Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008172.01.T01 | XP_013463392.1 | 91.928 | 446 | 17 | 1 | 1 | 446 | 66 | 492 | 0 | 833 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008172.01.T01 | A0A072VH05 | 91.928 | 446 | 17 | 1 | 1 | 446 | 66 | 492 | 0.0 | 833 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000221.01 | MsG0280008172.01 | 0.819244 | 1.285997e-52 | 9.842856e-50 |
MsG0180001119.01 | MsG0280008172.01 | 0.855335 | 6.760195e-62 | 1.555555e-58 |
MsG0180001120.01 | MsG0280008172.01 | 0.832915 | 7.195771e-56 | 8.158129e-53 |
MsG0180001590.01 | MsG0280008172.01 | 0.820768 | 5.761820e-53 | 4.601017e-50 |
MsG0180001591.01 | MsG0280008172.01 | 0.842721 | 2.174883e-58 | 3.326535e-55 |
MsG0180004112.01 | MsG0280008172.01 | 0.809728 | 1.639097e-50 | 9.698509e-48 |
MsG0180004277.01 | MsG0280008172.01 | 0.822239 | 2.634886e-53 | 2.192867e-50 |
MsG0180004898.01 | MsG0280008172.01 | 0.819141 | 1.357186e-52 | 1.035748e-49 |
MsG0180004988.01 | MsG0280008172.01 | 0.811552 | 6.611886e-51 | 4.105176e-48 |
MsG0180005625.01 | MsG0280008172.01 | 0.805720 | 1.164703e-49 | 6.207181e-47 |
MsG0180005639.01 | MsG0280008172.01 | 0.888111 | 7.882855e-73 | 6.024103e-69 |
MsG0180005687.01 | MsG0280008172.01 | 0.815034 | 1.136465e-51 | 7.749367e-49 |
MsG0180005729.01 | MsG0280008172.01 | 0.820484 | 6.694628e-53 | 5.303783e-50 |
MsG0180005731.01 | MsG0280008172.01 | 0.817705 | 2.871619e-52 | 2.106600e-49 |
MsG0180006054.01 | MsG0280008172.01 | 0.810778 | 9.730303e-51 | 5.918975e-48 |
MsG0280006552.01 | MsG0280008172.01 | 0.845937 | 2.972965e-59 | 5.035324e-56 |
MsG0280007877.01 | MsG0280008172.01 | 0.816607 | 5.068830e-52 | 3.608342e-49 |
MsG0280008165.01 | MsG0280008172.01 | 0.881809 | 1.762601e-70 | 1.047388e-66 |
MsG0280008171.01 | MsG0280008172.01 | 0.893382 | 6.623898e-75 | 6.294356e-71 |
MsG0280008172.01 | MsG0280009901.01 | 0.817976 | 2.493912e-52 | 1.843117e-49 |
MsG0280008172.01 | MsG0280010218.01 | 0.832434 | 9.476994e-56 | 1.059097e-52 |
MsG0280008172.01 | MsG0280011404.01 | 0.809629 | 1.721422e-50 | 1.015937e-47 |
MsG0280008172.01 | MsG0380012357.01 | 0.818354 | 2.047829e-52 | 1.529433e-49 |
MsG0280008172.01 | MsG0380014333.01 | 0.811461 | 6.919453e-51 | 4.285863e-48 |
MsG0280008172.01 | MsG0380015486.01 | 0.818400 | 1.999055e-52 | 1.494945e-49 |
MsG0280008172.01 | MsG0380015735.01 | 0.829764 | 4.287482e-55 | 4.430773e-52 |
MsG0280008172.01 | MsG0480018226.01 | 0.823805 | 1.136475e-53 | 9.888307e-51 |
MsG0280008172.01 | MsG0480018253.01 | 0.818855 | 1.576596e-52 | 1.193871e-49 |
MsG0280008172.01 | MsG0480018670.01 | 0.814875 | 1.233013e-51 | 8.371060e-49 |
MsG0280008172.01 | MsG0480018683.01 | 0.803991 | 2.675793e-49 | 1.363972e-46 |
MsG0280008172.01 | MsG0480019065.01 | 0.837001 | 6.725366e-57 | 8.620419e-54 |
MsG0280008172.01 | MsG0480019083.01 | 0.813812 | 2.118175e-51 | 1.397376e-48 |
MsG0280008172.01 | MsG0480020433.01 | 0.827678 | 1.370188e-54 | 1.332017e-51 |
MsG0280008172.01 | MsG0480021763.01 | 0.809470 | 1.862258e-50 | 1.094310e-47 |
MsG0280008172.01 | MsG0480022535.01 | 0.828549 | 8.453332e-55 | 8.429469e-52 |
MsG0280008172.01 | MsG0480022572.01 | 0.827847 | 1.247459e-54 | 1.218752e-51 |
MsG0280008172.01 | MsG0480022579.01 | 0.807468 | 4.980961e-50 | 2.776605e-47 |
MsG0280008172.01 | MsG0480023498.01 | 0.807428 | 5.080049e-50 | 2.828774e-47 |
MsG0280008172.01 | MsG0580024340.01 | 0.802122 | 6.517525e-49 | 3.166944e-46 |
MsG0280008172.01 | MsG0580024447.01 | 0.828781 | 7.426401e-55 | 7.455105e-52 |
MsG0280008172.01 | MsG0580024975.01 | 0.846938 | 1.585568e-59 | 2.773316e-56 |
MsG0280008172.01 | MsG0580025226.01 | 0.806136 | 9.523978e-50 | 5.129733e-47 |
MsG0280008172.01 | MsG0580025827.01 | 0.812530 | 4.048163e-51 | 2.580210e-48 |
MsG0280008172.01 | MsG0580025841.01 | 0.818850 | 1.580338e-52 | 1.196549e-49 |
MsG0280008172.01 | MsG0580027348.01 | 0.804674 | 1.928389e-49 | 1.000358e-46 |
MsG0280008172.01 | MsG0580027789.01 | 0.833555 | 4.987024e-56 | 5.763404e-53 |
MsG0280008172.01 | MsG0580028140.01 | 0.839941 | 1.172267e-57 | 1.644323e-54 |
MsG0280008172.01 | MsG0580029394.01 | 0.807141 | 5.841740e-50 | 3.228685e-47 |
MsG0280008172.01 | MsG0580030071.01 | 0.834059 | 3.730712e-56 | 4.377123e-53 |
MsG0280008172.01 | MsG0680030566.01 | -0.800916 | 1.151215e-48 | 5.426041e-46 |
MsG0280008172.01 | MsG0680030599.01 | 0.808063 | 3.722559e-50 | 2.107545e-47 |
MsG0280008172.01 | MsG0680030907.01 | 0.828805 | 7.328333e-55 | 7.361996e-52 |
MsG0280008172.01 | MsG0680031996.01 | 0.849798 | 2.565562e-60 | 4.920902e-57 |
MsG0280008172.01 | MsG0680031998.01 | 0.834736 | 2.522097e-56 | 3.019438e-53 |
MsG0280008172.01 | MsG0680032264.01 | 0.816493 | 5.374923e-52 | 3.814086e-49 |
MsG0280008172.01 | MsG0680032272.01 | 0.806735 | 7.120791e-50 | 3.894484e-47 |
MsG0280008172.01 | MsG0680032275.01 | 0.801926 | 7.149843e-49 | 3.456936e-46 |
MsG0280008172.01 | MsG0680032279.01 | 0.834897 | 2.298155e-56 | 2.764901e-53 |
MsG0280008172.01 | MsG0680032305.01 | 0.813528 | 2.446093e-51 | 1.601371e-48 |
MsG0280008172.01 | MsG0680033447.01 | 0.856984 | 2.221949e-62 | 5.400367e-59 |
MsG0280008172.01 | MsG0680034028.01 | 0.800180 | 1.626658e-48 | 7.524564e-46 |
MsG0280008172.01 | MsG0680034032.01 | 0.810233 | 1.276213e-50 | 7.651288e-48 |
MsG0280008172.01 | MsG0680034769.01 | 0.840596 | 7.906324e-58 | 1.131670e-54 |
MsG0280008172.01 | MsG0780036116.01 | 0.820614 | 6.248876e-53 | 4.968309e-50 |
MsG0280008172.01 | MsG0780036126.01 | 0.806114 | 9.624643e-50 | 5.181104e-47 |
MsG0280008172.01 | MsG0780036182.01 | 0.813522 | 2.452604e-51 | 1.605372e-48 |
MsG0280008172.01 | MsG0780036509.01 | 0.850587 | 1.541984e-60 | 3.035177e-57 |
MsG0280008172.01 | MsG0780036620.01 | 0.819269 | 1.268934e-52 | 9.718866e-50 |
MsG0280008172.01 | MsG0780036624.01 | 0.817405 | 3.354059e-52 | 2.440459e-49 |
MsG0280008172.01 | MsG0780039432.01 | 0.838533 | 2.717690e-57 | 3.650649e-54 |
MsG0280008172.01 | MsG0780039847.01 | 0.819874 | 9.234384e-53 | 7.193231e-50 |
MsG0280008172.01 | MsG0780040235.01 | 0.813808 | 2.121816e-51 | 1.399652e-48 |
MsG0280008172.01 | MsG0780041742.01 | 0.820184 | 7.844460e-53 | 6.163604e-50 |
MsG0280008172.01 | MsG0880044876.01 | 0.804451 | 2.146931e-49 | 1.107309e-46 |
MsG0280008172.01 | MsG0880045094.01 | 0.814883 | 1.228057e-51 | 8.339339e-49 |
MsG0280008172.01 | MsG0880045402.01 | 0.812191 | 4.800991e-51 | 3.032376e-48 |
MsG0280008172.01 | MsG0880045624.01 | 0.823627 | 1.251271e-53 | 1.083197e-50 |
MsG0280008172.01 | MsG0880045771.01 | 0.801661 | 8.104669e-49 | 3.892251e-46 |
MsG0280008172.01 | MsG0880045929.01 | 0.808360 | 3.218013e-50 | 1.836329e-47 |
MsG0280008172.01 | MsG0880046200.01 | 0.810210 | 1.290763e-50 | 7.733665e-48 |
MsG0280008172.01 | MsG0880047401.01 | 0.874786 | 5.144025e-68 | 2.345738e-64 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008172.01.T01 | MTR_2g438760 | 91.928 | 446 | 17 | 1 | 1 | 446 | 66 | 492 | 0.0 | 833 |
MsG0280008172.01.T01 | MTR_2g438740 | 49.103 | 446 | 220 | 2 | 1 | 446 | 60 | 498 | 7.61e-146 | 429 |
MsG0280008172.01.T01 | MTR_2g438400 | 46.827 | 457 | 238 | 4 | 1 | 455 | 32 | 485 | 2.49e-143 | 422 |
MsG0280008172.01.T01 | MTR_2g438440 | 46.389 | 457 | 240 | 4 | 1 | 455 | 173 | 626 | 4.28e-140 | 419 |
MsG0280008172.01.T01 | MTR_2g438700 | 46.993 | 449 | 232 | 5 | 1 | 446 | 176 | 621 | 2.25e-138 | 415 |
MsG0280008172.01.T01 | MTR_2g438720 | 47.216 | 449 | 231 | 5 | 1 | 446 | 178 | 623 | 1.68e-137 | 412 |
MsG0280008172.01.T01 | MTR_2g438640 | 46.429 | 448 | 235 | 5 | 1 | 446 | 178 | 622 | 1.81e-135 | 407 |
MsG0280008172.01.T01 | MTR_2g438640 | 44.420 | 448 | 218 | 6 | 1 | 446 | 178 | 596 | 4.08e-122 | 372 |
MsG0280008172.01.T01 | MTR_2g438470 | 40.957 | 376 | 184 | 5 | 28 | 402 | 160 | 498 | 1.76e-89 | 282 |
MsG0280008172.01.T01 | MTR_5g028190 | 31.670 | 461 | 289 | 11 | 19 | 456 | 17 | 474 | 5.56e-68 | 227 |
MsG0280008172.01.T01 | MTR_1g113820 | 29.519 | 437 | 272 | 7 | 9 | 437 | 79 | 487 | 6.59e-49 | 177 |
MsG0280008172.01.T01 | MTR_1g113760 | 28.409 | 440 | 272 | 8 | 9 | 437 | 46 | 453 | 1.38e-47 | 172 |
MsG0280008172.01.T01 | MTR_2g438640 | 41.518 | 224 | 127 | 4 | 1 | 222 | 178 | 399 | 3.28e-46 | 170 |
MsG0280008172.01.T01 | MTR_2g438640 | 48.361 | 122 | 62 | 1 | 325 | 446 | 399 | 519 | 2.87e-30 | 124 |
MsG0280008172.01.T01 | MTR_3g055310 | 29.126 | 412 | 248 | 8 | 71 | 443 | 11 | 417 | 3.87e-46 | 167 |
MsG0280008172.01.T01 | MTR_3g055310 | 29.064 | 406 | 241 | 9 | 80 | 443 | 15 | 415 | 1.94e-44 | 163 |
MsG0280008172.01.T01 | MTR_3g055310 | 29.064 | 406 | 241 | 9 | 80 | 443 | 42 | 442 | 2.99e-44 | 163 |
MsG0280008172.01.T01 | MTR_5g028450 | 37.963 | 216 | 134 | 0 | 231 | 446 | 8 | 223 | 2.03e-43 | 155 |
MsG0280008172.01.T01 | MTR_5g091220 | 28.395 | 486 | 299 | 9 | 2 | 443 | 50 | 530 | 4.19e-42 | 158 |
MsG0280008172.01.T01 | MTR_3g055310 | 29.462 | 353 | 211 | 6 | 124 | 443 | 42 | 389 | 8.17e-41 | 152 |
MsG0280008172.01.T01 | MTR_5g028130 | 34.615 | 234 | 147 | 3 | 227 | 455 | 45 | 277 | 9.62e-41 | 149 |
MsG0280008172.01.T01 | MTR_3g055310 | 35.294 | 221 | 141 | 1 | 223 | 443 | 56 | 274 | 8.05e-39 | 144 |
MsG0280008172.01.T01 | MTR_3g455790 | 26.180 | 466 | 306 | 8 | 1 | 431 | 51 | 513 | 9.62e-39 | 149 |
MsG0280008172.01.T01 | MTR_3g055310 | 35.294 | 221 | 141 | 1 | 223 | 443 | 119 | 337 | 1.87e-38 | 145 |
MsG0280008172.01.T01 | MTR_3g452020 | 25.541 | 462 | 307 | 6 | 2 | 428 | 52 | 511 | 2.05e-35 | 139 |
MsG0280008172.01.T01 | MTR_5g028930 | 32.727 | 220 | 146 | 2 | 227 | 445 | 324 | 542 | 9.43e-31 | 126 |
MsG0280008172.01.T01 | MTR_2g020450 | 29.412 | 221 | 148 | 3 | 227 | 444 | 396 | 611 | 1.13e-27 | 117 |
MsG0280008172.01.T01 | MTR_2g020450 | 33.721 | 172 | 103 | 3 | 3 | 164 | 26 | 196 | 9.43e-16 | 80.5 |
MsG0280008172.01.T01 | MTR_3g452020 | 25.223 | 337 | 221 | 4 | 121 | 428 | 1 | 335 | 7.00e-27 | 112 |
MsG0280008172.01.T01 | MTR_2g020510 | 30.455 | 220 | 146 | 2 | 227 | 443 | 393 | 608 | 9.15e-27 | 114 |
MsG0280008172.01.T01 | MTR_2g020510 | 32.558 | 172 | 105 | 3 | 3 | 164 | 26 | 196 | 1.53e-14 | 76.6 |
MsG0280008172.01.T01 | MTR_3g058570 | 29.870 | 231 | 152 | 4 | 213 | 436 | 73 | 300 | 5.50e-25 | 106 |
MsG0280008172.01.T01 | MTR_5g085340 | 31.019 | 216 | 142 | 2 | 227 | 436 | 446 | 660 | 8.94e-24 | 105 |
MsG0280008172.01.T01 | MTR_5g085350 | 29.439 | 214 | 146 | 2 | 227 | 436 | 440 | 652 | 2.98e-22 | 100 |
MsG0280008172.01.T01 | MTR_5g085350 | 29.439 | 214 | 146 | 2 | 227 | 436 | 427 | 639 | 3.10e-22 | 100 |
MsG0280008172.01.T01 | MTR_2g017930 | 32.039 | 206 | 128 | 4 | 244 | 446 | 379 | 575 | 8.43e-22 | 99.4 |
MsG0280008172.01.T01 | MTR_2g020470 | 27.273 | 220 | 133 | 3 | 227 | 443 | 395 | 590 | 1.01e-19 | 92.8 |
MsG0280008172.01.T01 | MTR_2g020470 | 29.255 | 188 | 122 | 3 | 3 | 180 | 26 | 212 | 2.89e-12 | 69.3 |
MsG0280008172.01.T01 | MTR_2g438580 | 47.368 | 76 | 39 | 1 | 339 | 414 | 2 | 76 | 2.11e-19 | 83.2 |
MsG0280008172.01.T01 | MTR_1g113730 | 29.741 | 232 | 148 | 8 | 214 | 437 | 33 | 257 | 3.91e-19 | 89.4 |
MsG0280008172.01.T01 | MTR_5g028690 | 33.594 | 128 | 85 | 0 | 318 | 445 | 34 | 161 | 4.04e-19 | 87.0 |
MsG0280008172.01.T01 | MTR_3g051060 | 28.505 | 214 | 149 | 3 | 246 | 456 | 456 | 668 | 1.06e-18 | 89.7 |
MsG0280008172.01.T01 | MTR_3g050500 | 26.761 | 213 | 147 | 5 | 246 | 453 | 450 | 658 | 7.74e-18 | 87.0 |
MsG0280008172.01.T01 | MTR_6g017215 | 33.588 | 131 | 87 | 0 | 325 | 455 | 6 | 136 | 1.43e-17 | 82.4 |
MsG0280008172.01.T01 | MTR_5g028110 | 31.579 | 133 | 73 | 1 | 325 | 457 | 2 | 116 | 2.71e-17 | 80.1 |
MsG0280008172.01.T01 | MTR_5g085360 | 30.189 | 159 | 104 | 3 | 281 | 436 | 497 | 651 | 1.77e-15 | 79.7 |
MsG0280008172.01.T01 | MTR_5g028840 | 31.092 | 119 | 82 | 0 | 325 | 443 | 2 | 120 | 4.26e-13 | 68.6 |
MsG0280008172.01.T01 | MTR_5g028900 | 29.921 | 127 | 75 | 2 | 327 | 453 | 4 | 116 | 5.82e-12 | 64.3 |
MsG0280008172.01.T01 | MTR_3g055750 | 22.985 | 335 | 243 | 6 | 2 | 325 | 52 | 382 | 8.29e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008172.01.T01 | AT3G18670 | 31.373 | 459 | 289 | 9 | 2 | 446 | 69 | 515 | 1.81e-70 | 235 |
MsG0280008172.01.T01 | AT3G18670 | 29.167 | 504 | 296 | 10 | 2 | 446 | 69 | 570 | 3.54e-66 | 225 |
MsG0280008172.01.T01 | AT5G35810 | 41.732 | 254 | 141 | 3 | 196 | 443 | 8 | 260 | 5.51e-61 | 203 |
MsG0280008172.01.T01 | AT5G04690 | 31.358 | 405 | 256 | 10 | 48 | 439 | 143 | 538 | 8.12e-49 | 177 |
MsG0280008172.01.T01 | AT5G04700 | 29.274 | 468 | 285 | 12 | 17 | 439 | 114 | 580 | 1.95e-47 | 174 |
MsG0280008172.01.T01 | AT5G04690 | 30.206 | 437 | 253 | 11 | 48 | 439 | 143 | 572 | 2.99e-45 | 168 |
MsG0280008172.01.T01 | AT5G04690 | 29.724 | 434 | 245 | 11 | 48 | 439 | 143 | 558 | 1.92e-44 | 165 |
MsG0280008172.01.T01 | AT5G04730 | 27.646 | 463 | 271 | 10 | 35 | 439 | 58 | 514 | 6.75e-42 | 158 |
MsG0280008172.01.T01 | AT5G04680 | 28.894 | 443 | 263 | 12 | 48 | 439 | 12 | 453 | 8.11e-42 | 157 |
MsG0280008172.01.T01 | AT5G04680 | 28.894 | 443 | 263 | 12 | 48 | 439 | 135 | 576 | 1.78e-41 | 157 |
MsG0280008172.01.T01 | AT5G04680 | 28.409 | 440 | 255 | 12 | 48 | 439 | 135 | 562 | 3.06e-40 | 154 |
MsG0280008172.01.T01 | AT5G04680 | 32.143 | 224 | 141 | 3 | 227 | 439 | 382 | 605 | 1.96e-31 | 128 |
MsG0280008172.01.T01 | AT3G54065 | 43.165 | 139 | 73 | 2 | 311 | 443 | 8 | 146 | 2.35e-27 | 110 |
MsG0280008172.01.T01 | AT5G35830 | 41.667 | 120 | 69 | 1 | 13 | 131 | 118 | 237 | 7.21e-21 | 92.8 |
MsG0280008172.01.T01 | AT1G34050 | 25.390 | 449 | 264 | 18 | 18 | 434 | 55 | 464 | 4.79e-12 | 68.6 |
Find 64 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGAACTTGTTAGATGTCTT+TGG | 0.191053 | 2:+26733619 | MsG0280008172.01.T01:CDS |
GAAGAGCACAAGTCCATTTC+TGG | 0.204770 | 2:+26733599 | MsG0280008172.01.T01:CDS |
GGAACTTGTTAGATGTCTTT+GGG | 0.248529 | 2:+26733620 | MsG0280008172.01.T01:CDS |
AGGAATGACCCCTCTTACTA+TGG | 0.258797 | 2:+26731428 | MsG0280008172.01.T01:CDS |
GGTCTGAACCTGATTTAATA+AGG | 0.275713 | 2:+26733760 | MsG0280008172.01.T01:CDS |
ATTACTTGACTCAAAAGATT+TGG | 0.283267 | 2:+26731287 | MsG0280008172.01.T01:CDS |
CAGTTCAGTTTGAAATAGTT+TGG | 0.292530 | 2:+26733220 | MsG0280008172.01.T01:CDS |
CTGTCTCCTTGTTCATATTT+CGG | 0.292695 | 2:-26731932 | None:intergenic |
TGGAAATGAGTGTTGAAATT+AGG | 0.300644 | 2:-26734725 | None:intergenic |
TTGTGCTTAGCTGCTGTATC+TGG | 0.304673 | 2:+26731339 | MsG0280008172.01.T01:CDS |
TTGGAACTACAAAACAATAA+AGG | 0.331416 | 2:+26731306 | MsG0280008172.01.T01:CDS |
TCAATATAATAACAATTTGT+AGG | 0.331722 | 2:-26731365 | None:intergenic |
AAATGACACATGAAATACTA+TGG | 0.337385 | 2:+26733985 | MsG0280008172.01.T01:CDS |
TCTCAACTTAACTTAATATC+AGG | 0.346472 | 2:+26733951 | MsG0280008172.01.T01:CDS |
TCCACATCCCTTATTAAATC+AGG | 0.349899 | 2:-26733768 | None:intergenic |
GCTGCAATAACAAAGGATTA+TGG | 0.370183 | 2:+26731204 | MsG0280008172.01.T01:CDS |
TTTAGTCTAATACATGAGTT+AGG | 0.380843 | 2:+26733846 | MsG0280008172.01.T01:CDS |
ACATTTGATGCTACAAAAGT+TGG | 0.388589 | 2:+26733708 | MsG0280008172.01.T01:CDS |
TGCATCAACAATGATTTGTA+TGG | 0.395835 | 2:+26731546 | MsG0280008172.01.T01:CDS |
TCCTCAGCAAATATCTCATC+AGG | 0.397401 | 2:-26734642 | None:intergenic |
CCTTTGTTATTGCAGCGTTT+AGG | 0.409812 | 2:-26731197 | None:intergenic |
TGGAACTACAAAACAATAAA+GGG | 0.421879 | 2:+26731307 | MsG0280008172.01.T01:CDS |
CAGCCATACAGTAGACATAT+TGG | 0.433950 | 2:+26731491 | MsG0280008172.01.T01:CDS |
CATCTAACAAGTTCCAGAAA+TGG | 0.446457 | 2:-26733612 | None:intergenic |
TGGGGCATACTTCTCAATCA+TGG | 0.455534 | 2:+26733639 | MsG0280008172.01.T01:CDS |
GGAGACAGGCTTACATATCT+TGG | 0.470787 | 2:+26731947 | MsG0280008172.01.T01:CDS |
CAGCAATGTGAAATATGCTT+CGG | 0.476131 | 2:-26733800 | None:intergenic |
CTTCCAATATGTCTACTGTA+TGG | 0.477785 | 2:-26731494 | None:intergenic |
TTTCTTCTTTATTTCTATTG+GGG | 0.487413 | 2:-26734601 | None:intergenic |
TGGATATGCTGTTTATAAGT+AGG | 0.492825 | 2:-26735444 | None:intergenic |
ATTTCAACACTCATTTCCAC+TGG | 0.495892 | 2:+26734729 | MsG0280008172.01.T01:CDS |
GTCTGAACCTGATTTAATAA+GGG | 0.510014 | 2:+26733761 | MsG0280008172.01.T01:CDS |
CGAAATATGAACAAGGAGAC+AGG | 0.510389 | 2:+26731933 | MsG0280008172.01.T01:CDS |
ACAAATCATTGTTGATGCAA+AGG | 0.521580 | 2:-26731542 | None:intergenic |
ATTAAGTTAAGTTGAGAAGG+AGG | 0.522204 | 2:-26733945 | None:intergenic |
CCTTGAGCACCTCGAATATG+TGG | 0.531423 | 2:-26731408 | None:intergenic |
CCACATATTCGAGGTGCTCA+AGG | 0.533805 | 2:+26731408 | MsG0280008172.01.T01:CDS |
TATTAACAAAAGCAGAATCA+TGG | 0.535478 | 2:+26734676 | MsG0280008172.01.T01:CDS |
ACATATTGGAAGAGGAGGAA+TGG | 0.535583 | 2:+26731505 | MsG0280008172.01.T01:CDS |
AAAACAGTCAACACTGGCAT+TGG | 0.536607 | 2:+26731908 | MsG0280008172.01.T01:CDS |
GATATTAAGTTAAGTTGAGA+AGG | 0.539288 | 2:-26733948 | None:intergenic |
ACAGCATATCCATCATGCTC+AGG | 0.544484 | 2:+26735455 | MsG0280008172.01.T01:CDS |
TACAGTAGACATATTGGAAG+AGG | 0.544937 | 2:+26731497 | MsG0280008172.01.T01:CDS |
AGATTCAATTATAGATCTTG+AGG | 0.546456 | 2:+26733878 | MsG0280008172.01.T01:CDS |
ACATGAAATACTATGGTTTG+AGG | 0.547148 | 2:+26733992 | MsG0280008172.01.T01:CDS |
ACAGCAACATTTAACATACC+TGG | 0.552645 | 2:+26734759 | MsG0280008172.01.T01:CDS |
ACCTGATTTAATAAGGGATG+TGG | 0.556513 | 2:+26733767 | MsG0280008172.01.T01:CDS |
GAACTTGTTAGATGTCTTTG+GGG | 0.568188 | 2:+26733621 | MsG0280008172.01.T01:CDS |
CAAAGAGCTGACTTGTGAGG+TGG | 0.571385 | 2:+26735413 | MsG0280008172.01.T01:CDS |
AAAGACTTACTAAGATCAGA+AGG | 0.584008 | 2:-26731978 | None:intergenic |
AAAGAGCTGACTTGTGAGGT+GGG | 0.590047 | 2:+26735414 | MsG0280008172.01.T01:CDS |
AGTAGACATATTGGAAGAGG+AGG | 0.604673 | 2:+26731500 | MsG0280008172.01.T01:CDS |
ATATTCAGTCCTGAGCATGA+TGG | 0.607326 | 2:-26735464 | None:intergenic |
CCTCAGCAAATATCTCATCA+GGG | 0.616983 | 2:-26734641 | None:intergenic |
CCTAAACGCTGCAATAACAA+AGG | 0.620975 | 2:+26731197 | MsG0280008172.01.T01:CDS |
GGATGTCTACCACATATTCG+AGG | 0.624828 | 2:+26731399 | MsG0280008172.01.T01:CDS |
CCCTGATGAGATATTTGCTG+AGG | 0.633358 | 2:+26734641 | MsG0280008172.01.T01:CDS |
TCACAAAGAGCTGACTTGTG+AGG | 0.639028 | 2:+26735410 | MsG0280008172.01.T01:CDS |
AAAAGCAGCCATAGTAAGAG+GGG | 0.640611 | 2:-26731436 | None:intergenic |
TGTTGCTGTAAATACTCCAG+TGG | 0.647306 | 2:-26734745 | None:intergenic |
CTCAGCAAATATCTCATCAG+GGG | 0.651182 | 2:-26734640 | None:intergenic |
ATGGATGTACAGAAACACAT+AGG | 0.663164 | 2:+26733658 | MsG0280008172.01.T01:CDS |
ATTGGTCCGAAATATGAACA+AGG | 0.697800 | 2:+26731926 | MsG0280008172.01.T01:CDS |
GCAACATTTAACATACCTGG+TGG | 0.715981 | 2:+26734762 | MsG0280008172.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATAATTTATATAAGGAT+CGG | - | Chr2:26734550-26734569 | None:intergenic | 10.0% |
!! | GTCAAAATATAATTTATATA+AGG | - | Chr2:26734555-26734574 | None:intergenic | 10.0% |
!!! | AGAAACTATATTAATTTTAT+AGG | + | Chr2:26733483-26733502 | MsG0280008172.01.T01:intron | 10.0% |
!!! | TCAATTTTCAAATATTTTAT+TGG | - | Chr2:26732147-26732166 | None:intergenic | 10.0% |
!!! | TTTTGTCAAAAAAAAAAAAA+AGG | + | Chr2:26732735-26732754 | MsG0280008172.01.T01:intron | 10.0% |
!! | AAAAAAAAAAAAAAGGTTTG+AGG | + | Chr2:26732742-26732761 | MsG0280008172.01.T01:intron | 15.0% |
!! | AATTATAAGAATTTGATCAA+TGG | - | Chr2:26732090-26732109 | None:intergenic | 15.0% |
!! | ATTATTATTAAGATATACTC+CGG | + | Chr2:26732478-26732497 | MsG0280008172.01.T01:intron | 15.0% |
!! | TATTCAATATATCTAAAAAG+TGG | - | Chr2:26732524-26732543 | None:intergenic | 15.0% |
!! | TCAAAATAAAAAATAACACT+AGG | - | Chr2:26734482-26734501 | None:intergenic | 15.0% |
!! | TCAATATAATAACAATTTGT+AGG | - | Chr2:26731368-26731387 | None:intergenic | 15.0% |
!!! | AAATTATATTTTGACATTGT+AGG | + | Chr2:26734560-26734579 | MsG0280008172.01.T01:intron | 15.0% |
!!! | GAATGTTTCAATAATTATTT+TGG | + | Chr2:26732364-26732383 | MsG0280008172.01.T01:intron | 15.0% |
!!! | TTAAATGCTCTTTATTTTTT+TGG | + | Chr2:26732439-26732458 | MsG0280008172.01.T01:intron | 15.0% |
!!! | TTTTCTTCTTTATTTCTATT+GGG | - | Chr2:26734605-26734624 | None:intergenic | 15.0% |
!!! | TTTTTCTTCTTTATTTCTAT+TGG | - | Chr2:26734606-26734625 | None:intergenic | 15.0% |
!! | ACATACAAAAATAAGAAGAT+CGG | - | Chr2:26735145-26735164 | None:intergenic | 20.0% |
!! | ACTCAGTATATTACTTTATT+AGG | + | Chr2:26734456-26734475 | MsG0280008172.01.T01:intron | 20.0% |
!! | AGAACTTTGAATAAAACTAT+AGG | - | Chr2:26735095-26735114 | None:intergenic | 20.0% |
!! | ATGGAAATATGTTATGAAAA+AGG | - | Chr2:26735024-26735043 | None:intergenic | 20.0% |
!! | ATTATATTGACCAAGAAAAA+TGG | + | Chr2:26731378-26731397 | MsG0280008172.01.T01:CDS | 20.0% |
!! | GATATTATATGACATATGTA+TGG | - | Chr2:26734037-26734056 | None:intergenic | 20.0% |
!! | GCAAAAACAGAAATAAAATA+TGG | - | Chr2:26735065-26735084 | None:intergenic | 20.0% |
!! | TATTCAATGTATCTAAAAAG+TGG | + | Chr2:26732585-26732604 | MsG0280008172.01.T01:intron | 20.0% |
!! | TGTCTATATTAGTTATTCAT+AGG | - | Chr2:26734059-26734078 | None:intergenic | 20.0% |
!!! | AAAACCTACTGTTTTTTTTT+GGG | + | Chr2:26733458-26733477 | MsG0280008172.01.T01:intron | 20.0% |
!!! | ATAATTTTTTATGCCTTCAA+TGG | + | Chr2:26732104-26732123 | MsG0280008172.01.T01:intron | 20.0% |
!!! | ATGTATCTAGTCTTTATTAT+AGG | - | Chr2:26732561-26732580 | None:intergenic | 20.0% |
!!! | CAGTTAATTACTAGTTTTTT+TGG | + | Chr2:26734308-26734327 | MsG0280008172.01.T01:intron | 20.0% |
!!! | CTTAGTTTTCTAAATAAACA+TGG | - | Chr2:26732013-26732032 | None:intergenic | 20.0% |
!!! | GAATGTTTCAATCATTATTT+TGG | - | Chr2:26732680-26732699 | None:intergenic | 20.0% |
!!! | TAATTTTTTATGCCTTCAAT+GGG | + | Chr2:26732105-26732124 | MsG0280008172.01.T01:intron | 20.0% |
!!! | TCACAAAAAATTATTTTCCT+TGG | - | Chr2:26733356-26733375 | None:intergenic | 20.0% |
!!! | TGGTTTTTGTCAAAAAAAAA+AGG | - | Chr2:26732313-26732332 | None:intergenic | 20.0% |
!!! | TTCTAAAATTCGATTTCATT+TGG | + | Chr2:26733158-26733177 | MsG0280008172.01.T01:intron | 20.0% |
!!! | TTTCTTCTTTATTTCTATTG+GGG | - | Chr2:26734604-26734623 | None:intergenic | 20.0% |
!!! | TTTTTCATAACATATTTCCA+TGG | + | Chr2:26735023-26735042 | MsG0280008172.01.T01:intron | 20.0% |
!!! | TTTTTGAAAAATGACCATTA+TGG | - | Chr2:26733385-26733404 | None:intergenic | 20.0% |
! | AAACATATTTAACCCATTGA+AGG | - | Chr2:26732120-26732139 | None:intergenic | 25.0% |
! | AAACTAGTAATTAACTGAGT+TGG | - | Chr2:26734305-26734324 | None:intergenic | 25.0% |
! | AAATGACACATGAAATACTA+TGG | + | Chr2:26733985-26734004 | MsG0280008172.01.T01:CDS | 25.0% |
! | AACTAGTAATTAACTGAGTT+GGG | - | Chr2:26734304-26734323 | None:intergenic | 25.0% |
! | AGATTCAATTATAGATCTTG+AGG | + | Chr2:26733878-26733897 | MsG0280008172.01.T01:CDS | 25.0% |
! | ATTACTTGACTCAAAAGATT+TGG | + | Chr2:26731287-26731306 | MsG0280008172.01.T01:CDS | 25.0% |
! | CAGAATTGTTAGTAATGATT+CGG | - | Chr2:26733056-26733075 | None:intergenic | 25.0% |
! | GGGAGGAATAATAATAATTA+TGG | - | Chr2:26731822-26731841 | None:intergenic | 25.0% |
! | TAGTTCATGATTTATCAGTA+TGG | + | Chr2:26733105-26733124 | MsG0280008172.01.T01:intron | 25.0% |
! | TATGAAATCTTCTTGAATGA+TGG | + | Chr2:26735256-26735275 | MsG0280008172.01.T01:intron | 25.0% |
! | TATTAACAAAAGCAGAATCA+TGG | + | Chr2:26734676-26734695 | MsG0280008172.01.T01:CDS | 25.0% |
! | TCTCAACTTAACTTAATATC+AGG | + | Chr2:26733951-26733970 | MsG0280008172.01.T01:CDS | 25.0% |
! | TGGAACTACAAAACAATAAA+GGG | + | Chr2:26731307-26731326 | MsG0280008172.01.T01:CDS | 25.0% |
! | TTGGAACTACAAAACAATAA+AGG | + | Chr2:26731306-26731325 | MsG0280008172.01.T01:CDS | 25.0% |
! | TTTAGTCTAATACATGAGTT+AGG | + | Chr2:26733846-26733865 | MsG0280008172.01.T01:CDS | 25.0% |
! | TTTGTATTGCATTTATGATC+AGG | + | Chr2:26735287-26735306 | MsG0280008172.01.T01:intron | 25.0% |
!! | AAAAAGGTTTGAATTTTCCT+CGG | - | Chr2:26732297-26732316 | None:intergenic | 25.0% |
!! | AAATCATACTCATTTTGTAG+AGG | + | Chr2:26731254-26731273 | MsG0280008172.01.T01:CDS | 25.0% |
!! | GAGGTCTTAAACAAATTTTA+TGG | - | Chr2:26734514-26734533 | None:intergenic | 25.0% |
!! | GTTTTTCTTATAATAGTGAC+CGG | - | Chr2:26732500-26732519 | None:intergenic | 25.0% |
!! | TTTAAGACAATAGAAGCAAT+TGG | + | Chr2:26734141-26734160 | MsG0280008172.01.T01:intron | 25.0% |
!! | TTTTATGTGTAAGCCTTAAT+CGG | + | Chr2:26734218-26734237 | MsG0280008172.01.T01:intron | 25.0% |
!!! | ACTCATTGAAATGTTTTTTG+AGG | + | Chr2:26732414-26732433 | MsG0280008172.01.T01:intron | 25.0% |
!!! | GAAAACCTACTGTTTTTTTT+TGG | + | Chr2:26733457-26733476 | MsG0280008172.01.T01:intron | 25.0% |
!!! | GATATTAAGTTAAGTTGAGA+AGG | - | Chr2:26733951-26733970 | None:intergenic | 25.0% |
!!! | GCATCAAATGTTATTTTTGA+CGG | - | Chr2:26733699-26733718 | None:intergenic | 25.0% |
!!! | GCTTGTTTTTGTAAATAGTT+TGG | - | Chr2:26734810-26734829 | None:intergenic | 25.0% |
!!! | TAGGTAAGCATTTTTTTTCT+TGG | - | Chr2:26735179-26735198 | None:intergenic | 25.0% |
AAAAAAATGCTTACCTAGCT+TGG | + | Chr2:26735182-26735201 | MsG0280008172.01.T01:intron | 30.0% | |
AAAAATGACCATTATGGTGT+TGG | - | Chr2:26733379-26733398 | None:intergenic | 30.0% | |
AAAATTTCCCAAAAACTGCT+AGG | - | Chr2:26731862-26731881 | None:intergenic | 30.0% | |
AAAGACTTACTAAGATCAGA+AGG | - | Chr2:26731981-26732000 | None:intergenic | 30.0% | |
AAGAGGGAAGTTATAATATG+TGG | - | Chr2:26733526-26733545 | None:intergenic | 30.0% | |
AAGTTCTTGTATTTCCACTT+TGG | + | Chr2:26735108-26735127 | MsG0280008172.01.T01:intron | 30.0% | |
ACAAATCATTGTTGATGCAA+AGG | - | Chr2:26731545-26731564 | None:intergenic | 30.0% | |
ACATATTATAACTTCCCTCT+TGG | + | Chr2:26733525-26733544 | MsG0280008172.01.T01:intron | 30.0% | |
ACATGAAATACTATGGTTTG+AGG | + | Chr2:26733992-26734011 | MsG0280008172.01.T01:CDS | 30.0% | |
ACATTTGATGCTACAAAAGT+TGG | + | Chr2:26733708-26733727 | MsG0280008172.01.T01:CDS | 30.0% | |
ACCAATCAAATTATGTGTGT+AGG | + | Chr2:26733573-26733592 | MsG0280008172.01.T01:intron | 30.0% | |
CAGTATGGTTCAAAACAATT+CGG | + | Chr2:26733120-26733139 | MsG0280008172.01.T01:intron | 30.0% | |
CATATGTATGGTGAAATAGT+AGG | - | Chr2:26734025-26734044 | None:intergenic | 30.0% | |
CGAATCATTACTAACAATTC+TGG | + | Chr2:26733054-26733073 | MsG0280008172.01.T01:intron | 30.0% | |
GTCTGAACCTGATTTAATAA+GGG | + | Chr2:26733761-26733780 | MsG0280008172.01.T01:CDS | 30.0% | |
TAAATTACTCAAATGCCCTT+CGG | - | Chr2:26732869-26732888 | None:intergenic | 30.0% | |
TCCATAATTATAACCCACTT+GGG | + | Chr2:26731584-26731603 | MsG0280008172.01.T01:intron | 30.0% | |
TGAAATATTCATGACCAAGA+GGG | - | Chr2:26733542-26733561 | None:intergenic | 30.0% | |
TGAATTGAAACAATCCAGTT+CGG | + | Chr2:26733080-26733099 | MsG0280008172.01.T01:intron | 30.0% | |
TGCTTATAATAGTGACTAGA+GGG | + | Chr2:26732613-26732632 | MsG0280008172.01.T01:intron | 30.0% | |
TTGAAATATTCATGACCAAG+AGG | - | Chr2:26733543-26733562 | None:intergenic | 30.0% | |
TTGCTTATAATAGTGACTAG+AGG | + | Chr2:26732612-26732631 | MsG0280008172.01.T01:intron | 30.0% | |
TTTATGTGTAAGCCTTAATC+GGG | + | Chr2:26734219-26734238 | MsG0280008172.01.T01:intron | 30.0% | |
! | AGTTGGAAATTTTCACTTTG+TGG | + | Chr2:26733725-26733744 | MsG0280008172.01.T01:CDS | 30.0% |
! | CAGTTCAGTTTGAAATAGTT+TGG | + | Chr2:26733220-26733239 | MsG0280008172.01.T01:CDS | 30.0% |
! | TGCATCAACAATGATTTGTA+TGG | + | Chr2:26731546-26731565 | MsG0280008172.01.T01:CDS | 30.0% |
! | TGGATATGCTGTTTATAAGT+AGG | - | Chr2:26735447-26735466 | None:intergenic | 30.0% |
! | TGTCAGATGCTAACTTTTAT+TGG | + | Chr2:26734183-26734202 | MsG0280008172.01.T01:intron | 30.0% |
! | TTAATTGCAGAAGTTTTCCT+CGG | - | Chr2:26732271-26732290 | None:intergenic | 30.0% |
!! | ACCGTATCAAATTTTAGAAG+AGG | - | Chr2:26732955-26732974 | None:intergenic | 30.0% |
!! | ATTAAGTTAAGTTGAGAAGG+AGG | - | Chr2:26733948-26733967 | None:intergenic | 30.0% |
!! | CCCTCTTCTAAAATTTGATA+CGG | + | Chr2:26732951-26732970 | MsG0280008172.01.T01:intron | 30.0% |
!! | CCGTATCAAATTTTAGAAGA+GGG | - | Chr2:26732954-26732973 | None:intergenic | 30.0% |
!! | TGGAAATGAGTGTTGAAATT+AGG | - | Chr2:26734728-26734747 | None:intergenic | 30.0% |
!! | TTGGTATTGACTAAGAACTT+GGG | - | Chr2:26733337-26733356 | None:intergenic | 30.0% |
!!! | TGGTTTGTTTTGAAACAGTT+CGG | + | Chr2:26733240-26733259 | MsG0280008172.01.T01:CDS | 30.0% |
!!! | TTTTTGGTTAAGTAGACTAG+TGG | + | Chr2:26734324-26734343 | MsG0280008172.01.T01:intron | 30.0% |
AAAAAGCAGCCATAGTAAGA+GGG | - | Chr2:26731440-26731459 | None:intergenic | 35.0% | |
AATCAATCCACATAGCAACT+TGG | - | Chr2:26734955-26734974 | None:intergenic | 35.0% | |
AATCATGAACTAAACCGAAC+TGG | - | Chr2:26733097-26733116 | None:intergenic | 35.0% | |
ACAGCAACATTTAACATACC+TGG | + | Chr2:26734759-26734778 | MsG0280008172.01.T01:CDS | 35.0% | |
ACCAATTCAGATGTGCTTAA+AGG | + | Chr2:26734431-26734450 | MsG0280008172.01.T01:intron | 35.0% | |
ACCTGATTTAATAAGGGATG+TGG | + | Chr2:26733767-26733786 | MsG0280008172.01.T01:CDS | 35.0% | |
ATGGATGTACAGAAACACAT+AGG | + | Chr2:26733658-26733677 | MsG0280008172.01.T01:CDS | 35.0% | |
ATTGGTCCGAAATATGAACA+AGG | + | Chr2:26731926-26731945 | MsG0280008172.01.T01:CDS | 35.0% | |
ATTTCAACACTCATTTCCAC+TGG | + | Chr2:26734729-26734748 | MsG0280008172.01.T01:CDS | 35.0% | |
ATTTCCATGGTTTGATGTCA+TGG | + | Chr2:26735036-26735055 | MsG0280008172.01.T01:intron | 35.0% | |
CAAGTTCTTAGTCAATACCA+AGG | + | Chr2:26733336-26733355 | MsG0280008172.01.T01:intron | 35.0% | |
CAGCAATGTGAAATATGCTT+CGG | - | Chr2:26733803-26733822 | None:intergenic | 35.0% | |
CATCTAACAAGTTCCAGAAA+TGG | - | Chr2:26733615-26733634 | None:intergenic | 35.0% | |
CATTTAAATTGTGTGAGTCC+AGG | - | Chr2:26734350-26734369 | None:intergenic | 35.0% | |
CTGTCTCCTTGTTCATATTT+CGG | - | Chr2:26731935-26731954 | None:intergenic | 35.0% | |
CTTCCAATATGTCTACTGTA+TGG | - | Chr2:26731497-26731516 | None:intergenic | 35.0% | |
CTTGCCCAAAAAAAAACAGT+AGG | - | Chr2:26733465-26733484 | None:intergenic | 35.0% | |
GAAGCTTAATACCCTAGTTT+GGG | - | Chr2:26734266-26734285 | None:intergenic | 35.0% | |
GCCTACACACATAATTTGAT+TGG | - | Chr2:26733577-26733596 | None:intergenic | 35.0% | |
GCTGCAATAACAAAGGATTA+TGG | + | Chr2:26731204-26731223 | MsG0280008172.01.T01:CDS | 35.0% | |
GGACTCACACAATTTAAATG+TGG | + | Chr2:26734350-26734369 | MsG0280008172.01.T01:intron | 35.0% | |
GGGTATTAAGCTTCAAACTA+GGG | + | Chr2:26734272-26734291 | MsG0280008172.01.T01:intron | 35.0% | |
GGTCTGAACCTGATTTAATA+AGG | + | Chr2:26733760-26733779 | MsG0280008172.01.T01:CDS | 35.0% | |
GTCCATAATTATAACCCACT+TGG | + | Chr2:26731583-26731602 | MsG0280008172.01.T01:intron | 35.0% | |
GTTACAAAAACAGTCAACAC+TGG | + | Chr2:26731902-26731921 | MsG0280008172.01.T01:CDS | 35.0% | |
TAAAAAGCAGCCATAGTAAG+AGG | - | Chr2:26731441-26731460 | None:intergenic | 35.0% | |
TAATTATAACCCACTTGGGT+TGG | + | Chr2:26731588-26731607 | MsG0280008172.01.T01:intron | 35.0% | |
TACAGTAGACATATTGGAAG+AGG | + | Chr2:26731497-26731516 | MsG0280008172.01.T01:CDS | 35.0% | |
TCCACATCCCTTATTAAATC+AGG | - | Chr2:26733771-26733790 | None:intergenic | 35.0% | |
TCCTTTAAGCACATCTGAAT+TGG | - | Chr2:26734435-26734454 | None:intergenic | 35.0% | |
TGAAGCTTAATACCCTAGTT+TGG | - | Chr2:26734267-26734286 | None:intergenic | 35.0% | |
TGATGTTGACACATATGCAA+AGG | + | Chr2:26732164-26732183 | MsG0280008172.01.T01:intron | 35.0% | |
TGGTTCAAAACAATTCGGTT+CGG | + | Chr2:26733125-26733144 | MsG0280008172.01.T01:intron | 35.0% | |
TTAACTACCGAGGAAAACTT+CGG | - | Chr2:26732787-26732806 | None:intergenic | 35.0% | |
TTACCTAGCTTGGAAAATAG+AGG | + | Chr2:26735192-26735211 | MsG0280008172.01.T01:intron | 35.0% | |
TTATGTGTAAGCCTTAATCG+GGG | + | Chr2:26734220-26734239 | MsG0280008172.01.T01:intron | 35.0% | |
TTTCCATGGTTTGATGTCAT+GGG | + | Chr2:26735037-26735056 | MsG0280008172.01.T01:intron | 35.0% | |
! | AAAAAGGTTTGAGGTTTCCT+CGG | + | Chr2:26732751-26732770 | MsG0280008172.01.T01:intron | 35.0% |
! | AATTCACTCCTAGCAGTTTT+TGG | + | Chr2:26731851-26731870 | MsG0280008172.01.T01:intron | 35.0% |
! | AGGGTATTAAGCTTCAAACT+AGG | + | Chr2:26734271-26734290 | MsG0280008172.01.T01:intron | 35.0% |
! | ATAGATCAGTTTTCGAACCT+CGG | - | Chr2:26734389-26734408 | None:intergenic | 35.0% |
! | ATTCACTCCTAGCAGTTTTT+GGG | + | Chr2:26731852-26731871 | MsG0280008172.01.T01:intron | 35.0% |
! | TACTCATTTTGTAGAGGAGT+TGG | + | Chr2:26731260-26731279 | MsG0280008172.01.T01:CDS | 35.0% |
! | TTAACTGCAGAAGTTTTCCT+CGG | + | Chr2:26732803-26732822 | MsG0280008172.01.T01:intron | 35.0% |
! | TTTTGTGACCAACACCATAA+TGG | + | Chr2:26733368-26733387 | MsG0280008172.01.T01:intron | 35.0% |
!! | ACCCAAGTGGGTTATAATTA+TGG | - | Chr2:26731588-26731607 | None:intergenic | 35.0% |
!! | ATTCTCTCTGGAGTCAATTT+AGG | + | Chr2:26731753-26731772 | MsG0280008172.01.T01:intron | 35.0% |
!! | CTTGGTATTGACTAAGAACT+TGG | - | Chr2:26733338-26733357 | None:intergenic | 35.0% |
!! | GAACTTGTTAGATGTCTTTG+GGG | + | Chr2:26733621-26733640 | MsG0280008172.01.T01:CDS | 35.0% |
!! | GGAACTTGTTAGATGTCTTT+GGG | + | Chr2:26733620-26733639 | MsG0280008172.01.T01:CDS | 35.0% |
!! | TGGAACTTGTTAGATGTCTT+TGG | + | Chr2:26733619-26733638 | MsG0280008172.01.T01:CDS | 35.0% |
!! | TGGTAGACATCCATTTTTCT+TGG | - | Chr2:26731391-26731410 | None:intergenic | 35.0% |
!!! | CGGTGTTTTTTAGTTTGCTT+CGG | - | Chr2:26733036-26733055 | None:intergenic | 35.0% |
!!! | CTTACTATGGCTGCTTTTTA+TGG | + | Chr2:26731441-26731460 | MsG0280008172.01.T01:CDS | 35.0% |
!!! | GATACGGTTGTTTTTAGTAG+AGG | + | Chr2:26732967-26732986 | MsG0280008172.01.T01:intron | 35.0% |
AAAACAGTCAACACTGGCAT+TGG | + | Chr2:26731908-26731927 | MsG0280008172.01.T01:CDS | 40.0% | |
AAAAGCAGCCATAGTAAGAG+GGG | - | Chr2:26731439-26731458 | None:intergenic | 40.0% | |
AATCCACATAGCAACTTGGA+AGG | - | Chr2:26734951-26734970 | None:intergenic | 40.0% | |
ACATATTGGAAGAGGAGGAA+TGG | + | Chr2:26731505-26731524 | MsG0280008172.01.T01:CDS | 40.0% | |
ACTTCTGCAATTAACTACCG+AGG | + | Chr2:26732277-26732296 | MsG0280008172.01.T01:intron | 40.0% | |
AGGAGTGAATTTGCAGGTAA+GGG | - | Chr2:26731842-26731861 | None:intergenic | 40.0% | |
AGTAGACATATTGGAAGAGG+AGG | + | Chr2:26731500-26731519 | MsG0280008172.01.T01:CDS | 40.0% | |
ATCTCATGTTCGATTCTCTC+TGG | + | Chr2:26731656-26731675 | MsG0280008172.01.T01:intron | 40.0% | |
CAGCCATACAGTAGACATAT+TGG | + | Chr2:26731491-26731510 | MsG0280008172.01.T01:CDS | 40.0% | |
CATAATTCGGCAGTTAACTG+CGG | - | Chr2:26732865-26732846 | None:intergenic | 40.0% | |
CCTAAACGCTGCAATAACAA+AGG | + | Chr2:26731197-26731216 | MsG0280008172.01.T01:CDS | 40.0% | |
CCTCAGCAAATATCTCATCA+GGG | - | Chr2:26734644-26734663 | None:intergenic | 40.0% | |
CGAAATATGAACAAGGAGAC+AGG | + | Chr2:26731933-26731952 | MsG0280008172.01.T01:CDS | 40.0% | |
CGGATAATATCAGACCAAAG+TGG | - | Chr2:26735125-26735144 | None:intergenic | 40.0% | |
CTCAGCAAATATCTCATCAG+GGG | - | Chr2:26734643-26734662 | None:intergenic | 40.0% | |
GAATCGAACATGAGATCTTG+AGG | - | Chr2:26731652-26731671 | None:intergenic | 40.0% | |
GCAACATTTAACATACCTGG+TGG | + | Chr2:26734762-26734781 | MsG0280008172.01.T01:CDS | 40.0% | |
GGTGGCTTCAACAAAAATAC+AGG | + | Chr2:26734780-26734799 | MsG0280008172.01.T01:CDS | 40.0% | |
GGTGGTTAATTAACTGCAGT+CGG | - | Chr2:26732250-26732269 | None:intergenic | 40.0% | |
TAACTGCCGAATTATGGAAC+CGG | - | Chr2:26732842-26732861 | None:intergenic | 40.0% | |
TAGGAGTGAATTTGCAGGTA+AGG | - | Chr2:26731843-26731862 | None:intergenic | 40.0% | |
TCCTCAGCAAATATCTCATC+AGG | - | Chr2:26734645-26734664 | None:intergenic | 40.0% | |
TGCTATCATCATGCTTGTGA+TGG | - | Chr2:26734991-26735010 | None:intergenic | 40.0% | |
TGCTGTTGACACATATGCAA+AGG | - | Chr2:26732906-26732925 | None:intergenic | 40.0% | |
TGTTGCTGTAAATACTCCAG+TGG | - | Chr2:26734748-26734767 | None:intergenic | 40.0% | |
! | ACTTTGTGGCTGAACTTTTG+AGG | + | Chr2:26733739-26733758 | MsG0280008172.01.T01:CDS | 40.0% |
! | ATACCCTAGTTTGGGATGTT+TGG | - | Chr2:26734258-26734277 | None:intergenic | 40.0% |
! | CTGCAGTCGGTTTCATAATT+CGG | - | Chr2:26732237-26732256 | None:intergenic | 40.0% |
! | TTAACTGCCGAAGTTTTCCT+CGG | + | Chr2:26732777-26732796 | MsG0280008172.01.T01:intron | 40.0% |
! | TTGCCTCTATTTTCCAAGCT+AGG | - | Chr2:26735198-26735217 | None:intergenic | 40.0% |
!! | CCTTTGTTATTGCAGCGTTT+AGG | - | Chr2:26731200-26731219 | None:intergenic | 40.0% |
!! | GAGTTCTCTGGAGTCAATTT+AGG | + | Chr2:26731678-26731697 | MsG0280008172.01.T01:intron | 40.0% |
!! | GTATTTTTGTTGAAGCCACC+AGG | - | Chr2:26734780-26734799 | None:intergenic | 40.0% |
!! | TCTCTGGAGTCAATTTAGGT+GGG | + | Chr2:26731682-26731701 | MsG0280008172.01.T01:intron | 40.0% |
!! | TTCTCTGGAGTCAATTTAGG+TGG | + | Chr2:26731681-26731700 | MsG0280008172.01.T01:intron | 40.0% |
!!! | ACGGTTGTTTTTAGTAGAGG+TGG | + | Chr2:26732970-26732989 | MsG0280008172.01.T01:intron | 40.0% |
!!! | AGCAGTTCGGTTCAGTTTTT+TGG | - | Chr2:26733005-26733024 | None:intergenic | 40.0% |
!!! | CGGTTGTTTTTAGTAGAGGT+GGG | + | Chr2:26732971-26732990 | MsG0280008172.01.T01:intron | 40.0% |
ACAGCATATCCATCATGCTC+AGG | + | Chr2:26735455-26735474 | MsG0280008172.01.T01:CDS | 45.0% | |
ACTGCTAGGAGTGAATTTGC+AGG | - | Chr2:26731848-26731867 | None:intergenic | 45.0% | |
ACTTCTGCAGTTAACTACCG+AGG | - | Chr2:26732797-26732816 | None:intergenic | 45.0% | |
AGGAATGACCCCTCTTACTA+TGG | + | Chr2:26731428-26731447 | MsG0280008172.01.T01:CDS | 45.0% | |
AGTGAATTTGCAGGTAAGGG+AGG | - | Chr2:26731839-26731858 | None:intergenic | 45.0% | |
CTGCAGTTAATTAACCACCG+AGG | + | Chr2:26732251-26732270 | MsG0280008172.01.T01:intron | 45.0% | |
CTTCCTTCCAAGTTGCTATG+TGG | + | Chr2:26734945-26734964 | MsG0280008172.01.T01:intron | 45.0% | |
GAACCCATGACATCAAACCA+TGG | - | Chr2:26735043-26735062 | None:intergenic | 45.0% | |
GGAGACAGGCTTACATATCT+TGG | + | Chr2:26731947-26731966 | MsG0280008172.01.T01:CDS | 45.0% | |
GGATGTCTACCACATATTCG+AGG | + | Chr2:26731399-26731418 | MsG0280008172.01.T01:CDS | 45.0% | |
GGCAGTTAACTGCCGAATTA+TGG | - | Chr2:26732848-26732867 | None:intergenic | 45.0% | |
GGTCTCAAGTCAATACCACT+AGG | - | Chr2:26731614-26731633 | None:intergenic | 45.0% | |
TCGAACATGAGATCTTGAGG+AGG | - | Chr2:26731649-26731668 | None:intergenic | 45.0% | |
TGGGGCATACTTCTCAATCA+TGG | + | Chr2:26733639-26733658 | MsG0280008172.01.T01:CDS | 45.0% | |
TTCGGTTCAGTTCAGCAGTT+CGG | - | Chr2:26733018-26733037 | None:intergenic | 45.0% | |
TTGTGCTTAGCTGCTGTATC+TGG | + | Chr2:26731339-26731358 | MsG0280008172.01.T01:CDS | 45.0% | |
! | ACTTGGGTTGCACATGGTTT+CGG | - | Chr2:26733321-26733340 | None:intergenic | 45.0% |
! | ATTGCAGAAGTTTTCCTCGG+TGG | - | Chr2:26732268-26732287 | None:intergenic | 45.0% |
! | CATCTGAATTGGTAGCTGCA+AGG | - | Chr2:26734424-26734443 | None:intergenic | 45.0% |
! | CCCTGATGAGATATTTGCTG+AGG | + | Chr2:26734641-26734660 | MsG0280008172.01.T01:CDS | 45.0% |
! | CTAAGAACTTGGGTTGCACA+TGG | - | Chr2:26733327-26733346 | None:intergenic | 45.0% |
! | GAAGAGCACAAGTCCATTTC+TGG | + | Chr2:26733599-26733618 | MsG0280008172.01.T01:CDS | 45.0% |
! | TTGCAGCCGGTTCCATAATT+CGG | + | Chr2:26732833-26732852 | MsG0280008172.01.T01:intron | 45.0% |
!! | AAAGAGCTGACTTGTGAGGT+GGG | + | Chr2:26735414-26735433 | MsG0280008172.01.T01:CDS | 45.0% |
!! | CTCTCTGGAGTCAATTTAGG+TGG | + | Chr2:26731756-26731775 | MsG0280008172.01.T01:intron | 45.0% |
!! | TCACAAAGAGCTGACTTGTG+AGG | + | Chr2:26735410-26735429 | MsG0280008172.01.T01:CDS | 45.0% |
!! | ATATTAATAATAACAATTTA+TGG | - | Chr2:26732333-26732352 | None:intergenic | 5.0% |
!!! | TTTTTATATTTTTTTTTCAA+AGG | + | Chr2:26733183-26733202 | MsG0280008172.01.T01:intron | 5.0% |
AATTCGGCAGTTAACTGCGG+AGG | - | Chr2:26732221-26732240 | None:intergenic | 50.0% | |
ACTTCGGCAGTTAATTGCCG+AGG | - | Chr2:26732771-26732790 | None:intergenic | 50.0% | |
AGGGCCAAACATCCCAAACT+AGG | + | Chr2:26734251-26734270 | MsG0280008172.01.T01:intron | 50.0% | |
ATTCGGCAGTTAACTGCCGA+AGG | + | Chr2:26732850-26732869 | MsG0280008172.01.T01:intron | 50.0% | |
ATTCGGCAGTTAACTGCGGA+GGG | - | Chr2:26732220-26732239 | None:intergenic | 50.0% | |
CCTCGGTAGTTAATTGCAGC+CGG | + | Chr2:26732820-26732839 | MsG0280008172.01.T01:intron | 50.0% | |
CCTTGAGCACCTCGAATATG+TGG | - | Chr2:26731411-26731430 | None:intergenic | 50.0% | |
GGGCCAAACATCCCAAACTA+GGG | + | Chr2:26734252-26734271 | MsG0280008172.01.T01:intron | 50.0% | |
GGTTAAGTAGACTAGTGGCC+TGG | + | Chr2:26734329-26734348 | MsG0280008172.01.T01:intron | 50.0% | |
GGTTGCACATGGTTTCGGTT+CGG | - | Chr2:26733316-26733335 | None:intergenic | 50.0% | |
GTTGCACATGGTTTCGGTTC+GGG | - | Chr2:26733315-26733334 | None:intergenic | 50.0% | |
TTCGGCAGTTAACTGCCGAA+GGG | + | Chr2:26732851-26732870 | MsG0280008172.01.T01:intron | 50.0% | |
TTGAGGAGGAGCAAACTCTC+AGG | - | Chr2:26731635-26731654 | None:intergenic | 50.0% | |
! | AGTTTGGGATGTTTGGCCCT+TGG | - | Chr2:26734251-26734270 | None:intergenic | 50.0% |
! | CCACATATTCGAGGTGCTCA+AGG | + | Chr2:26731408-26731427 | MsG0280008172.01.T01:CDS | 50.0% |
! | GATCGGCTCAACATGTTCAG+AGG | - | Chr2:26734533-26734552 | None:intergenic | 50.0% |
!! | CAAAGAGCTGACTTGTGAGG+TGG | + | Chr2:26735413-26735432 | MsG0280008172.01.T01:CDS | 50.0% |
!! | CGATTCTCTCTGGAGTTCTC+TGG | + | Chr2:26731666-26731685 | MsG0280008172.01.T01:intron | 50.0% |
ACCACTAGGCCAACCCAAGT+GGG | - | Chr2:26731600-26731619 | None:intergenic | 55.0% | |
CCGGCTGCAATTAACTACCG+AGG | - | Chr2:26732823-26732842 | None:intergenic | 55.0% | |
GTGGAGAAGTGATGAGTCCG+AGG | + | Chr2:26734369-26734388 | MsG0280008172.01.T01:intron | 55.0% | |
GTGTAAGCCTTAATCGGGGC+TGG | + | Chr2:26734224-26734243 | MsG0280008172.01.T01:intron | 55.0% | |
TACCACTAGGCCAACCCAAG+TGG | - | Chr2:26731601-26731620 | None:intergenic | 55.0% | |
TTCGGCAGTTAACTGCGGAG+GGG | - | Chr2:26732219-26732238 | None:intergenic | 55.0% | |
!! | CTTAATCGGGGCTGGTCCAA+GGG | + | Chr2:26734232-26734251 | MsG0280008172.01.T01:intron | 55.0% |
CCTTGGACCAGCCCCGATTA+AGG | - | Chr2:26734234-26734253 | None:intergenic | 60.0% | |
!! | ACCCACTTGGGTTGGCCTAG+TGG | + | Chr2:26731596-26731615 | MsG0280008172.01.T01:intron | 60.0% |
!! | CCTTAATCGGGGCTGGTCCA+AGG | + | Chr2:26734231-26734250 | MsG0280008172.01.T01:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 26731174 | 26735482 | 26731174 | ID=MsG0280008172.01;Name=MsG0280008172.01 |
Chr2 | mRNA | 26731174 | 26735482 | 26731174 | ID=MsG0280008172.01.T01;Parent=MsG0280008172.01;Name=MsG0280008172.01.T01;_AED=0.31;_eAED=0.31;_QI=0|0|0|0.66|1|1|6|0|481 |
Chr2 | exon | 26731174 | 26731567 | 26731174 | ID=MsG0280008172.01.T01:exon:35058;Parent=MsG0280008172.01.T01 |
Chr2 | exon | 26731886 | 26731990 | 26731886 | ID=MsG0280008172.01.T01:exon:35059;Parent=MsG0280008172.01.T01 |
Chr2 | exon | 26733205 | 26733261 | 26733205 | ID=MsG0280008172.01.T01:exon:35060;Parent=MsG0280008172.01.T01 |
Chr2 | exon | 26733595 | 26734013 | 26733595 | ID=MsG0280008172.01.T01:exon:35061;Parent=MsG0280008172.01.T01 |
Chr2 | exon | 26734582 | 26734940 | 26734582 | ID=MsG0280008172.01.T01:exon:35062;Parent=MsG0280008172.01.T01 |
Chr2 | exon | 26735371 | 26735482 | 26735371 | ID=MsG0280008172.01.T01:exon:35063;Parent=MsG0280008172.01.T01 |
Chr2 | CDS | 26731174 | 26731567 | 26731174 | ID=MsG0280008172.01.T01:cds;Parent=MsG0280008172.01.T01 |
Chr2 | CDS | 26731886 | 26731990 | 26731886 | ID=MsG0280008172.01.T01:cds;Parent=MsG0280008172.01.T01 |
Chr2 | CDS | 26733205 | 26733261 | 26733205 | ID=MsG0280008172.01.T01:cds;Parent=MsG0280008172.01.T01 |
Chr2 | CDS | 26733595 | 26734013 | 26733595 | ID=MsG0280008172.01.T01:cds;Parent=MsG0280008172.01.T01 |
Chr2 | CDS | 26734582 | 26734940 | 26734582 | ID=MsG0280008172.01.T01:cds;Parent=MsG0280008172.01.T01 |
Chr2 | CDS | 26735371 | 26735482 | 26735371 | ID=MsG0280008172.01.T01:cds;Parent=MsG0280008172.01.T01 |
Gene Sequence |
Protein sequence |