AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041351.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041351.01.T01 MTR_7g109340 97.248 327 9 0 82 408 18 344 0.0 634
MsG0780041351.01.T01 MTR_8g006430 38.068 352 179 10 91 407 15 362 1.12e-54 187
MsG0780041351.01.T01 MTR_4g078850 35.756 344 191 7 91 408 5 344 1.65e-52 179
MsG0780041351.01.T01 MTR_4g015840 37.318 343 180 8 91 407 5 338 2.79e-52 178
MsG0780041351.01.T01 MTR_3g108020 34.251 327 201 7 91 408 5 326 3.78e-52 177
MsG0780041351.01.T01 MTR_2g014470 34.513 339 197 8 91 408 5 339 8.16e-49 169
MsG0780041351.01.T01 MTR_2g090705 34.503 342 189 9 91 408 5 335 1.13e-47 166
MsG0780041351.01.T01 MTR_4g050420 36.311 347 187 7 91 407 14 356 5.84e-42 153
MsG0780041351.01.T01 MTR_2g087660 34.463 354 186 9 91 407 14 358 7.17e-42 152
MsG0780041351.01.T01 MTR_1g087580 58.594 128 45 2 286 407 58 183 2.61e-38 137
MsG0780041351.01.T01 MTR_3g087030 30.896 424 243 17 29 406 6 425 1.21e-35 136
MsG0780041351.01.T01 MTR_2g014480 30.294 340 205 7 91 402 5 340 1.69e-35 134
MsG0780041351.01.T01 MTR_2g087660 34.839 310 155 8 91 366 14 310 2.63e-34 130
MsG0780041351.01.T01 MTR_5g037880 30.275 327 160 9 91 407 6 274 4.06e-32 123
MsG0780041351.01.T01 MTR_4g023470 30.791 354 189 11 89 403 85 421 1.12e-31 125
MsG0780041351.01.T01 MTR_3g027580 28.869 336 218 6 89 404 88 422 5.49e-30 120
MsG0780041351.01.T01 MTR_2g104030 27.809 356 201 10 91 400 71 416 1.23e-29 120
MsG0780041351.01.T01 MTR_5g065160 26.056 426 280 11 2 401 1 417 3.08e-28 116
MsG0780041351.01.T01 MTR_5g065160 25.850 441 262 11 2 401 1 417 3.17e-28 115
MsG0780041351.01.T01 MTR_5g065160 27.811 338 217 8 89 401 75 410 1.06e-27 114
MsG0780041351.01.T01 MTR_5g065160 27.479 353 199 8 89 401 81 416 1.08e-27 114
MsG0780041351.01.T01 MTR_4g015840 31.174 247 133 4 162 407 51 261 1.39e-24 102
MsG0780041351.01.T01 MTR_3g437850 35.366 164 81 4 91 229 3 166 1.65e-19 85.5
MsG0780041351.01.T01 MTR_6g471050 27.463 335 189 13 116 406 7 331 3.98e-19 89.4
MsG0780041351.01.T01 MTR_1g110310 55.405 74 33 0 86 159 12 85 1.45e-17 84.3
MsG0780041351.01.T01 MTR_7g101070 62.687 67 24 1 88 153 356 422 5.32e-17 83.2
MsG0780041351.01.T01 MTR_3g437840 32.374 139 93 1 270 407 23 161 1.74e-15 73.9
MsG0780041351.01.T01 MTR_3g437360 54.930 71 31 1 91 160 6 76 2.51e-15 77.0
MsG0780041351.01.T01 MTR_1g052110 44.086 93 48 2 90 182 38 126 3.88e-15 75.9
MsG0780041351.01.T01 MTR_1g029460 36.364 121 70 1 91 211 7 120 4.75e-15 76.6
MsG0780041351.01.T01 MTR_8g037810 42.857 105 53 1 85 189 1 98 4.85e-15 76.3
MsG0780041351.01.T01 MTR_7g092380 51.471 68 33 0 88 155 20 87 5.59e-15 75.1
MsG0780041351.01.T01 MTR_3g088140 31.351 185 119 5 226 407 174 353 8.36e-15 75.5
MsG0780041351.01.T01 MTR_4g023490 27.654 358 209 13 89 407 15 361 8.51e-15 75.9
MsG0780041351.01.T01 MTR_7g069480 54.545 66 29 1 92 157 29 93 2.12e-14 75.5
MsG0780041351.01.T01 MTR_1g105540 41.111 90 47 3 68 152 8 96 1.48e-13 71.2
MsG0780041351.01.T01 MTR_5g004570 35.000 120 71 1 85 204 1 113 1.67e-13 70.5
MsG0780041351.01.T01 MTR_5g035770 46.575 73 39 0 88 160 23 95 2.93e-13 71.2
MsG0780041351.01.T01 MTR_5g012530 45.783 83 42 2 89 168 11 93 3.15e-13 71.6
MsG0780041351.01.T01 MTR_7g112360 48.485 66 30 2 91 152 17 82 3.85e-13 66.2
MsG0780041351.01.T01 MTR_5g065860 50.000 64 32 0 89 152 47 110 5.00e-13 66.6
MsG0780041351.01.T01 MTR_7g112360 48.485 66 30 2 91 152 17 82 2.42e-12 65.1
MsG0780041351.01.T01 MTR_1g029470 34.646 127 76 1 85 211 1 120 5.36e-12 67.4
MsG0780041351.01.T01 MTR_8g022310 50.000 68 28 2 91 152 11 78 6.37e-12 65.1
MsG0780041351.01.T01 MTR_8g081620 34.328 134 78 5 39 168 11 138 8.80e-12 64.3
MsG0780041351.01.T01 MTR_8g022310 50.000 68 28 2 91 152 11 78 9.90e-12 64.3
MsG0780041351.01.T01 MTR_8g022310 50.000 68 28 2 91 152 11 78 1.18e-11 64.3
MsG0780041351.01.T01 MTR_8g022310 50.000 68 28 2 91 152 11 78 1.54e-11 64.3
MsG0780041351.01.T01 MTR_2g006890 28.873 142 99 2 268 407 234 375 6.71e-11 63.9
MsG0780041351.01.T01 MTR_2g044580 45.070 71 37 2 92 161 101 170 7.92e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041351.01.T01 AT3G62600 77.616 344 72 3 69 408 4 346 0.0 544
MsG0780041351.01.T01 AT2G20560 35.088 342 189 7 91 408 5 337 5.60e-55 185
MsG0780041351.01.T01 AT3G08910 36.826 334 176 8 91 407 5 320 7.28e-55 184
MsG0780041351.01.T01 AT5G01390 34.897 341 186 8 91 407 5 333 1.47e-54 184
MsG0780041351.01.T01 AT5G25530 35.398 339 193 9 91 408 5 338 1.38e-52 179
MsG0780041351.01.T01 AT5G25530 34.582 347 193 10 91 408 5 346 8.13e-50 172
MsG0780041351.01.T01 AT5G22060 37.322 351 180 11 91 407 15 359 7.78e-48 169
MsG0780041351.01.T01 AT1G10350 33.046 348 198 6 91 408 5 347 2.04e-47 166
MsG0780041351.01.T01 AT1G59725 34.412 340 186 10 91 408 5 329 2.09e-47 165
MsG0780041351.01.T01 AT4G28480 33.125 320 178 6 91 408 5 290 2.26e-44 156
MsG0780041351.01.T01 AT5G01390 33.033 333 145 7 91 407 5 275 3.05e-42 150
MsG0780041351.01.T01 AT3G44110 34.770 348 192 8 91 407 15 358 3.83e-42 153
MsG0780041351.01.T01 AT5G48030 31.195 343 202 6 89 400 93 432 5.83e-36 137
MsG0780041351.01.T01 AT3G47940 31.389 360 188 11 91 408 5 347 1.53e-35 134
MsG0780041351.01.T01 AT3G44110 33.438 320 169 8 91 375 15 325 4.98e-35 132
MsG0780041351.01.T01 AT2G22360 33.718 347 194 13 91 406 87 428 9.41e-35 134
MsG0780041351.01.T01 AT4G39960 30.595 353 204 11 91 406 86 434 3.45e-31 124
MsG0780041351.01.T01 AT4G39960 30.595 353 204 11 91 406 86 434 3.45e-31 124
MsG0780041351.01.T01 AT1G80030 29.714 350 202 12 91 400 76 421 1.29e-28 117
MsG0780041351.01.T01 AT1G80030 29.714 350 202 12 91 400 76 421 1.63e-28 117
MsG0780041351.01.T01 AT1G80030 29.714 350 202 12 91 400 76 421 1.63e-28 117
MsG0780041351.01.T01 AT1G80030 29.714 350 202 12 91 400 76 421 1.63e-28 117
MsG0780041351.01.T01 AT5G01390 34.848 198 96 6 91 265 5 192 4.84e-26 105
MsG0780041351.01.T01 AT5G01390 48.148 108 41 2 91 183 5 112 5.91e-25 102
MsG0780041351.01.T01 AT1G28210 26.801 347 205 11 89 401 47 378 8.88e-23 100
MsG0780041351.01.T01 AT1G28210 26.801 347 205 11 89 401 47 378 9.14e-23 99.8
MsG0780041351.01.T01 AT1G28210 26.801 347 205 11 89 401 47 378 9.51e-23 99.8
MsG0780041351.01.T01 AT2G20550 32.787 183 118 3 227 408 106 284 2.71e-22 96.3
MsG0780041351.01.T01 AT2G20550 32.787 183 118 3 227 408 106 284 2.71e-22 96.3
MsG0780041351.01.T01 AT4G28480 31.148 183 121 3 227 408 170 348 3.22e-19 88.6
MsG0780041351.01.T01 AT3G17830 26.891 357 205 12 91 400 64 411 3.62e-19 89.7
MsG0780041351.01.T01 AT1G44160 29.524 210 113 4 211 407 166 353 4.92e-19 88.2
MsG0780041351.01.T01 AT2G21510 43.810 105 52 1 85 189 1 98 7.49e-18 84.3
MsG0780041351.01.T01 AT2G21510 43.810 105 52 1 85 189 1 98 8.09e-18 84.7
MsG0780041351.01.T01 AT2G21510 43.810 105 52 1 85 189 1 98 8.09e-18 84.7
MsG0780041351.01.T01 AT2G21510 43.810 105 52 1 85 189 1 98 1.07e-17 84.3
MsG0780041351.01.T01 AT2G21510 43.810 105 52 1 85 189 1 98 1.07e-17 84.3
MsG0780041351.01.T01 AT4G39150 51.899 79 38 0 85 163 1 79 5.82e-17 82.0
MsG0780041351.01.T01 AT4G39150 51.899 79 38 0 85 163 1 79 5.82e-17 82.0
MsG0780041351.01.T01 AT4G39150 51.899 79 38 0 85 163 1 79 5.82e-17 82.0
MsG0780041351.01.T01 AT1G68370 48.387 93 39 2 88 179 15 99 1.03e-16 82.0
MsG0780041351.01.T01 AT1G59980 47.222 72 38 0 88 159 21 92 4.94e-16 79.3
MsG0780041351.01.T01 AT1G59980 47.222 72 38 0 88 159 21 92 1.01e-15 79.0
MsG0780041351.01.T01 AT5G03160 56.716 67 28 1 88 153 368 434 1.49e-15 78.6
MsG0780041351.01.T01 AT1G56300 52.174 69 29 2 88 152 11 79 6.51e-15 71.2
MsG0780041351.01.T01 AT3G08970 57.576 66 27 1 92 157 29 93 7.60e-15 76.6
MsG0780041351.01.T01 AT3G08970 57.576 66 27 1 92 157 29 93 7.60e-15 76.6
MsG0780041351.01.T01 AT5G05750 39.474 114 55 4 85 187 109 219 2.13e-14 73.9
MsG0780041351.01.T01 AT1G56300 52.174 69 29 2 88 152 11 79 9.76e-14 68.9
MsG0780041351.01.T01 AT5G16650 52.239 67 32 0 89 155 10 76 1.20e-13 68.9
MsG0780041351.01.T01 AT5G16650 53.125 64 30 0 89 152 10 73 1.58e-13 67.8
MsG0780041351.01.T01 AT1G79940 50.769 65 30 2 92 155 101 164 6.41e-13 70.9
MsG0780041351.01.T01 AT2G33735 41.892 74 43 0 89 162 21 94 6.58e-13 65.5
MsG0780041351.01.T01 AT2G33735 41.892 74 43 0 89 162 21 94 6.58e-13 65.5
MsG0780041351.01.T01 AT4G21180 52.308 65 29 2 92 155 101 164 6.81e-13 70.9
MsG0780041351.01.T01 AT1G79940 50.769 65 30 2 92 155 101 164 6.84e-13 70.9
MsG0780041351.01.T01 AT1G79940 50.769 65 30 2 92 155 101 164 6.84e-13 70.9
MsG0780041351.01.T01 AT1G79940 50.769 65 30 2 92 155 101 164 6.84e-13 70.9
MsG0780041351.01.T01 AT4G21180 52.308 65 29 2 92 155 21 84 7.88e-13 70.5
MsG0780041351.01.T01 AT1G24120 43.421 76 43 0 88 163 18 93 1.11e-12 69.7
MsG0780041351.01.T01 AT2G35720 50.000 74 34 2 89 159 14 87 1.47e-12 69.7
MsG0780041351.01.T01 AT3G57340 40.816 98 49 3 88 179 111 205 2.22e-12 68.6
MsG0780041351.01.T01 AT3G57340 40.816 98 49 3 88 179 111 205 2.22e-12 68.6
MsG0780041351.01.T01 AT1G71000 49.275 69 31 2 88 152 6 74 2.24e-12 65.5
MsG0780041351.01.T01 AT1G71000 48.571 70 32 2 87 152 5 74 3.49e-12 64.7
MsG0780041351.01.T01 AT1G76700 41.772 79 46 0 85 163 1 79 5.97e-12 67.4
MsG0780041351.01.T01 AT5G06910 45.455 66 36 0 90 155 29 94 1.03e-11 65.5
MsG0780041351.01.T01 AT1G11040 33.824 136 89 1 273 407 297 432 1.14e-11 66.6
MsG0780041351.01.T01 AT4G13830 43.939 66 35 1 90 153 66 131 1.38e-11 63.5
MsG0780041351.01.T01 AT4G13830 43.939 66 35 1 90 153 66 131 1.58e-11 62.8
MsG0780041351.01.T01 AT3G12170 34.906 106 61 2 89 192 46 145 1.58e-11 65.1
MsG0780041351.01.T01 AT3G12170 44.776 67 37 0 89 155 10 76 1.76e-11 64.7
MsG0780041351.01.T01 AT1G21080 35.238 105 60 1 85 189 1 97 2.40e-11 65.5
MsG0780041351.01.T01 AT1G21080 35.238 105 60 1 85 189 1 97 3.18e-11 65.1
MsG0780041351.01.T01 AT5G59610 42.574 101 49 4 87 185 70 163 3.43e-11 63.5
MsG0780041351.01.T01 AT4G13830 43.939 66 35 1 90 153 66 131 5.91e-11 62.0
MsG0780041351.01.T01 AT5G49060 50.746 67 28 2 91 155 100 163 7.80e-11 63.5
MsG0780041351.01.T01 AT5G49060 50.746 67 28 2 91 155 100 163 7.80e-11 63.5

Find 109 sgRNAs with CRISPR-Local

Find 428 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATTAGAATTTGGGAATT+AGG 0.151861 7:-89872635 None:intergenic
ATGTGATTGGAATTAGAATT+TGG 0.171341 7:-89872643 None:intergenic
ATGGAGAATCTGGAGATTTA+AGG 0.175844 7:+89877317 MsG0780041351.01.T01:CDS
TCCAGATTCTCCATCAATTA+TGG 0.185165 7:-89877308 None:intergenic
AATGTTTCTTTCAGTTTCTT+TGG 0.228428 7:+89873960 MsG0780041351.01.T01:intron
TTTCGAGAAACGGTAATAAA+AGG 0.255311 7:-89872795 None:intergenic
CGACGACGTTATTGTTGATT+TGG 0.287066 7:+89874025 MsG0780041351.01.T01:CDS
TTGAACTTCCTTACTTGCTT+TGG 0.294218 7:-89877918 None:intergenic
AACCCTTGAAGATTTGTATA+TGG 0.319394 7:+89874052 MsG0780041351.01.T01:CDS
GAGGTTTATCACAGGCAAAT+TGG 0.319956 7:+89874791 MsG0780041351.01.T01:CDS
GAATTAGAATTTGGGAATTA+GGG 0.327716 7:-89872634 None:intergenic
GTCATTTGTTGAAACATTCC+AGG 0.330187 7:-89874815 None:intergenic
TTATTAGCTTCTTCATTTCC+CGG 0.331012 7:-89872968 None:intergenic
TCATTTCCCGGATTCTTATC+AGG 0.331429 7:-89872956 None:intergenic
CCCATAATTGATGGAGAATC+TGG 0.346187 7:+89877307 MsG0780041351.01.T01:CDS
TGTGATTGGAATTAGAATTT+GGG 0.350143 7:-89872642 None:intergenic
AGAATTTGGGAATTAGGGTT+TGG 0.351219 7:-89872629 None:intergenic
CTTTAGGTTCAAGCTCTTGT+TGG 0.355874 7:+89877730 MsG0780041351.01.T01:intron
TCTCTCCGAAACGCAATCTC+AGG 0.359226 7:-89872673 None:intergenic
TTTGCTTATAAATCTATGTT+TGG 0.369209 7:+89872835 MsG0780041351.01.T01:CDS
CCAGATTCTCCATCAATTAT+GGG 0.369755 7:-89877307 None:intergenic
CTCAGGGATTTCGATGTGAT+TGG 0.371305 7:-89872656 None:intergenic
TGGAGAATCTGGAGATTTAA+GGG 0.381629 7:+89877318 MsG0780041351.01.T01:CDS
AGAAATATTTATGATAAGTA+TGG 0.388738 7:+89873428 MsG0780041351.01.T01:CDS
AGGTTTATCACAGGCAAATT+GGG 0.390498 7:+89874792 MsG0780041351.01.T01:CDS
GAATTTGGGAATTAGGGTTT+GGG 0.392506 7:-89872628 None:intergenic
ACAGAGAAGGAACAACAATT+TGG 0.396887 7:-89872724 None:intergenic
ATCAAAATAGCACCACAATA+AGG 0.397206 7:-89878252 None:intergenic
TTGATGCGCCATTGAAGATT+CGG 0.405772 7:-89872697 None:intergenic
CATTTCTTTCTTCAATTGCT+AGG 0.406440 7:-89878391 None:intergenic
TAAACACCTTGATGAACATT+TGG 0.407639 7:+89877768 MsG0780041351.01.T01:CDS
TTCTTGGTTAGAATACATTC+AGG 0.416876 7:+89878054 MsG0780041351.01.T01:exon
GTCACTGTTGATATTGAGAA+AGG 0.417431 7:+89875194 MsG0780041351.01.T01:CDS
AGCAAGTAAGGAAGTTCAAA+GGG 0.426789 7:+89877922 MsG0780041351.01.T01:CDS
GTCCTCAATGTAACATGATT+AGG 0.428431 7:+89878100 MsG0780041351.01.T01:three_prime_UTR
CATGCCGCTGGTGGAGGAAG+AGG 0.435113 7:+89873470 MsG0780041351.01.T01:CDS
ATGTTCATCAAGGTGTTTAA+CGG 0.438073 7:-89877764 None:intergenic
TCACAAATCCAAAGCAAGTA+AGG 0.443028 7:+89877910 MsG0780041351.01.T01:CDS
GTATCATCCTGATAAGAATC+CGG 0.445522 7:+89872949 MsG0780041351.01.T01:CDS
TTTCTTTCAGTTTCTTTGGC+GGG 0.452768 7:+89873964 MsG0780041351.01.T01:intron
TAAATGTGACCGCACCTTCA+AGG 0.454412 7:-89874081 None:intergenic
GACGGCGAGCCCATAATTGA+TGG 0.455291 7:+89877298 MsG0780041351.01.T01:CDS
CACCCATATACAAATCTTCA+AGG 0.462023 7:-89874055 None:intergenic
TTCTTTGTGCTCATATGCAA+TGG 0.465194 7:-89877954 None:intergenic
TATGATAAGTATGGTGAAGA+GGG 0.468509 7:+89873437 MsG0780041351.01.T01:CDS
GCATCTACTGTGATCCTTGT+CGG 0.469809 7:+89878219 MsG0780041351.01.T01:three_prime_UTR
AATGTTGTAAAGCCAGCTCC+TGG 0.471578 7:+89874743 MsG0780041351.01.T01:CDS
GTATATGGGTGGTTCCTTGA+AGG 0.471939 7:+89874067 MsG0780041351.01.T01:CDS
TTCTTTCAGTTTCTTTGGCG+GGG 0.473982 7:+89873965 MsG0780041351.01.T01:intron
ACCCTTGAAGATTTGTATAT+GGG 0.478838 7:+89874053 MsG0780041351.01.T01:CDS
ATTTCTTTCTTCAATTGCTA+GGG 0.482619 7:-89878390 None:intergenic
AGCTTGCTTTGTGTCTGCAA+TGG 0.486629 7:+89878320 MsG0780041351.01.T01:three_prime_UTR
GGAGAGATCCGAATCTTCAA+TGG 0.487027 7:+89872689 MsG0780041351.01.T01:CDS
GAAAGGCATGAAAGATGGCC+AGG 0.488282 7:+89875211 MsG0780041351.01.T01:CDS
AAGCAGCATGCCGCTGGTGG+AGG 0.488986 7:+89873464 MsG0780041351.01.T01:CDS
GTTTCTTTCAGTTTCTTTGG+CGG 0.494548 7:+89873963 MsG0780041351.01.T01:intron
GTGCTAATGTCAAATACGTA+AGG 0.495722 7:+89875159 MsG0780041351.01.T01:CDS
TTACAACAAATACACGCCTT+AGG 0.499816 7:+89878133 MsG0780041351.01.T01:three_prime_UTR
TATCACAGGCAAATTGGGCC+TGG 0.501769 7:+89874797 MsG0780041351.01.T01:CDS
GTTGCTGCTGTCAGCATATG+AGG 0.502282 7:+89873385 MsG0780041351.01.T01:intron
AGAAGCTAATAAGAAATTTG+CGG 0.505990 7:+89872979 MsG0780041351.01.T01:CDS
AAATCCCTGAGATTGCGTTT+CGG 0.510468 7:+89872668 MsG0780041351.01.T01:CDS
CTGTTCCTCCGATAGTGAGG+TGG 0.511479 7:-89878012 None:intergenic
TATCATCCTGATAAGAATCC+GGG 0.516808 7:+89872950 MsG0780041351.01.T01:CDS
GCCGCTGGTGGAGGAAGAGG+TGG 0.524267 7:+89873473 MsG0780041351.01.T01:CDS
GCTGGTGGAGGAAGAGGTGG+TGG 0.526997 7:+89873476 MsG0780041351.01.T01:CDS
GTCAGCATATGAGGTATTGT+CGG 0.527426 7:+89873394 MsG0780041351.01.T01:intron
TGTTCCTCCGATAGTGAGGT+GGG 0.527665 7:-89878011 None:intergenic
TTGAAGCAGCATGCCGCTGG+TGG 0.528180 7:+89873461 MsG0780041351.01.T01:CDS
CATCTTGTGAGCAAGGTGAA+AGG 0.531664 7:+89878347 MsG0780041351.01.T01:three_prime_UTR
GGTTTGAAGCAGCATGCCGC+TGG 0.535682 7:+89873458 MsG0780041351.01.T01:CDS
ATTGTAATTATCAGGTTTGG+AGG 0.539622 7:+89874714 MsG0780041351.01.T01:intron
TCTGTTCCCCACCTCACTAT+CGG 0.540991 7:+89878004 MsG0780041351.01.T01:CDS
TCTTTCAGTTTCTTTGGCGG+GGG 0.541453 7:+89873966 MsG0780041351.01.T01:intron
TTGCATATGAGCACAAAGAA+AGG 0.546751 7:+89877957 MsG0780041351.01.T01:CDS
ATTGAGAAAGGCATGAAAGA+TGG 0.548944 7:+89875206 MsG0780041351.01.T01:CDS
CTTGAAGATTTGTATATGGG+TGG 0.550525 7:+89874056 MsG0780041351.01.T01:CDS
TTGTAATTATCAGGTTTGGA+GGG 0.555966 7:+89874715 MsG0780041351.01.T01:intron
AAGCAAGTAAGGAAGTTCAA+AGG 0.564203 7:+89877921 MsG0780041351.01.T01:CDS
TTATGATAAGTATGGTGAAG+AGG 0.574404 7:+89873436 MsG0780041351.01.T01:CDS
TGTCTACCAAATGTTCATCA+AGG 0.574433 7:-89877774 None:intergenic
GTTTCAACAAATGACAGAGC+AGG 0.577760 7:+89874823 MsG0780041351.01.T01:CDS
CTCTCCGAAACGCAATCTCA+GGG 0.582900 7:-89872672 None:intergenic
GTAAGGAAGTTCAAAGGGGA+GGG 0.585483 7:+89877927 MsG0780041351.01.T01:CDS
CACCTAATCATGTTACATTG+AGG 0.596632 7:-89878102 None:intergenic
ACGCTGTAACTGTAGAAATG+AGG 0.598744 7:+89874772 MsG0780041351.01.T01:CDS
TGCTAATGTCAAATACGTAA+GGG 0.599841 7:+89875160 MsG0780041351.01.T01:CDS
TCAAGTGTCGAAAGGTGCAT+CGG 0.599920 7:+89872886 MsG0780041351.01.T01:CDS
AATAGCATAGAGCACAGAGA+AGG 0.608834 7:-89872737 None:intergenic
AGTAAGGAAGTTCAAAGGGG+AGG 0.612915 7:+89877926 MsG0780041351.01.T01:CDS
ACCACCTCTTCCTCCACCAG+CGG 0.613282 7:-89873474 None:intergenic
GGCACATGAGTGCCTTATTG+TGG 0.615842 7:+89878240 MsG0780041351.01.T01:three_prime_UTR
AAGGCACTCATGTGCCGACA+AGG 0.617284 7:-89878233 None:intergenic
AAATTTGCGGAGATTAGCAA+TGG 0.617908 7:+89872992 MsG0780041351.01.T01:CDS
GTAGAAATGAGGTTTATCAC+AGG 0.618569 7:+89874783 MsG0780041351.01.T01:CDS
AATGTCAAATACGTAAGGGA+GGG 0.618582 7:+89875164 MsG0780041351.01.T01:CDS
AGGTGGTGGAATGAACATGC+AGG 0.620609 7:+89873490 MsG0780041351.01.T01:CDS
TTTCTGTTCCTCCGATAGTG+AGG 0.622344 7:-89878015 None:intergenic
GAAGAAGAGAAAATTGCGAA+AGG 0.633709 7:+89874002 MsG0780041351.01.T01:CDS
TAATGTCAAATACGTAAGGG+AGG 0.634516 7:+89875163 MsG0780041351.01.T01:CDS
ACCCATATACAAATCTTCAA+GGG 0.634761 7:-89874054 None:intergenic
GATATACTTCAAGTGTCGAA+AGG 0.635494 7:+89872878 MsG0780041351.01.T01:CDS
CACGACTGTCACTATCACGC+TGG 0.651681 7:+89877489 MsG0780041351.01.T01:CDS
GTTCCTCCGATAGTGAGGTG+GGG 0.652557 7:-89878010 None:intergenic
TTTGGTAGACATAAGCTCGA+AGG 0.653250 7:+89877786 MsG0780041351.01.T01:CDS
CTCAATGTAACATGATTAGG+TGG 0.663853 7:+89878103 MsG0780041351.01.T01:three_prime_UTR
GTTCCCCACCTCACTATCGG+AGG 0.706891 7:+89878007 MsG0780041351.01.T01:CDS
GCAAGTAAGGAAGTTCAAAG+GGG 0.733693 7:+89877923 MsG0780041351.01.T01:CDS
AAAGTTCATGAGGTGCTGTG+CGG 0.790333 7:-89877441 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAAATAATATATGTTTA+TGG + Chr7:89873657-89873676 MsG0780041351.01.T01:intron 10.0%
!! ATATATAAATTAAACATTTC+TGG - Chr7:89874990-89875009 None:intergenic 10.0%
!!! AATAAAAATAAAGTATCTAT+TGG - Chr7:89878187-89878206 None:intergenic 10.0%
!!! ATATTTTTATAAGCTATATT+AGG + Chr7:89873202-89873221 MsG0780041351.01.T01:intron 10.0%
!!! TATTTTTATAAGCTATATTA+GGG + Chr7:89873203-89873222 MsG0780041351.01.T01:intron 10.0%
!!! TTTTATTTATGATTTTCTAT+TGG - Chr7:89874337-89874356 None:intergenic 10.0%
!! AAAATATACATCCTAAAAAA+TGG - Chr7:89874902-89874921 None:intergenic 15.0%
!! AAGGATAAACATAAAAAATA+CGG + Chr7:89876722-89876741 MsG0780041351.01.T01:intron 15.0%
!! AATGACTATATTAAAATTTG+TGG - Chr7:89873806-89873825 None:intergenic 15.0%
!! ACAAAAATAAAATCAATTCT+TGG + Chr7:89878038-89878057 MsG0780041351.01.T01:CDS 15.0%
!! AGAAATATTTATGATAAGTA+TGG + Chr7:89873428-89873447 MsG0780041351.01.T01:CDS 15.0%
!! ATTATTGTATTGTAATTATC+AGG + Chr7:89874706-89874725 MsG0780041351.01.T01:intron 15.0%
!! GTATTTAATTATTTACCAAT+GGG + Chr7:89874141-89874160 MsG0780041351.01.T01:intron 15.0%
!! TGTATTTAATTATTTACCAA+TGG + Chr7:89874140-89874159 MsG0780041351.01.T01:intron 15.0%
!!! ATTTTTATAAGCTATATTAG+GGG + Chr7:89873204-89873223 MsG0780041351.01.T01:intron 15.0%
!!! CATAAATTTTTGCAAATATT+CGG - Chr7:89875098-89875117 None:intergenic 15.0%
!!! GATATAAATTAAGTTTGTTT+TGG - Chr7:89876676-89876695 None:intergenic 15.0%
!!! TTTCCTTTAAAAAAAAAACA+AGG - Chr7:89877011-89877030 None:intergenic 15.0%
!! AACCATTAATAACCAAAATA+AGG - Chr7:89873355-89873374 None:intergenic 20.0%
!! AATATTTATTTACCCTGATA+GGG + Chr7:89875584-89875603 MsG0780041351.01.T01:intron 20.0%
!! ACATTTCAGATATGTATTAT+CGG + Chr7:89873584-89873603 MsG0780041351.01.T01:intron 20.0%
!! ACCATTAATAACCAAAATAA+GGG - Chr7:89873354-89873373 None:intergenic 20.0%
!! AGTGAAAATGTTTACTTATA+AGG + Chr7:89873173-89873192 MsG0780041351.01.T01:intron 20.0%
!! ATTGGTTAACTAACAAAAAA+TGG - Chr7:89878169-89878188 None:intergenic 20.0%
!! GTCATTTAAATCTAAATCTT+AGG - Chr7:89876802-89876821 None:intergenic 20.0%
!! TAATATTTATTTACCCTGAT+AGG + Chr7:89875583-89875602 MsG0780041351.01.T01:intron 20.0%
!! TACATAAACACTTATATGAT+AGG - Chr7:89873121-89873140 None:intergenic 20.0%
!! TAGTTTATGCAAATATTAGA+TGG + Chr7:89876973-89876992 MsG0780041351.01.T01:intron 20.0%
!! TGAAAGAAACATTCATATTT+CGG - Chr7:89873953-89873972 None:intergenic 20.0%
!! TGAATAATATACTAGTAGAT+GGG + Chr7:89874228-89874247 MsG0780041351.01.T01:intron 20.0%
!! TGTCTTAGAAAAACTATATA+TGG + Chr7:89875760-89875779 MsG0780041351.01.T01:intron 20.0%
!! TTGAATAATATACTAGTAGA+TGG + Chr7:89874227-89874246 MsG0780041351.01.T01:intron 20.0%
!! TTGGTTAACTAACAAAAAAT+GGG - Chr7:89878168-89878187 None:intergenic 20.0%
!! TTTGCTTATAAATCTATGTT+TGG + Chr7:89872835-89872854 MsG0780041351.01.T01:CDS 20.0%
!!! AACTTTTAAAGTTTGTATGT+AGG + Chr7:89875236-89875255 MsG0780041351.01.T01:intron 20.0%
!!! AATATCTGAGATTTATCAAA+AGG - Chr7:89874480-89874499 None:intergenic 20.0%
!!! ATATCTGAGATTTATCAAAA+GGG - Chr7:89874479-89874498 None:intergenic 20.0%
!!! CCAAAAAATTCAAGTTATTT+TGG + Chr7:89876538-89876557 MsG0780041351.01.T01:intron 20.0%
!!! CCAAAATAACTTGAATTTTT+TGG - Chr7:89876541-89876560 None:intergenic 20.0%
!!! GATCCTTGTTTTTTTTTTAA+AGG + Chr7:89877005-89877024 MsG0780041351.01.T01:intron 20.0%
!!! TACTTTATTTTTACTTGCAT+TGG + Chr7:89873612-89873631 MsG0780041351.01.T01:intron 20.0%
!!! TATTAGAAGAGATTTTTGAA+GGG + Chr7:89876356-89876375 MsG0780041351.01.T01:intron 20.0%
!!! TGTATGCTAATTTTTAGTAT+GGG + Chr7:89873900-89873919 MsG0780041351.01.T01:intron 20.0%
!!! TGTTTTGGTCAAAAAAAAAA+TGG - Chr7:89876661-89876680 None:intergenic 20.0%
!!! TTGTATGCTAATTTTTAGTA+TGG + Chr7:89873899-89873918 MsG0780041351.01.T01:intron 20.0%
!!! TTTATTCTTGTCCATTTTTT+AGG + Chr7:89874888-89874907 MsG0780041351.01.T01:intron 20.0%
!!! TTTTTATAAGCTATATTAGG+GGG + Chr7:89873205-89873224 MsG0780041351.01.T01:intron 20.0%
! AAAAATGGACAAGAATAAAC+AGG - Chr7:89874887-89874906 None:intergenic 25.0%
! AAACAATGTTCAATACAAGA+AGG + Chr7:89876703-89876722 MsG0780041351.01.T01:intron 25.0%
! AAACTGTTCATATTAGCATA+TGG - Chr7:89877416-89877435 None:intergenic 25.0%
! AATCTTAGGTGAAGTTTATT+AGG - Chr7:89876788-89876807 None:intergenic 25.0%
! AATGTTTCTTTCAGTTTCTT+TGG + Chr7:89873960-89873979 MsG0780041351.01.T01:intron 25.0%
! AGAAGCTAATAAGAAATTTG+CGG + Chr7:89872979-89872998 MsG0780041351.01.T01:CDS 25.0%
! AGGAAAACAGAAAAATTACA+CGG - Chr7:89872778-89872797 None:intergenic 25.0%
! ATGTGATTGGAATTAGAATT+TGG - Chr7:89872646-89872665 None:intergenic 25.0%
! ATTATCACACTAACTGTAAT+CGG + Chr7:89873718-89873737 MsG0780041351.01.T01:intron 25.0%
! CTTGACTAATTGAATGTTTA+TGG + Chr7:89877236-89877255 MsG0780041351.01.T01:intron 25.0%
! GAATCAATAAAACCATATGA+AGG - Chr7:89873746-89873765 None:intergenic 25.0%
! GAATTAGAATTTGGGAATTA+GGG - Chr7:89872637-89872656 None:intergenic 25.0%
! TGGTTAACTAACAAAAAATG+GGG - Chr7:89878167-89878186 None:intergenic 25.0%
! TGTATTGTAATTATCAGGTT+TGG + Chr7:89874711-89874730 MsG0780041351.01.T01:intron 25.0%
! TGTGATTGGAATTAGAATTT+GGG - Chr7:89872645-89872664 None:intergenic 25.0%
! TTATGCAAATATTAGATGGT+GGG + Chr7:89876977-89876996 MsG0780041351.01.T01:intron 25.0%
! TTTAATACTTACTACAACAG+TGG - Chr7:89877598-89877617 None:intergenic 25.0%
! TTTATGCAAATATTAGATGG+TGG + Chr7:89876976-89876995 MsG0780041351.01.T01:intron 25.0%
!! AACTAATTTTCAGCTTAAAC+AGG - Chr7:89876958-89876977 None:intergenic 25.0%
!! ACAAACTTTAAAAGTTTACC+TGG - Chr7:89875232-89875251 None:intergenic 25.0%
!! ATGTGATAGTGTTAACTTAT+AGG - Chr7:89873568-89873587 None:intergenic 25.0%
!! CATTTGCTAACAAAAATGAA+AGG - Chr7:89877354-89877373 None:intergenic 25.0%
!! CTATTAGAAGAGATTTTTGA+AGG + Chr7:89876355-89876374 MsG0780041351.01.T01:intron 25.0%
!! GTATTTTCATTGAGAAAATC+AGG + Chr7:89874529-89874548 MsG0780041351.01.T01:intron 25.0%
!! TTTTATAAGCTATATTAGGG+GGG + Chr7:89873206-89873225 MsG0780041351.01.T01:intron 25.0%
!!! ATATAGTTTTTCTAAGACAC+TGG - Chr7:89875759-89875778 None:intergenic 25.0%
!!! ATTAAGTTGAAAACAGCTTA+TGG + Chr7:89873237-89873256 MsG0780041351.01.T01:intron 25.0%
!!! CTAGGGATATTTTGTTTAAT+TGG - Chr7:89878376-89878395 None:intergenic 25.0%
!!! GAGTGTTTTTTTGTTTTGAA+TGG + Chr7:89876026-89876045 MsG0780041351.01.T01:intron 25.0%
!!! GTATGCTAATTTTTAGTATG+GGG + Chr7:89873901-89873920 MsG0780041351.01.T01:intron 25.0%
!!! TCCCTTATTTTGGTTATTAA+TGG + Chr7:89873350-89873369 MsG0780041351.01.T01:intron 25.0%
!!! TTGTTTTGAATGGAGTATTA+TGG + Chr7:89876036-89876055 MsG0780041351.01.T01:intron 25.0%
AAAGATGGAAAATGGATCAA+GGG - Chr7:89877126-89877145 None:intergenic 30.0%
AACCCTTGAAGATTTGTATA+TGG + Chr7:89874052-89874071 MsG0780041351.01.T01:CDS 30.0%
AACTAAGAAGAACTGCTTTA+GGG + Chr7:89874392-89874411 MsG0780041351.01.T01:intron 30.0%
AATACAAAATCCCCCTAATT+TGG + Chr7:89876319-89876338 MsG0780041351.01.T01:intron 30.0%
AATATACTAGTAGATGGGTA+TGG + Chr7:89874233-89874252 MsG0780041351.01.T01:intron 30.0%
ACCCATATACAAATCTTCAA+GGG - Chr7:89874057-89874076 None:intergenic 30.0%
ACCCTTGAAGATTTGTATAT+GGG + Chr7:89874053-89874072 MsG0780041351.01.T01:CDS 30.0%
ACTTATTCGAAATTATCGAG+TGG - Chr7:89873318-89873337 None:intergenic 30.0%
AGGGACAAAAGAAATATGTT+AGG - Chr7:89877883-89877902 None:intergenic 30.0%
ATACAAAATCCCCCTAATTT+GGG + Chr7:89876320-89876339 MsG0780041351.01.T01:intron 30.0%
ATATACTAGTAGATGGGTAT+GGG + Chr7:89874234-89874253 MsG0780041351.01.T01:intron 30.0%
ATCAAAATAGCACCACAATA+AGG - Chr7:89878255-89878274 None:intergenic 30.0%
ATTATGTTGTCATGTGTAAG+TGG + Chr7:89873841-89873860 MsG0780041351.01.T01:intron 30.0%
ATTGTAATTATCAGGTTTGG+AGG + Chr7:89874714-89874733 MsG0780041351.01.T01:intron 30.0%
CCACTATTCATGTATTATCA+TGG + Chr7:89874563-89874582 MsG0780041351.01.T01:intron 30.0%
CCATGATAATACATGAATAG+TGG - Chr7:89874566-89874585 None:intergenic 30.0%
CTAAGAAAAGCAGTTATAGA+AGG + Chr7:89873680-89873699 MsG0780041351.01.T01:intron 30.0%
CTTAAAAGCTAGCTATCAAA+GGG - Chr7:89875678-89875697 None:intergenic 30.0%
GACATTTCATTGTATGATTG+TGG + Chr7:89874961-89874980 MsG0780041351.01.T01:intron 30.0%
GGAATTAGAATTTGGGAATT+AGG - Chr7:89872638-89872657 None:intergenic 30.0%
GGTTAACTAACAAAAAATGG+GGG - Chr7:89878166-89878185 None:intergenic 30.0%
GTATTAAACAGTAACTAGCA+TGG + Chr7:89877610-89877629 MsG0780041351.01.T01:intron 30.0%
GTTAAGAACTAATCAAGCAA+AGG - Chr7:89873546-89873565 None:intergenic 30.0%
TAAAAATTGATGCAGACATG+AGG - Chr7:89873778-89873797 None:intergenic 30.0%
TAAACACCTTGATGAACATT+TGG + Chr7:89877768-89877787 MsG0780041351.01.T01:CDS 30.0%
TAGACATGCTTATAAGTGTA+GGG - Chr7:89875321-89875340 None:intergenic 30.0%
TATGATAAGTATGGTGAAGA+GGG + Chr7:89873437-89873456 MsG0780041351.01.T01:CDS 30.0%
TGCTAATGTCAAATACGTAA+GGG + Chr7:89875160-89875179 MsG0780041351.01.T01:CDS 30.0%
TGTGAATCAAGTCAAATGAT+AGG - Chr7:89876824-89876843 None:intergenic 30.0%
TTAAAAGCTAGCTATCAAAG+GGG - Chr7:89875677-89875696 None:intergenic 30.0%
TTAGACATGCTTATAAGTGT+AGG - Chr7:89875322-89875341 None:intergenic 30.0%
TTATGATAAGTATGGTGAAG+AGG + Chr7:89873436-89873455 MsG0780041351.01.T01:CDS 30.0%
TTCTTGGTTAGAATACATTC+AGG + Chr7:89878054-89878073 MsG0780041351.01.T01:exon 30.0%
TTGTAATTATCAGGTTTGGA+GGG + Chr7:89874715-89874734 MsG0780041351.01.T01:intron 30.0%
TTTAGTTGTACCTTACCTTT+CGG + Chr7:89877533-89877552 MsG0780041351.01.T01:intron 30.0%
TTTATAAGCTATATTAGGGG+GGG + Chr7:89873207-89873226 MsG0780041351.01.T01:intron 30.0%
TTTCACTCCTCTATATTACT+TGG - Chr7:89877064-89877083 None:intergenic 30.0%
TTTCGAGAAACGGTAATAAA+AGG - Chr7:89872798-89872817 None:intergenic 30.0%
! AATAACACTTTGAGAATGGT+TGG - Chr7:89877153-89877172 None:intergenic 30.0%
! ACCTCATGAACTTTTCAAAA+GGG + Chr7:89877450-89877469 MsG0780041351.01.T01:CDS 30.0%
! AGGTGTGTTTCAATGTTTTT+GGG - Chr7:89877863-89877882 None:intergenic 30.0%
! ATGTTCATCAAGGTGTTTAA+CGG - Chr7:89877767-89877786 None:intergenic 30.0%
! GCAAAATAACACTTTGAGAA+TGG - Chr7:89877157-89877176 None:intergenic 30.0%
! TAGGTGTGTTTCAATGTTTT+TGG - Chr7:89877864-89877883 None:intergenic 30.0%
! TTATTAGCTTCTTCATTTCC+CGG - Chr7:89872971-89872990 None:intergenic 30.0%
!! ATACAAACAGTCCCTTATTT+TGG + Chr7:89873340-89873359 MsG0780041351.01.T01:intron 30.0%
!! TCAACAACATTTTCGAGAAA+CGG - Chr7:89872808-89872827 None:intergenic 30.0%
!! TTAAGAGAAGTGCTATGATA+GGG + Chr7:89875844-89875863 MsG0780041351.01.T01:intron 30.0%
!!! AATTTTTTGGCTCAAGCTAA+AGG - Chr7:89876528-89876547 None:intergenic 30.0%
!!! ATTTTGAGTTTCCCCAAATT+AGG - Chr7:89876335-89876354 None:intergenic 30.0%
!!! CTTTGATAGCTAGCTTTTAA+GGG + Chr7:89875677-89875696 MsG0780041351.01.T01:intron 30.0%
!!! TAATTTTTAGTATGGGGTTC+TGG + Chr7:89873907-89873926 MsG0780041351.01.T01:intron 30.0%
!!! TTTTGAGTTTCCCCAAATTA+GGG - Chr7:89876334-89876353 None:intergenic 30.0%
!!! TTTTTTCCTTATGTGCTTGA+GGG + Chr7:89875038-89875057 MsG0780041351.01.T01:intron 30.0%
AAAGGCTCTATTTGGGAATT+TGG - Chr7:89876510-89876529 None:intergenic 35.0%
AAATTTGCGGAGATTAGCAA+TGG + Chr7:89872992-89873011 MsG0780041351.01.T01:CDS 35.0%
AACTAATCAAGCAAAGGCTA+AGG - Chr7:89873540-89873559 None:intergenic 35.0%
AAGCAAGTAAGGAAGTTCAA+AGG + Chr7:89877921-89877940 MsG0780041351.01.T01:CDS 35.0%
AATGTCAAATACGTAAGGGA+GGG + Chr7:89875164-89875183 MsG0780041351.01.T01:CDS 35.0%
ACACCCTTAAAATTGAAGCT+AGG - Chr7:89876934-89876953 None:intergenic 35.0%
ACAGAAAAATTACACGGCAA+TGG - Chr7:89872772-89872791 None:intergenic 35.0%
ACAGAGAAGGAACAACAATT+TGG - Chr7:89872727-89872746 None:intergenic 35.0%
ACTAAGAAGAACTGCTTTAG+GGG + Chr7:89874393-89874412 MsG0780041351.01.T01:intron 35.0%
ACTTGCGAATTCTACACTTT+GGG - Chr7:89874663-89874682 None:intergenic 35.0%
AGAATTTGGGAATTAGGGTT+TGG - Chr7:89872632-89872651 None:intergenic 35.0%
AGCAAGTAAGGAAGTTCAAA+GGG + Chr7:89877922-89877941 MsG0780041351.01.T01:CDS 35.0%
AGCAGTTATAGAAGGCTATT+AGG + Chr7:89873688-89873707 MsG0780041351.01.T01:intron 35.0%
AGCTATGCATATGGTCATTT+GGG - Chr7:89876181-89876200 None:intergenic 35.0%
AGGTTTATCACAGGCAAATT+GGG + Chr7:89874792-89874811 MsG0780041351.01.T01:CDS 35.0%
AGTGTTATCCAAAATCCGAA+AGG - Chr7:89877551-89877570 None:intergenic 35.0%
ATGATAGGGACTTGCATATT+AGG + Chr7:89875858-89875877 MsG0780041351.01.T01:intron 35.0%
ATGGAGAATCTGGAGATTTA+AGG + Chr7:89877317-89877336 MsG0780041351.01.T01:CDS 35.0%
CAACTAAGAAGAACTGCTTT+AGG + Chr7:89874391-89874410 MsG0780041351.01.T01:intron 35.0%
CAATTAGTCAAGTTTCGACT+TGG - Chr7:89877228-89877247 None:intergenic 35.0%
CACCCATATACAAATCTTCA+AGG - Chr7:89874058-89874077 None:intergenic 35.0%
CACCTAATCATGTTACATTG+AGG - Chr7:89878105-89878124 None:intergenic 35.0%
CAGTGGTTCTTACTACTTTA+GGG + Chr7:89876201-89876220 MsG0780041351.01.T01:intron 35.0%
CCAGATTCTCCATCAATTAT+GGG - Chr7:89877310-89877329 None:intergenic 35.0%
CCTTAAAAGCTAGCTATCAA+AGG - Chr7:89875679-89875698 None:intergenic 35.0%
CGTACAATAAACCAAATGGT+GGG - Chr7:89875933-89875952 None:intergenic 35.0%
CTAACTCTATCAAATGGGAA+AGG + Chr7:89876877-89876896 MsG0780041351.01.T01:intron 35.0%
CTATGTTCTTGATGTGTATG+GGG + Chr7:89873868-89873887 MsG0780041351.01.T01:intron 35.0%
CTCAATGTAACATGATTAGG+TGG + Chr7:89878103-89878122 MsG0780041351.01.T01:three_prime_UTR 35.0%
CTTGAAGATTTGTATATGGG+TGG + Chr7:89874056-89874075 MsG0780041351.01.T01:CDS 35.0%
GAAAGATGGAAAATGGATCA+AGG - Chr7:89877127-89877146 None:intergenic 35.0%
GAAGAAGAGAAAATTGCGAA+AGG + Chr7:89874002-89874021 MsG0780041351.01.T01:CDS 35.0%
GAATTTGGGAATTAGGGTTT+GGG - Chr7:89872631-89872650 None:intergenic 35.0%
GACACATATATGTTACCCAT+TGG - Chr7:89874159-89874178 None:intergenic 35.0%
GCACATAAGGAAAAAAGACA+AGG - Chr7:89875034-89875053 None:intergenic 35.0%
GCAGTTATAGAAGGCTATTA+GGG + Chr7:89873689-89873708 MsG0780041351.01.T01:intron 35.0%
GCTATGTTCTTGATGTGTAT+GGG + Chr7:89873867-89873886 MsG0780041351.01.T01:intron 35.0%
GGAAATAAAGAATAGCCTCT+GGG - Chr7:89874458-89874477 None:intergenic 35.0%
GGGTAAAAAAGAAAGTAGTG+TGG - Chr7:89877106-89877125 None:intergenic 35.0%
GTAGAAATGAGGTTTATCAC+AGG + Chr7:89874783-89874802 MsG0780041351.01.T01:CDS 35.0%
GTATCATCCTGATAAGAATC+CGG + Chr7:89872949-89872968 MsG0780041351.01.T01:CDS 35.0%
GTCACTGTTGATATTGAGAA+AGG + Chr7:89875194-89875213 MsG0780041351.01.T01:CDS 35.0%
GTCCTCAATGTAACATGATT+AGG + Chr7:89878100-89878119 MsG0780041351.01.T01:three_prime_UTR 35.0%
GTGCTAATGTCAAATACGTA+AGG + Chr7:89875159-89875178 MsG0780041351.01.T01:CDS 35.0%
GTGTAGGGCTTATAAGAAAA+TGG - Chr7:89875306-89875325 None:intergenic 35.0%
GTTTCTTTCAGTTTCTTTGG+CGG + Chr7:89873963-89873982 MsG0780041351.01.T01:intron 35.0%
TAATGTCAAATACGTAAGGG+AGG + Chr7:89875163-89875182 MsG0780041351.01.T01:CDS 35.0%
TACAAAATCCCCCTAATTTG+GGG + Chr7:89876321-89876340 MsG0780041351.01.T01:intron 35.0%
TAGATTCGAGACTATCATAC+TGG + Chr7:89874258-89874277 MsG0780041351.01.T01:intron 35.0%
TATCATCCTGATAAGAATCC+GGG + Chr7:89872950-89872969 MsG0780041351.01.T01:CDS 35.0%
TATCCAAAATCCGAAAGGTA+AGG - Chr7:89877546-89877565 None:intergenic 35.0%
TCAAGCTAAAGGCTCTATTT+GGG - Chr7:89876517-89876536 None:intergenic 35.0%
TCACAAATCCAAAGCAAGTA+AGG + Chr7:89877910-89877929 MsG0780041351.01.T01:CDS 35.0%
TCAGTGGTTCTTACTACTTT+AGG + Chr7:89876200-89876219 MsG0780041351.01.T01:intron 35.0%
TCCAGATTCTCCATCAATTA+TGG - Chr7:89877311-89877330 None:intergenic 35.0%
TCTTCTTTGCTGCTCTTAAT+TGG + Chr7:89877822-89877841 MsG0780041351.01.T01:intron 35.0%
TCTTGTGTAAAAAGAGGGTA+AGG - Chr7:89875959-89875978 None:intergenic 35.0%
TGAAGTTTATTAGGCGACAA+GGG - Chr7:89876779-89876798 None:intergenic 35.0%
TGATAGGGACTTGCATATTA+GGG + Chr7:89875859-89875878 MsG0780041351.01.T01:intron 35.0%
TGCAGCTAACTCTATCAAAT+GGG + Chr7:89876872-89876891 MsG0780041351.01.T01:intron 35.0%
TGCTATGTTCTTGATGTGTA+TGG + Chr7:89873866-89873885 MsG0780041351.01.T01:intron 35.0%
TGGAGAATCTGGAGATTTAA+GGG + Chr7:89877318-89877337 MsG0780041351.01.T01:CDS 35.0%
TGGTGTAGTTGTAAACTAAG+TGG + Chr7:89874583-89874602 MsG0780041351.01.T01:intron 35.0%
TGTCTACCAAATGTTCATCA+AGG - Chr7:89877777-89877796 None:intergenic 35.0%
TTACAACAAATACACGCCTT+AGG + Chr7:89878133-89878152 MsG0780041351.01.T01:three_prime_UTR 35.0%
TTCTTTGTGCTCATATGCAA+TGG - Chr7:89877957-89877976 None:intergenic 35.0%
TTGAACTTCCTTACTTGCTT+TGG - Chr7:89877921-89877940 None:intergenic 35.0%
TTGCAGCTAACTCTATCAAA+TGG + Chr7:89876871-89876890 MsG0780041351.01.T01:intron 35.0%
TTGCATATGAGCACAAAGAA+AGG + Chr7:89877957-89877976 MsG0780041351.01.T01:CDS 35.0%
TTGGTGAGAAAGATGGAAAA+TGG - Chr7:89877134-89877153 None:intergenic 35.0%
TTTCCAGGACTTGCATATTA+TGG + Chr7:89876004-89876023 MsG0780041351.01.T01:intron 35.0%
TTTCTTTCAGTTTCTTTGGC+GGG + Chr7:89873964-89873983 MsG0780041351.01.T01:intron 35.0%
! AAATTTTCTCAGCTGATCAG+TGG + Chr7:89876622-89876641 MsG0780041351.01.T01:intron 35.0%
! ACACTTGTTGATTGTGCAAA+CGG + Chr7:89877648-89877667 MsG0780041351.01.T01:intron 35.0%
! ACATATTTCTTTTGTCCCTC+AGG + Chr7:89877884-89877903 MsG0780041351.01.T01:intron 35.0%
! ACGACCTAGCTTCAATTTTA+AGG + Chr7:89876927-89876946 MsG0780041351.01.T01:intron 35.0%
! ATTGAGAAAGGCATGAAAGA+TGG + Chr7:89875206-89875225 MsG0780041351.01.T01:CDS 35.0%
! CACCTCATGAACTTTTCAAA+AGG + Chr7:89877449-89877468 MsG0780041351.01.T01:CDS 35.0%
! CATATTTCTTTTGTCCCTCA+GGG + Chr7:89877885-89877904 MsG0780041351.01.T01:intron 35.0%
! CATGAACTTTTCAAAAGGGA+AGG + Chr7:89877454-89877473 MsG0780041351.01.T01:CDS 35.0%
! CCTCTATATTACTTGGTAGT+CGG - Chr7:89877057-89877076 None:intergenic 35.0%
! CGACCTAGCTTCAATTTTAA+GGG + Chr7:89876928-89876947 MsG0780041351.01.T01:intron 35.0%
! GTCATTTGTTGAAACATTCC+AGG - Chr7:89874818-89874837 None:intergenic 35.0%
! TGTGGCATATTCAAAGCTTT+TGG - Chr7:89877088-89877107 None:intergenic 35.0%
! TTACCCTCTTTTTACACAAG+AGG + Chr7:89875958-89875977 MsG0780041351.01.T01:intron 35.0%
! TTTGAGTTTCCCCAAATTAG+GGG - Chr7:89876333-89876352 None:intergenic 35.0%
! TTTTTCCTTATGTGCTTGAG+GGG + Chr7:89875039-89875058 MsG0780041351.01.T01:intron 35.0%
!! CTTAAGAGAAGTGCTATGAT+AGG + Chr7:89875843-89875862 MsG0780041351.01.T01:intron 35.0%
!! GATATACTTCAAGTGTCGAA+AGG + Chr7:89872878-89872897 MsG0780041351.01.T01:CDS 35.0%
!! GGTGTGTTTCAATGTTTTTG+GGG - Chr7:89877862-89877881 None:intergenic 35.0%
!! TACTACTTTAGGGTCTGTTT+GGG + Chr7:89876211-89876230 MsG0780041351.01.T01:intron 35.0%
!! TCCCTTTTGAAAAGTTCATG+AGG - Chr7:89877454-89877473 None:intergenic 35.0%
!! TTACTACTTTAGGGTCTGTT+TGG + Chr7:89876210-89876229 MsG0780041351.01.T01:intron 35.0%
!!! AGATCTTTACGTCACTTTTG+AGG + Chr7:89877980-89877999 MsG0780041351.01.T01:CDS 35.0%
!!! ATTTTTTGTCCTTTCACAGG+AGG + Chr7:89877261-89877280 MsG0780041351.01.T01:intron 35.0%
!!! CCTTTGATAGCTAGCTTTTA+AGG + Chr7:89875676-89875695 MsG0780041351.01.T01:intron 35.0%
!!! CTTTTTTCCTTATGTGCTTG+AGG + Chr7:89875037-89875056 MsG0780041351.01.T01:intron 35.0%
!!! GCAATTTTTTGTCCTTTCAC+AGG + Chr7:89877258-89877277 MsG0780041351.01.T01:intron 35.0%
!!! TGCTTGTTTTAGTCCTTAAG+TGG + Chr7:89876091-89876110 MsG0780041351.01.T01:intron 35.0%
!!! TGTGGTGCTATTTTGATACA+AGG + Chr7:89878258-89878277 MsG0780041351.01.T01:three_prime_UTR 35.0%
!!! TGTTTCAATGTTTTTGGGGT+GGG - Chr7:89877858-89877877 None:intergenic 35.0%
AAAATAGCACCTCCTGTGAA+AGG - Chr7:89877273-89877292 None:intergenic 40.0%
AAATCCCTGAGATTGCGTTT+CGG + Chr7:89872668-89872687 MsG0780041351.01.T01:CDS 40.0%
AATAGCATAGAGCACAGAGA+AGG - Chr7:89872740-89872759 None:intergenic 40.0%
AATATGCAAGTCCTGGAAAC+AGG - Chr7:89876003-89876022 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAG+AGG - Chr7:89875965-89875984 None:intergenic 40.0%
ACGCTGTAACTGTAGAAATG+AGG + Chr7:89874772-89874791 MsG0780041351.01.T01:CDS 40.0%
ACTCCATAATATGCAAGTCC+TGG - Chr7:89876010-89876029 None:intergenic 40.0%
AGACTGCTTGAAAGAGCTTA+TGG - Chr7:89873281-89873300 None:intergenic 40.0%
AGTAACTAGCATGGAAGAGT+TGG + Chr7:89877619-89877638 MsG0780041351.01.T01:intron 40.0%
AGTGCTTATGAAATGGTACC+TGG + Chr7:89875725-89875744 MsG0780041351.01.T01:intron 40.0%
ATATGCAAGTCCTGGAAACA+GGG - Chr7:89876002-89876021 None:intergenic 40.0%
ATATGGAAGAGACACCAGAA+AGG + Chr7:89875777-89875796 MsG0780041351.01.T01:intron 40.0%
ATGCGATGCTCTAATTAGCT+TGG + Chr7:89875647-89875666 MsG0780041351.01.T01:intron 40.0%
ATTTGGGAATTTGGAGGGAA+GGG - Chr7:89876501-89876520 None:intergenic 40.0%
CAACAAGAGCTTGAACCTAA+AGG - Chr7:89877732-89877751 None:intergenic 40.0%
CACGCTGGTAAGTATAATCA+TGG + Chr7:89877504-89877523 MsG0780041351.01.T01:intron 40.0%
CAGCCTCTTGTGTAAAAAGA+GGG - Chr7:89875964-89875983 None:intergenic 40.0%
CCCATAATTGATGGAGAATC+TGG + Chr7:89877307-89877326 MsG0780041351.01.T01:CDS 40.0%
CCGACTACCAAGTAATATAG+AGG + Chr7:89877054-89877073 MsG0780041351.01.T01:intron 40.0%
CTCAAGCTAAAGGCTCTATT+TGG - Chr7:89876518-89876537 None:intergenic 40.0%
CTGTAATCGGAACCTTCATA+TGG + Chr7:89873731-89873750 MsG0780041351.01.T01:intron 40.0%
CTTGAACCTAAAGGAGATCA+AGG - Chr7:89877723-89877742 None:intergenic 40.0%
GACTTGCGAATTCTACACTT+TGG - Chr7:89874664-89874683 None:intergenic 40.0%
GAGCTATGCATATGGTCATT+TGG - Chr7:89876182-89876201 None:intergenic 40.0%
GAGGTTTATCACAGGCAAAT+TGG + Chr7:89874791-89874810 MsG0780041351.01.T01:CDS 40.0%
GCAAGTAAGGAAGTTCAAAG+GGG + Chr7:89877923-89877942 MsG0780041351.01.T01:CDS 40.0%
GCAGGTAAATATCATCTTCG+AGG + Chr7:89874841-89874860 MsG0780041351.01.T01:intron 40.0%
GCGTACAATAAACCAAATGG+TGG - Chr7:89875934-89875953 None:intergenic 40.0%
GCTCTATTTGGGAATTTGGA+GGG - Chr7:89876506-89876525 None:intergenic 40.0%
GCTGCGTACAATAAACCAAA+TGG - Chr7:89875937-89875956 None:intergenic 40.0%
GGGAAATAAAGAATAGCCTC+TGG - Chr7:89874459-89874478 None:intergenic 40.0%
GTGAAGTTTATTAGGCGACA+AGG - Chr7:89876780-89876799 None:intergenic 40.0%
GTGCTTATGAAATGGTACCT+GGG + Chr7:89875726-89875745 MsG0780041351.01.T01:intron 40.0%
GTGCTTGAGTGCTTATGAAA+TGG + Chr7:89875718-89875737 MsG0780041351.01.T01:intron 40.0%
GTGTAACCTTGATCTCCTTT+AGG + Chr7:89877714-89877733 MsG0780041351.01.T01:intron 40.0%
GTTTCAACAAATGACAGAGC+AGG + Chr7:89874823-89874842 MsG0780041351.01.T01:CDS 40.0%
TAATAGCCAAGTCCCTATCA+GGG - Chr7:89875599-89875618 None:intergenic 40.0%
TAGAAGCCAGTGTATTTGCA+GGG - Chr7:89874926-89874945 None:intergenic 40.0%
TATTTACCCTGATAGGGACT+TGG + Chr7:89875590-89875609 MsG0780041351.01.T01:intron 40.0%
TATTTGGGAATTTGGAGGGA+AGG - Chr7:89876502-89876521 None:intergenic 40.0%
TCATAAGCACTCAAGCACTT+GGG - Chr7:89875716-89875735 None:intergenic 40.0%
TCATTTCCCGGATTCTTATC+AGG - Chr7:89872959-89872978 None:intergenic 40.0%
TTAAGTGCCAAACGACTCAA+TGG - Chr7:89875828-89875847 None:intergenic 40.0%
TTCATAAGCACTCAAGCACT+TGG - Chr7:89875717-89875736 None:intergenic 40.0%
TTCTTTCAGTTTCTTTGGCG+GGG + Chr7:89873965-89873984 MsG0780041351.01.T01:intron 40.0%
TTGAGTTTCCCCAAATTAGG+GGG - Chr7:89876332-89876351 None:intergenic 40.0%
TTGATGCGCCATTGAAGATT+CGG - Chr7:89872700-89872719 None:intergenic 40.0%
TTGGATTTGTGATTCCCTGA+GGG - Chr7:89877902-89877921 None:intergenic 40.0%
TTTGGATTTGTGATTCCCTG+AGG - Chr7:89877903-89877922 None:intergenic 40.0%
TTTGGTAGACATAAGCTCGA+AGG + Chr7:89877786-89877805 MsG0780041351.01.T01:CDS 40.0%
! ATTTTGCCCTGCAAATACAC+TGG + Chr7:89874917-89874936 MsG0780041351.01.T01:intron 40.0%
! CGACGACGTTATTGTTGATT+TGG + Chr7:89874025-89874044 MsG0780041351.01.T01:CDS 40.0%
! CTTTAGGTTCAAGCTCTTGT+TGG + Chr7:89877730-89877749 MsG0780041351.01.T01:intron 40.0%
! GTACCTTACCTTTCGGATTT+TGG + Chr7:89877540-89877559 MsG0780041351.01.T01:intron 40.0%
! TGGTTTTCATCTTGTGAGCA+AGG + Chr7:89878340-89878359 MsG0780041351.01.T01:three_prime_UTR 40.0%
!! ACTACTTTAGGGTCTGTTTG+GGG + Chr7:89876212-89876231 MsG0780041351.01.T01:intron 40.0%
!! AGAATGGTTGGTGAGAAAGA+TGG - Chr7:89877141-89877160 None:intergenic 40.0%
!! GTCAGCATATGAGGTATTGT+CGG + Chr7:89873394-89873413 MsG0780041351.01.T01:intron 40.0%
!! GTTTTAGTCCTTAAGTGGCT+TGG + Chr7:89876096-89876115 MsG0780041351.01.T01:intron 40.0%
!!! ACAGGAGGTGCTATTTTATG+AGG + Chr7:89877276-89877295 MsG0780041351.01.T01:intron 40.0%
!!! GAGGTGCTATTTTATGAGGA+CGG + Chr7:89877280-89877299 MsG0780041351.01.T01:CDS 40.0%
!!! GTGTTTCAATGTTTTTGGGG+TGG - Chr7:89877859-89877878 None:intergenic 40.0%
AAAGCTAGCTATCAAAGGGG+AGG - Chr7:89875674-89875693 None:intergenic 45.0%
AACACGGTTGCTCATGTTCT+TGG - Chr7:89876756-89876775 None:intergenic 45.0%
AATGTTGTAAAGCCAGCTCC+TGG + Chr7:89874743-89874762 MsG0780041351.01.T01:CDS 45.0%
ACACGGTTGCTCATGTTCTT+GGG - Chr7:89876755-89876774 None:intergenic 45.0%
ACTTGCATATTAGGGCAACC+CGG + Chr7:89875867-89875886 MsG0780041351.01.T01:intron 45.0%
AGCTATATTAGGGGGGGTTA+TGG + Chr7:89873213-89873232 MsG0780041351.01.T01:intron 45.0%
AGTAAGGAAGTTCAAAGGGG+AGG + Chr7:89877926-89877945 MsG0780041351.01.T01:CDS 45.0%
AGTGCATCCATTGAGTCGTT+TGG + Chr7:89875818-89875837 MsG0780041351.01.T01:intron 45.0%
CATCTTGTGAGCAAGGTGAA+AGG + Chr7:89878347-89878366 MsG0780041351.01.T01:three_prime_UTR 45.0%
CTAGAAGCCAGTGTATTTGC+AGG - Chr7:89874927-89874946 None:intergenic 45.0%
CTCAGGGATTTCGATGTGAT+TGG - Chr7:89872659-89872678 None:intergenic 45.0%
CTGACATCATGTATTCCCAG+AGG + Chr7:89874440-89874459 MsG0780041351.01.T01:intron 45.0%
GAACCACTGAGCTATGCATA+TGG - Chr7:89876190-89876209 None:intergenic 45.0%
GATAGGGACTTGGCTATTAC+TGG + Chr7:89875600-89875619 MsG0780041351.01.T01:intron 45.0%
GCATCTACTGTGATCCTTGT+CGG + Chr7:89878219-89878238 MsG0780041351.01.T01:three_prime_UTR 45.0%
GGAGAGATCCGAATCTTCAA+TGG + Chr7:89872689-89872708 MsG0780041351.01.T01:CDS 45.0%
GGCTCTATTTGGGAATTTGG+AGG - Chr7:89876507-89876526 None:intergenic 45.0%
GGGAAAAACCAAGCCACTTA+AGG - Chr7:89876107-89876126 None:intergenic 45.0%
GTAAGGAAGTTCAAAGGGGA+GGG + Chr7:89877927-89877946 MsG0780041351.01.T01:CDS 45.0%
GTAATAGCCAAGTCCCTATC+AGG - Chr7:89875600-89875619 None:intergenic 45.0%
GTATATGGGTGGTTCCTTGA+AGG + Chr7:89874067-89874086 MsG0780041351.01.T01:CDS 45.0%
GTCGGAACTGATGTCAAACA+AGG - Chr7:89877039-89877058 None:intergenic 45.0%
TAAATGTGACCGCACCTTCA+AGG - Chr7:89874084-89874103 None:intergenic 45.0%
TAGCACATTGATCACAGACC+TGG - Chr7:89875145-89875164 None:intergenic 45.0%
TATTAGGCGACAAGGGAACA+CGG - Chr7:89876772-89876791 None:intergenic 45.0%
TCTTTCAGTTTCTTTGGCGG+GGG + Chr7:89873966-89873985 MsG0780041351.01.T01:intron 45.0%
TGACCATATGCATAGCTCAG+TGG + Chr7:89876184-89876203 MsG0780041351.01.T01:intron 45.0%
TGTGTGATATCTACCTGTCC+AGG + Chr7:89875124-89875143 MsG0780041351.01.T01:intron 45.0%
TTATGAAATGGTACCTGGGC+AGG + Chr7:89875730-89875749 MsG0780041351.01.T01:intron 45.0%
TTTCTGTTCCTCCGATAGTG+AGG - Chr7:89878018-89878037 None:intergenic 45.0%
TTTGGGAATTTGGAGGGAAG+GGG - Chr7:89876500-89876519 None:intergenic 45.0%
! AGCTTGCTTTGTGTCTGCAA+TGG + Chr7:89878320-89878339 MsG0780041351.01.T01:three_prime_UTR 45.0%
! CAGTTACAGCGTCTTTTTCC+AGG - Chr7:89874764-89874783 None:intergenic 45.0%
! TCTGTTTGGGGGTTTAGGAT+TGG + Chr7:89876224-89876243 MsG0780041351.01.T01:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + Chr7:89875969-89875988 MsG0780041351.01.T01:intron 45.0%
! TTTGGGGGTTTAGGATTGGA+GGG + Chr7:89876228-89876247 MsG0780041351.01.T01:intron 45.0%
!! AAAGTTCATGAGGTGCTGTG+CGG - Chr7:89877444-89877463 None:intergenic 45.0%
!! CTACTTTAGGGTCTGTTTGG+GGG + Chr7:89876213-89876232 MsG0780041351.01.T01:intron 45.0%
!! TCAAGTGTCGAAAGGTGCAT+CGG + Chr7:89872886-89872905 MsG0780041351.01.T01:CDS 45.0%
!! TTTTAGGAGGAAGGGCTTTG+GGG + Chr7:89876279-89876298 MsG0780041351.01.T01:intron 45.0%
!!! AAGGAATGGAGGGTTTTAGG+AGG + Chr7:89876266-89876285 MsG0780041351.01.T01:intron 45.0%
!!! AAGTGGCTTGGTTTTTCCCA+TGG + Chr7:89876108-89876127 MsG0780041351.01.T01:intron 45.0%
!!! AATGGAGGGTTTTAGGAGGA+AGG + Chr7:89876270-89876289 MsG0780041351.01.T01:intron 45.0%
!!! ATGGAGGGTTTTAGGAGGAA+GGG + Chr7:89876271-89876290 MsG0780041351.01.T01:intron 45.0%
!!! GGGTTCTGGACTTGCTTTTA+TGG + Chr7:89873921-89873940 MsG0780041351.01.T01:intron 45.0%
!!! GTTTTAGGAGGAAGGGCTTT+GGG + Chr7:89876278-89876297 MsG0780041351.01.T01:intron 45.0%
!!! TCCCATGGCAGCTAGTTTTA+CGG + Chr7:89876123-89876142 MsG0780041351.01.T01:intron 45.0%
!! AAATAAATATTATAATTGTT+GGG - Chr7:89875575-89875594 None:intergenic 5.0%
!! AATTTAATAATATCAATAAA+AGG - Chr7:89876607-89876626 None:intergenic 5.0%
!! TAAATAAATATTATAATTGT+TGG - Chr7:89875576-89875595 None:intergenic 5.0%
AATTCAGCACCCCAAGCATG+TGG - Chr7:89876157-89876176 None:intergenic 50.0%
ACGTTAAGCGGAAGGAATGG+AGG + Chr7:89876255-89876274 MsG0780041351.01.T01:intron 50.0%
AGGACGTTAAGCGGAAGGAA+TGG + Chr7:89876252-89876271 MsG0780041351.01.T01:intron 50.0%
AGGACTTGAACCCTGTTTCC+AGG + Chr7:89875989-89876008 MsG0780041351.01.T01:intron 50.0%
ATTCAGCACCCCAAGCATGT+GGG - Chr7:89876156-89876175 None:intergenic 50.0%
ATTGAAGCTCCCGCATATGC+AGG + Chr7:89875893-89875912 MsG0780041351.01.T01:intron 50.0%
CACTCAAGCACTTGGGAGTT+GGG - Chr7:89875709-89875728 None:intergenic 50.0%
CATTGATCACAGACCTGGAC+AGG - Chr7:89875140-89875159 None:intergenic 50.0%
CCCGTAAAACTAGCTGCCAT+GGG - Chr7:89876127-89876146 None:intergenic 50.0%
CGTTAAGCGGAAGGAATGGA+GGG + Chr7:89876256-89876275 MsG0780041351.01.T01:intron 50.0%
CTCTCCGAAACGCAATCTCA+GGG - Chr7:89872675-89872694 None:intergenic 50.0%
CTTATGTGCTTGAGGGGACT+GGG + Chr7:89875045-89875064 MsG0780041351.01.T01:intron 50.0%
GTTGCTGCTGTCAGCATATG+AGG + Chr7:89873385-89873404 MsG0780041351.01.T01:intron 50.0%
TAGGGTCTGTTTGGGGGTTT+AGG + Chr7:89876219-89876238 MsG0780041351.01.T01:intron 50.0%
TATCACAGGCAAATTGGGCC+TGG + Chr7:89874797-89874816 MsG0780041351.01.T01:CDS 50.0%
TCCCGTAAAACTAGCTGCCA+TGG - Chr7:89876128-89876147 None:intergenic 50.0%
TCTCTCCGAAACGCAATCTC+AGG - Chr7:89872676-89872695 None:intergenic 50.0%
TCTGTTCCCCACCTCACTAT+CGG + Chr7:89878004-89878023 MsG0780041351.01.T01:CDS 50.0%
TCTTGATGTGTATGGGGCTC+TGG + Chr7:89873874-89873893 MsG0780041351.01.T01:intron 50.0%
TGGAAACAGGGTTCAAGTCC+TGG - Chr7:89875990-89876009 None:intergenic 50.0%
TGTTCCTCCGATAGTGAGGT+GGG - Chr7:89878014-89878033 None:intergenic 50.0%
TTATGTGCTTGAGGGGACTG+GGG + Chr7:89875046-89875065 MsG0780041351.01.T01:intron 50.0%
TTGAAGCTCCCGCATATGCA+GGG + Chr7:89875894-89875913 MsG0780041351.01.T01:intron 50.0%
TTTCTTTGGCGGGGGATCAA+TGG + Chr7:89873974-89873993 MsG0780041351.01.T01:CDS 50.0%
! CGGAAGGAATGGAGGGTTTT+AGG + Chr7:89876263-89876282 MsG0780041351.01.T01:intron 50.0%
! GAAAGGCATGAAAGATGGCC+AGG + Chr7:89875211-89875230 MsG0780041351.01.T01:CDS 50.0%
! GGCACATGAGTGCCTTATTG+TGG + Chr7:89878240-89878259 MsG0780041351.01.T01:three_prime_UTR 50.0%
! GTTTGGGGGTTTAGGATTGG+AGG + Chr7:89876227-89876246 MsG0780041351.01.T01:intron 50.0%
! TTGGGGGTTTAGGATTGGAG+GGG + Chr7:89876229-89876248 MsG0780041351.01.T01:intron 50.0%
!! AGGTGGTGGAATGAACATGC+AGG + Chr7:89873490-89873509 MsG0780041351.01.T01:CDS 50.0%
!!! ACTGGTTTTCACGTGACACG+CGG + Chr7:89874276-89874295 MsG0780041351.01.T01:intron 50.0%
!!! ATGGCAGCTAGTTTTACGGG+AGG + Chr7:89876127-89876146 MsG0780041351.01.T01:intron 50.0%
!!! CCCATGGCAGCTAGTTTTAC+GGG + Chr7:89876124-89876143 MsG0780041351.01.T01:intron 50.0%
!!! GGTTTTAGGAGGAAGGGCTT+TGG + Chr7:89876277-89876296 MsG0780041351.01.T01:intron 50.0%
!!! TGGCAGCTAGTTTTACGGGA+GGG + Chr7:89876128-89876147 MsG0780041351.01.T01:intron 50.0%
AAATGGGGGCGAGAAGCCTA+AGG - Chr7:89878152-89878171 None:intergenic 55.0%
AACGCTCGACTCAGCCTTTC+TGG - Chr7:89875794-89875813 None:intergenic 55.0%
AAGACACTGGAAACCTGCCC+AGG - Chr7:89875746-89875765 None:intergenic 55.0%
ATGCGGGAGCTTCAATGCAC+CGG - Chr7:89875889-89875908 None:intergenic 55.0%
CACGACTGTCACTATCACGC+TGG + Chr7:89877489-89877508 MsG0780041351.01.T01:CDS 55.0%
CCAGTCCCCTCAAGCACATA+AGG - Chr7:89875047-89875066 None:intergenic 55.0%
CCTTATGTGCTTGAGGGGAC+TGG + Chr7:89875044-89875063 MsG0780041351.01.T01:intron 55.0%
CTGTTCCTCCGATAGTGAGG+TGG - Chr7:89878015-89878034 None:intergenic 55.0%
GACGGCGAGCCCATAATTGA+TGG + Chr7:89877298-89877317 MsG0780041351.01.T01:CDS 55.0%
GCACTCAAGCACTTGGGAGT+TGG - Chr7:89875710-89875729 None:intergenic 55.0%
GGAATTTGGAGGGAAGGGGA+GGG - Chr7:89876496-89876515 None:intergenic 55.0%
GTTCCTCCGATAGTGAGGTG+GGG - Chr7:89878013-89878032 None:intergenic 55.0%
TGGGTGGTTCCTTGAAGGTG+CGG + Chr7:89874072-89874091 MsG0780041351.01.T01:intron 55.0%
TTGGAGGGGAGGACGTTAAG+CGG + Chr7:89876243-89876262 MsG0780041351.01.T01:intron 55.0%
! AAGGCACTCATGTGCCGACA+AGG - Chr7:89878236-89878255 None:intergenic 55.0%
! CAGCGTCTTTTTCCAGGAGC+TGG - Chr7:89874758-89874777 None:intergenic 55.0%
ACCACCTCTTCCTCCACCAG+CGG - Chr7:89873477-89873496 None:intergenic 60.0%
AGGGGAGGACGTTAAGCGGA+AGG + Chr7:89876247-89876266 MsG0780041351.01.T01:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + Chr7:89875906-89875925 MsG0780041351.01.T01:intron 60.0%
CTTCCCGGACCCTGCATATG+CGG - Chr7:89875906-89875925 None:intergenic 60.0%
CTTTGGCGGGGGATCAATGG+AGG + Chr7:89873977-89873996 MsG0780041351.01.T01:CDS 60.0%
GCATATGCAGGGTCCGGGAA+GGG + Chr7:89875905-89875924 MsG0780041351.01.T01:intron 60.0%
GGAGGGTTCCCACATGCTTG+GGG + Chr7:89876145-89876164 MsG0780041351.01.T01:intron 60.0%
GGGAATTTGGAGGGAAGGGG+AGG - Chr7:89876497-89876516 None:intergenic 60.0%
GGGAGGGTTCCCACATGCTT+GGG + Chr7:89876144-89876163 MsG0780041351.01.T01:intron 60.0%
GTTCCCCACCTCACTATCGG+AGG + Chr7:89878007-89878026 MsG0780041351.01.T01:CDS 60.0%
TGCGGGAGCTTCAATGCACC+GGG - Chr7:89875888-89875907 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG - Chr7:89875905-89875924 None:intergenic 60.0%
TTGAAGCAGCATGCCGCTGG+TGG + Chr7:89873461-89873480 MsG0780041351.01.T01:CDS 60.0%
TTGAGGGGACTGGGGTGTGA+AGG + Chr7:89875054-89875073 MsG0780041351.01.T01:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - Chr7:89875921-89875940 None:intergenic 60.0%
! GGGGTTTAGGATTGGAGGGG+AGG + Chr7:89876232-89876251 MsG0780041351.01.T01:intron 60.0%
! GGTTTGAAGCAGCATGCCGC+TGG + Chr7:89873458-89873477 MsG0780041351.01.T01:CDS 60.0%
AAGCAGCATGCCGCTGGTGG+AGG + Chr7:89873464-89873483 MsG0780041351.01.T01:CDS 65.0%
CATGCCGCTGGTGGAGGAAG+AGG + Chr7:89873470-89873489 MsG0780041351.01.T01:CDS 65.0%
CGCATATGCAGGGTCCGGGA+AGG + Chr7:89875904-89875923 MsG0780041351.01.T01:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + Chr7:89875919-89875938 MsG0780041351.01.T01:intron 65.0%
CGGGAGGGTTCCCACATGCT+TGG + Chr7:89876143-89876162 MsG0780041351.01.T01:intron 65.0%
CTCCCGCATATGCAGGGTCC+GGG + Chr7:89875900-89875919 MsG0780041351.01.T01:intron 65.0%
GAGGGAAGGGGAGGGCTTTG+GGG - Chr7:89876488-89876507 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + Chr7:89875899-89875918 MsG0780041351.01.T01:intron 65.0%
GCTGGTGGAGGAAGAGGTGG+TGG + Chr7:89873476-89873495 MsG0780041351.01.T01:CDS 65.0%
GGAGGGAAGGGGAGGGCTTT+GGG - Chr7:89876489-89876508 None:intergenic 65.0%
TGGAGGGAAGGGGAGGGCTT+TGG - Chr7:89876490-89876509 None:intergenic 65.0%
! AGGGAAGGGGAGGGCTTTGG+GGG - Chr7:89876487-89876506 None:intergenic 65.0%
!! AGGGGAGGGCTTTGGGGGAT+TGG - Chr7:89876482-89876501 None:intergenic 65.0%
GCCGCTGGTGGAGGAAGAGG+TGG + Chr7:89873473-89873492 MsG0780041351.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 89872602 89878399 89872602 ID=MsG0780041351.01;Name=MsG0780041351.01
Chr7 mRNA 89872602 89878399 89872602 ID=MsG0780041351.01.T01;Parent=MsG0780041351.01;Name=MsG0780041351.01.T01;_AED=0.37;_eAED=0.45;_QI=0|1|0.88|1|1|1|9|335|408
Chr7 exon 89872602 89873013 89872602 ID=MsG0780041351.01.T01:exon:20712;Parent=MsG0780041351.01.T01
Chr7 exon 89873399 89873525 89873399 ID=MsG0780041351.01.T01:exon:20713;Parent=MsG0780041351.01.T01
Chr7 exon 89873974 89874088 89873974 ID=MsG0780041351.01.T01:exon:20714;Parent=MsG0780041351.01.T01
Chr7 exon 89874728 89874844 89874728 ID=MsG0780041351.01.T01:exon:20715;Parent=MsG0780041351.01.T01
Chr7 exon 89875146 89875232 89875146 ID=MsG0780041351.01.T01:exon:20716;Parent=MsG0780041351.01.T01
Chr7 exon 89877280 89877339 89877280 ID=MsG0780041351.01.T01:exon:20717;Parent=MsG0780041351.01.T01
Chr7 exon 89877433 89877510 89877433 ID=MsG0780041351.01.T01:exon:20718;Parent=MsG0780041351.01.T01
Chr7 exon 89877736 89877807 89877736 ID=MsG0780041351.01.T01:exon:20719;Parent=MsG0780041351.01.T01
Chr7 exon 89877906 89878399 89877906 ID=MsG0780041351.01.T01:exon:20720;Parent=MsG0780041351.01.T01
Chr7 CDS 89872602 89873013 89872602 ID=MsG0780041351.01.T01:cds;Parent=MsG0780041351.01.T01
Chr7 CDS 89873399 89873525 89873399 ID=MsG0780041351.01.T01:cds;Parent=MsG0780041351.01.T01
Chr7 CDS 89873974 89874088 89873974 ID=MsG0780041351.01.T01:cds;Parent=MsG0780041351.01.T01
Chr7 CDS 89874728 89874844 89874728 ID=MsG0780041351.01.T01:cds;Parent=MsG0780041351.01.T01
Chr7 CDS 89875146 89875232 89875146 ID=MsG0780041351.01.T01:cds;Parent=MsG0780041351.01.T01
Chr7 CDS 89877280 89877339 89877280 ID=MsG0780041351.01.T01:cds;Parent=MsG0780041351.01.T01
Chr7 CDS 89877433 89877510 89877433 ID=MsG0780041351.01.T01:cds;Parent=MsG0780041351.01.T01
Chr7 CDS 89877736 89877807 89877736 ID=MsG0780041351.01.T01:cds;Parent=MsG0780041351.01.T01
Chr7 CDS 89877906 89878064 89877906 ID=MsG0780041351.01.T01:cds;Parent=MsG0780041351.01.T01
Chr7 three_prime_UTR 89878065 89878399 89878065 ID=MsG0780041351.01.T01:three_prime_utr;Parent=MsG0780041351.01.T01
Gene Sequence

>MsG0780041351.01.T01

TTGATACGCGCATTTGATTTTTTGATCCCAAACCCTAATTCCCAAATTCTAATTCCAATCACATCGAAATCCCTGAGATTGCGTTTCGGAGAGATCCGAATCTTCAATGGCGCATCAAAGAGCCAAATTGTTGTTCCTTCTCTGTGCTCTATGCTATTCTCTCAGCGCCATTGCCGTGTAATTTTTCTGTTTTCCTTTTATTACCGTTTCTCGAAAATGTTGTTGATTCTACATTTGCTTATAAATCTATGTTTGGTATGCAGAAAGAGTTATTACGATATACTTCAAGTGTCGAAAGGTGCATCGGATGATCAGATTAAGAGAGCGTATAGAAAGCTTGCATTGAAGTATCATCCTGATAAGAATCCGGGAAATGAAGAAGCTAATAAGAAATTTGCGGAGATTAGCAATGCATATGAGGTATTGTCGGATAACGAGAAGAGAAATATTTATGATAAGTATGGTGAAGAGGGTTTGAAGCAGCATGCCGCTGGTGGAGGAAGAGGTGGTGGAATGAACATGCAGGATATTTTTAACTCTTTCTTTGGCGGGGGATCAATGGAGGAAGAAGAAGAGAAAATTGCGAAAGGCGACGACGTTATTGTTGATTTGGATGCAACCCTTGAAGATTTGTATATGGGTGGTTCCTTGAAGGTTTGGAGGGAGAAAAATGTTGTAAAGCCAGCTCCTGGAAAAAGACGCTGTAACTGTAGAAATGAGGTTTATCACAGGCAAATTGGGCCTGGAATGTTTCAACAAATGACAGAGCAGGTCTGTGATCAATGTGCTAATGTCAAATACGTAAGGGAGGGATATTTCGTCACTGTTGATATTGAGAAAGGCATGAAAGATGGCCAGGAGGTGCTATTTTATGAGGACGGCGAGCCCATAATTGATGGAGAATCTGGAGATTTAAGGTTTCGTATCCGCACAGCACCTCATGAACTTTTCAAAAGGGAAGGCAATGACTTACACACGACTGTCACTATCACGCTGGTTCAAGCTCTTGTTGGTTTTGAGAAGACCGTTAAACACCTTGATGAACATTTGGTAGACATAAGCTCGAAGGGAATCACAAATCCAAAGCAAGTAAGGAAGTTCAAAGGGGAGGGTATGCCATTGCATATGAGCACAAAGAAAGGAGATCTTTACGTCACTTTTGAGGTTCTGTTCCCCACCTCACTATCGGAGGAACAGAAAACAAAAATAAAATCAATTCTTGGTTAG
Protein sequence

>MsG0780041351.01.T01

LIRAFDFLIPNPNSQILIPITSKSLRLRFGEIRIFNGASKSQIVVPSLCSMLFSQRHCRVIFLFSFYYRFSKMLLILHLLINLCLVCRKSYYDILQVSKGASDDQIKRAYRKLALKYHPDKNPGNEEANKKFAEISNAYEVLSDNEKRNIYDKYGEEGLKQHAAGGGRGGGMNMQDIFNSFFGGGSMEEEEEKIAKGDDVIVDLDATLEDLYMGGSLKVWREKNVVKPAPGKRRCNCRNEVYHRQIGPGMFQQMTEQVCDQCANVKYVREGYFVTVDIEKGMKDGQEVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTVKHLDEHLVDISSKGITNPKQVRKFKGEGMPLHMSTKKGDLYVTFEVLFPTSLSEEQKTKIKSILG*