Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005729.01.T01 | KEH43981.1 | 89.736 | 341 | 6 | 1 | 1 | 341 | 1 | 312 | 0 | 585 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005729.01.T01 | Q9SUG3 | 75.794 | 252 | 59 | 1 | 90 | 341 | 101 | 350 | 3.48E-128 | 374 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005729.01.T01 | A0A072VQP8 | 89.736 | 341 | 6 | 1 | 1 | 341 | 1 | 312 | 0.0 | 585 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048621.01 | MsG0180005729.01 | 0.801993 | 6.926306e-49 | 3.354513e-46 |
MsG0080048660.01 | MsG0180005729.01 | 0.813285 | 2.765173e-51 | 1.798233e-48 |
MsG0180000160.01 | MsG0180005729.01 | 0.823609 | 1.263040e-53 | 1.092810e-50 |
MsG0180000221.01 | MsG0180005729.01 | 0.820039 | 8.467524e-53 | 6.626639e-50 |
MsG0180000241.01 | MsG0180005729.01 | 0.811401 | 7.132164e-51 | 4.410687e-48 |
MsG0180000627.01 | MsG0180005729.01 | 0.850828 | 1.318907e-60 | 2.617047e-57 |
MsG0180001088.01 | MsG0180005729.01 | 0.824216 | 9.100608e-54 | 8.010041e-51 |
MsG0180001119.01 | MsG0180005729.01 | 0.801132 | 1.040285e-48 | 4.929978e-46 |
MsG0180005639.01 | MsG0180005729.01 | 0.826221 | 3.056254e-54 | 2.848517e-51 |
MsG0180005729.01 | MsG0180005730.01 | 0.843382 | 1.450478e-58 | 2.265631e-55 |
MsG0180005729.01 | MsG0180005731.01 | 0.993989 | 1.014233e-203 | 9.850050e-197 |
MsG0180005729.01 | MsG0180005732.01 | 0.845572 | 3.735814e-59 | 6.252392e-56 |
MsG0180005729.01 | MsG0180006054.01 | 0.839963 | 1.156683e-57 | 1.623596e-54 |
MsG0180005729.01 | MsG0280007118.01 | 0.819540 | 1.100837e-52 | 8.495561e-50 |
MsG0180005729.01 | MsG0280007877.01 | 0.840380 | 9.003085e-58 | 1.280181e-54 |
MsG0180005729.01 | MsG0280008152.01 | 0.808669 | 2.764184e-50 | 1.590013e-47 |
MsG0180005729.01 | MsG0280008165.01 | 0.848324 | 6.590106e-60 | 1.204920e-56 |
MsG0180005729.01 | MsG0280008171.01 | 0.844613 | 6.782132e-59 | 1.100962e-55 |
MsG0180005729.01 | MsG0280008172.01 | 0.820484 | 6.694628e-53 | 5.303783e-50 |
MsG0180005729.01 | MsG0280010916.01 | 0.800201 | 1.610540e-48 | 7.453896e-46 |
MsG0180005729.01 | MsG0280011216.01 | 0.801647 | 8.158604e-49 | 3.916698e-46 |
MsG0180005729.01 | MsG0280011404.01 | 0.817502 | 3.189287e-52 | 2.326774e-49 |
MsG0180005729.01 | MsG0380012567.01 | 0.813440 | 2.556437e-51 | 1.669627e-48 |
MsG0180005729.01 | MsG0380015277.01 | 0.800166 | 1.637006e-48 | 7.569703e-46 |
MsG0180005729.01 | MsG0380015847.01 | -0.808314 | 3.290837e-50 | 1.875577e-47 |
MsG0180005729.01 | MsG0380016285.01 | 0.808398 | 3.159217e-50 | 1.804501e-47 |
MsG0180005729.01 | MsG0380017202.01 | 0.826507 | 2.611558e-54 | 2.453984e-51 |
MsG0180005729.01 | MsG0480018226.01 | 0.825646 | 4.185065e-54 | 3.837267e-51 |
MsG0180005729.01 | MsG0480018236.01 | 0.809340 | 1.986367e-50 | 1.163223e-47 |
MsG0180005729.01 | MsG0480019384.01 | 0.808840 | 2.541076e-50 | 1.468228e-47 |
MsG0180005729.01 | MsG0480020283.01 | 0.800523 | 1.384582e-48 | 6.460876e-46 |
MsG0180005729.01 | MsG0480020322.01 | 0.810788 | 9.685371e-51 | 5.893092e-48 |
MsG0180005729.01 | MsG0480021869.01 | 0.812398 | 4.326572e-51 | 2.748086e-48 |
MsG0180005729.01 | MsG0480022066.01 | 0.822391 | 2.429403e-53 | 2.030806e-50 |
MsG0180005729.01 | MsG0480022535.01 | 0.812015 | 5.244243e-51 | 3.296344e-48 |
MsG0180005729.01 | MsG0480022572.01 | 0.816233 | 6.146603e-52 | 4.330998e-49 |
MsG0180005729.01 | MsG0480022579.01 | 0.810587 | 1.070349e-50 | 6.477659e-48 |
MsG0180005729.01 | MsG0480022802.01 | 0.805743 | 1.152183e-49 | 6.143915e-47 |
MsG0180005729.01 | MsG0480022978.01 | 0.806762 | 7.026002e-50 | 3.845293e-47 |
MsG0180005729.01 | MsG0480023489.01 | 0.804888 | 1.739791e-49 | 9.076297e-47 |
MsG0180005729.01 | MsG0580025827.01 | 0.852148 | 5.584088e-61 | 1.156111e-57 |
MsG0180005729.01 | MsG0580025832.01 | 0.815471 | 9.090895e-52 | 6.273884e-49 |
MsG0180005729.01 | MsG0580027955.01 | 0.807136 | 5.856674e-50 | 3.236475e-47 |
MsG0180005729.01 | MsG0580028428.01 | 0.824744 | 6.835832e-54 | 6.109277e-51 |
MsG0180005729.01 | MsG0580029880.01 | 0.805122 | 1.554864e-49 | 8.159553e-47 |
MsG0180005729.01 | MsG0580030071.01 | 0.806611 | 7.563814e-50 | 4.123485e-47 |
MsG0180005729.01 | MsG0680032460.01 | -0.813178 | 2.918590e-51 | 1.892414e-48 |
MsG0180005729.01 | MsG0680035707.01 | 0.858673 | 7.012043e-63 | 1.803795e-59 |
MsG0180005729.01 | MsG0780036595.01 | 0.811698 | 6.147154e-51 | 3.831098e-48 |
MsG0180005729.01 | MsG0780039847.01 | 0.814092 | 1.837496e-51 | 1.221379e-48 |
MsG0180005729.01 | MsG0780040235.01 | 0.801620 | 8.261152e-49 | 3.963289e-46 |
MsG0180005729.01 | MsG0880041864.01 | 0.802068 | 6.683955e-49 | 3.243470e-46 |
MsG0180005729.01 | MsG0880043157.01 | 0.808695 | 2.729739e-50 | 1.571217e-47 |
MsG0180005729.01 | MsG0880043298.01 | 0.822901 | 1.848600e-53 | 1.567791e-50 |
MsG0180005729.01 | MsG0880044906.01 | 0.809075 | 2.263076e-50 | 1.315934e-47 |
MsG0180005729.01 | MsG0880045706.01 | 0.806950 | 6.411462e-50 | 3.526065e-47 |
MsG0180005729.01 | MsG0880045992.01 | 0.804627 | 1.972669e-49 | 1.022062e-46 |
MsG0180005729.01 | MsG0880046699.01 | 0.823889 | 1.086233e-53 | 9.473174e-51 |
MsG0180005729.01 | MsG0880047758.01 | 0.815609 | 8.467895e-52 | 5.866117e-49 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005729.01.T01 | MTR_1g105930 | 89.736 | 341 | 6 | 1 | 1 | 341 | 1 | 312 | 0.0 | 585 |
MsG0180005729.01.T01 | MTR_1g105930 | 97.619 | 252 | 6 | 0 | 90 | 341 | 91 | 342 | 0.0 | 509 |
MsG0180005729.01.T01 | MTR_5g005370 | 79.283 | 251 | 50 | 1 | 86 | 334 | 55 | 305 | 7.31e-133 | 381 |
MsG0180005729.01.T01 | MTR_5g005370 | 79.268 | 246 | 51 | 0 | 89 | 334 | 36 | 281 | 3.07e-132 | 379 |
MsG0180005729.01.T01 | MTR_5g005370 | 79.592 | 245 | 50 | 0 | 90 | 334 | 72 | 316 | 4.43e-132 | 379 |
MsG0180005729.01.T01 | MTR_5g005370 | 79.268 | 246 | 51 | 0 | 89 | 334 | 43 | 288 | 7.48e-132 | 378 |
MsG0180005729.01.T01 | MTR_5g005370 | 79.268 | 246 | 51 | 0 | 90 | 335 | 72 | 317 | 4.77e-131 | 379 |
MsG0180005729.01.T01 | MTR_8g066720 | 42.294 | 279 | 138 | 8 | 76 | 339 | 54 | 324 | 8.51e-62 | 202 |
MsG0180005729.01.T01 | MTR_4g105690 | 42.742 | 248 | 133 | 4 | 91 | 332 | 69 | 313 | 1.57e-61 | 199 |
MsG0180005729.01.T01 | MTR_3g067725 | 28.151 | 238 | 156 | 8 | 91 | 318 | 236 | 468 | 3.88e-16 | 79.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005729.01.T01 | AT4G08170 | 75.794 | 252 | 59 | 1 | 90 | 341 | 13 | 262 | 1.08e-129 | 371 |
MsG0180005729.01.T01 | AT4G08170 | 75.794 | 252 | 59 | 1 | 90 | 341 | 101 | 350 | 3.55e-129 | 374 |
MsG0180005729.01.T01 | AT4G08170 | 76.682 | 223 | 50 | 1 | 119 | 341 | 1 | 221 | 1.58e-113 | 329 |
MsG0180005729.01.T01 | AT4G08170 | 76.682 | 223 | 50 | 1 | 119 | 341 | 1 | 221 | 1.58e-113 | 329 |
MsG0180005729.01.T01 | AT4G08170 | 76.682 | 223 | 50 | 1 | 119 | 341 | 1 | 221 | 1.58e-113 | 329 |
MsG0180005729.01.T01 | AT4G08170 | 76.682 | 223 | 50 | 1 | 119 | 341 | 1 | 221 | 1.58e-113 | 329 |
MsG0180005729.01.T01 | AT4G08170 | 76.682 | 223 | 50 | 1 | 119 | 341 | 1 | 221 | 1.58e-113 | 329 |
MsG0180005729.01.T01 | AT4G33770 | 65.462 | 249 | 84 | 1 | 90 | 338 | 48 | 294 | 4.70e-109 | 320 |
MsG0180005729.01.T01 | AT4G33770 | 65.462 | 249 | 84 | 1 | 90 | 338 | 141 | 387 | 4.24e-108 | 321 |
MsG0180005729.01.T01 | AT4G33770 | 66.364 | 220 | 72 | 1 | 119 | 338 | 1 | 218 | 1.15e-94 | 281 |
MsG0180005729.01.T01 | AT5G16760 | 40.690 | 290 | 154 | 6 | 51 | 334 | 39 | 316 | 1.92e-64 | 207 |
MsG0180005729.01.T01 | AT2G43980 | 28.736 | 174 | 118 | 4 | 148 | 318 | 295 | 465 | 1.07e-15 | 78.2 |
Find 83 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAGTTTGCACTACTTTATT+TGG | 0.121328 | 1:+95377149 | None:intergenic |
TACAAACTTCATGGAGAATT+TGG | 0.129435 | 1:+95379673 | None:intergenic |
CTTCATAAATATTTGAAAAT+AGG | 0.164201 | 1:+95377539 | None:intergenic |
AAATCCTTCATTAATGAAAA+AGG | 0.178226 | 1:+95379621 | None:intergenic |
CTAAAATATTTGTTGAAATA+TGG | 0.207446 | 1:-95377247 | MsG0180005729.01.T01:three_prime_UTR |
TCTTACACTTGTTCTGCTTT+AGG | 0.209814 | 1:+95377686 | None:intergenic |
TTTCATTAATGAAGGATTTC+AGG | 0.219791 | 1:-95379617 | MsG0180005729.01.T01:CDS |
GTAGATATGATTCGTGAATA+TGG | 0.249264 | 1:-95377897 | MsG0180005729.01.T01:CDS |
AATCGTTAGTATTATTAGTT+TGG | 0.257470 | 1:-95380391 | MsG0180005729.01.T01:CDS |
TCCTCACTTGTTTGAATACT+TGG | 0.277969 | 1:+95380232 | None:intergenic |
ATTGATATCAATTACTTTCC+TGG | 0.288993 | 1:-95377852 | MsG0180005729.01.T01:intron |
ACTTGTTTGAATACTTGGTT+TGG | 0.321358 | 1:+95380237 | None:intergenic |
TCTTTAAGATTTATATTGTT+GGG | 0.323070 | 1:-95378307 | MsG0180005729.01.T01:CDS |
CTTCCAACTTCTCTTGCTTT+AGG | 0.340512 | 1:+95377651 | None:intergenic |
CTTGTTTGAATACTTGGTTT+GGG | 0.341169 | 1:+95380238 | None:intergenic |
TATTGTTGGGGAATACATAA+AGG | 0.342629 | 1:-95378294 | MsG0180005729.01.T01:CDS |
AGCATGAACATTCTATTCAT+TGG | 0.350260 | 1:+95377353 | None:intergenic |
AATAGAATGTTCATGCTTAG+TGG | 0.358768 | 1:-95377347 | MsG0180005729.01.T01:three_prime_UTR |
CTCTTTAAGATTTATATTGT+TGG | 0.359704 | 1:-95378308 | MsG0180005729.01.T01:CDS |
CCATCAAAATACAAACTTCA+TGG | 0.369216 | 1:+95379664 | None:intergenic |
ACACCCACCAAGACCTTTGT+TGG | 0.369643 | 1:-95378057 | MsG0180005729.01.T01:CDS |
CCAGCTTTGGTGACTTCATA+AGG | 0.370201 | 1:+95379147 | None:intergenic |
GGCCGGACAACCACATCTTC+TGG | 0.373243 | 1:-95380342 | MsG0180005729.01.T01:CDS |
AGCTCGCGTTTACTGATATT+AGG | 0.375570 | 1:+95378251 | None:intergenic |
TAACAACATTGTCTATAAAC+TGG | 0.377901 | 1:-95377294 | MsG0180005729.01.T01:three_prime_UTR |
CCTTATGAAGTCACCAAAGC+TGG | 0.387765 | 1:-95379147 | MsG0180005729.01.T01:CDS |
ATCGTTAGTATTATTAGTTT+GGG | 0.392746 | 1:-95380390 | MsG0180005729.01.T01:CDS |
GGAATCTCACCGGCAATACT+AGG | 0.399683 | 1:+95378152 | None:intergenic |
GTTTATAGACAATGTTGTTA+AGG | 0.401644 | 1:+95377297 | None:intergenic |
GTAAAGACGTGCTCGTAGTC+TGG | 0.410319 | 1:+95377724 | None:intergenic |
CGGCAACTTCAACCCAGCTT+TGG | 0.416268 | 1:+95379134 | None:intergenic |
GATCTTGATCCTAGTATTGC+CGG | 0.427389 | 1:-95378161 | MsG0180005729.01.T01:intron |
CTACAAGAGTTTGTCAATCA+TGG | 0.430927 | 1:-95378433 | MsG0180005729.01.T01:intron |
TTCAGAGCTTGAACCTCCAC+TGG | 0.437347 | 1:-95378458 | MsG0180005729.01.T01:CDS |
ACTTCATAAGGAATAGTAGA+TGG | 0.444777 | 1:+95379159 | None:intergenic |
AGCCTCTCCAACAAAGGTCT+TGG | 0.445162 | 1:+95378050 | None:intergenic |
AAAAGAGCTTCGTCATAGAT+TGG | 0.446522 | 1:-95378024 | MsG0180005729.01.T01:intron |
CTGCCTAAAGCAAGAGAAGT+TGG | 0.446556 | 1:-95377654 | MsG0180005729.01.T01:exon |
ATCCAGAAGATGTGGTTGTC+CGG | 0.458056 | 1:+95380340 | None:intergenic |
CTCTCCAACAAAGGTCTTGG+TGG | 0.458592 | 1:+95378053 | None:intergenic |
TAGATATGATTCGTGAATAT+GGG | 0.470110 | 1:-95377896 | MsG0180005729.01.T01:CDS |
GCTGCTGCACATGAAACTCT+TGG | 0.473192 | 1:+95378200 | None:intergenic |
TGTAAATGTTGAATTGCATC+AGG | 0.481257 | 1:+95379561 | None:intergenic |
CACATGAAACTCTTGGAAAA+CGG | 0.483083 | 1:+95378207 | None:intergenic |
CACCAAGACCTTTGTTGGAG+AGG | 0.502650 | 1:-95378052 | MsG0180005729.01.T01:CDS |
TTGTTTGAATACTTGGTTTG+GGG | 0.506145 | 1:+95380239 | None:intergenic |
TGTTTGAATACTTGGTTTGG+GGG | 0.507717 | 1:+95380240 | None:intergenic |
GGATCAAGAACGAATACATC+GGG | 0.519070 | 1:+95379585 | None:intergenic |
CCACATCTTGAAGCATGGAT+TGG | 0.521285 | 1:+95379532 | None:intergenic |
CATCTTGAAGCATGGATTGG+CGG | 0.525990 | 1:+95379535 | None:intergenic |
CTTTAAGATTTATATTGTTG+GGG | 0.527390 | 1:-95378306 | MsG0180005729.01.T01:CDS |
GCTGGGTTGAAGTTGCCGTT+AGG | 0.530540 | 1:-95379129 | MsG0180005729.01.T01:intron |
TTTGCAAGCCTCTCCAACAA+AGG | 0.530921 | 1:+95378044 | None:intergenic |
ATCCACCACATCTTGAAGCA+TGG | 0.535346 | 1:+95379527 | None:intergenic |
AATGACATAAAACACATCCT+TGG | 0.546362 | 1:+95377872 | None:intergenic |
TTTGGGAGTTGAGTATGACA+TGG | 0.550445 | 1:-95380373 | MsG0180005729.01.T01:CDS |
CCAATCCATGCTTCAAGATG+TGG | 0.557398 | 1:-95379532 | MsG0180005729.01.T01:CDS |
TGGTAGAAATTGGGACAGAG+TGG | 0.560116 | 1:+95377204 | None:intergenic |
CTTATGAAGTCACCAAAGCT+GGG | 0.565266 | 1:-95379146 | MsG0180005729.01.T01:CDS |
AGTTGCAAAACCTCTAGTTG+TGG | 0.567026 | 1:-95378533 | MsG0180005729.01.T01:CDS |
ATCCATGCTTCAAGATGTGG+TGG | 0.574463 | 1:-95379529 | MsG0180005729.01.T01:CDS |
GAGTATGACATGGAGGTGAT+TGG | 0.583214 | 1:-95380363 | MsG0180005729.01.T01:CDS |
TCTGATCATGATTCATGATG+AGG | 0.583455 | 1:+95380277 | None:intergenic |
CGCGAGCTATCAAAAGTCGC+AGG | 0.584140 | 1:-95378236 | MsG0180005729.01.T01:CDS |
TCTCCAACAAAGGTCTTGGT+GGG | 0.597564 | 1:+95378054 | None:intergenic |
ATGACATGGAGGTGATTGGC+CGG | 0.599011 | 1:-95380359 | MsG0180005729.01.T01:CDS |
CTAAAGCAAGAGAAGTTGGA+AGG | 0.600540 | 1:-95377650 | MsG0180005729.01.T01:exon |
GCACTGCCATCCACAACTAG+AGG | 0.603312 | 1:+95378523 | None:intergenic |
AAGCATATAACTAGCTACAA+AGG | 0.610187 | 1:+95377174 | None:intergenic |
GCAAAACCTCTAGTTGTGGA+TGG | 0.613529 | 1:-95378529 | MsG0180005729.01.T01:CDS |
CTAAACTTATCTGAGTGCAA+TGG | 0.614593 | 1:-95379504 | MsG0180005729.01.T01:intron |
TAAACTGGCACGAAATGCCA+AGG | 0.616821 | 1:-95377279 | MsG0180005729.01.T01:three_prime_UTR |
AACTCTTGTAGAACCAGTGG+AGG | 0.639928 | 1:+95378445 | None:intergenic |
AGGATCAAGAACGAATACAT+CGG | 0.641347 | 1:+95379584 | None:intergenic |
ACAAACTCTTGTAGAACCAG+TGG | 0.644820 | 1:+95378442 | None:intergenic |
TTGTAATAACTAGCTGACGA+GGG | 0.649097 | 1:+95379193 | None:intergenic |
GATTCGTGAATATGGGACCA+AGG | 0.655124 | 1:-95377889 | MsG0180005729.01.T01:CDS |
GGGAATACATAAAGGTTGTG+AGG | 0.657084 | 1:-95378286 | MsG0180005729.01.T01:CDS |
GGGAGTTGAGTATGACATGG+AGG | 0.666502 | 1:-95380370 | MsG0180005729.01.T01:CDS |
TTTGTAATAACTAGCTGACG+AGG | 0.667968 | 1:+95379192 | None:intergenic |
AAATGTTGAATTGCATCAGG+AGG | 0.678092 | 1:+95379564 | None:intergenic |
TGTGTGGTATCCAGAAGATG+TGG | 0.719199 | 1:+95380332 | None:intergenic |
AAATTATGTCAGAAGTTGTG+TGG | 0.741730 | 1:+95380316 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATATGTAATTACTAATT+AGG | - | Chr1:95377808-95377827 | MsG0180005729.01.T01:intron | 10.0% |
!! | AAATATGTAATTACTAATTA+GGG | - | Chr1:95377809-95377828 | MsG0180005729.01.T01:intron | 10.0% |
!!! | AATTAGTAATTACATATTTT+CGG | + | Chr1:95377808-95377827 | None:intergenic | 10.0% |
!!! | TTTTTTAACTTTTTGTTTTA+CGG | - | Chr1:95379744-95379763 | MsG0180005729.01.T01:intron | 10.0% |
!! | AAAATTGAAAGGAAAAAAAA+CGG | + | Chr1:95378966-95378985 | None:intergenic | 15.0% |
!! | AACTTGAAAAAATGAAAAAA+AGG | + | Chr1:95378231-95378250 | None:intergenic | 15.0% |
!! | CTTCATAAATATTTGAAAAT+AGG | + | Chr1:95379984-95380003 | None:intergenic | 15.0% |
!! | TATTGTAATTTATCTATTCA+TGG | + | Chr1:95377742-95377761 | None:intergenic | 15.0% |
!! | TTAATCTAAATAATTTGGTT+AGG | - | Chr1:95377324-95377343 | MsG0180005729.01.T01:three_prime_UTR | 15.0% |
!!! | CTAAAATATTTGTTGAAATA+TGG | - | Chr1:95380273-95380292 | MsG0180005729.01.T01:CDS | 15.0% |
!!! | CTATTTTCAAATATTTATGA+AGG | - | Chr1:95379982-95380001 | MsG0180005729.01.T01:intron | 15.0% |
!!! | TCTTTAAGATTTATATTGTT+GGG | - | Chr1:95379213-95379232 | MsG0180005729.01.T01:intron | 15.0% |
!! | AAATCCTTCATTAATGAAAA+AGG | + | Chr1:95377902-95377921 | None:intergenic | 20.0% |
!! | AATCCTTCATTAATGAAAAA+GGG | + | Chr1:95377901-95377920 | None:intergenic | 20.0% |
!! | AATCGTTAGTATTATTAGTT+TGG | - | Chr1:95377129-95377148 | MsG0180005729.01.T01:three_prime_UTR | 20.0% |
!! | ATCAAATTTCTTAAAGAACA+AGG | - | Chr1:95377487-95377506 | MsG0180005729.01.T01:three_prime_UTR | 20.0% |
!! | CATTTGGTATATAACATTAT+TGG | + | Chr1:95377543-95377562 | None:intergenic | 20.0% |
!! | GTATATTATATACTAGCTAT+TGG | - | Chr1:95378492-95378511 | MsG0180005729.01.T01:CDS | 20.0% |
!! | TGTGGTTAATCTAAATAATT+TGG | - | Chr1:95377319-95377338 | MsG0180005729.01.T01:three_prime_UTR | 20.0% |
!!! | ATCGTTAGTATTATTAGTTT+GGG | - | Chr1:95377130-95377149 | MsG0180005729.01.T01:three_prime_UTR | 20.0% |
!!! | CTCTTTAAGATTTATATTGT+TGG | - | Chr1:95379212-95379231 | MsG0180005729.01.T01:intron | 20.0% |
!!! | CTTGTTTTCCTTTTTTATTT+GGG | - | Chr1:95379172-95379191 | MsG0180005729.01.T01:CDS | 20.0% |
!!! | CTTTAAGATTTATATTGTTG+GGG | - | Chr1:95379214-95379233 | MsG0180005729.01.T01:intron | 20.0% |
!!! | TCAACTATTTTTGTACTTTT+TGG | - | Chr1:95378188-95378207 | MsG0180005729.01.T01:CDS | 20.0% |
!!! | TCTTGTTTTCCTTTTTTATT+TGG | - | Chr1:95379171-95379190 | MsG0180005729.01.T01:CDS | 20.0% |
! | AAAGTTTGCACTACTTTATT+TGG | + | Chr1:95380374-95380393 | None:intergenic | 25.0% |
! | AATAATACATTAAGTACACG+AGG | - | Chr1:95377641-95377660 | MsG0180005729.01.T01:three_prime_UTR | 25.0% |
! | AGTTGAAATGTTTCATCTTA+TGG | + | Chr1:95379420-95379439 | None:intergenic | 25.0% |
! | ATCCTTCATTAATGAAAAAG+GGG | + | Chr1:95377900-95377919 | None:intergenic | 25.0% |
! | ATCTATAAAATAACCAGACA+CGG | + | Chr1:95377569-95377588 | None:intergenic | 25.0% |
! | ATTGATATCAATTACTTTCC+TGG | - | Chr1:95379668-95379687 | MsG0180005729.01.T01:CDS | 25.0% |
! | CTAAATAGTAAACCAATCTT+TGG | + | Chr1:95378826-95378845 | None:intergenic | 25.0% |
! | CTAGAATATATCTGGTTAAT+AGG | - | Chr1:95378459-95378478 | MsG0180005729.01.T01:CDS | 25.0% |
! | GTTTATAGACAATGTTGTTA+AGG | + | Chr1:95380226-95380245 | None:intergenic | 25.0% |
! | TAAATAATTTGGTTAGGCAT+TGG | - | Chr1:95377330-95377349 | MsG0180005729.01.T01:three_prime_UTR | 25.0% |
! | TAACAACATTGTCTATAAAC+TGG | - | Chr1:95380226-95380245 | MsG0180005729.01.T01:intron | 25.0% |
! | TAGATATGATTCGTGAATAT+GGG | - | Chr1:95379624-95379643 | MsG0180005729.01.T01:CDS | 25.0% |
! | TTTCATTAATGAAGGATTTC+AGG | - | Chr1:95377903-95377922 | MsG0180005729.01.T01:CDS | 25.0% |
!! | AAAAAGTCAAATTTCTGAAG+AGG | + | Chr1:95377678-95377697 | None:intergenic | 25.0% |
!! | ATAACAGTGTTGTTAAATAG+CGG | - | Chr1:95378547-95378566 | MsG0180005729.01.T01:intron | 25.0% |
!! | TTGACAACATTTTGTACAAA+TGG | + | Chr1:95378631-95378650 | None:intergenic | 25.0% |
!! | TTTTGCAACTGAAAATTGAA+AGG | + | Chr1:95378977-95378996 | None:intergenic | 25.0% |
!!! | CTTAACTACTGTTGTTTTAT+AGG | - | Chr1:95378292-95378311 | MsG0180005729.01.T01:CDS | 25.0% |
!!! | TTGTTTTATTAGCCAAAGAT+TGG | - | Chr1:95378811-95378830 | MsG0180005729.01.T01:intron | 25.0% |
AAATTATGTCAGAAGTTGTG+TGG | + | Chr1:95377207-95377226 | None:intergenic | 30.0% | |
AAGCATATAACTAGCTACAA+AGG | + | Chr1:95380349-95380368 | None:intergenic | 30.0% | |
AATAACACACAGAATGATTG+CGG | + | Chr1:95379133-95379152 | None:intergenic | 30.0% | |
AATAGAATGTTCATGCTTAG+TGG | - | Chr1:95380173-95380192 | MsG0180005729.01.T01:intron | 30.0% | |
AATCAAAGATACACACCTAA+CGG | + | Chr1:95378409-95378428 | None:intergenic | 30.0% | |
AATCTTCTGATTATCCTGAT+TGG | - | Chr1:95378879-95378898 | MsG0180005729.01.T01:intron | 30.0% | |
AATGACATAAAACACATCCT+TGG | + | Chr1:95379651-95379670 | None:intergenic | 30.0% | |
AATTTCTTAAAGAACAAGGC+TGG | - | Chr1:95377491-95377510 | MsG0180005729.01.T01:three_prime_UTR | 30.0% | |
ACAGACAATAATTCGTTCTT+TGG | + | Chr1:95377369-95377388 | None:intergenic | 30.0% | |
ACTATCACAATAATATGGCA+TGG | - | Chr1:95377462-95377481 | MsG0180005729.01.T01:three_prime_UTR | 30.0% | |
ACTTCATAAGGAATAGTAGA+TGG | + | Chr1:95378364-95378383 | None:intergenic | 30.0% | |
ACTTGTTTGAATACTTGGTT+TGG | + | Chr1:95377286-95377305 | None:intergenic | 30.0% | |
AGATATAATGAAAGCTGCAT+CGG | - | Chr1:95377589-95377608 | MsG0180005729.01.T01:three_prime_UTR | 30.0% | |
AGCATGAACATTCTATTCAT+TGG | + | Chr1:95380170-95380189 | None:intergenic | 30.0% | |
ATATCCGAATGATACAAACA+AGG | + | Chr1:95378779-95378798 | None:intergenic | 30.0% | |
ATCTATTCATGGAACTATTC+AGG | + | Chr1:95377731-95377750 | None:intergenic | 30.0% | |
ATCTTCTGATTATCCTGATT+GGG | - | Chr1:95378880-95378899 | MsG0180005729.01.T01:intron | 30.0% | |
CAGACAATAATTCGTTCTTT+GGG | + | Chr1:95377368-95377387 | None:intergenic | 30.0% | |
CCATCAAAATACAAACTTCA+TGG | + | Chr1:95377859-95377878 | None:intergenic | 30.0% | |
CTTGTTTGAATACTTGGTTT+GGG | + | Chr1:95377285-95377304 | None:intergenic | 30.0% | |
GCTATGAATATTTGGAAGAA+AGG | + | Chr1:95377782-95377801 | None:intergenic | 30.0% | |
GTACAATCCTAAAACTTTCA+GGG | + | Chr1:95378097-95378116 | None:intergenic | 30.0% | |
GTAGATATGATTCGTGAATA+TGG | - | Chr1:95379623-95379642 | MsG0180005729.01.T01:CDS | 30.0% | |
TACAAACTTCATGGAGAATT+TGG | + | Chr1:95377850-95377869 | None:intergenic | 30.0% | |
TACAATCCTAAAACTTTCAG+GGG | + | Chr1:95378096-95378115 | None:intergenic | 30.0% | |
TAGCGACTATCACAATAATA+TGG | - | Chr1:95377457-95377476 | MsG0180005729.01.T01:three_prime_UTR | 30.0% | |
TATAACTTATCTGCATTCCA+TGG | - | Chr1:95379695-95379714 | MsG0180005729.01.T01:intron | 30.0% | |
TATTGTTGGGGAATACATAA+AGG | - | Chr1:95379226-95379245 | MsG0180005729.01.T01:intron | 30.0% | |
TCTCTAGACTAGAATATATC+TGG | - | Chr1:95378451-95378470 | MsG0180005729.01.T01:CDS | 30.0% | |
TGAAATGTTTCATCTTATGG+TGG | + | Chr1:95379417-95379436 | None:intergenic | 30.0% | |
TGCAATGTCCCAAATAAAAA+AGG | + | Chr1:95379183-95379202 | None:intergenic | 30.0% | |
TGTAAATGTTGAATTGCATC+AGG | + | Chr1:95377962-95377981 | None:intergenic | 30.0% | |
TGTACAATCCTAAAACTTTC+AGG | + | Chr1:95378098-95378117 | None:intergenic | 30.0% | |
! | ACGAATTATTGTCTGTCTTT+TGG | - | Chr1:95377373-95377392 | MsG0180005729.01.T01:three_prime_UTR | 30.0% |
! | AGAACCTTGTTTGTATCATT+CGG | - | Chr1:95378772-95378791 | MsG0180005729.01.T01:intron | 30.0% |
! | ATATTTGAAACAACCCAATC+AGG | + | Chr1:95378896-95378915 | None:intergenic | 30.0% |
! | TTGTTTGAATACTTGGTTTG+GGG | + | Chr1:95377284-95377303 | None:intergenic | 30.0% |
!! | AGGTACTTTTTGGTAGAAAT+TGG | + | Chr1:95380329-95380348 | None:intergenic | 30.0% |
!! | CCATGAAGTTTGTATTTTGA+TGG | - | Chr1:95377856-95377875 | MsG0180005729.01.T01:CDS | 30.0% |
!! | GGTACTTTTTGGTAGAAATT+GGG | + | Chr1:95380328-95380347 | None:intergenic | 30.0% |
!! | TTCCCCTTTTTCATTAATGA+AGG | - | Chr1:95377895-95377914 | MsG0180005729.01.T01:CDS | 30.0% |
!!! | GAATTTTTTTGGAATCTCAC+CGG | + | Chr1:95379381-95379400 | None:intergenic | 30.0% |
!!! | TATTTTAGCAGCATTATCCT+TGG | + | Chr1:95380261-95380280 | None:intergenic | 30.0% |
!!! | TTTTTTATTTGGGACATTGC+AGG | - | Chr1:95379182-95379201 | MsG0180005729.01.T01:CDS | 30.0% |
AAAAGAGCTTCGTCATAGAT+TGG | - | Chr1:95379496-95379515 | MsG0180005729.01.T01:intron | 35.0% | |
AAATGTTGAATTGCATCAGG+AGG | + | Chr1:95377959-95377978 | None:intergenic | 35.0% | |
AATGTTTCATCTTATGGTGG+TGG | + | Chr1:95379414-95379433 | None:intergenic | 35.0% | |
ACCAAGTATTCAAACAAGTG+AGG | - | Chr1:95377287-95377306 | MsG0180005729.01.T01:three_prime_UTR | 35.0% | |
AGGATCAAGAACGAATACAT+CGG | + | Chr1:95377939-95377958 | None:intergenic | 35.0% | |
CACATGAAACTCTTGGAAAA+CGG | + | Chr1:95379316-95379335 | None:intergenic | 35.0% | |
CTAAACTTATCTGAGTGCAA+TGG | - | Chr1:95378016-95378035 | MsG0180005729.01.T01:intron | 35.0% | |
CTACAAGAGTTTGTCAATCA+TGG | - | Chr1:95379087-95379106 | MsG0180005729.01.T01:intron | 35.0% | |
GCAGATAAGTTATACTTACC+AGG | + | Chr1:95379689-95379708 | None:intergenic | 35.0% | |
GTATTAGTAAATCATCGCCT+AGG | + | Chr1:95379563-95379582 | None:intergenic | 35.0% | |
TATTCATGGAACTATTCAGG+AGG | + | Chr1:95377728-95377747 | None:intergenic | 35.0% | |
TCCTCACTTGTTTGAATACT+TGG | + | Chr1:95377291-95377310 | None:intergenic | 35.0% | |
TCTGATCATGATTCATGATG+AGG | + | Chr1:95377246-95377265 | None:intergenic | 35.0% | |
TCTTACACTTGTTCTGCTTT+AGG | + | Chr1:95379837-95379856 | None:intergenic | 35.0% | |
TGCAACCATATTTCTTTCCT+AGG | - | Chr1:95379543-95379562 | MsG0180005729.01.T01:CDS | 35.0% | |
TTCGGTGAGCTATGAATATT+TGG | + | Chr1:95377790-95377809 | None:intergenic | 35.0% | |
TTGTAATAACTAGCTGACGA+GGG | + | Chr1:95378330-95378349 | None:intergenic | 35.0% | |
TTGTCAAATAGCAGCTATAG+CGG | - | Chr1:95378644-95378663 | MsG0180005729.01.T01:intron | 35.0% | |
TTTGTAATAACTAGCTGACG+AGG | + | Chr1:95378331-95378350 | None:intergenic | 35.0% | |
TTTGTACAAATGGCATATCG+TGG | + | Chr1:95378621-95378640 | None:intergenic | 35.0% | |
! | ATTTTTCCATACCCTGCATT+CGG | + | Chr1:95379775-95379794 | None:intergenic | 35.0% |
!! | ATAATTTGGTTAGGCATTGG+TGG | - | Chr1:95377333-95377352 | MsG0180005729.01.T01:three_prime_UTR | 35.0% |
!! | CAAGTGAGGATTTACTTTTG+TGG | - | Chr1:95377301-95377320 | MsG0180005729.01.T01:three_prime_UTR | 35.0% |
!! | CAAGTTGATTATGTATCGCA+TGG | - | Chr1:95378245-95378264 | MsG0180005729.01.T01:CDS | 35.0% |
!! | TGTTTGAATACTTGGTTTGG+GGG | + | Chr1:95377283-95377302 | None:intergenic | 35.0% |
!!! | AGTTGACTTGTGCATTTTCA+TGG | - | Chr1:95378848-95378867 | MsG0180005729.01.T01:intron | 35.0% |
!!! | CTACTGTTGTTTTATAGGCA+AGG | - | Chr1:95378297-95378316 | MsG0180005729.01.T01:CDS | 35.0% |
!!! | CTAGCTACAAAGGTACTTTT+TGG | + | Chr1:95380339-95380358 | None:intergenic | 35.0% |
!!! | TGTATTTTGATGGAGCTGAT+TGG | - | Chr1:95377866-95377885 | MsG0180005729.01.T01:CDS | 35.0% |
!!! | TGTTGTTTTATAGGCAAGGT+TGG | - | Chr1:95378301-95378320 | MsG0180005729.01.T01:CDS | 35.0% |
ACAAACTCTTGTAGAACCAG+TGG | + | Chr1:95379081-95379100 | None:intergenic | 40.0% | |
AGCTCGCGTTTACTGATATT+AGG | + | Chr1:95379272-95379291 | None:intergenic | 40.0% | |
AGTTGCAAAACCTCTAGTTG+TGG | - | Chr1:95378987-95379006 | MsG0180005729.01.T01:intron | 40.0% | |
ATAATGAAAGCTGCATCGGA+GGG | - | Chr1:95377593-95377612 | MsG0180005729.01.T01:three_prime_UTR | 40.0% | |
CATCGCCTAGGAAAGAAATA+TGG | + | Chr1:95379551-95379570 | None:intergenic | 40.0% | |
CATTAAGTACACGAGGAATC+TGG | - | Chr1:95377648-95377667 | MsG0180005729.01.T01:three_prime_UTR | 40.0% | |
CGTACATCTTGCTCTTGTAT+TGG | - | Chr1:95378156-95378175 | MsG0180005729.01.T01:intron | 40.0% | |
CTAAAACTTTCAGGGGAGAT+TGG | + | Chr1:95378089-95378108 | None:intergenic | 40.0% | |
CTAAAGCAAGAGAAGTTGGA+AGG | - | Chr1:95379870-95379889 | MsG0180005729.01.T01:intron | 40.0% | |
CTTATGAAGTCACCAAAGCT+GGG | - | Chr1:95378374-95378393 | MsG0180005729.01.T01:intron | 40.0% | |
CTTCCAACTTCTCTTGCTTT+AGG | + | Chr1:95379872-95379891 | None:intergenic | 40.0% | |
GAATTGCAATGCCGTCTATA+GGG | - | Chr1:95379584-95379603 | MsG0180005729.01.T01:CDS | 40.0% | |
GATCTTGATCCTAGTATTGC+CGG | - | Chr1:95379359-95379378 | MsG0180005729.01.T01:intron | 40.0% | |
GGATCAAGAACGAATACATC+GGG | + | Chr1:95377938-95377957 | None:intergenic | 40.0% | |
GGGAATACATAAAGGTTGTG+AGG | - | Chr1:95379234-95379253 | MsG0180005729.01.T01:intron | 40.0% | |
TATAATGAAAGCTGCATCGG+AGG | - | Chr1:95377592-95377611 | MsG0180005729.01.T01:three_prime_UTR | 40.0% | |
TGAATTGCAATGCCGTCTAT+AGG | - | Chr1:95379583-95379602 | MsG0180005729.01.T01:CDS | 40.0% | |
TTGATTTCTGTCAGAGACCA+TGG | + | Chr1:95379715-95379734 | None:intergenic | 40.0% | |
TTTGGGAGTTGAGTATGACA+TGG | - | Chr1:95377147-95377166 | MsG0180005729.01.T01:three_prime_UTR | 40.0% | |
! | CAATCTCCCCTGAAAGTTTT+AGG | - | Chr1:95378087-95378106 | MsG0180005729.01.T01:intron | 40.0% |
! | TTACGGTTTTTCCGAATGCA+GGG | - | Chr1:95379761-95379780 | MsG0180005729.01.T01:intron | 40.0% |
! | TTTACGGTTTTTCCGAATGC+AGG | - | Chr1:95379760-95379779 | MsG0180005729.01.T01:intron | 40.0% |
! | TTTATTTGGGACATTGCAGG+TGG | - | Chr1:95379185-95379204 | MsG0180005729.01.T01:CDS | 40.0% |
!! | TAGCAGCTATAGCGGATTAA+CGG | - | Chr1:95378652-95378671 | MsG0180005729.01.T01:intron | 40.0% |
!! | TTTCATCTTATGGTGGTGGT+GGG | + | Chr1:95379410-95379429 | None:intergenic | 40.0% |
!!! | GTGGGAAAGGGGAATTTTTT+TGG | + | Chr1:95379392-95379411 | None:intergenic | 40.0% |
AACCAATCAATGCCGCAGAA+AGG | + | Chr1:95378520-95378539 | None:intergenic | 45.0% | |
AACTCTTGTAGAACCAGTGG+AGG | + | Chr1:95379078-95379097 | None:intergenic | 45.0% | |
ACAAGCGAAGTCCCTATAGA+CGG | + | Chr1:95379598-95379617 | None:intergenic | 45.0% | |
ATACCAAATGCAACCGTGTC+TGG | - | Chr1:95377553-95377572 | MsG0180005729.01.T01:three_prime_UTR | 45.0% | |
ATCCACCACATCTTGAAGCA+TGG | + | Chr1:95377996-95378015 | None:intergenic | 45.0% | |
ATCCAGAAGATGTGGTTGTC+CGG | + | Chr1:95377183-95377202 | None:intergenic | 45.0% | |
ATCCATGCTTCAAGATGTGG+TGG | - | Chr1:95377991-95378010 | MsG0180005729.01.T01:intron | 45.0% | |
CCAATCCATGCTTCAAGATG+TGG | - | Chr1:95377988-95378007 | MsG0180005729.01.T01:intron | 45.0% | |
CCACATCTTGAAGCATGGAT+TGG | + | Chr1:95377991-95378010 | None:intergenic | 45.0% | |
CCTTATGAAGTCACCAAAGC+TGG | - | Chr1:95378373-95378392 | MsG0180005729.01.T01:intron | 45.0% | |
CTGCCTAAAGCAAGAGAAGT+TGG | - | Chr1:95379866-95379885 | MsG0180005729.01.T01:intron | 45.0% | |
GAGTATGACATGGAGGTGAT+TGG | - | Chr1:95377157-95377176 | MsG0180005729.01.T01:three_prime_UTR | 45.0% | |
GATGACTAACTTCTGACAGC+TGG | - | Chr1:95377615-95377634 | MsG0180005729.01.T01:three_prime_UTR | 45.0% | |
GATTCGTGAATATGGGACCA+AGG | - | Chr1:95379631-95379650 | MsG0180005729.01.T01:CDS | 45.0% | |
GCAAAACCTCTAGTTGTGGA+TGG | - | Chr1:95378991-95379010 | MsG0180005729.01.T01:intron | 45.0% | |
GTGTTGTCAATAGCAGGTCA+CGG | + | Chr1:95378724-95378743 | None:intergenic | 45.0% | |
TAAACTGGCACGAAATGCCA+AGG | - | Chr1:95380241-95380260 | MsG0180005729.01.T01:CDS | 45.0% | |
TAACCAGACACGGTTGCATT+TGG | + | Chr1:95377559-95377578 | None:intergenic | 45.0% | |
TAGCTATTGGCACCTTTCTG+CGG | - | Chr1:95378505-95378524 | MsG0180005729.01.T01:CDS | 45.0% | |
TCTCCAACAAAGGTCTTGGT+GGG | + | Chr1:95379469-95379488 | None:intergenic | 45.0% | |
TGACCTGCTATTGACAACAC+TGG | - | Chr1:95378724-95378743 | MsG0180005729.01.T01:intron | 45.0% | |
TGGTAGAAATTGGGACAGAG+TGG | + | Chr1:95380319-95380338 | None:intergenic | 45.0% | |
TGTGTGGTATCCAGAAGATG+TGG | + | Chr1:95377191-95377210 | None:intergenic | 45.0% | |
TTTGCAAGCCTCTCCAACAA+AGG | + | Chr1:95379479-95379498 | None:intergenic | 45.0% | |
! | CCAGCTTTGGTGACTTCATA+AGG | + | Chr1:95378376-95378395 | None:intergenic | 45.0% |
! | GTTTTTCCGAATGCAGGGTA+TGG | - | Chr1:95379766-95379785 | MsG0180005729.01.T01:intron | 45.0% |
!! | CATCTTGAAGCATGGATTGG+CGG | + | Chr1:95377988-95378007 | None:intergenic | 45.0% |
!! | GTTTCATCTTATGGTGGTGG+TGG | + | Chr1:95379411-95379430 | None:intergenic | 45.0% |
ACACCCACCAAGACCTTTGT+TGG | - | Chr1:95379463-95379482 | MsG0180005729.01.T01:intron | 50.0% | |
AGCCTCTCCAACAAAGGTCT+TGG | + | Chr1:95379473-95379492 | None:intergenic | 50.0% | |
ATGACATGGAGGTGATTGGC+CGG | - | Chr1:95377161-95377180 | MsG0180005729.01.T01:three_prime_UTR | 50.0% | |
CACCAAGACCTTTGTTGGAG+AGG | - | Chr1:95379468-95379487 | MsG0180005729.01.T01:intron | 50.0% | |
CTCTCCAACAAAGGTCTTGG+TGG | + | Chr1:95379470-95379489 | None:intergenic | 50.0% | |
GAGCCAGTGTTGTCAATAGC+AGG | + | Chr1:95378730-95378749 | None:intergenic | 50.0% | |
GCTGCTGCACATGAAACTCT+TGG | + | Chr1:95379323-95379342 | None:intergenic | 50.0% | |
GCTGGCTGAGCTTATAGGTT+AGG | - | Chr1:95377509-95377528 | MsG0180005729.01.T01:three_prime_UTR | 50.0% | |
GGAATCTCACCGGCAATACT+AGG | + | Chr1:95379371-95379390 | None:intergenic | 50.0% | |
GGGAGTTGAGTATGACATGG+AGG | - | Chr1:95377150-95377169 | MsG0180005729.01.T01:three_prime_UTR | 50.0% | |
GTAAAGACGTGCTCGTAGTC+TGG | + | Chr1:95379799-95379818 | None:intergenic | 50.0% | |
TTCAGAGCTTGAACCTCCAC+TGG | - | Chr1:95379062-95379081 | MsG0180005729.01.T01:intron | 50.0% | |
! | ACAAGGCTGGCTGAGCTTAT+AGG | - | Chr1:95377504-95377523 | MsG0180005729.01.T01:three_prime_UTR | 50.0% |
!! | AGCGGATTAACGGCGCTATA+GGG | - | Chr1:95378662-95378681 | MsG0180005729.01.T01:intron | 50.0% |
!! | CACCTTTCTGCGGCATTGAT+TGG | - | Chr1:95378515-95378534 | MsG0180005729.01.T01:CDS | 50.0% |
!! | CTTATGGTGGTGGTGGGAAA+GGG | + | Chr1:95379404-95379423 | None:intergenic | 50.0% |
!! | TAGCGGATTAACGGCGCTAT+AGG | - | Chr1:95378661-95378680 | MsG0180005729.01.T01:intron | 50.0% |
!! | TCTTATGGTGGTGGTGGGAA+AGG | + | Chr1:95379405-95379424 | None:intergenic | 50.0% |
!! | TTATGGTGGTGGTGGGAAAG+GGG | + | Chr1:95379403-95379422 | None:intergenic | 50.0% |
ATAGCAGCGCTACAGCACAG+TGG | - | Chr1:95378572-95378591 | MsG0180005729.01.T01:intron | 55.0% | |
CGCGAGCTATCAAAAGTCGC+AGG | - | Chr1:95379284-95379303 | MsG0180005729.01.T01:intron | 55.0% | |
CGGCAACTTCAACCCAGCTT+TGG | + | Chr1:95378389-95378408 | None:intergenic | 55.0% | |
GCACTGCCATCCACAACTAG+AGG | + | Chr1:95379000-95379019 | None:intergenic | 55.0% | |
! | GCTGGGTTGAAGTTGCCGTT+AGG | - | Chr1:95378391-95378410 | MsG0180005729.01.T01:intron | 55.0% |
GGCCGGACAACCACATCTTC+TGG | - | Chr1:95377178-95377197 | MsG0180005729.01.T01:three_prime_UTR | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 95377115 | 95380427 | 95377115 | ID=MsG0180005729.01;Name=MsG0180005729.01 |
Chr1 | mRNA | 95377115 | 95380427 | 95377115 | ID=MsG0180005729.01.T01;Parent=MsG0180005729.01;Name=MsG0180005729.01.T01;_AED=0.44;_eAED=0.46;_QI=0|0.85|0.75|1|0.85|0.75|8|554|341 |
Chr1 | exon | 95377115 | 95377760 | 95377115 | ID=MsG0180005729.01.T01:exon:10457;Parent=MsG0180005729.01.T01 |
Chr1 | exon | 95377853 | 95377937 | 95377853 | ID=MsG0180005729.01.T01:exon:10456;Parent=MsG0180005729.01.T01 |
Chr1 | exon | 95378025 | 95378080 | 95378025 | ID=MsG0180005729.01.T01:exon:10455;Parent=MsG0180005729.01.T01 |
Chr1 | exon | 95378162 | 95378338 | 95378162 | ID=MsG0180005729.01.T01:exon:10454;Parent=MsG0180005729.01.T01 |
Chr1 | exon | 95378434 | 95378553 | 95378434 | ID=MsG0180005729.01.T01:exon:10453;Parent=MsG0180005729.01.T01 |
Chr1 | exon | 95379130 | 95379228 | 95379130 | ID=MsG0180005729.01.T01:exon:10452;Parent=MsG0180005729.01.T01 |
Chr1 | exon | 95379505 | 95379712 | 95379505 | ID=MsG0180005729.01.T01:exon:10451;Parent=MsG0180005729.01.T01 |
Chr1 | exon | 95380239 | 95380427 | 95380239 | ID=MsG0180005729.01.T01:exon:10450;Parent=MsG0180005729.01.T01 |
Chr1 | CDS | 95380239 | 95380427 | 95380239 | ID=MsG0180005729.01.T01:cds;Parent=MsG0180005729.01.T01 |
Chr1 | CDS | 95379505 | 95379712 | 95379505 | ID=MsG0180005729.01.T01:cds;Parent=MsG0180005729.01.T01 |
Chr1 | CDS | 95379130 | 95379228 | 95379130 | ID=MsG0180005729.01.T01:cds;Parent=MsG0180005729.01.T01 |
Chr1 | CDS | 95378434 | 95378553 | 95378434 | ID=MsG0180005729.01.T01:cds;Parent=MsG0180005729.01.T01 |
Chr1 | CDS | 95378162 | 95378338 | 95378162 | ID=MsG0180005729.01.T01:cds;Parent=MsG0180005729.01.T01 |
Chr1 | CDS | 95378025 | 95378080 | 95378025 | ID=MsG0180005729.01.T01:cds;Parent=MsG0180005729.01.T01 |
Chr1 | CDS | 95377853 | 95377937 | 95377853 | ID=MsG0180005729.01.T01:cds;Parent=MsG0180005729.01.T01 |
Chr1 | CDS | 95377669 | 95377760 | 95377669 | ID=MsG0180005729.01.T01:cds;Parent=MsG0180005729.01.T01 |
Chr1 | three_prime_UTR | 95377115 | 95377668 | 95377115 | ID=MsG0180005729.01.T01:three_prime_utr;Parent=MsG0180005729.01.T01 |
Gene Sequence |
Protein sequence |