGTGAAGAAAA+TGG + Chr7:69696282-69696301 None:intergenic 25.0%
! CAATCAGATAAAGATAACAA+AGG + Chr7:69700131-69700150 None:intergenic 25.0%
! CGTGTAAAAATTATGTATGA+GGG - Chr7:69695910-69695929 MsG0780039847.01.T01:intron 25.0%
! CTATTTAGAAGTCATCATAT+CGG + Chr7:69698020-69698039 None:intergenic 25.0%
! CTTAAAAATATTGTGATCGA+TGG - Chr7:69700327-69700346 MsG0780039847.01.T01:intron 25.0%
! CTTTCATCTCAAATTCATTT+GGG - Chr7:69699968-69699987 MsG0780039847.01.T01:intron 25.0%
! GAAATAAATTGGAATATACC+TGG + Chr7:69698357-69698376 None:intergenic 25.0%
! GACAAGAGAAATAAAGATAA+TGG + Chr7:69699181-69699200 None:intergenic 25.0%
! GATTTGTGATATTAATGTGT+TGG - Chr7:69695640-69695659 MsG0780039847.01.T01:intron 25.0%
! GCTATGAATGAAATGTAAAA+TGG - Chr7:69695838-69695857 MsG0780039847.01.T01:intron 25.0%
! GTTAATCAAAAGAAATTTGG+TGG - Chr7:69696227-69696246 MsG0780039847.01.T01:intron 25.0%
! TAAAATACCATGTTACAACA+AGG + Chr7:69696507-69696526 None:intergenic 25.0%
! TAAATATGTGTCTTCTCTTA+GGG - Chr7:69699036-69699055 MsG0780039847.01.T01:intron 25.0%
! TAAATCACTTATGGAAAAAC+AGG + Chr7:69697369-69697388 None:intergenic 25.0%
! TAACTAAATGACTGTACATA+AGG + Chr7:69699596-69699615 None:intergenic 25.0%
! TAAGAGTTTAGATTCTGTTA+AGG + Chr7:69699213-69699232 None:intergenic 25.0%
! TAGTTATCAGTGTATTATGT+TGG - Chr7:69699923-69699942 MsG0780039847.01.T01:intron 25.0%
! TGTTCAAATTTATTGAGTAC+TGG + Chr7:69696162-69696181 None:intergenic 25.0%
! TTAAATATGTGTCTTCTCTT+AGG - Chr7:69699035-69699054 MsG0780039847.01.T01:intron 25.0%
! TTCCAATAATTAACAACAGA+TGG + Chr7:69700209-69700228 None:intergenic 25.0%
! TTCCATCTGTTGTTAATTAT+TGG - Chr7:69700204-69700223 MsG0780039847.01.T01:intron 25.0%
!! AAATGAGTTTTCCATACAAA+TGG + Chr7:69697879-69697898 None:intergenic 25.0%
!! CTGTTGAAAAGTATAAAATG+CGG + Chr7:69696573-69696592 None:intergenic 25.0%
!! GTAATTTTATTGTAAAAGGG+AGG - Chr7:69695941-69695960 MsG0780039847.01.T01:intron 25.0%
!! TAAGCATTTACTAGTTTGAA+TGG + Chr7:69698417-69698436 None:intergenic 25.0%
!! TAATCAAAAGAAATTTGGTG+GGG - Chr7:69696229-69696248 MsG0780039847.01.T01:intron 25.0%
!! TTTTAATGCCAAAATAAGTC+TGG - Chr7:69697290-69697309 MsG0780039847.01.T01:intron 25.0%
!! TTTTCTTCTGATGATAAGTA+GGG - Chr7:69699728-69699747 MsG0780039847.01.T01:CDS 25.0%
!! TTTTTCTTCTGATGATAAGT+AGG - Chr7:69699727-69699746 MsG0780039847.01.T01:CDS 25.0%
!!! ACTTTTGTTTGAAATTGTTC+GGG - Chr7:69700567-69700586 MsG0780039847.01.T01:intron 25.0%
!!! AGAAATAAGGCTAATTTGTT+TGG + Chr7:69697235-69697254 None:intergenic 25.0%
!!! ATAAGGAACTTTTCTAAAAG+TGG - Chr7:69697090-69697109 MsG0780039847.01.T01:CDS 25.0%
!!! ATTTTTTTCATTGGTATTGC+AGG - Chr7:69697899-69697918 MsG0780039847.01.T01:CDS 25.0%
!!! GACTTTTGTTTGAAATTGTT+CGG - Chr7:69700566-69700585 MsG0780039847.01.T01:intron 25.0%
!!! GCATAAGTGTTTTAGAAATA+AGG + Chr7:69697248-69697267 None:intergenic 25.0%
!!! TTAAACTGACCTTTATTTTG+TGG - Chr7:69699065-69699084 MsG0780039847.01.T01:intron 25.0%
!!! TTCACTTATATTTTTACCGT+TGG + Chr7:69695185-69695204 None:intergenic 25.0%
!!! TTTTTTTCATTGGTATTGCA+GGG - Chr7:69697900-69697919 MsG0780039847.01.T01:CDS 25.0%
AAAATTGCTTATTCCGCAAA+TGG - Chr7:69695017-69695036 MsG0780039847.01.T01:CDS 30.0%
AAAGATCTCAAGGCAAAAAA+AGG - Chr7:69696862-69696881 MsG0780039847.01.T01:intron 30.0%
AAATGGTAGTAGCATGAATT+TGG - Chr7:69696008-69696027 MsG0780039847.01.T01:intron 30.0%
AACATGTTACAGAACAACAA+AGG - Chr7:69701174-69701193 MsG0780039847.01.T01:intron 30.0%
AATCTTCAATACTGTGTTAG+TGG - Chr7:69700684-69700703 MsG0780039847.01.T01:CDS 30.0%
AATGACATTATTAGGAATGC+TGG + Chr7:69699549-69699568 None:intergenic 30.0%
AATGAGAAACATGATTTCAG+AGG - Chr7:69701126-69701145 MsG0780039847.01.T01:intron 30.0%
AATTCAGCAATGCAATAAGA+TGG - Chr7:69700792-69700811 MsG0780039847.01.T01:intron 30.0%
ACATAGAGACAGATATAGAA+AGG - Chr7:69699317-69699336 MsG0780039847.01.T01:intron 30.0%
ACGAAAAATCAAAGATCTCA+AGG - Chr7:69696852-69696871 MsG0780039847.01.T01:intron 30.0%
AGAGAAGACACATATTTAAG+AGG + Chr7:69699034-69699053 None:intergenic 30.0%
ATACAAGTCATCACTGAATT+TGG + Chr7:69698552-69698571 None:intergenic 30.0%
ATATTGATCGTATGCATGTA+TGG + Chr7:69699349-69699368 None:intergenic 30.0%
ATCAAGAATCCTAACTACAA+AGG - Chr7:69698303-69698322 MsG0780039847.01.T01:intron 30.0%
ATGAAGATGAAGATGGAATA+TGG - Chr7:69698118-69698137 MsG0780039847.01.T01:intron 30.0%
ATTAGAACTTTGAATACCTC+AGG + Chr7:69697815-69697834 None:intergenic 30.0%
ATTCTCTACAGTGTAATGTT+TGG - Chr7:69696614-69696633 MsG0780039847.01.T01:intron 30.0%
ATTGGCAATTATCTTACCAT+TGG + Chr7:69701109-69701128 None:intergenic 30.0%
ATTTCAAACAAAAGTCTTGG+CGG + Chr7:69700562-69700581 None:intergenic 30.0%
CAAATGAACACAATTAACTC+TGG - Chr7:69700509-69700528 MsG0780039847.01.T01:intron 30.0%
CTCTATTGAGTTAGTTGATT+CGG - Chr7:69701260-69701279 MsG0780039847.01.T01:CDS 30.0%
CTTAAGCCTATCAAATATGT+CGG - Chr7:69698491-69698510 MsG0780039847.01.T01:intron 30.0%
GCGTGTAAAAATTATGTATG+AGG - Chr7:69695909-69695928 MsG0780039847.01.T01:intron 30.0%
GGAACATACTACAAATATCA+AGG + Chr7:69700188-69700207 None:intergenic 30.0%
GTAAATCACATTCAATGGAT+TGG - Chr7:69700448-69700467 MsG0780039847.01.T01:intron 30.0%
TAATCTTTCCCCTATGATAA+AGG - Chr7:69697831-69697850 MsG0780039847.01.T01:intron 30.0%
TACATGAACATACACTACTT+CGG - Chr7:69699154-69699173 MsG0780039847.01.T01:intron 30.0%
TATTTGTCTTGTCCTCAAAA+AGG + Chr7:69699404-69699423 None:intergenic 30.0%
TCAAGAATCCTAACTACAAA+GGG - Chr7:69698304-69698323 MsG0780039847.01.T01:intron 30.0%
TCTAACGCAATTTAAATGCA+TGG - Chr7:69700426-69700445 MsG0780039847.01.T01:intron 30.0%
TGCACACATATTAAGGAATA+TGG + Chr7:69697624-69697643 None:intergenic 30.0%
TTCCTTAATATGTGTGCAAT+TGG - Chr7:69697626-69697645 MsG0780039847.01.T01:intron 30.0%
! AAATGTTTCTTTTGATGTGC+AGG - Chr7:69700081-69700100 MsG0780039847.01.T01:intron 30.0%
! ATATTCTTGTCAAGTTGTCT+CGG + Chr7:69700981-69701000 None:intergenic 30.0%
! ATTTGAAATACCACAGTAAC+AGG + Chr7:69701017-69701036 None:intergenic 30.0%
! CTCAATATCTAACTTGTAAG+TGG - Chr7:69698799-69698818 MsG0780039847.01.T01:intron 30.0%
! CTGTTGTTCTTCTCTTTTAT+TGG - Chr7:69696471-69696490 MsG0780039847.01.T01:intron 30.0%
! TATTGAAGATTTTGTCCAAC+AGG + Chr7:69700675-69700694 None:intergenic 30.0%
! TCTGAAATCATGTTTCTCAT+TGG + Chr7:69701127-69701146 None:intergenic 30.0%
! TGCTGAAATTTTCATTCCAA+CGG - Chr7:69695166-69695185 MsG0780039847.01.T01:CDS 30.0%
! TTGATTTTCTGTCAACATAG+AGG + Chr7:69698288-69698307 None:intergenic 30.0%
! TTTGAAATACCACAGTAACA+GGG + Chr7:69701016-69701035 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + Chr7:69697405-69697424 None:intergenic 30.0%
!! ACATTCAATGGATTGGTTAA+TGG - Chr7:69700455-69700474 MsG0780039847.01.T01:intron 30.0%
!! ATTTTTGTGCATCTTGTTGT+AGG - Chr7:69696052-69696071 MsG0780039847.01.T01:intron 30.0%
!! CTTCTTTTAAGGAGAAGAAA+AGG + Chr7:69696999-69697018 None:intergenic 30.0%
!! CTTTTGTTTGAAATTGTTCG+GGG - Chr7:69700568-69700587 MsG0780039847.01.T01:intron 30.0%
!! GTTTGGCTTAACTTCTTTTA+AGG + Chr7:69697010-69697029 None:intergenic 30.0%
!! TGTGTTGGATTTTGAAAAGA+TGG - Chr7:69695655-69695674 MsG0780039847.01.T01:intron 30.0%
!! TTGAGATCTTTGATTTTTCG+TGG + Chr7:69696853-69696872 None:intergenic 30.0%
!! TTGGATTTTGAAAAGATGGA+TGG - Chr7:69695659-69695678 MsG0780039847.01.T01:intron 30.0%
!! TTTTGATTAACAATCCAGAG+AGG + Chr7:69696218-69696237 None:intergenic 30.0%
!! TTTTGTTTGAAATTGTTCGG+GGG - Chr7:69700569-69700588 MsG0780039847.01.T01:intron 30.0%
!!! AACACTTGTTTTTGTACATC+AGG + Chr7:69700381-69700400 None:intergenic 30.0%
!!! ACAACTTGTTTTGCATATTC+AGG + Chr7:69698720-69698739 None:intergenic 30.0%
!!! AGATGTATTTTGGAGTAGTT+TGG - Chr7:69695881-69695900 MsG0780039847.01.T01:intron 30.0%
!!! ATTTTGGAGTAGTTTGGTTT+TGG - Chr7:69695887-69695906 MsG0780039847.01.T01:intron 30.0%
!!! GATGTTTTAGTCCATTTGTA+TGG - Chr7:69697865-69697884 MsG0780039847.01.T01:intron 30.0%
AAAAGAGAAGAACAACAGCA+TGG + Chr7:69696469-69696488 None:intergenic 35.0%
AAGGAAACTGAGTATAGTAG+AGG - Chr7:69700912-69700931 MsG0780039847.01.T01:intron 35.0%
AATAGCACAGATACTCAGAT+TGG - Chr7:69699420-69699439 MsG0780039847.01.T01:intron 35.0%
AATATGTCGGCATAGAAGTT+TGG - Chr7:69698504-69698523 MsG0780039847.01.T01:intron 35.0%
ACATTTAGGTCTCATTGTTG+CGG - Chr7:69697683-69697702 MsG0780039847.01.T01:CDS 35.0%
AGCCAATTGCACACATATTA+AGG + Chr7:69697631-69697650 None:intergenic 35.0%
AGGCTTAAGCACATAAAGAT+CGG + Chr7:69698480-69698499 None:intergenic 35.0%
ATACCTGGATTATCAATCCA+TGG + Chr7:69698342-69698361 None:intergenic 35.0%
ATATATTTGGCCCAGGTTAA+AGG - Chr7:69698657-69698676 MsG0780039847.01.T01:CDS 35.0%
ATCCTAACTACAAAGGGAAA+TGG - Chr7:69698310-69698329 MsG0780039847.01.T01:intron 35.0%
ATGAAGATGGAATATGGAAG+AGG - Chr7:69698124-69698143 MsG0780039847.01.T01:intron 35.0%
ATGTTTGGACCAGATTTATG+TGG - Chr7:69696629-69696648 MsG0780039847.01.T01:intron 35.0%
CAAAAAAAAGTGATGTGTGG+TGG - Chr7:69695581-69695600 MsG0780039847.01.T01:intron 35.0%
CAACAAGTACCTTTATCATC+TGG + Chr7:69695772-69695791 None:intergenic 35.0%
CAATACTGTGTTAGTGGAAA+GGG - Chr7:69700690-69700709 MsG0780039847.01.T01:CDS 35.0%
CAGCGAAAAATCAATACACA+CGG + Chr7:69698871-69698890 None:intergenic 35.0%
CCTCTTGTTCCTTTATCATA+GGG + Chr7:69697843-69697862 None:intergenic 35.0%
CTACCATTGTTGCAGAATAA+CGG + Chr7:69700757-69700776 None:intergenic 35.0%
CTCTTAATTATTTGTGCAGG+AGG - Chr7:69699227-69699246 MsG0780039847.01.T01:intron 35.0%
CTCTTGTTCCTTTATCATAG+GGG + Chr7:69697842-69697861 None:intergenic 35.0%
CTGTTCTTGTTACTGAATTC+TGG + Chr7:69696127-69696146 None:intergenic 35.0%
GAAAATAAGAAAAGCCCAAG+AGG - Chr7:69699125-69699144 MsG0780039847.01.T01:intron 35.0%
GAATATCCCAATCTGTATAC+AGG + Chr7:69696825-69696844 None:intergenic 35.0%
GATAATCATCCATGTAATCG+CGG + Chr7:69699683-69699702 None:intergenic 35.0%
GCATGGTAAATCACATTCAA+TGG - Chr7:69700443-69700462 MsG0780039847.01.T01:intron 35.0%
GTGTGTTTGTAAAAATGGCA+AGG + Chr7:69696535-69696554 None:intergenic 35.0%
GTTTGGCATCATTAGATGTT+TGG + Chr7:69696081-69696100 None:intergenic 35.0%
TAAGACTCTTAAGCTACGTT+TGG + Chr7:69697316-69697335 None:intergenic 35.0%
TAAGTAGGGAACAGATATAG+AGG - Chr7:69699742-69699761 MsG0780039847.01.T01:intron 35.0%
TAGATTCTGTTAAGGCAACA+AGG + Chr7:69699205-69699224 None:intergenic 35.0%
TCAAAATTACCCGGTAAAGA+AGG - Chr7:69696694-69696713 MsG0780039847.01.T01:CDS 35.0%
TCAATACTGTGTTAGTGGAA+AGG - Chr7:69700689-69700708 MsG0780039847.01.T01:CDS 35.0%
TCCTCTTGTTCCTTTATCAT+AGG + Chr7:69697844-69697863 None:intergenic 35.0%
TCTATGCCGACATATTTGAT+AGG + Chr7:69698500-69698519 None:intergenic 35.0%
TGAACTCTGATGGTATAAAG+CGG - Chr7:69700105-69700124 MsG0780039847.01.T01:intron 35.0%
TGATAATAGAGAGCGAGATT+CGG - Chr7:69696796-69696815 MsG0780039847.01.T01:intron 35.0%
TGCAAATTAGTGAAATGCAG+TGG - Chr7:69695977-69695996 MsG0780039847.01.T01:intron 35.0%
TGGTGGTCAATTTCCAAATA+TGG - Chr7:69699773-69699792 MsG0780039847.01.T01:intron 35.0%
TGTTCTGTAACATGTTCTCT+TGG + Chr7:69701170-69701189 None:intergenic 35.0%
TTAATGCATATATTTGGCCC+AGG - Chr7:69698650-69698669 MsG0780039847.01.T01:CDS 35.0%
TTACCAAGGTCAAAATTACC+CGG - Chr7:69696685-69696704 MsG0780039847.01.T01:intron 35.0%
TTCCATTTCCCTTTGTAGTT+AGG + Chr7:69698315-69698334 None:intergenic 35.0%
TTGCAATTGCTTACTGCAAA+AGG + Chr7:69701321-69701340 None:intergenic 35.0%
TTTGAACAAGAGATTGAGTG+TGG - Chr7:69696174-69696193 MsG0780039847.01.T01:intron 35.0%
! AATAGCTTTGCAACAATGCT+TGG + Chr7:69700257-69700276 None:intergenic 35.0%
! AGTGTATTATGTTGGTAGAC+TGG - Chr7:69699931-69699950 MsG0780039847.01.T01:intron 35.0%
! CTAACTTGTAAGTGGCAATT+GGG - Chr7:69698807-69698826 MsG0780039847.01.T01:intron 35.0%
! GATTGAAAAAGAGGCTTTTG+AGG - Chr7:69699095-69699114 MsG0780039847.01.T01:intron 35.0%
! GTGTATTATGTTGGTAGACT+GGG - Chr7:69699932-69699951 MsG0780039847.01.T01:intron 35.0%
! TCTAACTTGTAAGTGGCAAT+TGG - Chr7:69698806-69698825 MsG0780039847.01.T01:intron 35.0%
! TCTGAATTAGCCTGATAGTT+GGG - Chr7:69698095-69698114 MsG0780039847.01.T01:intron 35.0%
! TCTGAGATGCCACAAAATAA+AGG + Chr7:69699077-69699096 None:intergenic 35.0%
! TGAACATTCACTCCTTTTTG+AGG - Chr7:69699389-69699408 MsG0780039847.01.T01:intron 35.0%
! TTACAAAGTGTTCCCATTAG+TGG - Chr7:69701345-69701364 MsG0780039847.01.T01:five_prime_UTR 35.0%
! TTTGGTTGATATAGACCTGT+TGG - Chr7:69700657-69700676 MsG0780039847.01.T01:CDS 35.0%
!! AAAAGCACCATGTATGCTAA+AGG + Chr7:69696933-69696952 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - Chr7:69697652-69697671 MsG0780039847.01.T01:CDS 35.0%
!! AGATCTTTGATTTTTCGTGG+AGG + Chr7:69696850-69696869 None:intergenic 35.0%
!! AGCTTTAGATGATTCCTCAA+AGG - Chr7:69700605-69700624 MsG0780039847.01.T01:intron 35.0%
!! AGGTTTGTTGATAAAGTTGC+AGG - Chr7:69698189-69698208 MsG0780039847.01.T01:intron 35.0%
!! CTTTTCTAAAAGTGGTTGAG+AGG - Chr7:69697098-69697117 MsG0780039847.01.T01:CDS 35.0%
!! GATCTTTGATTTTTCGTGGA+GGG + Chr7:69696849-69696868 None:intergenic 35.0%
!!! ATATAGAGGTGTCATTTTGG+TGG - Chr7:69699756-69699775 MsG0780039847.01.T01:intron 35.0%
!!! CAGATATAGAGGTGTCATTT+TGG - Chr7:69699753-69699772 MsG0780039847.01.T01:intron 35.0%
!!! CTCTAAAGCTACTTTTGATC+TGG - Chr7:69696963-69696982 MsG0780039847.01.T01:intron 35.0%
!!! GTAATGTGCACGAGTTTTTT+AGG - Chr7:69700277-69700296 MsG0780039847.01.T01:intron 35.0%
AAACGGAGGGAGTAACATTT+AGG - Chr7:69697669-69697688 MsG0780039847.01.T01:CDS 40.0%
AAGGGAAATGGAAAACTCCA+TGG - Chr7:69698322-69698341 MsG0780039847.01.T01:intron 40.0%
AATAAGAAAAGCCCAAGAGG+AGG - Chr7:69699128-69699147 MsG0780039847.01.T01:intron 40.0%
ACACTGTCCTTTAGCATACA+TGG - Chr7:69696923-69696942 MsG0780039847.01.T01:intron 40.0%
ACATAAGGCTCAACTCAAAG+TGG + Chr7:69699581-69699600 None:intergenic 40.0%
AGAACACTGTATGTAGCATC+TGG + Chr7:69696773-69696792 None:intergenic 40.0%
AGATGCTACATACAGTGTTC+TGG - Chr7:69696772-69696791 MsG0780039847.01.T01:intron 40.0%
AGCAGAAATTCCTGATCCAA+AGG - Chr7:69697938-69697957 MsG0780039847.01.T01:intron 40.0%
AGTTGGGATGAAGATGAAGA+TGG - Chr7:69698111-69698130 MsG0780039847.01.T01:intron 40.0%
ATCTGTCTCTATGTCTGTCA+CGG + Chr7:69699311-69699330 None:intergenic 40.0%
ATTGCTTATTCCGCAAATGG+CGG - Chr7:69695020-69695039 MsG0780039847.01.T01:CDS 40.0%
CAAAAAACTCACCTCTCTGT+TGG + Chr7:69698757-69698776 None:intergenic 40.0%
CAACAAACCTTTCGTTTCCA+TGG + Chr7:69698179-69698198 None:intergenic 40.0%
CAGTAACAAGAACAGAACAC+TGG - Chr7:69696132-69696151 MsG0780039847.01.T01:intron 40.0%
CATGTCATAGTCTCTTACCA+AGG - Chr7:69696671-69696690 MsG0780039847.01.T01:intron 40.0%
CCCTATGATAAAGGAACAAG+AGG - Chr7:69697840-69697859 MsG0780039847.01.T01:intron 40.0%
CGTTATTCTGCAACAATGGT+AGG - Chr7:69700755-69700774 MsG0780039847.01.T01:intron 40.0%
CTCTCTATCCAACCACTAAT+GGG + Chr7:69701360-69701379 None:intergenic 40.0%
CTCTGATCATAGTGACCAAA+TGG + Chr7:69700636-69700655 None:intergenic 40.0%
CTTGGTAAGAGACTATGACA+TGG + Chr7:69696673-69696692 None:intergenic 40.0%
GAAGAACAACAGCATGGATA+TGG + Chr7:69696463-69696482 None:intergenic 40.0%
GAAGATCATGCCTTCAATGT+GGG - Chr7:69700712-69700731 MsG0780039847.01.T01:intron 40.0%
GAATGAGCAACACACCTATA+CGG + Chr7:69696260-69696279 None:intergenic 40.0%
GACAAATAGGACAAGCAAGT+TGG - Chr7:69695549-69695568 MsG0780039847.01.T01:intron 40.0%
GATACCAATCCAGCATACAA+AGG - Chr7:69698152-69698171 MsG0780039847.01.T01:intron 40.0%
GCAACTCTACAAACTTCCAA+TGG - Chr7:69701090-69701109 MsG0780039847.01.T01:intron 40.0%
GCTTAAGCACATAAAGATCG+GGG + Chr7:69698478-69698497 None:intergenic 40.0%
GGCATCTCAGATTGAAAAAG+AGG - Chr7:69699086-69699105 MsG0780039847.01.T01:intron 40.0%
GGCTTAAGCACATAAAGATC+GGG + Chr7:69698479-69698498 None:intergenic 40.0%
GTGTCTGTTCCACATAAATC+TGG + Chr7:69696641-69696660 None:intergenic 40.0%
TACCACAGTAACAGGGATAT+TGG + Chr7:69701009-69701028 None:intergenic 40.0%
TAGATGATTCCTCAAAGGCT+AGG - Chr7:69700610-69700629 MsG0780039847.01.T01:intron 40.0%
TCATCTTCATCCCAACTATC+AGG + Chr7:69698108-69698127 None:intergenic 40.0%
TCTCACTTCGAAAAGGCTTA+AGG + Chr7:69698959-69698978 None:intergenic 40.0%
TCTTGGCGGCTAATATTCTT+GGG + Chr7:69700548-69700567 None:intergenic 40.0%
TGAGGCTGCTGATAAGAATA+TGG - Chr7:69701215-69701234 MsG0780039847.01.T01:intron 40.0%
TGCATTGCTGAATTGAATGC+TGG + Chr7:69700786-69700805 None:intergenic 40.0%
TTCTGGTATCTTTGCAGAGA+TGG + Chr7:69696110-69696129 None:intergenic 40.0%
TTGGATCAGGAATTTCTGCT+GGG + Chr7:69697938-69697957 None:intergenic 40.0%
TTTGGATCAGGAATTTCTGC+TGG + Chr7:69697939-69697958 None:intergenic 40.0%
! AAAGTGTTCCCATTAGTGGT+TGG - Chr7:69701349-69701368 MsG0780039847.01.T01:five_prime_UTR 40.0%
! ACGTTTGGCCAGACTTATTT+TGG + Chr7:69697301-69697320 None:intergenic 40.0%
! ACTCCATGGATTGATAATCC+AGG - Chr7:69698336-69698355 MsG0780039847.01.T01:intron 40.0%
! AGGTTAGTTGAGTAGAAGAG+TGG - Chr7:69697967-69697986 MsG0780039847.01.T01:intron 40.0%
! ATGCAGTGGAGAGTACAAAA+TGG - Chr7:69695991-69696010 MsG0780039847.01.T01:intron 40.0%
! CAACTAACCTCTTTAGCCTT+TGG + Chr7:69697957-69697976 None:intergenic 40.0%
! CTCTGAATTAGCCTGATAGT+TGG - Chr7:69698094-69698113 MsG0780039847.01.T01:intron 40.0%
! GAGGAATCATCTAAAGCTAG+TGG + Chr7:69700603-69700622 None:intergenic 40.0%
! GGAAAAGCAACAGTTAGTCT+CGG - Chr7:69700947-69700966 MsG0780039847.01.T01:intron 40.0%
! GGTCACTATGATCAGAGTTT+TGG - Chr7:69700639-69700658 MsG0780039847.01.T01:CDS 40.0%
! TTTGAAACGGAGGGAGTATA+AGG + Chr7:69697392-69697411 None:intergenic 40.0%
!! AAAGTAGAGGTCATTTTGCG+AGG + Chr7:69696346-69696365 None:intergenic 40.0%
!! CATCTTCAAACTCTGAGACA+CGG + Chr7:69698454-69698473 None:intergenic 40.0%
!! CTTACTGCAAAAGGTATCTC+TGG + Chr7:69701312-69701331 None:intergenic 40.0%
!! GTATGCTGGATTGGTATCTT+TGG + Chr7:69698150-69698169 None:intergenic 40.0%
!! TAGTAGAGGTACTGTAACTG+TGG - Chr7:69700926-69700945 MsG0780039847.01.T01:intron 40.0%
!! TTACCGGGTAATTTTGACCT+TGG + Chr7:69696691-69696710 None:intergenic 40.0%
!!! ATCTTCGAAGAGCGTTTTGA+AGG - Chr7:69695116-69695135 MsG0780039847.01.T01:CDS 40.0%
!!! CGTGTGTATTGATTTTTCGC+TGG - Chr7:69698869-69698888 MsG0780039847.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - Chr7:69697656-69697675 MsG0780039847.01.T01:CDS 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + Chr7:69697675-69697656 None:intergenic 40.0%
AAAAGTAGCGAAGGCAAAGC+CGG - Chr7:69695709-69695728 MsG0780039847.01.T01:intron 45.0%
ACCTCAGGTTTGACAGCATT+AGG + Chr7:69697800-69697819 None:intergenic 45.0%
ACTCTAAGTCTAGCTGGCTA+AGG - Chr7:69701050-69701069 MsG0780039847.01.T01:intron 45.0%
ACTTGTCAGTTTCACACTGC+AGG + Chr7:69696721-69696740 None:intergenic 45.0%
AGCCAATATCCCTGTTACTG+TGG - Chr7:69701004-69701023 MsG0780039847.01.T01:intron 45.0%
ATACTGAACCGCCTTTAACC+TGG + Chr7:69698671-69698690 None:intergenic 45.0%
ATCCAGCATACAAAGGACCA+TGG - Chr7:69698159-69698178 MsG0780039847.01.T01:intron 45.0%
ATGTGCAGGATGAACTCTGA+TGG - Chr7:69700095-69700114 MsG0780039847.01.T01:intron 45.0%
CAAAGGACCATGGAAACGAA+AGG - Chr7:69698169-69698188 MsG0780039847.01.T01:intron 45.0%
CAGACCAGCAATGTTGACAA+GGG - Chr7:69700855-69700874 MsG0780039847.01.T01:intron 45.0%
CAGCCGTTATTCTGCAACAA+TGG - Chr7:69700751-69700770 MsG0780039847.01.T01:intron 45.0%
CCATTAGTGGTTGGATAGAG+AGG - Chr7:69701358-69701377 MsG0780039847.01.T01:five_prime_UTR 45.0%
CCTCAGGTTTGACAGCATTA+GGG + Chr7:69697799-69697818 None:intergenic 45.0%
CCTCTCTATCCAACCACTAA+TGG + Chr7:69701361-69701380 None:intergenic 45.0%
CGGAAGCCTGTATACAGATT+GGG - Chr7:69696816-69696835 MsG0780039847.01.T01:intron 45.0%
CTTGGCGGCTAATATTCTTG+GGG + Chr7:69700547-69700566 None:intergenic 45.0%
GAACAAGAGATTGAGTGTGG+TGG - Chr7:69696177-69696196 MsG0780039847.01.T01:intron 45.0%
GCTCAAAGAGCAAGAGAAGA+CGG - Chr7:69699249-69699268 MsG0780039847.01.T01:intron 45.0%
GCTGGAGATCCAGATGATAA+AGG - Chr7:69695760-69695779 MsG0780039847.01.T01:intron 45.0%
GGAAGATCATGCCTTCAATG+TGG - Chr7:69700711-69700730 MsG0780039847.01.T01:intron 45.0%
GTACTCAGTTCCCACATTGA+AGG + Chr7:69700725-69700744 None:intergenic 45.0%
GTCTTGGCGGCTAATATTCT+TGG + Chr7:69700549-69700568 None:intergenic 45.0%
TACTGAACCGCCTTTAACCT+GGG + Chr7:69698670-69698689 None:intergenic 45.0%
TATTTGGCCCAGGTTAAAGG+CGG - Chr7:69698660-69698679 MsG0780039847.01.T01:CDS 45.0%
TCAGACTGGAAAAGTAGCGA+AGG - Chr7:69695700-69695719 MsG0780039847.01.T01:intron 45.0%
TCCTGATCCAAAGGCTAAAG+AGG - Chr7:69697947-69697966 MsG0780039847.01.T01:intron 45.0%
TCGGAAGCCTGTATACAGAT+TGG - Chr7:69696815-69696834 MsG0780039847.01.T01:intron 45.0%
TGCAACACTCTAAGTCTAGC+TGG - Chr7:69701044-69701063 MsG0780039847.01.T01:intron 45.0%
TGCTGAGCTATTAGGCTGAA+TGG - Chr7:69698608-69698627 MsG0780039847.01.T01:CDS 45.0%
TGGTCCTTTGTATGCTGGAT+TGG + Chr7:69698159-69698178 None:intergenic 45.0%
TTCATGTACCTCCTCCTCTT+GGG + Chr7:69699142-69699161 None:intergenic 45.0%
TTCCATGGTCCTTTGTATGC+TGG + Chr7:69698164-69698183 None:intergenic 45.0%
! ACCTCTTTAGCCTTTGGATC+AGG + Chr7:69697951-69697970 None:intergenic 45.0%
! GCTTGACCCTTGTTGTAACA+TGG - Chr7:69696497-69696516 MsG0780039847.01.T01:intron 45.0%
! GTTTGAAATTGTTCGGGGGT+GGG - Chr7:69700573-69700592 MsG0780039847.01.T01:intron 45.0%
! TGAAGTGTTTGCCAACAGAG+AGG - Chr7:69698743-69698762 MsG0780039847.01.T01:intron 45.0%
! TGCAGAGATGGCAAAGTGTT+TGG + Chr7:69696098-69696117 None:intergenic 45.0%
! TGTTTGAAATTGTTCGGGGG+TGG - Chr7:69700572-69700591 MsG0780039847.01.T01:intron 45.0%
!! GAAGCATTTTCCGCCATTTG+CGG + Chr7:69695033-69695052 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - Chr7:69697655-69697674 MsG0780039847.01.T01:CDS 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + Chr7:69697674-69697655 None:intergenic 45.0%
AAGAAAAGCCCAAGAGGAGG+AGG - Chr7:69699131-69699150 MsG0780039847.01.T01:intron 50.0%
AAGATGGATGGCGAAGTCGT+TGG - Chr7:69695671-69695690 MsG0780039847.01.T01:intron 50.0%
ACTGCAGGTCCTTCTTTACC+GGG + Chr7:69696706-69696725 None:intergenic 50.0%
AGATGGATGGCGAAGTCGTT+GGG - Chr7:69695672-69695691 MsG0780039847.01.T01:intron 50.0%
AGCTGTGTGCTTGAACGAAC+CGG + Chr7:69695731-69695750 None:intergenic 50.0%
CAAGAGAAGACGGTGAAAGG+CGG - Chr7:69699259-69699278 MsG0780039847.01.T01:intron 50.0%
CAAGAGATTGAGTGTGGTGG+AGG - Chr7:69696180-69696199 MsG0780039847.01.T01:intron 50.0%
CAAGCACACAGCTGGGAAAT+GGG - Chr7:69695738-69695757 MsG0780039847.01.T01:intron 50.0%
CACTGCAGGTCCTTCTTTAC+CGG + Chr7:69696707-69696726 None:intergenic 50.0%
CAGCAATGTTGACAAGGGCA+AGG - Chr7:69700860-69700879 MsG0780039847.01.T01:intron 50.0%
CCAGACCAGCAATGTTGACA+AGG - Chr7:69700854-69700873 MsG0780039847.01.T01:intron 50.0%
CCCTAATGCTGTCAAACCTG+AGG - Chr7:69697796-69697815 MsG0780039847.01.T01:intron 50.0%
CCTTGTCAACATTGCTGGTC+TGG + Chr7:69700857-69700876 None:intergenic 50.0%
CTACGACGTGCTGAGCTATT+AGG - Chr7:69698600-69698619 MsG0780039847.01.T01:CDS 50.0%
CTTGCCCTTGTCAACATTGC+TGG + Chr7:69700862-69700881 None:intergenic 50.0%
GAAAGGCGGAGAAAAGAGAG+AGG - Chr7:69699273-69699292 MsG0780039847.01.T01:intron 50.0%
GAGCAAGAGAAGACGGTGAA+AGG - Chr7:69699256-69699275 MsG0780039847.01.T01:intron 50.0%
GGCTAAGGACACACAAACTG+AGG - Chr7:69701065-69701084 MsG0780039847.01.T01:intron 50.0%
GGTTACATGAAGCTCCTCTC+TGG - Chr7:69696201-69696220 MsG0780039847.01.T01:intron 50.0%
GTCGTTGGGTAAGATCAGAC+TGG - Chr7:69695686-69695705 MsG0780039847.01.T01:intron 50.0%
GTTCATGTACCTCCTCCTCT+TGG + Chr7:69699143-69699162 None:intergenic 50.0%
GTTCGTTCAAGCACACAGCT+GGG - Chr7:69695731-69695750 MsG0780039847.01.T01:intron 50.0%
TCAAGCACACAGCTGGGAAA+TGG - Chr7:69695737-69695756 MsG0780039847.01.T01:intron 50.0%
TCCTCAAAGGCTAGGCCATT+TGG - Chr7:69700618-69700637 MsG0780039847.01.T01:CDS 50.0%
TGTCGGCATAGAAGTTTGGC+AGG - Chr7:69698508-69698527 MsG0780039847.01.T01:intron 50.0%
TTCTCTGTCGTCCCAATCTG+CGG + Chr7:69697765-69697784 None:intergenic 50.0%
! ACCAAATGGCCTAGCCTTTG+AGG + Chr7:69700622-69700641 None:intergenic 50.0%
!! GGAGGGAAAGCACTTGTAAG+TGG + Chr7:69699646-69699665 None:intergenic 50.0%
AACCACTCGGCTACGTCTAG+AGG - Chr7:69700002-69700021 MsG0780039847.01.T01:intron 55.0%
ATCCTCTAGACGTAGCCGAG+TGG + Chr7:69700007-69700026 None:intergenic 55.0%
CTATTCGCAGCCCGCAGATT+GGG - Chr7:69697751-69697770 MsG0780039847.01.T01:intron 55.0%
GGTTCGTTCAAGCACACAGC+TGG - Chr7:69695730-69695749 MsG0780039847.01.T01:intron 55.0%
TCTCTGTCGTCCCAATCTGC+GGG + Chr7:69697764-69697783 None:intergenic 55.0%
TTGGTGGGGATACGCCGTAT+AGG - Chr7:69696243-69696262 MsG0780039847.01.T01:intron 55.0%
! CAATCTGCGGGCTGCGAATA+GGG + Chr7:69697752-69697771 None:intergenic 55.0%
ATCGCGGCGATGCTGCACAT+AGG + Chr7:69699667-69699686 None:intergenic 60.0%
CACACAGCTGGGAAATGGGC+TGG - Chr7:69695742-69695761 MsG0780039847.01.T01:intron 60.0%
CCTATTCGCAGCCCGCAGAT+TGG - Chr7:69697750-69697769 MsG0780039847.01.T01:intron 60.0%
CGGCGATGCTGCACATAGGA+GGG + Chr7:69699663-69699682 None:intergenic 60.0%
CGTAGCCGAGTGGTTGAGCT+CGG + Chr7:69699997-69700016 None:intergenic 60.0%
GCAGCATCGCCGCGATTACA+TGG - Chr7:69699671-69699690 MsG0780039847.01.T01:CDS 60.0%
GGTGTCCGAGCTCAACCACT+CGG - Chr7:69699989-69700008 MsG0780039847.01.T01:intron 60.0%
! CCAATCTGCGGGCTGCGAAT+AGG + Chr7:69697753-69697772 None:intergenic 60.0%
GCGGCGATGCTGCACATAGG+AGG + Chr7:69699664-69699683 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 69695001 69701395 69695001 ID=MsG0780039847.01;Name=MsG0780039847.01
Chr7 mRNA 69695001 69701395 69695001 ID=MsG0780039847.01.T01;Parent=MsG0780039847.01;Name=MsG0780039847.01.T01;_AED=0.55;_eAED=0.59;_QI=58|0.66|0.69|0.92|0.33|0.46|13|0|445
Chr7 exon 69695001 69695333 69695001 ID=MsG0780039847.01.T01:exon:12740;Parent=MsG0780039847.01.T01
Chr7 exon 69696692 69696721 69696692 ID=MsG0780039847.01.T01:exon:12739;Parent=MsG0780039847.01.T01
Chr7 exon 69697058 69697150 69697058 ID=MsG0780039847.01.T01:exon:12738;Parent=MsG0780039847.01.T01
Chr7 exon 69697244 69697300 69697244 ID=MsG0780039847.01.T01:exon:12737;Parent=MsG0780039847.01.T01
Chr7 exon 69697632 69697724 69697632 ID=MsG0780039847.01.T01:exon:12736;Parent=MsG0780039847.01.T01
Chr7 exon 69697867 69697934 69697867 ID=MsG0780039847.01.T01:exon:12735;Parent=MsG0780039847.01.T01
Chr7 exon 69698039 69698096 69698039 ID=MsG0780039847.01.T01:exon:12734;Parent=MsG0780039847.01.T01
Chr7 exon 69698206 69698266 69698206 ID=MsG0780039847.01.T01:exon:12733;Parent=MsG0780039847.01.T01
Chr7 exon 69698428 69698475 69698428 ID=MsG0780039847.01.T01:exon:12732;Parent=MsG0780039847.01.T01
Chr7 exon 69698579 69698705 69698579 ID=MsG0780039847.01.T01:exon:12731;Parent=MsG0780039847.01.T01
Chr7 exon 69699572 69699754 69699572 ID=MsG0780039847.01.T01:exon:12730;Parent=MsG0780039847.01.T01
Chr7 exon 69700615 69700722 69700615 ID=MsG0780039847.01.T01:exon:12729;Parent=MsG0780039847.01.T01
Chr7 exon 69701259 69701395 69701259 ID=MsG0780039847.01.T01:exon:12728;Parent=MsG0780039847.01.T01
Chr7 five_prime_UTR 69701338 69701395 69701338 ID=MsG0780039847.01.T01:five_prime_utr;Parent=MsG0780039847.01.T01
Chr7 CDS 69701259 69701337 69701259 ID=MsG0780039847.01.T01:cds;Parent=MsG0780039847.01.T01
Chr7 CDS 69700615 69700722 69700615 ID=MsG0780039847.01.T01:cds;Parent=MsG0780039847.01.T01
Chr7 CDS 69699572 69699754 69699572 ID=MsG0780039847.01.T01:cds;Parent=MsG0780039847.01.T01
Chr7 CDS 69698579 69698705 69698579 ID=MsG0780039847.01.T01:cds;Parent=MsG0780039847.01.T01
Chr7 CDS 69698428 69698475 69698428 ID=MsG0780039847.01.T01:cds;Parent=MsG0780039847.01.T01
Chr7 CDS 69698206 69698266 69698206 ID=MsG0780039847.01.T01:cds;Parent=MsG0780039847.01.T01
Chr7 CDS 69698039 69698096 69698039 ID=MsG0780039847.01.T01:cds;Parent=MsG0780039847.01.T01
Chr7 CDS 69697867 69697934 69697867 ID=MsG0780039847.01.T01:cds;Parent=MsG0780039847.01.T01
Chr7 CDS 69697632 69697724 69697632 ID=MsG0780039847.01.T01:cds;Parent=MsG0780039847.01.T01
Chr7 CDS 69697244 69697300 69697244 ID=MsG0780039847.01.T01:cds;Parent=MsG0780039847.01.T01
Chr7 CDS 69697058 69697150 69697058 ID=MsG0780039847.01.T01:cds;Parent=MsG0780039847.01.T01
Chr7 CDS 69696692 69696721 69696692 ID=MsG0780039847.01.T01:cds;Parent=MsG0780039847.01.T01
Chr7 CDS 69695001 69695333 69695001 ID=MsG0780039847.01.T01:cds;Parent=MsG0780039847.01.T01
Gene Sequence

>MsG0780039847.01.T01

ATGAAGATGCTTGTGTTATTCTGTTTGTTGCTAATACAAGTTTCACTTTCTGAAGTCATCTTCGAAGAGCGTTTTGAAGATGGATGGCGAAGTCGTTGGGTAAGATCAGACTGGAAAAGTAGCGAAGGCAAAGCCGGTTCGTTCAAGCACACAGCTGGGAAATGGGCTGGAGATCCAGATGATAAAGATTTATGTGGAACAGACACAAAGAAGCTCCATGTCATAGTCTCTTACCAAGGTCAAAATTACCCGGTAAAGAAGGACCTGCAGTGTGAAACTGACAAGTTAACTCATTTCTACACATTCATTCTCAGACCAGATGCTACATACAGTGTTCTGGTTGATAATAGAGAGCGAGATTCGGAAGCCTGTCTCATTGTTGCGGTGTACTTTCTTTTATATAACTTGTATTTTGAATTAAAATTTCTCCCTATTCGCAGCCCGCAGATTGGGACGACAGAGAATACATTGAAGACCCTAATGCTGTCAAACCTGAGGGATATGATTCAATCCCAGCAGAAATTCCTGATCCAAAGGCTAAAGAGATGGAATATGGAAGAGGCCAAAGATACCAATCCAGCATACAAAGGACCATGGAAACGAAAGAAAATCAAGAATCCTAACTACAAAGGGAAATGGAAAACTCCATGGATTGATAATCCAGAGTTTGAAGATGACCCCGATCTTTATGTGCTTAAGCCTATCAAATATGTCGGCATAGAAGTTTGGCAGGTTAAAGGCGGTTCAGTATTTGACAACATTTTGATATGCGATGATCCTGAATATGCAAAACAAGTTGTTGATGAAGTGTTTGCCAACAGAGAGATTGAAAAAGAGGCTTTTGAGGAAGCAGAGAAAATAAGAAAAGCCCAAGAGGAGGAGGAGGCTCAAAGAGCAAGAGAAGACGGTGAAAGGCGGAGAAAAGAGAGAGGTTATGATCGACACCGTGACAGACATAGAGACAGATATAGAAAGCATCGCCGCGATTACATGGATGATTATCATCTGGCTAAGGACACACAAACTGAGGTTGCAACTCTACAAACTTCCAATGGTAAGATAATTGCCAATGAGAAACATGATTTCAGAGGTAAAACTAGTGAGAGTATCCAAGAGAACATGTTACAGAACAACAAAGGAAGTAGTAACAATAATAATGAGGCTGCTGATAAGAATATGGAGTGTGCTGCAACAGTAGAAAACTCTATTGAGTTAGTTGATTCGGTAGATACTAATTTATCAAATCTTCAACCAGAGATACCTTTTGCAGTAAGCAATTGCAATGTATTACAAAGTGTTCCCATTAGTGGTTGGATAGAGAGGATTCTATTTTATTGA
Protein sequence

>MsG0780039847.01.T01

MKMLVLFCLLLIQVSLSEVIFEERFEDGWRSRWVRSDWKSSEGKAGSFKHTAGKWAGDPDDKDLCGTDTKKLHVIVSYQGQNYPVKKDLQCETDKLTHFYTFILRPDATYSVLVDNRERDSEACLIVAVYFLLYNLYFELKFLPIRSPQIGTTENTLKTLMLSNLRDMIQSQQKFLIQRLKRWNMEEAKDTNPAYKGPWKRKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKGGSVFDNILICDDPEYAKQVVDEVFANREIEKEAFEEAEKIRKAQEEEEAQRAREDGERRRKERGYDRHRDRHRDRYRKHRRDYMDDYHLAKDTQTEVATLQTSNGKIIANEKHDFRGKTSESIQENMLQNNKGSSNNNNEAADKNMECAATVENSIELVDSVDTNLSNLQPEIPFAVSNCNVLQSVPISGWIERILFY*