AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040920.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040920.01.T01 MTR_7g101070 80.287 279 35 2 50 322 163 427 4.70e-147 424
MsG0780040920.01.T01 MTR_7g101070 80.000 70 8 1 38 101 36 105 7.23e-26 108
MsG0780040920.01.T01 MTR_2g014470 60.000 65 26 0 253 317 4 68 1.38e-20 91.7
MsG0780040920.01.T01 MTR_2g014480 60.000 65 26 0 253 317 4 68 6.73e-20 89.7
MsG0780040920.01.T01 MTR_4g078850 56.923 65 28 0 253 317 4 68 7.85e-20 89.7
MsG0780040920.01.T01 MTR_2g090705 55.385 65 29 0 253 317 4 68 9.29e-20 89.4
MsG0780040920.01.T01 MTR_4g015840 55.385 65 29 0 253 317 4 68 3.20e-19 87.8
MsG0780040920.01.T01 MTR_3g108020 53.846 65 30 0 253 317 4 68 7.70e-19 86.7
MsG0780040920.01.T01 MTR_7g109340 62.121 66 24 1 252 317 25 89 1.07e-16 80.5
MsG0780040920.01.T01 MTR_3g027580 59.091 66 26 1 252 317 88 152 3.03e-16 80.1
MsG0780040920.01.T01 MTR_8g022310 49.333 75 33 1 249 318 6 80 4.16e-16 76.6
MsG0780040920.01.T01 MTR_8g022310 49.333 75 33 1 249 318 6 80 7.01e-16 75.5
MsG0780040920.01.T01 MTR_8g022310 49.333 75 33 1 249 318 6 80 1.49e-15 75.5
MsG0780040920.01.T01 MTR_5g065860 52.174 69 32 1 248 316 43 110 1.72e-15 73.2
MsG0780040920.01.T01 MTR_8g022310 49.333 75 33 1 249 318 6 80 2.09e-15 74.7
MsG0780040920.01.T01 MTR_3g087030 55.385 65 27 1 253 317 82 144 2.12e-15 77.4
MsG0780040920.01.T01 MTR_7g112360 50.000 68 31 1 254 318 17 84 5.71e-15 72.4
MsG0780040920.01.T01 MTR_2g104030 55.385 65 27 1 253 317 70 132 1.72e-14 74.7
MsG0780040920.01.T01 MTR_1g110310 51.515 66 31 1 251 316 14 78 2.10e-14 74.3
MsG0780040920.01.T01 MTR_7g112360 50.000 68 31 1 254 318 17 84 2.58e-14 68.9
MsG0780040920.01.T01 MTR_4g023470 54.545 66 29 1 252 317 85 149 3.33e-14 73.9
MsG0780040920.01.T01 MTR_5g037880 38.614 101 53 3 253 344 5 105 5.68e-14 71.6
MsG0780040920.01.T01 MTR_7g069480 52.941 68 30 1 249 316 23 88 2.68e-13 71.2
MsG0780040920.01.T01 MTR_8g006430 39.796 98 54 1 240 337 1 93 7.25e-13 69.7
MsG0780040920.01.T01 MTR_6g026940 47.059 68 32 1 253 316 2 69 2.14e-12 65.5
MsG0780040920.01.T01 MTR_5g035770 46.970 66 34 1 251 316 23 87 5.91e-12 67.0
MsG0780040920.01.T01 MTR_6g027110 45.588 68 33 1 253 316 2 69 8.16e-12 62.8
MsG0780040920.01.T01 MTR_3g437850 44.444 81 44 1 253 332 2 82 8.87e-12 63.2
MsG0780040920.01.T01 MTR_4g085070 50.000 62 28 1 260 318 19 80 1.00e-11 62.8
MsG0780040920.01.T01 MTR_2g436560 44.444 72 38 1 247 318 98 167 2.00e-11 65.1
MsG0780040920.01.T01 MTR_7g114150 39.316 117 62 3 206 316 15 128 2.04e-11 65.9
MsG0780040920.01.T01 MTR_6g027030 45.588 68 33 1 253 316 2 69 2.44e-11 63.2
MsG0780040920.01.T01 MTR_2g097690 46.875 64 32 1 255 318 77 138 4.31e-11 62.0
MsG0780040920.01.T01 MTR_2g436580 46.970 66 33 1 253 318 110 173 5.28e-11 62.4
MsG0780040920.01.T01 MTR_7g092380 45.333 75 40 1 251 325 20 93 8.00e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040920.01.T01 AT5G03160 64.621 277 77 3 53 323 179 440 4.50e-107 322
MsG0780040920.01.T01 AT5G03160 49.485 97 39 2 35 125 46 138 4.72e-15 76.6
MsG0780040920.01.T01 AT5G01390 55.385 65 29 0 253 317 4 68 8.37e-20 87.8
MsG0780040920.01.T01 AT5G25530 55.385 65 29 0 253 317 4 68 1.15e-19 89.0
MsG0780040920.01.T01 AT5G01390 55.385 65 29 0 253 317 4 68 1.46e-19 87.8
MsG0780040920.01.T01 AT5G01390 55.385 65 29 0 253 317 4 68 1.59e-19 86.7
MsG0780040920.01.T01 AT3G08910 53.846 65 30 0 253 317 4 68 2.65e-19 87.8
MsG0780040920.01.T01 AT4G28480 53.846 65 30 0 253 317 4 68 2.68e-19 87.4
MsG0780040920.01.T01 AT5G01390 55.385 65 29 0 253 317 4 68 3.23e-19 87.8
MsG0780040920.01.T01 AT4G28480 53.846 65 30 0 253 317 4 68 5.51e-19 87.4
MsG0780040920.01.T01 AT2G20560 53.846 65 30 0 253 317 4 68 7.73e-19 86.7
MsG0780040920.01.T01 AT1G10350 43.023 86 46 2 253 336 4 88 1.16e-17 83.6
MsG0780040920.01.T01 AT5G25530 49.315 73 29 1 253 317 4 76 5.38e-17 81.6
MsG0780040920.01.T01 AT1G59725 45.570 79 38 2 253 330 4 78 1.21e-16 80.5
MsG0780040920.01.T01 AT3G47940 55.385 65 28 1 253 316 4 68 2.51e-16 79.7
MsG0780040920.01.T01 AT2G22360 56.923 65 26 1 253 317 86 148 7.19e-16 79.0
MsG0780040920.01.T01 AT1G80030 51.948 77 35 1 241 317 63 137 8.60e-16 79.0
MsG0780040920.01.T01 AT1G80030 51.948 77 35 1 241 317 63 137 9.81e-16 78.6
MsG0780040920.01.T01 AT1G80030 51.948 77 35 1 241 317 63 137 9.81e-16 78.6
MsG0780040920.01.T01 AT1G80030 51.948 77 35 1 241 317 63 137 9.81e-16 78.6
MsG0780040920.01.T01 AT1G56300 49.296 71 33 1 251 318 11 81 1.46e-15 72.8
MsG0780040920.01.T01 AT1G56300 49.296 71 33 1 251 318 11 81 2.25e-15 73.2
MsG0780040920.01.T01 AT4G39960 55.385 65 27 1 253 317 85 147 2.46e-15 77.4
MsG0780040920.01.T01 AT4G39960 55.385 65 27 1 253 317 85 147 2.46e-15 77.4
MsG0780040920.01.T01 AT3G62600 59.091 66 26 1 252 317 25 89 3.12e-15 76.3
MsG0780040920.01.T01 AT5G48030 54.545 66 29 1 252 317 93 157 8.87e-15 75.5
MsG0780040920.01.T01 AT3G17830 45.946 74 38 1 244 317 54 125 3.88e-14 73.9
MsG0780040920.01.T01 AT1G71000 49.296 71 33 1 251 318 6 76 1.05e-13 68.9
MsG0780040920.01.T01 AT1G68370 42.529 87 48 2 249 334 13 98 1.96e-13 71.2
MsG0780040920.01.T01 AT1G71000 49.296 71 33 1 251 318 6 76 2.34e-13 67.8
MsG0780040920.01.T01 AT3G08970 50.000 78 37 1 249 326 23 98 2.34e-13 71.6
MsG0780040920.01.T01 AT3G08970 50.000 78 37 1 249 326 23 98 2.34e-13 71.6
MsG0780040920.01.T01 AT1G72416 36.145 83 51 1 250 330 2 84 1.69e-12 66.2
MsG0780040920.01.T01 AT5G16650 51.471 68 32 1 249 316 7 73 2.29e-12 65.1
MsG0780040920.01.T01 AT2G33735 47.059 68 35 1 252 319 21 87 2.90e-12 63.5
MsG0780040920.01.T01 AT2G33735 47.059 68 35 1 252 319 21 87 2.90e-12 63.5
MsG0780040920.01.T01 AT1G59980 46.269 67 35 1 250 316 20 85 4.93e-12 67.0
MsG0780040920.01.T01 AT5G16650 51.471 68 32 1 249 316 7 73 4.96e-12 63.2
MsG0780040920.01.T01 AT3G14200 50.000 66 31 1 255 318 14 79 5.54e-12 65.1
MsG0780040920.01.T01 AT1G72416 36.145 83 51 1 250 330 2 84 7.89e-12 63.9
MsG0780040920.01.T01 AT1G72416 36.145 83 51 1 250 330 2 84 9.04e-12 63.9
MsG0780040920.01.T01 AT1G59980 46.269 67 35 1 250 316 20 85 9.31e-12 66.2
MsG0780040920.01.T01 AT1G72416 36.145 83 51 1 250 330 2 84 9.56e-12 63.9
MsG0780040920.01.T01 AT5G06910 41.026 78 45 1 255 332 31 107 3.23e-11 63.9
MsG0780040920.01.T01 AT2G41000 37.143 70 40 1 253 318 3 72 3.61e-11 62.4
MsG0780040920.01.T01 AT5G05750 40.000 70 40 1 247 316 108 175 4.21e-11 63.5
MsG0780040920.01.T01 AT3G12170 42.857 77 43 1 249 325 7 82 7.84e-11 62.4

Find 80 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGGATTATTACAAGATTT+TGG 0.134713 7:+84291155 MsG0780040920.01.T01:CDS
AGGATGATTCTAATTGAAAA+TGG 0.168885 7:+84286617 None:intergenic
AAACAACTCAGCTGCATTTC+TGG 0.195745 7:-84288638 None:intergenic
AAAGCATCTCGAAGTATAAA+AGG 0.221656 7:+84288664 MsG0780040920.01.T01:CDS
TCAGGATGGGGTGGCGGCGG+CGG 0.286019 7:+84291603 MsG0780040920.01.T01:CDS
GGATGGGGTGGCGGCGGCGG+TGG 0.286357 7:+84291606 MsG0780040920.01.T01:CDS
GATCTAGGCGAAGACCTTTC+TGG 0.287530 7:-84289907 None:intergenic
AACTATTGATGCTCTTGTTC+AGG 0.296407 7:+84290292 MsG0780040920.01.T01:CDS
TGGGGTGGCGGCGGCGGTGG+AGG 0.346510 7:+84291609 MsG0780040920.01.T01:CDS
CGTATGCAGCAGCGATTTCT+CGG 0.352911 7:-84291290 None:intergenic
GGATGATTCTAATTGAAAAT+GGG 0.388496 7:+84286618 None:intergenic
CTTATCCGGGTGCCATTGTA+AGG 0.399906 7:-84291232 None:intergenic
ACATTATGTGCAAGATGGTC+AGG 0.406282 7:-84290174 None:intergenic
CACCCCATCCTGATTCTTCA+AGG 0.406575 7:-84291593 None:intergenic
GGCTGAAGATAATGCGAGTA+AGG 0.407097 7:+84290101 MsG0780040920.01.T01:intron
CTAAACTCTTGACGGAAGAC+TGG 0.409882 7:+84290529 MsG0780040920.01.T01:CDS
GTTCACTATGCTCAGGATCT+AGG 0.412241 7:-84289922 None:intergenic
AGCTTCACTACAACTGTTCA+AGG 0.413274 7:-84290253 None:intergenic
GCCTGTGTAAAGTGCTAGTC+AGG 0.413773 7:+84290211 MsG0780040920.01.T01:CDS
CATAGTCTTACTACAAGAAT+AGG 0.418088 7:-84286687 None:intergenic
GGGCAAGCTACGGGTGGCAG+TGG 0.421513 7:+84290122 MsG0780040920.01.T01:CDS
AGGGAGGACCTTGAAGAATC+AGG 0.427457 7:+84291585 MsG0780040920.01.T01:CDS
AGGTATGCTTCTGAAAGGTT+TGG 0.434008 7:-84288739 None:intergenic
TTCAATCCATTCGGTGGTGG+TGG 0.445135 7:+84291633 MsG0780040920.01.T01:CDS
CGGATAAGAATGTTGACAAA+AGG 0.448605 7:+84291247 MsG0780040920.01.T01:CDS
ACTTGCGAAGAACTGAAGCC+TGG 0.451633 7:-84288765 None:intergenic
GAATCAGGATGGGGTGGCGG+CGG 0.455504 7:+84291600 MsG0780040920.01.T01:CDS
GAAGAATCAGGATGGGGTGG+CGG 0.474779 7:+84291597 MsG0780040920.01.T01:CDS
CAGTTCTTCGCAAGTTATGC+AGG 0.476082 7:+84288773 MsG0780040920.01.T01:CDS
GAGGTCCACAGTTCGAAACT+TGG 0.478409 7:-84286645 None:intergenic
CAAGCTACGGGTGGCAGTGG+AGG 0.484614 7:+84290125 MsG0780040920.01.T01:CDS
GATTCTTCAAGGTCCTCCCT+TGG 0.490229 7:-84291582 None:intergenic
CATAATGTACATCTTCATCT+TGG 0.494888 7:+84290189 MsG0780040920.01.T01:CDS
TTCAGAAGCATACCTTTCCC+AGG 0.497787 7:+84288747 MsG0780040920.01.T01:CDS
GGTGGCAGTGGAGGAATTCA+AGG 0.501651 7:+84290134 MsG0780040920.01.T01:CDS
GGTGGAGGTTTCAATCCATT+CGG 0.510505 7:+84291624 MsG0780040920.01.T01:CDS
GGGAGAAGCTAAACTCTTGA+CGG 0.513362 7:+84290521 MsG0780040920.01.T01:CDS
GGTTTCAATCCATTCGGTGG+TGG 0.522209 7:+84291630 MsG0780040920.01.T01:CDS
AAGCATCTCGAAGTATAAAA+GGG 0.546866 7:+84288665 MsG0780040920.01.T01:CDS
GGATAAGAATGTTGACAAAA+GGG 0.547327 7:+84291248 MsG0780040920.01.T01:CDS
ATGCGAGTAAGGGCAAGCTA+CGG 0.560599 7:+84290112 MsG0780040920.01.T01:CDS
TGCGAGTAAGGGCAAGCTAC+GGG 0.563487 7:+84290113 MsG0780040920.01.T01:CDS
TGTAAAGTGCTAGTCAGGCT+TGG 0.567833 7:+84290216 MsG0780040920.01.T01:CDS
ATATTCAGGCATTACCAGAA+AGG 0.568306 7:+84289893 MsG0780040920.01.T01:intron
CTTGCGAAGAACTGAAGCCT+GGG 0.570619 7:-84288764 None:intergenic
TGCTGTCCACCACCACCGAA+TGG 0.571837 7:-84291639 None:intergenic
TTTAAAGATCAGCAAACGCA+AGG 0.572466 7:+84291137 MsG0780040920.01.T01:CDS
GGACCTTGAAGAATCAGGAT+GGG 0.581528 7:+84291590 MsG0780040920.01.T01:CDS
AGAAATCGCTGCTGCATACG+AGG 0.583278 7:+84291293 MsG0780040920.01.T01:CDS
TAAACTCTTGACGGAAGACT+GGG 0.583293 7:+84290530 MsG0780040920.01.T01:CDS
GTGCTAGTCAGGCTTGGCAG+AGG 0.590572 7:+84290222 MsG0780040920.01.T01:CDS
GTTTCGAACTGTGGACCTCA+CGG 0.602947 7:+84286649 MsG0780040920.01.T01:CDS
AGGTCCACAGTTCGAAACTT+GGG 0.605458 7:-84286644 None:intergenic
GAAGAACTGAAGCCTGGGAA+AGG 0.605583 7:-84288759 None:intergenic
AGGACCTTGAAGAATCAGGA+TGG 0.609537 7:+84291589 MsG0780040920.01.T01:CDS
GGAGGTTTCAATCCATTCGG+TGG 0.610043 7:+84291627 MsG0780040920.01.T01:CDS
GACCTTGAAGAATCAGGATG+GGG 0.611432 7:+84291591 MsG0780040920.01.T01:CDS
CATTATGTGCAAGATGGTCA+GGG 0.612509 7:-84290173 None:intergenic
ACAAGAAACTTGCCTTACAA+TGG 0.614939 7:+84291220 MsG0780040920.01.T01:CDS
ATATTCGTGAAGCATTAATG+AGG 0.615631 7:+84291103 MsG0780040920.01.T01:CDS
GCTGAAGATAATGCGAGTAA+GGG 0.618327 7:+84290102 MsG0780040920.01.T01:CDS
GGGAAAGGTATGCTTCTGAA+AGG 0.621313 7:-84288744 None:intergenic
CAAATGAAACACAAGACACA+AGG 0.626587 7:-84290335 None:intergenic
TATTCGTGAAGCATTAATGA+GGG 0.627259 7:+84291104 MsG0780040920.01.T01:CDS
TGACAAAAGGGAAGAAGCAG+AGG 0.631426 7:+84291260 MsG0780040920.01.T01:CDS
GCCTGACTAGCACTTTACAC+AGG 0.631954 7:-84290212 None:intergenic
GCACAAGATACGACCAAGGG+AGG 0.634824 7:+84291569 MsG0780040920.01.T01:CDS
CTTGAAGAATCAGGATGGGG+TGG 0.636087 7:+84291594 MsG0780040920.01.T01:CDS
GATGTACATTATGTGCAAGA+TGG 0.649387 7:-84290179 None:intergenic
CTCTTGACGGAAGACTGGGA+GGG 0.651624 7:+84290534 MsG0780040920.01.T01:CDS
ACTCTTGACGGAAGACTGGG+AGG 0.654965 7:+84290533 MsG0780040920.01.T01:CDS
AAACGCACAAGATACGACCA+AGG 0.660195 7:+84291565 MsG0780040920.01.T01:CDS
ACTTGCCTTACAATGGCACC+CGG 0.661475 7:+84291227 MsG0780040920.01.T01:CDS
GAGTAAGGGCAAGCTACGGG+TGG 0.668740 7:+84290116 MsG0780040920.01.T01:CDS
AACGCACAAGATACGACCAA+GGG 0.670534 7:+84291566 MsG0780040920.01.T01:CDS
AAGTTTCATCTTCCACCGTG+AGG 0.688314 7:-84286664 None:intergenic
AAAAGGGAAACATTATACTG+AGG 0.693246 7:+84288681 MsG0780040920.01.T01:CDS
GATACCCAAGTTTCGAACTG+TGG 0.709354 7:+84286640 MsG0780040920.01.T01:CDS
TGAAGCTCTTAAGATCGATG+AGG 0.710564 7:+84290269 MsG0780040920.01.T01:CDS
TCGAACTGTGGACCTCACGG+TGG 0.762413 7:+84286652 MsG0780040920.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAACATTAAATCAAAA+TGG - Chr7:84287225-84287244 None:intergenic 10.0%
!! AATAAACATTAAATCAAAAT+GGG - Chr7:84287224-84287243 None:intergenic 10.0%
!! TAAAGATATGAAATTTAATA+GGG - Chr7:84287256-84287275 None:intergenic 10.0%
!! TTAAAGATATGAAATTTAAT+AGG - Chr7:84287257-84287276 None:intergenic 10.0%
!!! AAATTATGTGTTTATTTTAA+AGG + Chr7:84287360-84287379 MsG0780040920.01.T01:intron 10.0%
!!! ATATGATAATGTTAATATTT+TGG + Chr7:84291040-84291059 MsG0780040920.01.T01:intron 10.0%
!!! ATGATTAAATTTTAGAATAT+TGG + Chr7:84290639-84290658 MsG0780040920.01.T01:intron 10.0%
!!! ATTTTATAGCTTTTATTTTT+TGG + Chr7:84287513-84287532 MsG0780040920.01.T01:intron 10.0%
!!! TTTTATAGCTTTTATTTTTT+GGG + Chr7:84287514-84287533 MsG0780040920.01.T01:intron 10.0%
!! AAACTAATATCTTAAAGTAT+AGG - Chr7:84289138-84289157 None:intergenic 15.0%
!! AAATATAATCTAATTCAAAC+AGG + Chr7:84288426-84288445 MsG0780040920.01.T01:intron 15.0%
!! AATATTTGCAATAAAACTTT+AGG + Chr7:84290976-84290995 MsG0780040920.01.T01:intron 15.0%
!! AGGATAATATTAGAAAAAAT+TGG - Chr7:84289855-84289874 None:intergenic 15.0%
!! ATAAACATTAAATCAAAATG+GGG - Chr7:84287223-84287242 None:intergenic 15.0%
!! CATTTATCATAAAATGAAAA+GGG + Chr7:84288040-84288059 MsG0780040920.01.T01:intron 15.0%
!! GGATAATATTAGAAAAAATT+GGG - Chr7:84289854-84289873 None:intergenic 15.0%
!! TACAAAAAAAAATAAATGGT+TGG - Chr7:84287188-84287207 None:intergenic 15.0%
!!! ATGAATATTTTGTTGAATAA+CGG + Chr7:84291504-84291523 MsG0780040920.01.T01:intron 15.0%
!!! TTAATCCTTAAATTTTCTTA+GGG + Chr7:84291753-84291772 MsG0780040920.01.T01:intron 15.0%
!! AATGCAAGAAATAAATAACA+AGG - Chr7:84290732-84290751 None:intergenic 20.0%
!! AATTCAATATATATTACCTG+AGG - Chr7:84290597-84290616 None:intergenic 20.0%
!! AGAAATTTGAACAATATATC+AGG - Chr7:84290004-84290023 None:intergenic 20.0%
!! AGGAATAGAAAGTAAATTTA+TGG - Chr7:84289517-84289536 None:intergenic 20.0%
!! ATCTTAAAGTATAGGATTTA+TGG - Chr7:84289130-84289149 None:intergenic 20.0%
!! CCATTTATCATAAAATGAAA+AGG + Chr7:84288039-84288058 MsG0780040920.01.T01:intron 20.0%
!! GAAAATAATGCATATAAAGT+TGG - Chr7:84289625-84289644 None:intergenic 20.0%
!! GAAATTTGAACAATATATCA+GGG - Chr7:84290003-84290022 None:intergenic 20.0%
!! GGTATATAGTATAGTATATA+AGG + Chr7:84288298-84288317 MsG0780040920.01.T01:intron 20.0%
!! TAGTTATAGAATTAGTAAAG+TGG - Chr7:84287862-84287881 None:intergenic 20.0%
!! TCAACAAAATATTCATATCT+AGG - Chr7:84291500-84291519 None:intergenic 20.0%
!! TCTTAAAGTATAGGATTTAT+GGG - Chr7:84289129-84289148 None:intergenic 20.0%
!!! AAAATCACAAGTTTTTTTCT+GGG + Chr7:84290366-84290385 MsG0780040920.01.T01:intron 20.0%
!!! AATTTTGCCAAAAGTTTTAA+GGG - Chr7:84288373-84288392 None:intergenic 20.0%
!!! ACAAATTCAGAGTTTATTTT+TGG - Chr7:84287638-84287657 None:intergenic 20.0%
!!! ATAGAATTTTGAAATCATTG+AGG + Chr7:84287000-84287019 MsG0780040920.01.T01:intron 20.0%
!!! CAAATTCAGAGTTTATTTTT+GGG - Chr7:84287637-84287656 None:intergenic 20.0%
!!! CCTTTTCATTTTATGATAAA+TGG - Chr7:84288042-84288061 None:intergenic 20.0%
!!! CTTAATCCTTAAATTTTCTT+AGG + Chr7:84291752-84291771 MsG0780040920.01.T01:intron 20.0%
!!! TATTATATACCATGCTTTTT+TGG + Chr7:84291397-84291416 MsG0780040920.01.T01:intron 20.0%
!!! TATTTCTTTGTTTTCCATAA+AGG + Chr7:84290080-84290099 MsG0780040920.01.T01:intron 20.0%
!!! TCAAAAAAGAAATTTTTGCT+AGG - Chr7:84290396-84290415 None:intergenic 20.0%
!!! TGAATATTTTGTTGAATAAC+GGG + Chr7:84291505-84291524 MsG0780040920.01.T01:intron 20.0%
!!! TTACGAATTTCATTTTTGAT+TGG + Chr7:84291723-84291742 MsG0780040920.01.T01:intron 20.0%
!!! TTATATGCATTATTTTCTTC+AGG + Chr7:84289628-84289647 MsG0780040920.01.T01:intron 20.0%
!!! TTTTTCATCATTCTTTCTTT+GGG + Chr7:84290043-84290062 MsG0780040920.01.T01:intron 20.0%
! AAAAGAAAAAGAAAACTACC+AGG - Chr7:84290880-84290899 None:intergenic 25.0%
! AAAATCATATGATGTCATTG+TGG - Chr7:84287925-84287944 None:intergenic 25.0%
! AAAGTTAATGCCTAAGTATT+GGG + Chr7:84289560-84289579 MsG0780040920.01.T01:intron 25.0%
! AAATACTGTATTTCGTTGAT+AGG + Chr7:84288094-84288113 MsG0780040920.01.T01:intron 25.0%
! AAGTGAGAAATTGAAACATT+TGG - Chr7:84286915-84286934 None:intergenic 25.0%
! AATATTATCCTGCTTATATG+TGG + Chr7:84289864-84289883 MsG0780040920.01.T01:intron 25.0%
! AATGATATCACTATCCAATT+AGG - Chr7:84289245-84289264 None:intergenic 25.0%
! AATGGTATATAGAAAGAGTT+AGG + Chr7:84287609-84287628 MsG0780040920.01.T01:intron 25.0%
! ACAACACAAATAAAAACCTA+AGG - Chr7:84287339-84287358 None:intergenic 25.0%
! AGAAAGTAAATTTATGGATG+TGG - Chr7:84289511-84289530 None:intergenic 25.0%
! AGAAATTGAAACATTTGGAA+AGG - Chr7:84286910-84286929 None:intergenic 25.0%
! ATATTATCCTGCTTATATGT+GGG + Chr7:84289865-84289884 MsG0780040920.01.T01:intron 25.0%
! ATCTCAATGCTTAATCTTAT+TGG + Chr7:84287026-84287045 MsG0780040920.01.T01:intron 25.0%
! CTTAAAGTATAGGATTTATG+GGG - Chr7:84289128-84289147 None:intergenic 25.0%
! GAAATTGAAACATTTGGAAA+GGG - Chr7:84286909-84286928 None:intergenic 25.0%
! TAAACCATAGCATAAAACAA+CGG - Chr7:84287978-84287997 None:intergenic 25.0%
! TATAGTGCAATTAACAAACT+TGG - Chr7:84288274-84288293 None:intergenic 25.0%
! TATATTAGAAAATACCTGCA+CGG + Chr7:84290920-84290939 MsG0780040920.01.T01:intron 25.0%
! TATCAACGAAATACAGTATT+TGG - Chr7:84288095-84288114 None:intergenic 25.0%
! TATCCTTATGAAACAGAAAT+TGG - Chr7:84288885-84288904 None:intergenic 25.0%
! TCTAGAGAAGTAATAAAGTT+AGG - Chr7:84288538-84288557 None:intergenic 25.0%
! TGTAGTTTGAATTTGAACAT+TGG + Chr7:84287551-84287570 MsG0780040920.01.T01:intron 25.0%
! TTAAAGTATAGGATTTATGG+GGG - Chr7:84289127-84289146 None:intergenic 25.0%
! TTGCACATAATTACTTATCT+TGG + Chr7:84290481-84290500 MsG0780040920.01.T01:intron 25.0%
! TTGTTAATTGCACTATATTG+TGG + Chr7:84288277-84288296 MsG0780040920.01.T01:intron 25.0%
! TTTCCAATTTCTGTTTCATA+AGG + Chr7:84288879-84288898 MsG0780040920.01.T01:intron 25.0%
! TTTCTATATACCATTCAAAC+AGG - Chr7:84287604-84287623 None:intergenic 25.0%
! TTTGTGTGTTTATTAGAGTT+TGG + Chr7:84290750-84290769 MsG0780040920.01.T01:intron 25.0%
!! AAAAAGAAATTTTTGCTAGG+AGG - Chr7:84290393-84290412 None:intergenic 25.0%
!! AAAAGAAATTTTTGCTAGGA+GGG - Chr7:84290392-84290411 None:intergenic 25.0%
!! CAAGGATTATTACAAGATTT+TGG + Chr7:84291155-84291174 MsG0780040920.01.T01:CDS 25.0%
!! CAATTTTGCCAAAAGTTTTA+AGG - Chr7:84288374-84288393 None:intergenic 25.0%
!! GTTTTTCATCATTCTTTCTT+TGG + Chr7:84290042-84290061 MsG0780040920.01.T01:intron 25.0%
!! TAGTATATAAGGTCTTGTAT+TGG + Chr7:84288309-84288328 MsG0780040920.01.T01:intron 25.0%
!!! ATTTTGCCAAAAGTTTTAAG+GGG - Chr7:84288372-84288391 None:intergenic 25.0%
!!! CAAAATCACAAGTTTTTTTC+TGG + Chr7:84290365-84290384 MsG0780040920.01.T01:intron 25.0%
!!! CAATTTCACTTTACTTTTGA+TGG + Chr7:84291660-84291679 MsG0780040920.01.T01:CDS 25.0%
AAAAGGGAAACATTATACTG+AGG + Chr7:84288681-84288700 MsG0780040920.01.T01:CDS 30.0%
AAATCACTCAAACTCCTAAT+TGG + Chr7:84289228-84289247 MsG0780040920.01.T01:intron 30.0%
AAGCATCTCGAAGTATAAAA+GGG + Chr7:84288665-84288684 MsG0780040920.01.T01:CDS 30.0%
AATTAGGAGTTTGAGTGATT+TGG - Chr7:84289229-84289248 None:intergenic 30.0%
ACTTGTGTAATTGCTAATAC+AGG - Chr7:84289537-84289556 None:intergenic 30.0%
AGAAGTAATAAAGTTAGGAC+TGG - Chr7:84288533-84288552 None:intergenic 30.0%
ATATGTGGGCATATATATTC+AGG + Chr7:84289879-84289898 MsG0780040920.01.T01:intron 30.0%
ATTAGGAGTTTGAGTGATTT+GGG - Chr7:84289228-84289247 None:intergenic 30.0%
ATTGGATAGTGATATCATTC+AGG + Chr7:84289246-84289265 MsG0780040920.01.T01:intron 30.0%
CATAATGTACATCTTCATCT+TGG + Chr7:84290189-84290208 MsG0780040920.01.T01:CDS 30.0%
CTAACTTCAATAACGATAAG+GGG - Chr7:84288959-84288978 None:intergenic 30.0%
CTGAACAAGGAAAAGAAATA+AGG - Chr7:84291339-84291358 None:intergenic 30.0%
GAAAGTTAATGCCTAAGTAT+TGG + Chr7:84289559-84289578 MsG0780040920.01.T01:intron 30.0%
GAAGTAATAAAGTTAGGACT+GGG - Chr7:84288532-84288551 None:intergenic 30.0%
GAATGATGAAAAACTTGAGA+AGG - Chr7:84290036-84290055 None:intergenic 30.0%
GCTAACTTCAATAACGATAA+GGG - Chr7:84288960-84288979 None:intergenic 30.0%
GGAAGATGAAAACAATTTAG+AGG + Chr7:84289729-84289748 MsG0780040920.01.T01:intron 30.0%
GGAGTTATATAGGATTCATT+TGG + Chr7:84291469-84291488 MsG0780040920.01.T01:intron 30.0%
GGATAAGAATGTTGACAAAA+GGG + Chr7:84291248-84291267 MsG0780040920.01.T01:CDS 30.0%
TAAATGGTTGGAAAGAATGA+AGG - Chr7:84287176-84287195 None:intergenic 30.0%
TAATTCAGAATTGTCTGTTG+TGG + Chr7:84290774-84290793 MsG0780040920.01.T01:intron 30.0%
TACCAAACTTTCAAAAAGCA+CGG - Chr7:84288829-84288848 None:intergenic 30.0%
TGAATTGGTTGGATTTATTG+AGG + Chr7:84287490-84287509 MsG0780040920.01.T01:intron 30.0%
TGCTAACTTCAATAACGATA+AGG - Chr7:84288961-84288980 None:intergenic 30.0%
TTTAGTATGACCTGTTTGAA+TGG + Chr7:84287591-84287610 MsG0780040920.01.T01:intron 30.0%
! AAAGCATCTCGAAGTATAAA+AGG + Chr7:84288664-84288683 MsG0780040920.01.T01:CDS 30.0%
! ATATTCGTGAAGCATTAATG+AGG + Chr7:84291103-84291122 MsG0780040920.01.T01:CDS 30.0%
! ATCGCTACAAAGTGAAATTT+TGG + Chr7:84288221-84288240 MsG0780040920.01.T01:intron 30.0%
! CATAGTCTTACTACAAGAAT+AGG - Chr7:84286690-84286709 None:intergenic 30.0%
! CTTTTGTCAACATTCTTATC+CGG - Chr7:84291249-84291268 None:intergenic 30.0%
! GAACTGAAAAAAGCATACTT+TGG + Chr7:84289941-84289960 MsG0780040920.01.T01:CDS 30.0%
! GATATCTGATAAAGAGTATG+AGG + Chr7:84289676-84289695 MsG0780040920.01.T01:intron 30.0%
! TATTCGTGAAGCATTAATGA+GGG + Chr7:84291104-84291123 MsG0780040920.01.T01:CDS 30.0%
! TATTTCGTTGATAGGCATTA+TGG + Chr7:84288102-84288121 MsG0780040920.01.T01:intron 30.0%
! TTCCAAAGATTTTGTGAAGT+TGG - Chr7:84289424-84289443 None:intergenic 30.0%
! TTTTGTCAACATTCTTATCC+GGG - Chr7:84291248-84291267 None:intergenic 30.0%
!! AGTTTGTTAGCTAAGATAGT+AGG - Chr7:84287802-84287821 None:intergenic 30.0%
!! TGAATAAACTTGCTGTTAAG+AGG - Chr7:84288397-84288416 None:intergenic 30.0%
!! TTTCACTTTACTTTTGATGG+TGG + Chr7:84291663-84291682 MsG0780040920.01.T01:CDS 30.0%
!! TTTTCCGTTGTTTTATGCTA+TGG + Chr7:84287971-84287990 MsG0780040920.01.T01:intron 30.0%
!!! CTGGGAGTATTATTTTTTAG+TGG - Chr7:84288514-84288533 None:intergenic 30.0%
!!! TTGATCCAACTTTGTTTTGT+GGG + Chr7:84287281-84287300 MsG0780040920.01.T01:intron 30.0%
!!! TTTGATCCAACTTTGTTTTG+TGG + Chr7:84287280-84287299 MsG0780040920.01.T01:intron 30.0%
AACTATTGATGCTCTTGTTC+AGG + Chr7:84290292-84290311 MsG0780040920.01.T01:CDS 35.0%
AAGCACTAGCTCATTGTAAA+GGG - Chr7:84287733-84287752 None:intergenic 35.0%
AAGTGGCATCACATAATAGT+GGG + Chr7:84288064-84288083 MsG0780040920.01.T01:intron 35.0%
AATCTATTATGCGATACTCC+TGG + Chr7:84287822-84287841 MsG0780040920.01.T01:intron 35.0%
ACAAGAAACTTGCCTTACAA+TGG + Chr7:84291220-84291239 MsG0780040920.01.T01:CDS 35.0%
ACCAATGATTATATCACACG+TGG - Chr7:84286832-84286851 None:intergenic 35.0%
AGATCAGAACCAAAAAAGAC+TGG - Chr7:84288610-84288629 None:intergenic 35.0%
AGCCAACTTCACAAAATCTT+TGG + Chr7:84289419-84289438 MsG0780040920.01.T01:intron 35.0%
AGGGTTGAATAATGACAAGT+TGG - Chr7:84287133-84287152 None:intergenic 35.0%
ATACCTGAAGCAGAAACAAA+GGG - Chr7:84287152-84287171 None:intergenic 35.0%
ATATATGCCCACATATAAGC+AGG - Chr7:84289875-84289894 None:intergenic 35.0%
ATATTCAGGCATTACCAGAA+AGG + Chr7:84289893-84289912 MsG0780040920.01.T01:intron 35.0%
ATCATATGATGTCATTGTGG+AGG - Chr7:84287922-84287941 None:intergenic 35.0%
ATCTATTATGCGATACTCCT+GGG + Chr7:84287823-84287842 MsG0780040920.01.T01:intron 35.0%
ATTAATGCATTCCAGGAGAT+CGG - Chr7:84287950-84287969 None:intergenic 35.0%
CAAAACTAGCCAAAAAAGCA+TGG - Chr7:84291409-84291428 None:intergenic 35.0%
CAAATGAAACACAAGACACA+AGG - Chr7:84290338-84290357 None:intergenic 35.0%
CAAATTCGAAAAGCTTCAAG+GGG - Chr7:84290830-84290849 None:intergenic 35.0%
CATAAAATGAAAAGGGCAAG+TGG + Chr7:84288047-84288066 MsG0780040920.01.T01:intron 35.0%
CGGATAAGAATGTTGACAAA+AGG + Chr7:84291247-84291266 MsG0780040920.01.T01:CDS 35.0%
CTCGTTGTTAACTATGGATT+CGG + Chr7:84287052-84287071 MsG0780040920.01.T01:intron 35.0%
CTTGTAGTAAGACTATGTAG+AGG + Chr7:84286693-84286712 MsG0780040920.01.T01:intron 35.0%
GATGTACATTATGTGCAAGA+TGG - Chr7:84290182-84290201 None:intergenic 35.0%
GCAAATTCGAAAAGCTTCAA+GGG - Chr7:84290831-84290850 None:intergenic 35.0%
GCTCTCCCTAAGAAAATTTA+AGG - Chr7:84291761-84291780 None:intergenic 35.0%
GGAAAACATTAATGCATTCC+AGG - Chr7:84287957-84287976 None:intergenic 35.0%
GTGATGATTCAGTGTTAAAG+TGG + Chr7:84288570-84288589 MsG0780040920.01.T01:intron 35.0%
TAGTAGTTGTCTATAACTGC+AGG + Chr7:84291074-84291093 MsG0780040920.01.T01:intron 35.0%
TATACCTGAAGCAGAAACAA+AGG - Chr7:84287153-84287172 None:intergenic 35.0%
TCCACGTGTGATATAATCAT+TGG + Chr7:84286828-84286847 MsG0780040920.01.T01:intron 35.0%
TCCTGATTAAAGTCTGAACA+AGG - Chr7:84291352-84291371 None:intergenic 35.0%
TCCTTGTTCAGACTTTAATC+AGG + Chr7:84291348-84291367 MsG0780040920.01.T01:intron 35.0%
TGGTTTCTCGTTGTTAACTA+TGG + Chr7:84287046-84287065 MsG0780040920.01.T01:intron 35.0%
TGTTAGCTAAGATAGTAGGA+GGG - Chr7:84287798-84287817 None:intergenic 35.0%
TTAGGAGTTTGAGTGATTTG+GGG - Chr7:84289227-84289246 None:intergenic 35.0%
TTGTCTTGTGGAAATGATGT+TGG + Chr7:84289811-84289830 MsG0780040920.01.T01:intron 35.0%
TTGTTAGCTAAGATAGTAGG+AGG - Chr7:84287799-84287818 None:intergenic 35.0%
TTTAAAGATCAGCAAACGCA+AGG + Chr7:84291137-84291156 MsG0780040920.01.T01:CDS 35.0%
! ACCAAACTTTCAAAAAGCAC+GGG - Chr7:84288828-84288847 None:intergenic 35.0%
! CCTTTTCTGCAATTGAATGT+CGG - Chr7:84289338-84289357 None:intergenic 35.0%
! CTTTTCTGCAATTGAATGTC+GGG - Chr7:84289337-84289356 None:intergenic 35.0%
! GATATCATTCAGGTGCTTTT+TGG + Chr7:84289256-84289275 MsG0780040920.01.T01:intron 35.0%
!! AATGCCTAAGTATTGGGTTT+GGG + Chr7:84289566-84289585 MsG0780040920.01.T01:intron 35.0%
!! GATCTAAGTCTTGTTTGAGT+AGG + Chr7:84290414-84290433 MsG0780040920.01.T01:intron 35.0%
!! TAAGTCTTGTTTGAGTAGGA+TGG + Chr7:84290418-84290437 MsG0780040920.01.T01:intron 35.0%
!! TAATGCCTAAGTATTGGGTT+TGG + Chr7:84289565-84289584 MsG0780040920.01.T01:intron 35.0%
!! TTCTTTGGGTGTTGATGATT+CGG + Chr7:84290057-84290076 MsG0780040920.01.T01:intron 35.0%
!! TTTTAATGGACGCTTAACTG+CGG + Chr7:84291448-84291467 MsG0780040920.01.T01:intron 35.0%
!! TTTTTCAGTTCACTATGCTC+AGG - Chr7:84289932-84289951 None:intergenic 35.0%
!!! AGTCTTTTTTGGTTCTGATC+TGG + Chr7:84288609-84288628 MsG0780040920.01.T01:intron 35.0%
!!! CATGCTTTTTTGGCTAGTTT+TGG + Chr7:84291407-84291426 MsG0780040920.01.T01:intron 35.0%
!!! TATGATTTTTTCCGATCTCC+TGG + Chr7:84287936-84287955 MsG0780040920.01.T01:intron 35.0%
AAACAACTCAGCTGCATTTC+TGG - Chr7:84288641-84288660 None:intergenic 40.0%
AAGAAAACCAGACTCAGCAA+TGG - Chr7:84289704-84289723 None:intergenic 40.0%
AATGACAATGTTAACCGTGC+AGG - Chr7:84290937-84290956 None:intergenic 40.0%
ACATTATGTGCAAGATGGTC+AGG - Chr7:84290177-84290196 None:intergenic 40.0%
ACATTGGAAACTAGAGAGAG+AGG + Chr7:84287567-84287586 MsG0780040920.01.T01:intron 40.0%
ACGTGGCTAATTCTGATTAG+TGG + Chr7:84286755-84286774 MsG0780040920.01.T01:intron 40.0%
AGCACTAGCTCATTGTAAAG+GGG - Chr7:84287732-84287751 None:intergenic 40.0%
AGCATGTTGCATGAATTGGT+TGG + Chr7:84287479-84287498 MsG0780040920.01.T01:intron 40.0%
AGCTTCACTACAACTGTTCA+AGG - Chr7:84290256-84290275 None:intergenic 40.0%
AGGCTAAGCTTCTTAAAGTG+AGG + Chr7:84289648-84289667 MsG0780040920.01.T01:intron 40.0%
AGTATAGGATTTATGGGGGT+TGG - Chr7:84289123-84289142 None:intergenic 40.0%
ATCGACCCACAAAACAAAGT+TGG - Chr7:84287289-84287308 None:intergenic 40.0%
CAAGCACTAGCTCATTGTAA+AGG - Chr7:84287734-84287753 None:intergenic 40.0%
CAAGTGGCATCACATAATAG+TGG + Chr7:84288063-84288082 MsG0780040920.01.T01:intron 40.0%
CACTGAATCATCACATTCAC+AGG - Chr7:84288564-84288583 None:intergenic 40.0%
CAGCAAGTTTATTCAGTTCG+TGG + Chr7:84288402-84288421 MsG0780040920.01.T01:intron 40.0%
CATGTTTCATTTCATGCTCC+TGG + Chr7:84290859-84290878 MsG0780040920.01.T01:intron 40.0%
CATTATGTGCAAGATGGTCA+GGG - Chr7:84290176-84290195 None:intergenic 40.0%
CATTGGAAACTAGAGAGAGA+GGG + Chr7:84287568-84287587 MsG0780040920.01.T01:intron 40.0%
CCGACATTCAATTGCAGAAA+AGG + Chr7:84289335-84289354 MsG0780040920.01.T01:intron 40.0%
CGCAAATTCGAAAAGCTTCA+AGG - Chr7:84290832-84290851 None:intergenic 40.0%
CGCATTATCTTCAGCCTTTA+TGG - Chr7:84290097-84290116 None:intergenic 40.0%
CGTGGCTAATTCTGATTAGT+GGG + Chr7:84286756-84286775 MsG0780040920.01.T01:intron 40.0%
CTGATCATGATGTTGCTACA+AGG + Chr7:84289787-84289806 MsG0780040920.01.T01:intron 40.0%
GAGGAGCTACAAAAAGTTTC+TGG + Chr7:84289303-84289322 MsG0780040920.01.T01:intron 40.0%
GAGTATGCAAGATCGACTAA+TGG - Chr7:84288015-84288034 None:intergenic 40.0%
GCTGAAGATAATGCGAGTAA+GGG + Chr7:84290102-84290121 MsG0780040920.01.T01:CDS 40.0%
GCTTAACTGCGGAGTTATAT+AGG + Chr7:84291459-84291478 MsG0780040920.01.T01:intron 40.0%
GTAGATATGAGCAATCTGAG+AGG + Chr7:84289284-84289303 MsG0780040920.01.T01:intron 40.0%
GTAGTAAGACTATGTAGAGG+TGG + Chr7:84286696-84286715 MsG0780040920.01.T01:intron 40.0%
GTATAGGATTTATGGGGGTT+GGG - Chr7:84289122-84289141 None:intergenic 40.0%
TAAACTCTTGACGGAAGACT+GGG + Chr7:84290530-84290549 MsG0780040920.01.T01:CDS 40.0%
TGAACTAAGGGATAAGGAGT+TGG - Chr7:84289085-84289104 None:intergenic 40.0%
TGAAGCTCTTAAGATCGATG+AGG + Chr7:84290269-84290288 MsG0780040920.01.T01:CDS 40.0%
TTGCTACAAGGTTTGTCTTG+TGG + Chr7:84289799-84289818 MsG0780040920.01.T01:intron 40.0%
! AGAACCAAAAAAGACTGGTC+AGG - Chr7:84288605-84288624 None:intergenic 40.0%
! AGGTATGCTTCTGAAAGGTT+TGG - Chr7:84288742-84288761 None:intergenic 40.0%
! CAGGAGCATGAAATGAAACA+TGG - Chr7:84290861-84290880 None:intergenic 40.0%
! CCAAACTTTCAAAAAGCACG+GGG - Chr7:84288827-84288846 None:intergenic 40.0%
! CTGGTTTGAACTAAGGGATA+AGG - Chr7:84289091-84289110 None:intergenic 40.0%
! GAGCTTCCCCTTAAAACTTT+TGG + Chr7:84288363-84288382 MsG0780040920.01.T01:intron 40.0%
! TAGTGGGTATTATTCACACG+TGG + Chr7:84286772-84286791 MsG0780040920.01.T01:intron 40.0%
! TTGGTGTTCCTTGTTGTAGA+GGG + Chr7:84290500-84290519 MsG0780040920.01.T01:intron 40.0%
! TTTGAGTGATTTGGGGTGAT+GGG - Chr7:84289220-84289239 None:intergenic 40.0%
! TTTTCATCACTCTCAGCCTT+AGG + Chr7:84287320-84287339 MsG0780040920.01.T01:intron 40.0%
!! AGCTGAACTGGTTTGAACTA+AGG - Chr7:84289098-84289117 None:intergenic 40.0%
!! GCTGAACTGGTTTGAACTAA+GGG - Chr7:84289097-84289116 None:intergenic 40.0%
!! TTTAGAGGCATTGTGTTACG+TGG + Chr7:84289744-84289763 MsG0780040920.01.T01:intron 40.0%
!!! ATTAGTTTTCCTCCTTCGTC+CGG + Chr7:84289041-84289060 MsG0780040920.01.T01:intron 40.0%
!!! TGAGTCTGGTTTTCTTCTCA+AGG + Chr7:84289708-84289727 MsG0780040920.01.T01:intron 40.0%
AAACGCACAAGATACGACCA+AGG + Chr7:84291565-84291584 MsG0780040920.01.T01:CDS 45.0%
AACGCACAAGATACGACCAA+GGG + Chr7:84291566-84291585 MsG0780040920.01.T01:CDS 45.0%
AAGTTTCATCTTCCACCGTG+AGG - Chr7:84286667-84286686 None:intergenic 45.0%
ACAGCCCAAACCCAATACTT+AGG - Chr7:84289573-84289592 None:intergenic 45.0%
ACTAAGGGATAAGGAGTTGG+AGG - Chr7:84289082-84289101 None:intergenic 45.0%
AGCTGCTCAAAAATCTCCTC+AGG + Chr7:84290578-84290597 MsG0780040920.01.T01:CDS 45.0%
AGGACCTTGAAGAATCAGGA+TGG + Chr7:84291589-84291608 MsG0780040920.01.T01:CDS 45.0%
AGGTCCACAGTTCGAAACTT+GGG - Chr7:84286647-84286666 None:intergenic 45.0%
CAGTTCTTCGCAAGTTATGC+AGG + Chr7:84288773-84288792 MsG0780040920.01.T01:CDS 45.0%
CTAAACTCTTGACGGAAGAC+TGG + Chr7:84290529-84290548 MsG0780040920.01.T01:CDS 45.0%
GACACACAAGGAAATCATGC+AGG - Chr7:84287900-84287919 None:intergenic 45.0%
GACCTTGAAGAATCAGGATG+GGG + Chr7:84291591-84291610 MsG0780040920.01.T01:CDS 45.0%
GATACCCAAGTTTCGAACTG+TGG + Chr7:84286640-84286659 MsG0780040920.01.T01:CDS 45.0%
GATTTGCATCAAGCAAGACG+TGG + Chr7:84286738-84286757 MsG0780040920.01.T01:intron 45.0%
GGACCTTGAAGAATCAGGAT+GGG + Chr7:84291590-84291609 MsG0780040920.01.T01:CDS 45.0%
GGCTGAAGATAATGCGAGTA+AGG + Chr7:84290101-84290120 MsG0780040920.01.T01:intron 45.0%
GGGAGAAGCTAAACTCTTGA+CGG + Chr7:84290521-84290540 MsG0780040920.01.T01:CDS 45.0%
GGTGGAGGTTTCAATCCATT+CGG + Chr7:84291624-84291643 MsG0780040920.01.T01:CDS 45.0%
GTGCAGCATGTTGCATGAAT+TGG + Chr7:84287475-84287494 MsG0780040920.01.T01:intron 45.0%
GTTCACTATGCTCAGGATCT+AGG - Chr7:84289925-84289944 None:intergenic 45.0%
GTTGTTACCTTAGTGCATGC+TGG - Chr7:84289477-84289496 None:intergenic 45.0%
TGACAAAAGGGAAGAAGCAG+AGG + Chr7:84291260-84291279 MsG0780040920.01.T01:CDS 45.0%
TGAGTTCATCAGAGAGAGGA+TGG + Chr7:84288127-84288146 MsG0780040920.01.T01:intron 45.0%
TTCATCAGAGAGAGGATGGA+GGG + Chr7:84288131-84288150 MsG0780040920.01.T01:intron 45.0%
TTTCTCTCCAGCATGCACTA+AGG + Chr7:84289467-84289486 MsG0780040920.01.T01:intron 45.0%
! AAGGGGCAAAATGTTGCTTC+TGG - Chr7:84288942-84288961 None:intergenic 45.0%
! ACTTTCAAAAAGCACGGGGA+TGG - Chr7:84288823-84288842 None:intergenic 45.0%
! CTTTCAAAAAGCACGGGGAT+GGG - Chr7:84288822-84288841 None:intergenic 45.0%
! GAAGTTGGCTGACTCATAGA+GGG - Chr7:84289409-84289428 None:intergenic 45.0%
! GGGAAAGGTATGCTTCTGAA+AGG - Chr7:84288747-84288766 None:intergenic 45.0%
! GGGTCGTTGCATTGTGTTTT+AGG + Chr7:84291525-84291544 MsG0780040920.01.T01:intron 45.0%
! GGTTTGAGTTCATCAGAGAG+AGG + Chr7:84288123-84288142 MsG0780040920.01.T01:intron 45.0%
! GTCTGAAACAATCCCCTGTA+AGG - Chr7:84287080-84287099 None:intergenic 45.0%
! GTTTGAGTGATTTGGGGTGA+TGG - Chr7:84289221-84289240 None:intergenic 45.0%
! TCTTGTATTGGCGTTGAAGC+TGG + Chr7:84288321-84288340 MsG0780040920.01.T01:intron 45.0%
! TGAAGTTGGCTGACTCATAG+AGG - Chr7:84289410-84289429 None:intergenic 45.0%
! TGGTGTTCCTTGTTGTAGAG+GGG + Chr7:84290501-84290520 MsG0780040920.01.T01:intron 45.0%
! TGTAAAGTGCTAGTCAGGCT+TGG + Chr7:84290216-84290235 MsG0780040920.01.T01:CDS 45.0%
! TTCAGAAGCATACCTTTCCC+AGG + Chr7:84288747-84288766 MsG0780040920.01.T01:CDS 45.0%
! TTGAGTGATTTGGGGTGATG+GGG - Chr7:84289219-84289238 None:intergenic 45.0%
! TTTCAAAAAGCACGGGGATG+GGG - Chr7:84288821-84288840 None:intergenic 45.0%
!! CAACCCTTTGTTTCTGCTTC+AGG + Chr7:84287146-84287165 MsG0780040920.01.T01:intron 45.0%
!! CCCCGTGCTTTTTGAAAGTT+TGG + Chr7:84288824-84288843 MsG0780040920.01.T01:intron 45.0%
!! CTTGGTGTTCCTTGTTGTAG+AGG + Chr7:84290499-84290518 MsG0780040920.01.T01:intron 45.0%
!! TATGGATTCGGTGCCTTACA+GGG + Chr7:84287064-84287083 MsG0780040920.01.T01:intron 45.0%
!! TTAGTTTTCCTCCTTCGTCC+GGG + Chr7:84289042-84289061 MsG0780040920.01.T01:intron 45.0%
!!! GTTGCCTGACCAGTCTTTTT+TGG + Chr7:84288598-84288617 MsG0780040920.01.T01:intron 45.0%
!! AAAATACAAAAAAAAATAAA+TGG - Chr7:84287192-84287211 None:intergenic 5.0%
!!! AAATAATTTGTTTTTTTTAA+TGG + Chr7:84291434-84291453 MsG0780040920.01.T01:intron 5.0%
ACTTGCCTTACAATGGCACC+CGG + Chr7:84291227-84291246 MsG0780040920.01.T01:CDS 50.0%
ACTTGCGAAGAACTGAAGCC+TGG - Chr7:84288768-84288787 None:intergenic 50.0%
AGAAATCGCTGCTGCATACG+AGG + Chr7:84291293-84291312 MsG0780040920.01.T01:CDS 50.0%
AGCTTCTCCCCTCTACAACA+AGG - Chr7:84290511-84290530 None:intergenic 50.0%
AGGGAGGACCTTGAAGAATC+AGG + Chr7:84291585-84291604 MsG0780040920.01.T01:CDS 50.0%
ATGCGAGTAAGGGCAAGCTA+CGG + Chr7:84290112-84290131 MsG0780040920.01.T01:CDS 50.0%
CACCCCATCCTGATTCTTCA+AGG - Chr7:84291596-84291615 None:intergenic 50.0%
CATAGAGGGACTGAGCTGTT+TGG - Chr7:84289395-84289414 None:intergenic 50.0%
CGTATGCAGCAGCGATTTCT+CGG - Chr7:84291293-84291312 None:intergenic 50.0%
CGTGTGATGACATGTCAACG+TGG + Chr7:84286860-84286879 MsG0780040920.01.T01:intron 50.0%
CTTCGCAAGTTATGCAGGTG+TGG + Chr7:84288778-84288797 MsG0780040920.01.T01:intron 50.0%
CTTGAAGAATCAGGATGGGG+TGG + Chr7:84291594-84291613 MsG0780040920.01.T01:CDS 50.0%
CTTGCGAAGAACTGAAGCCT+GGG - Chr7:84288767-84288786 None:intergenic 50.0%
GAAGAACTGAAGCCTGGGAA+AGG - Chr7:84288762-84288781 None:intergenic 50.0%
GAGGTCCACAGTTCGAAACT+TGG - Chr7:84286648-84286667 None:intergenic 50.0%
GATAAGGAGTTGGAGGTCCT+GGG - Chr7:84289075-84289094 None:intergenic 50.0%
GATCTAGGCGAAGACCTTTC+TGG - Chr7:84289910-84289929 None:intergenic 50.0%
GATTCTTCAAGGTCCTCCCT+TGG - Chr7:84291585-84291604 None:intergenic 50.0%
GCCTGACTAGCACTTTACAC+AGG - Chr7:84290215-84290234 None:intergenic 50.0%
GGAGGTTTCAATCCATTCGG+TGG + Chr7:84291627-84291646 MsG0780040920.01.T01:CDS 50.0%
GTCATTGTGGAGGACACACA+AGG - Chr7:84287912-84287931 None:intergenic 50.0%
GTTCATCAGAGAGAGGATGG+AGG + Chr7:84288130-84288149 MsG0780040920.01.T01:intron 50.0%
GTTTCGAACTGTGGACCTCA+CGG + Chr7:84286649-84286668 MsG0780040920.01.T01:CDS 50.0%
TCATCAGAGAGAGGATGGAG+GGG + Chr7:84288132-84288151 MsG0780040920.01.T01:intron 50.0%
! ATGAGAAGTGTGAGGGAAGG+AGG - Chr7:84289190-84289209 None:intergenic 50.0%
! GAGATGAGAAGTGTGAGGGA+AGG - Chr7:84289193-84289212 None:intergenic 50.0%
! GCCTGTGTAAAGTGCTAGTC+AGG + Chr7:84290211-84290230 MsG0780040920.01.T01:CDS 50.0%
! GGAGGAGATGAGAAGTGTGA+GGG - Chr7:84289197-84289216 None:intergenic 50.0%
! GGTTTCAATCCATTCGGTGG+TGG + Chr7:84291630-84291649 MsG0780040920.01.T01:CDS 50.0%
! TGAGAAGTGTGAGGGAAGGA+GGG - Chr7:84289189-84289208 None:intergenic 50.0%
! TGAGTGATTTGGGGTGATGG+GGG - Chr7:84289218-84289237 None:intergenic 50.0%
! TGCGCGTTTTATCTCAGCAG+CGG - Chr7:84291199-84291218 None:intergenic 50.0%
! TTCAATCCATTCGGTGGTGG+TGG + Chr7:84291633-84291652 MsG0780040920.01.T01:CDS 50.0%
!! ATGGATTCGGTGCCTTACAG+GGG + Chr7:84287065-84287084 MsG0780040920.01.T01:intron 50.0%
!! CTATGGATTCGGTGCCTTAC+AGG + Chr7:84287063-84287082 MsG0780040920.01.T01:intron 50.0%
!! CTTATCCGGGTGCCATTGTA+AGG - Chr7:84291235-84291254 None:intergenic 50.0%
!!! ACTTTTGATGGTGGCTTCCC+TGG + Chr7:84291672-84291691 MsG0780040920.01.T01:CDS 50.0%
ACTCTTGACGGAAGACTGGG+AGG + Chr7:84290533-84290552 MsG0780040920.01.T01:CDS 55.0%
CACGGGGATGGGGTAATACT+TGG - Chr7:84288811-84288830 None:intergenic 55.0%
CTCTTGACGGAAGACTGGGA+GGG + Chr7:84290534-84290553 MsG0780040920.01.T01:CDS 55.0%
GAAGAATCAGGATGGGGTGG+CGG + Chr7:84291597-84291616 MsG0780040920.01.T01:CDS 55.0%
GAGGTCCTGGGTTCAAAACC+CGG - Chr7:84289063-84289082 None:intergenic 55.0%
GCACAAGATACGACCAAGGG+AGG + Chr7:84291569-84291588 MsG0780040920.01.T01:CDS 55.0%
GGAGCTCTCTCAGCTATTGC+AGG + Chr7:84289356-84289375 MsG0780040920.01.T01:intron 55.0%
GGATAAGGAGTTGGAGGTCC+TGG - Chr7:84289076-84289095 None:intergenic 55.0%
GGTGGCAGTGGAGGAATTCA+AGG + Chr7:84290134-84290153 MsG0780040920.01.T01:CDS 55.0%
GTTCAAAACCCGGACGAAGG+AGG - Chr7:84289053-84289072 None:intergenic 55.0%
TGCGAGTAAGGGCAAGCTAC+GGG + Chr7:84290113-84290132 MsG0780040920.01.T01:CDS 55.0%
TGGGTTCAAAACCCGGACGA+AGG - Chr7:84289056-84289075 None:intergenic 55.0%
! AGAAGTGTGAGGGAAGGAGG+GGG - Chr7:84289187-84289206 None:intergenic 55.0%
! GAGAAGTGTGAGGGAAGGAG+GGG - Chr7:84289188-84289207 None:intergenic 55.0%
! GGGAGGAGATGAGAAGTGTG+AGG - Chr7:84289198-84289217 None:intergenic 55.0%
!! TGAGGTGCCATTGCTGAGTC+TGG + Chr7:84289694-84289713 MsG0780040920.01.T01:intron 55.0%
!!! TTCGTCCGGGTTTTGAACCC+AGG + Chr7:84289055-84289074 MsG0780040920.01.T01:intron 55.0%
GAGTAAGGGCAAGCTACGGG+TGG + Chr7:84290116-84290135 MsG0780040920.01.T01:CDS 60.0%
GTGCTAGTCAGGCTTGGCAG+AGG + Chr7:84290222-84290241 MsG0780040920.01.T01:CDS 60.0%
TCGAACTGTGGACCTCACGG+TGG + Chr7:84286652-84286671 MsG0780040920.01.T01:CDS 60.0%
TGCTGTCCACCACCACCGAA+TGG - Chr7:84291642-84291661 None:intergenic 60.0%
TGGGGGTTGGGTAGCTGAAC+TGG - Chr7:84289110-84289129 None:intergenic 60.0%
!! GTGATTTGGGGTGATGGGGG+AGG - Chr7:84289215-84289234 None:intergenic 60.0%
!! TGATGGTGGCTTCCCTGGTG+AGG + Chr7:84291677-84291696 MsG0780040920.01.T01:intron 60.0%
CAAGCTACGGGTGGCAGTGG+AGG + Chr7:84290125-84290144 MsG0780040920.01.T01:CDS 65.0%
CTGGTGAGGCTTTCCCGTGG+CGG + Chr7:84291691-84291710 MsG0780040920.01.T01:intron 65.0%
GAGGGAAGGAGGGGGATGAG+TGG - Chr7:84289179-84289198 None:intergenic 65.0%
GAGGGGGATGAGTGGCGCAA+TGG - Chr7:84289171-84289190 None:intergenic 65.0%
GCCACGGGAAAGCCTCACCA+GGG - Chr7:84291692-84291711 None:intergenic 65.0%
GTGGTCACGAGTCACGACCC+AGG - Chr7:84287843-84287862 None:intergenic 65.0%
TCCCTGGTGAGGCTTTCCCG+TGG + Chr7:84291688-84291707 MsG0780040920.01.T01:intron 65.0%
! GAATCAGGATGGGGTGGCGG+CGG + Chr7:84291600-84291619 MsG0780040920.01.T01:CDS 65.0%
CGCCACGGGAAAGCCTCACC+AGG - Chr7:84291693-84291712 None:intergenic 70.0%
GGGCAAGCTACGGGTGGCAG+TGG + Chr7:84290122-84290141 MsG0780040920.01.T01:CDS 70.0%
GTGAGGCTTTCCCGTGGCGG+CGG + Chr7:84291694-84291713 MsG0780040920.01.T01:intron 70.0%
AGGCTTTCCCGTGGCGGCGG+CGG + Chr7:84291697-84291716 MsG0780040920.01.T01:intron 75.0%
CGTAACCACCGCCGCCGCCA+CGG - Chr7:84291708-84291727 None:intergenic 75.0%
GTAACCACCGCCGCCGCCAC+GGG - Chr7:84291707-84291726 None:intergenic 75.0%
! TCAGGATGGGGTGGCGGCGG+CGG + Chr7:84291603-84291622 MsG0780040920.01.T01:CDS 75.0%
! CTTTCCCGTGGCGGCGGCGG+TGG + Chr7:84291700-84291719 MsG0780040920.01.T01:intron 80.0%
!! GGATGGGGTGGCGGCGGCGG+TGG + Chr7:84291606-84291625 MsG0780040920.01.T01:CDS 85.0%
!! TGGGGTGGCGGCGGCGGTGG+AGG + Chr7:84291609-84291628 MsG0780040920.01.T01:CDS 85.0%
Chromosome Type Strat End Strand Name
Chr7 gene 84286620 84291785 84286620 ID=MsG0780040920.01;Name=MsG0780040920.01
Chr7 mRNA 84286620 84291785 84286620 ID=MsG0780040920.01.T01;Parent=MsG0780040920.01;Name=MsG0780040920.01.T01;_AED=0.37;_eAED=0.41;_QI=0|0|0|0.87|1|1|8|0|356
Chr7 exon 84286620 84286698 84286620 ID=MsG0780040920.01.T01:exon:40688;Parent=MsG0780040920.01.T01
Chr7 exon 84288611 84288794 84288611 ID=MsG0780040920.01.T01:exon:40689;Parent=MsG0780040920.01.T01
Chr7 exon 84289901 84289994 84289901 ID=MsG0780040920.01.T01:exon:40690;Parent=MsG0780040920.01.T01
Chr7 exon 84290102 84290356 84290102 ID=MsG0780040920.01.T01:exon:40691;Parent=MsG0780040920.01.T01
Chr7 exon 84290519 84290599 84290519 ID=MsG0780040920.01.T01:exon:40692;Parent=MsG0780040920.01.T01
Chr7 exon 84291096 84291314 84291096 ID=MsG0780040920.01.T01:exon:40693;Parent=MsG0780040920.01.T01
Chr7 exon 84291547 84291693 84291547 ID=MsG0780040920.01.T01:exon:40694;Parent=MsG0780040920.01.T01
Chr7 exon 84291774 84291785 84291774 ID=MsG0780040920.01.T01:exon:40695;Parent=MsG0780040920.01.T01
Chr7 CDS 84286620 84286698 84286620 ID=MsG0780040920.01.T01:cds;Parent=MsG0780040920.01.T01
Chr7 CDS 84288611 84288794 84288611 ID=MsG0780040920.01.T01:cds;Parent=MsG0780040920.01.T01
Chr7 CDS 84289901 84289994 84289901 ID=MsG0780040920.01.T01:cds;Parent=MsG0780040920.01.T01
Chr7 CDS 84290102 84290356 84290102 ID=MsG0780040920.01.T01:cds;Parent=MsG0780040920.01.T01
Chr7 CDS 84290519 84290599 84290519 ID=MsG0780040920.01.T01:cds;Parent=MsG0780040920.01.T01
Chr7 CDS 84291096 84291314 84291096 ID=MsG0780040920.01.T01:cds;Parent=MsG0780040920.01.T01
Chr7 CDS 84291547 84291693 84291547 ID=MsG0780040920.01.T01:cds;Parent=MsG0780040920.01.T01
Chr7 CDS 84291774 84291785 84291774 ID=MsG0780040920.01.T01:cds;Parent=MsG0780040920.01.T01
Gene Sequence

>MsG0780040920.01.T01

ATGATTCTAATTGAAAATGGGATACCCAAGTTTCGAACTGTGGACCTCACGGTGGAAGATGAAACTTCCTATTCTTGTATCTTTTTTGGTTCTGATCTGGTGAAAACCAGAAATGCAGCTGAGTTGTTTGAGAAAGCATCTCGAAGTATAAAAGGGAAACATTATACTGAGGCACTTAATGATCTAAATGCTGCAATAGAAGAAGATCCAAACCTTTCAGAAGCATACCTTTCCCAGGCTTCAGTTCTTCGCAAGTTATGCAGGCATTACCAGAAAGGTCTTCGCCTAGATCCTGAGCATAGTGAACTGAAAAAAGCATACTTTGGACTGAAAAATCTACTCAAAAAGAGTAAAAGTGCTGAAGATAATGCGAGTAAGGGCAAGCTACGGGTGGCAGTGGAGGAATTCAAGGCTGCACTTGCTGTCGACCCTGACCATCTTGCACATAATGTACATCTTCATCTTGGCCTGTGTAAAGTGCTAGTCAGGCTTGGCAGAGGAAAAGACGCCTTGAACAGTTGTAGTGAAGCTCTTAAGATCGATGAGGAACTATTGATGCTCTTGTTCAGGTTCACTATAATTTTGAACATCCTTGTGTCTTGTGTTTCATTTAGGGGAGAAGCTAAACTCTTGACGGAAGACTGGGAGGGAGCTGTTGAAGATCTGAAATCAGCTGCTCAAAAATCTCCTCAGGATATGAATATTCGTGAAGCATTAATGAGGGCTGAAAAAGCTTTAAAGATCAGCAAACGCAAGGATTATTACAAGATTTTGGAAATTTCAAAACATGCTTCCGCTGCTGAGATAAAACGCGCATACAAGAAACTTGCCTTACAATGGCACCCGGATAAGAATGTTGACAAAAGGGAAGAAGCAGAGGCTAAATTCCGAGAAATCGCTGCTGCATACGAGGTTCTAAGTGATGAAGACAAACGCACAAGATACGACCAAGGGAGGACCTTGAAGAATCAGGATGGGGTGGCGGCGGCGGTGGAGGTTTCAATCCATTCGGTGGTGGTGGACAGCAATTTCACTTTACTTTTGATGGTGGCTTCCCTGGGAGAGCTATAG
Protein sequence

>MsG0780040920.01.T01

MILIENGIPKFRTVDLTVEDETSYSCIFFGSDLVKTRNAAELFEKASRSIKGKHYTEALNDLNAAIEEDPNLSEAYLSQASVLRKLCRHYQKGLRLDPEHSELKKAYFGLKNLLKKSKSAEDNASKGKLRVAVEEFKAALAVDPDHLAHNVHLHLGLCKVLVRLGRGKDALNSCSEALKIDEELLMLLFRFTIILNILVSCVSFRGEAKLLTEDWEGAVEDLKSAAQKSPQDMNIREALMRAEKALKISKRKDYYKILEISKHASAAEIKRAYKKLALQWHPDKNVDKREEAEAKFREIAAAYEVLSDEDKRTRYDQGRTLKNQDGVAAAVEVSIHSVVVDSNFTLLLMVASLGEL*