Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000047.01.T01 | XP_003589505.1 | 99.372 | 796 | 5 | 0 | 7 | 802 | 23 | 818 | 0 | 1599 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000047.01.T01 | P35016 | 83.689 | 797 | 127 | 2 | 7 | 802 | 23 | 817 | 0 | 1278 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000047.01.T01 | G7I7Q4 | 99.372 | 796 | 5 | 0 | 7 | 802 | 23 | 818 | 0.0 | 1599 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048784.01 | MsG0180000047.01 | 0.813020 | 3.162159e-51 | 2.041664e-48 |
MsG0080048952.01 | MsG0180000047.01 | 0.812327 | 4.482776e-51 | 2.841826e-48 |
MsG0180000047.01 | MsG0180000091.01 | 0.819854 | 9.330402e-53 | 7.263993e-50 |
MsG0180000047.01 | MsG0180000650.01 | 0.801856 | 7.391151e-49 | 3.567362e-46 |
MsG0180000047.01 | MsG0180000653.01 | 0.841966 | 3.448448e-58 | 5.151161e-55 |
MsG0180000047.01 | MsG0180000822.01 | 0.802487 | 5.480622e-49 | 2.687987e-46 |
MsG0180000047.01 | MsG0180001173.01 | 0.802081 | 6.643201e-49 | 3.224707e-46 |
MsG0180000047.01 | MsG0180002100.01 | 0.800797 | 1.217636e-48 | 5.721472e-46 |
MsG0180000047.01 | MsG0180002952.01 | 0.801803 | 7.578221e-49 | 3.652626e-46 |
MsG0180000047.01 | MsG0180004128.01 | 0.802659 | 5.050178e-49 | 2.487734e-46 |
MsG0180000047.01 | MsG0180004463.01 | 0.811282 | 7.569645e-51 | 4.666179e-48 |
MsG0180000047.01 | MsG0180004765.01 | 0.846430 | 2.182620e-59 | 3.756232e-56 |
MsG0180000047.01 | MsG0180005153.01 | 0.809183 | 2.145653e-50 | 1.251271e-47 |
MsG0180000047.01 | MsG0180005763.01 | 0.830910 | 2.249971e-55 | 2.403836e-52 |
MsG0180000047.01 | MsG0280006302.01 | -0.807428 | 5.079911e-50 | 2.828704e-47 |
MsG0180000047.01 | MsG0280006865.01 | 0.806930 | 6.475875e-50 | 3.559646e-47 |
MsG0180000047.01 | MsG0280007529.01 | 0.815307 | 9.888184e-52 | 6.792713e-49 |
MsG0180000047.01 | MsG0280007547.01 | 0.848296 | 6.710332e-60 | 1.225854e-56 |
MsG0180000047.01 | MsG0280007564.01 | 0.812896 | 3.365392e-51 | 2.165726e-48 |
MsG0180000047.01 | MsG0280007764.01 | 0.802101 | 6.581329e-49 | 3.196250e-46 |
MsG0180000047.01 | MsG0280008073.01 | 0.840363 | 9.099142e-58 | 1.293066e-54 |
MsG0180000047.01 | MsG0280009165.01 | 0.841134 | 5.711292e-58 | 8.312659e-55 |
MsG0180000047.01 | MsG0280010170.01 | 0.861311 | 1.121522e-63 | 3.160156e-60 |
MsG0180000047.01 | MsG0280010287.01 | 0.822558 | 2.221909e-53 | 1.866234e-50 |
MsG0180000047.01 | MsG0280010778.01 | 0.820772 | 5.749342e-53 | 4.591479e-50 |
MsG0180000047.01 | MsG0280011201.01 | 0.823560 | 1.296996e-53 | 1.120587e-50 |
MsG0180000047.01 | MsG0280011293.01 | 0.810230 | 1.278097e-50 | 7.661870e-48 |
MsG0180000047.01 | MsG0280011336.01 | 0.853400 | 2.449589e-61 | 5.286325e-58 |
MsG0180000047.01 | MsG0380012034.01 | 0.840450 | 8.634868e-58 | 1.230456e-54 |
MsG0180000047.01 | MsG0380013176.01 | 0.814248 | 1.696987e-51 | 1.132820e-48 |
MsG0180000047.01 | MsG0380014126.01 | 0.834073 | 3.700319e-56 | 4.343308e-53 |
MsG0180000047.01 | MsG0380014489.01 | 0.800018 | 1.754302e-48 | 8.081847e-46 |
MsG0180000047.01 | MsG0380014778.01 | 0.847236 | 1.314160e-59 | 2.320724e-56 |
MsG0180000047.01 | MsG0380015220.01 | 0.801345 | 9.409146e-49 | 4.482954e-46 |
MsG0180000047.01 | MsG0380015992.01 | 0.902842 | 6.410653e-79 | 9.250984e-75 |
MsG0180000047.01 | MsG0380016859.01 | 0.806891 | 6.598953e-50 | 3.623628e-47 |
MsG0180000047.01 | MsG0380016909.01 | 0.834296 | 3.253977e-56 | 3.845326e-53 |
MsG0180000047.01 | MsG0380016910.01 | 0.815158 | 1.066736e-51 | 7.298000e-49 |
MsG0180000047.01 | MsG0380018075.01 | 0.813549 | 2.420020e-51 | 1.585192e-48 |
MsG0180000047.01 | MsG0480018251.01 | 0.868214 | 7.709459e-66 | 2.766468e-62 |
MsG0180000047.01 | MsG0480018640.01 | 0.829512 | 4.937816e-55 | 5.064525e-52 |
MsG0180000047.01 | MsG0480019034.01 | 0.802903 | 4.499060e-49 | 2.230143e-46 |
MsG0180000047.01 | MsG0480019795.01 | 0.813185 | 2.909317e-51 | 1.886718e-48 |
MsG0180000047.01 | MsG0480020739.01 | 0.806994 | 6.276010e-50 | 3.455459e-47 |
MsG0180000047.01 | MsG0480021061.01 | 0.803554 | 3.298664e-49 | 1.662692e-46 |
MsG0180000047.01 | MsG0480022343.01 | 0.803142 | 4.014657e-49 | 2.002126e-46 |
MsG0180000047.01 | MsG0480023221.01 | 0.804361 | 2.241201e-49 | 1.153302e-46 |
MsG0180000047.01 | MsG0480023258.01 | 0.809267 | 2.059356e-50 | 1.203597e-47 |
MsG0180000047.01 | MsG0480023412.01 | 0.809500 | 1.835440e-50 | 1.079401e-47 |
MsG0180000047.01 | MsG0480023463.01 | 0.819933 | 8.952836e-53 | 6.985582e-50 |
MsG0180000047.01 | MsG0480023636.01 | 0.825924 | 3.594628e-54 | 3.322312e-51 |
MsG0180000047.01 | MsG0480023720.01 | 0.818014 | 2.445416e-52 | 1.809163e-49 |
MsG0180000047.01 | MsG0480023725.01 | 0.801066 | 1.072788e-48 | 5.075619e-46 |
MsG0180000047.01 | MsG0480023873.01 | 0.821259 | 4.440062e-53 | 3.594092e-50 |
MsG0180000047.01 | MsG0580025969.01 | 0.812724 | 3.671735e-51 | 2.352239e-48 |
MsG0180000047.01 | MsG0580027441.01 | 0.805656 | 1.201476e-49 | 6.392270e-47 |
MsG0180000047.01 | MsG0580029008.01 | 0.821706 | 3.501264e-53 | 2.870091e-50 |
MsG0180000047.01 | MsG0580029370.01 | 0.832033 | 1.190958e-55 | 1.315364e-52 |
MsG0180000047.01 | MsG0580029371.01 | 0.844694 | 6.451443e-59 | 1.049916e-55 |
MsG0180000047.01 | MsG0580030204.01 | 0.840881 | 6.654657e-58 | 9.610707e-55 |
MsG0180000047.01 | MsG0680030303.01 | 0.844158 | 8.987499e-59 | 1.438315e-55 |
MsG0180000047.01 | MsG0680030880.01 | 0.802209 | 6.253831e-49 | 3.045519e-46 |
MsG0180000047.01 | MsG0680031720.01 | 0.821218 | 4.538966e-53 | 3.670397e-50 |
MsG0180000047.01 | MsG0680034842.01 | 0.805095 | 1.574807e-49 | 8.258430e-47 |
MsG0180000047.01 | MsG0680035580.01 | 0.829562 | 4.802292e-55 | 4.932630e-52 |
MsG0180000047.01 | MsG0680035844.01 | 0.806379 | 8.466306e-50 | 4.588252e-47 |
MsG0180000047.01 | MsG0780038401.01 | 0.885305 | 9.117701e-72 | 6.226171e-68 |
MsG0180000047.01 | MsG0780040856.01 | 0.802102 | 6.580114e-49 | 3.195710e-46 |
MsG0180000047.01 | MsG0780040920.01 | 0.850749 | 1.388182e-60 | 2.747034e-57 |
MsG0180000047.01 | MsG0780041305.01 | 0.842685 | 2.223528e-58 | 3.397316e-55 |
MsG0180000047.01 | MsG0780041351.01 | 0.956705 | 1.568795e-114 | 5.182264e-109 |
MsG0180000047.01 | MsG0780041435.01 | 0.817906 | 2.585476e-52 | 1.907139e-49 |
MsG0180000047.01 | MsG0780041475.01 | 0.840746 | 7.223748e-58 | 1.038834e-54 |
MsG0180000047.01 | MsG0880042053.01 | 0.806798 | 6.905185e-50 | 3.782642e-47 |
MsG0180000047.01 | MsG0880042107.01 | 0.818195 | 2.225049e-52 | 1.654367e-49 |
MsG0180000047.01 | MsG0880042276.01 | 0.811103 | 8.277909e-51 | 5.078984e-48 |
MsG0180000047.01 | MsG0880042745.01 | 0.864620 | 1.066836e-64 | 3.371615e-61 |
MsG0180000047.01 | MsG0880042760.01 | 0.806534 | 7.852774e-50 | 4.272671e-47 |
MsG0180000047.01 | MsG0880043253.01 | 0.830811 | 2.379989e-55 | 2.535219e-52 |
MsG0180000047.01 | MsG0880043479.01 | 0.803235 | 3.841091e-49 | 1.920133e-46 |
MsG0180000047.01 | MsG0880043480.01 | 0.822031 | 2.944066e-53 | 2.435601e-50 |
MsG0180000047.01 | MsG0880043616.01 | 0.802702 | 4.948469e-49 | 2.440416e-46 |
MsG0180000047.01 | MsG0880043748.01 | 0.810823 | 9.515319e-51 | 5.795096e-48 |
MsG0180000047.01 | MsG0880043750.01 | 0.803459 | 3.450850e-49 | 1.735079e-46 |
MsG0180000047.01 | MsG0880044565.01 | 0.819894 | 9.138798e-53 | 7.122801e-50 |
MsG0180000047.01 | MsG0880045294.01 | 0.806429 | 8.261597e-50 | 4.483187e-47 |
MsG0180000047.01 | MsG0880045765.01 | 0.808251 | 3.394936e-50 | 1.931720e-47 |
MsG0180000047.01 | MsG0880046122.01 | 0.804502 | 2.094751e-49 | 1.081786e-46 |
MsG0180000047.01 | MsG0880047143.01 | 0.808400 | 3.154916e-50 | 1.802193e-47 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0180001086.01 | MsG0180000047.01 | PPI |
MsG0680032925.01 | MsG0180000047.01 | PPI |
MsG0680032925.01 | MsG0180000047.01 | PPI |
MsG0580026921.01 | MsG0180000047.01 | PPI |
MsG0580030003.01 | MsG0180000047.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000047.01.T01 | MTR_1g025430 | 99.372 | 796 | 5 | 0 | 7 | 802 | 23 | 818 | 0.0 | 1599 |
MsG0180000047.01.T01 | MTR_6g452990 | 49.508 | 711 | 317 | 7 | 59 | 764 | 2 | 675 | 0.0 | 646 |
MsG0180000047.01.T01 | MTR_1g099840 | 47.743 | 731 | 327 | 9 | 59 | 783 | 7 | 688 | 0.0 | 634 |
MsG0180000047.01.T01 | MTR_5g096430 | 48.718 | 702 | 319 | 8 | 62 | 759 | 5 | 669 | 0.0 | 618 |
MsG0180000047.01.T01 | MTR_5g096460 | 48.718 | 702 | 319 | 8 | 62 | 759 | 5 | 669 | 0.0 | 618 |
MsG0180000047.01.T01 | MTR_5g097320 | 46.164 | 743 | 345 | 15 | 61 | 788 | 89 | 791 | 0.0 | 597 |
MsG0180000047.01.T01 | MTR_0009s0390 | 44.912 | 737 | 352 | 15 | 60 | 785 | 80 | 773 | 0.0 | 589 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000047.01.T01 | AT4G24190 | 83.752 | 757 | 118 | 3 | 7 | 762 | 23 | 775 | 0.0 | 1241 |
MsG0180000047.01.T01 | AT4G24190 | 83.752 | 757 | 118 | 3 | 7 | 762 | 23 | 775 | 0.0 | 1240 |
MsG0180000047.01.T01 | AT5G52640 | 49.041 | 730 | 330 | 8 | 59 | 783 | 2 | 694 | 0.0 | 649 |
MsG0180000047.01.T01 | AT5G56000 | 47.765 | 716 | 333 | 7 | 59 | 770 | 2 | 680 | 0.0 | 627 |
MsG0180000047.01.T01 | AT5G56010 | 47.943 | 705 | 326 | 7 | 59 | 759 | 2 | 669 | 0.0 | 617 |
MsG0180000047.01.T01 | AT5G56030 | 47.943 | 705 | 326 | 7 | 59 | 759 | 2 | 669 | 0.0 | 615 |
MsG0180000047.01.T01 | AT3G07770 | 47.525 | 707 | 321 | 13 | 61 | 757 | 94 | 760 | 0.0 | 611 |
MsG0180000047.01.T01 | AT3G07770 | 47.525 | 707 | 321 | 13 | 61 | 757 | 94 | 760 | 0.0 | 611 |
MsG0180000047.01.T01 | AT3G07770 | 47.525 | 707 | 321 | 13 | 61 | 757 | 94 | 760 | 0.0 | 611 |
MsG0180000047.01.T01 | AT5G56030 | 46.049 | 734 | 326 | 8 | 59 | 759 | 2 | 698 | 0.0 | 601 |
MsG0180000047.01.T01 | AT2G04030 | 45.200 | 750 | 338 | 17 | 59 | 783 | 74 | 775 | 0.0 | 601 |
MsG0180000047.01.T01 | AT2G04030 | 45.067 | 750 | 336 | 17 | 59 | 783 | 74 | 772 | 0.0 | 597 |
Find 181 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGGATTTGGTAAAGAATT+TGG | 0.100722 | 1:+795791 | MsG0180000047.01.T01:CDS |
CCTCACTGATAAAGACATTT+TGG | 0.132107 | 1:+795329 | MsG0180000047.01.T01:CDS |
CTCAATCTAATTGGGCAATT+TGG | 0.152816 | 1:+795963 | MsG0180000047.01.T01:CDS |
CTCAATGATACCAAGTTTAA+TGG | 0.159199 | 1:-798123 | None:intergenic |
GACCCTCCTTGGACACATTT+TGG | 0.171757 | 1:-798615 | None:intergenic |
TTAACTTCCCTATCTATATC+TGG | 0.204471 | 1:+796923 | MsG0180000047.01.T01:CDS |
AGCTGAAGTTTCAAGGCTTA+TGG | 0.218402 | 1:+794804 | MsG0180000047.01.T01:CDS |
AGTGGTGATCTCAATCTAAT+TGG | 0.239122 | 1:+795954 | MsG0180000047.01.T01:CDS |
TAAATGAAAATTTGTTTGTT+AGG | 0.255395 | 1:+794507 | None:intergenic |
TTCATCTTCACTTTCCTCCT+TGG | 0.262279 | 1:-797152 | None:intergenic |
TCATCTTCACTTTCCTCCTT+GGG | 0.274450 | 1:-797151 | None:intergenic |
TGTCGGTTGCAGTTATTTCT+TGG | 0.277555 | 1:+799338 | MsG0180000047.01.T01:three_prime_UTR |
TCTTCCTCTGTAACCTCCTT+TGG | 0.284101 | 1:-797286 | None:intergenic |
GAGGATTTGGTAAAGAATTT+GGG | 0.292920 | 1:+795792 | MsG0180000047.01.T01:CDS |
CAATTCACTTTACAGTAATA+AGG | 0.298653 | 1:+794837 | MsG0180000047.01.T01:CDS |
ACCAAGTTCTGGAATGAGTT+TGG | 0.314376 | 1:+798095 | MsG0180000047.01.T01:CDS |
TTGCTTCCCCAGATATAGAT+AGG | 0.331375 | 1:-796931 | None:intergenic |
TGCATCAAGTATTCATCAAC+TGG | 0.336633 | 1:-798562 | None:intergenic |
ACGGATGGGTCCTTTAACTT+AGG | 0.348209 | 1:-799411 | None:intergenic |
CCACTTAGTTAGATCCTTGA+AGG | 0.361563 | 1:-798680 | None:intergenic |
TGGTATGACAAAGGAGGATT+TGG | 0.366719 | 1:+795779 | MsG0180000047.01.T01:CDS |
ATCTGACTTTCAGGTATGTA+TGG | 0.368320 | 1:+796148 | MsG0180000047.01.T01:intron |
CCCGAGTTTCAGACCCTCCT+TGG | 0.369926 | 1:-798626 | None:intergenic |
CTCGTCTAACATACAACTTC+AGG | 0.373088 | 1:-797572 | None:intergenic |
GTAGTGGTGACATCAAAATT+TGG | 0.373244 | 1:+798775 | MsG0180000047.01.T01:CDS |
TGTAGGCATTGGACAAGATT+AGG | 0.378748 | 1:+795298 | MsG0180000047.01.T01:intron |
GAGGTCAATACACCAAGTTC+TGG | 0.382290 | 1:+798084 | MsG0180000047.01.T01:CDS |
TCTTTGTCAGTGGACTCGTC+AGG | 0.385604 | 1:-797881 | None:intergenic |
TAAATGATGTGAAGGCTATA+TGG | 0.388507 | 1:+797254 | MsG0180000047.01.T01:CDS |
TCCAAACTCATTCCAGAACT+TGG | 0.392555 | 1:-798096 | None:intergenic |
TACAAGTCCTGAGGTGCTTT+AGG | 0.402740 | 1:-797519 | None:intergenic |
AGTTTCAAGCTGAAGTTTCA+AGG | 0.404580 | 1:+794797 | MsG0180000047.01.T01:CDS |
TTGGGTACCATAGCAAAATC+TGG | 0.405084 | 1:+795810 | MsG0180000047.01.T01:CDS |
TCCCGGAGTTCCTTGATGAT+AGG | 0.409122 | 1:-798904 | None:intergenic |
GTGATGACAAACCTTTATCA+TGG | 0.420287 | 1:+797442 | MsG0180000047.01.T01:CDS |
GGTCCTCTTCGGCAAGCTTA+CGG | 0.422206 | 1:-797859 | None:intergenic |
ACTCGCTGGCCTCTTCTTTG+AGG | 0.426467 | 1:-796254 | None:intergenic |
GTAAAGTGGCTCCATGATAA+AGG | 0.427105 | 1:-797453 | None:intergenic |
GTGCTTTAGGTGGCACATAA+AGG | 0.430754 | 1:-797506 | None:intergenic |
TGGAACCAGCAAAGAACAAC+TGG | 0.432951 | 1:+798373 | MsG0180000047.01.T01:CDS |
TCCTCCTCAACTGTTGCATC+AGG | 0.444473 | 1:-799175 | None:intergenic |
TCTTATCTTCATAATCCATC+AGG | 0.444687 | 1:-798588 | None:intergenic |
TCTATTAGAGACAGAGGTAT+TGG | 0.445475 | 1:+795759 | MsG0180000047.01.T01:CDS |
ATAGCAAAATCTGGAACTTC+AGG | 0.446829 | 1:+795819 | MsG0180000047.01.T01:CDS |
CAACGCCAAGCTTGAAATCC+AGG | 0.454983 | 1:+795362 | MsG0180000047.01.T01:CDS |
TAAATGTTGGTTACCATTCG+AGG | 0.460254 | 1:-799601 | None:intergenic |
TAACTTCCCTATCTATATCT+GGG | 0.461417 | 1:+796924 | MsG0180000047.01.T01:CDS |
ATTTCTCGTGATACATTCAA+TGG | 0.461649 | 1:-797770 | None:intergenic |
AAAACTGATCATTTATAAAG+TGG | 0.464737 | 1:-799538 | None:intergenic |
CCAAGGAGGGTCTGAAACTC+GGG | 0.464941 | 1:+798626 | MsG0180000047.01.T01:CDS |
GCGAAGGGATCTCTTCGAAA+TGG | 0.469049 | 1:-794755 | None:intergenic |
TTCTAAAGACAAGGAACTAA+AGG | 0.470485 | 1:+798654 | MsG0180000047.01.T01:CDS |
ACAAACCTGGATTTCAAGCT+TGG | 0.470570 | 1:-795367 | None:intergenic |
TACCTCTGTCTCTAATAGAT+AGG | 0.475363 | 1:-795755 | None:intergenic |
TCCAAGGAGGGTCTGAAACT+CGG | 0.480470 | 1:+798625 | MsG0180000047.01.T01:CDS |
CTAATTGGGCAATTTGGAGT+TGG | 0.481464 | 1:+795969 | MsG0180000047.01.T01:CDS |
AATTCTAGAAGCAAAATCCT+TGG | 0.482964 | 1:-799119 | None:intergenic |
GGAACTAAAGGAATCCTTCA+AGG | 0.484459 | 1:+798666 | MsG0180000047.01.T01:CDS |
CCCGGAGTTCCTTGATGATA+GGG | 0.484538 | 1:-798903 | None:intergenic |
TTTGGAAAATCCATTAAACT+TGG | 0.485636 | 1:+798113 | MsG0180000047.01.T01:CDS |
CCTCTTGACAACATCTGAAT+CGG | 0.488306 | 1:-794628 | None:intergenic |
TTGCAATTTCAGAAGATACA+TGG | 0.492822 | 1:+796193 | MsG0180000047.01.T01:CDS |
AGGAAACTAAAACTCATGAC+AGG | 0.498240 | 1:-799391 | None:intergenic |
CATCTTCACTTTCCTCCTTG+GGG | 0.498254 | 1:-797150 | None:intergenic |
CAAGCTTACGGATCATATCA+AGG | 0.500174 | 1:-797847 | None:intergenic |
GTGGTGATCTCAATCTAATT+GGG | 0.500326 | 1:+795955 | MsG0180000047.01.T01:CDS |
CTTTGTCAGTGGACTCGTCA+GGG | 0.500986 | 1:-797880 | None:intergenic |
CTGATCATTTATAAAGTGGA+TGG | 0.504308 | 1:-799534 | None:intergenic |
TGTCTTTATCAGTGAGGGAT+AGG | 0.504588 | 1:-795323 | None:intergenic |
TTCTTCAGACGCTCAAGGAA+TGG | 0.506178 | 1:-798404 | None:intergenic |
CACAAGGAGTGTTATCCAAT+CGG | 0.507998 | 1:-798753 | None:intergenic |
ATTCTAGAAGCAAAATCCTT+GGG | 0.509254 | 1:-799118 | None:intergenic |
CGACGAGTCTTCTGAGGAAG+AGG | 0.516292 | 1:+796987 | MsG0180000047.01.T01:CDS |
TGGTGGATCTACTACTTCAT+CGG | 0.517594 | 1:-794562 | None:intergenic |
TCATCAGCTTCGTTTGAAGC+AGG | 0.518350 | 1:-799244 | None:intergenic |
GACTCGTCGTCTTCATCAGC+GGG | 0.518353 | 1:-796973 | None:intergenic |
ATTTGGTTGGAGTGCAAACA+TGG | 0.519357 | 1:+798792 | MsG0180000047.01.T01:CDS |
CACTTTCGAAAAGTGCAGTC+TGG | 0.519596 | 1:-799078 | None:intergenic |
TGATAAACGATTTCTGTTGG+TGG | 0.522059 | 1:-798150 | None:intergenic |
CATCGACATTGTCATTTGCA+AGG | 0.523230 | 1:-798714 | None:intergenic |
TACATATCTAGAATGAAAGC+TGG | 0.527032 | 1:+798326 | MsG0180000047.01.T01:CDS |
GGAAGATGAGACTGAAGTTG+AGG | 0.531983 | 1:+799195 | MsG0180000047.01.T01:CDS |
CCCTATCATCAAGGAACTCC+GGG | 0.533736 | 1:+798903 | MsG0180000047.01.T01:CDS |
CATTAAACTTGGTATCATTG+AGG | 0.534100 | 1:+798124 | MsG0180000047.01.T01:CDS |
TGTGCCACCTAAAGCACCTC+AGG | 0.535240 | 1:+797512 | MsG0180000047.01.T01:CDS |
TAAGGCAAAATTCCAACGGA+TGG | 0.535919 | 1:-799426 | None:intergenic |
GATGCAGATTAAGTTAGATA+AGG | 0.535990 | 1:+795722 | MsG0180000047.01.T01:intron |
CATCACCTTCAGCAGTAAAG+TGG | 0.538199 | 1:-797467 | None:intergenic |
GTATGGGAATCTAAAGCTGA+TGG | 0.541849 | 1:+796165 | MsG0180000047.01.T01:CDS |
ACCCTATCATCAAGGAACTC+CGG | 0.542750 | 1:+798902 | MsG0180000047.01.T01:CDS |
ATACTCTTCCACGTACTCGC+TGG | 0.546272 | 1:-796268 | None:intergenic |
GGATGAGAGTGTGAAGCAAA+CGG | 0.547097 | 1:+799042 | MsG0180000047.01.T01:intron |
AAGCATACATGCGCGGCAAG+AGG | 0.548258 | 1:+798857 | MsG0180000047.01.T01:CDS |
GGTTCTTAACTACTCTCTCC+CGG | 0.549376 | 1:-798921 | None:intergenic |
AAACTCGGTGCTGTTCCTCA+TGG | 0.549531 | 1:+794597 | MsG0180000047.01.T01:CDS |
TGGTGACATCAAAATTTGGT+TGG | 0.549849 | 1:+798779 | MsG0180000047.01.T01:CDS |
GGACTCGTCAGGGTCCTCTT+CGG | 0.550477 | 1:-797870 | None:intergenic |
ATCGACATTGTCATTTGCAA+GGG | 0.551505 | 1:-798713 | None:intergenic |
AGAAGAGGCCAGCGAGTACG+TGG | 0.552899 | 1:+796260 | MsG0180000047.01.T01:CDS |
CAAAATGTCTTTATCAGTGA+GGG | 0.554638 | 1:-795328 | None:intergenic |
GATCCGTAAGCTTGCCGAAG+AGG | 0.555543 | 1:+797856 | MsG0180000047.01.T01:CDS |
TGCTTCCCCAGATATAGATA+GGG | 0.556945 | 1:-796930 | None:intergenic |
AGCATACATGCGCGGCAAGA+GGG | 0.557652 | 1:+798858 | MsG0180000047.01.T01:CDS |
TTTCTTGTTGAATGATCCCA+AGG | 0.558398 | 1:+799102 | MsG0180000047.01.T01:CDS |
TGTGAAGATATCCAACCGAT+TGG | 0.558827 | 1:+798738 | MsG0180000047.01.T01:CDS |
AGGAGTGTTATCCAATCGGT+TGG | 0.561154 | 1:-798749 | None:intergenic |
TGTGTGTGAATGAAGGGAAT+CGG | 0.561471 | 1:+794729 | MsG0180000047.01.T01:intron |
TAGAATGAAAGCTGGACAGA+AGG | 0.562025 | 1:+798334 | MsG0180000047.01.T01:CDS |
GAAGTTCCAAAATGTGTCCA+AGG | 0.562529 | 1:+798609 | MsG0180000047.01.T01:CDS |
TCCACTGACAAAGAAAAGAA+AGG | 0.563357 | 1:+797890 | MsG0180000047.01.T01:CDS |
TGGAGCCACTTTACTGCTGA+AGG | 0.565774 | 1:+797462 | MsG0180000047.01.T01:CDS |
TAAAATACACCTCAAAGAAG+AGG | 0.565903 | 1:+796245 | MsG0180000047.01.T01:CDS |
TGTCAATTTACCCTCAGACT+TGG | 0.566708 | 1:-798291 | None:intergenic |
TCCTTGATGATAGGGTGTCT+AGG | 0.566886 | 1:-798895 | None:intergenic |
AAGTTAAAGGACCCATCCGT+TGG | 0.569335 | 1:+799414 | MsG0180000047.01.T01:three_prime_UTR |
CGGGAAGGATTCTAAAGACA+AGG | 0.569516 | 1:+798645 | MsG0180000047.01.T01:CDS |
TATTTACAGCACCAAGTCTG+AGG | 0.569728 | 1:+798280 | MsG0180000047.01.T01:intron |
TCCTAGACACCCTATCATCA+AGG | 0.573259 | 1:+798894 | MsG0180000047.01.T01:CDS |
TCTAACATACAACTTCAGGT+TGG | 0.576509 | 1:-797568 | None:intergenic |
ACTTCTCCGCATTACTGCGA+AGG | 0.578324 | 1:-794771 | None:intergenic |
ATCTCTGTTCCACGTCCTAG+TGG | 0.579957 | 1:-796222 | None:intergenic |
TGCTTCAAACGAAGCTGATG+AGG | 0.581857 | 1:+799246 | MsG0180000047.01.T01:CDS |
TAAGACTAATGACTGTGCTA+AGG | 0.581922 | 1:-799444 | None:intergenic |
AGTAGTAGATCCACCAAAGG+TGG | 0.582933 | 1:+794569 | MsG0180000047.01.T01:CDS |
GGAACTCTTAAATGATGTGA+AGG | 0.585981 | 1:+797246 | MsG0180000047.01.T01:CDS |
TCCTGATGCAACAGTTGAGG+AGG | 0.586304 | 1:+799174 | MsG0180000047.01.T01:CDS |
CAGTCCTGATGCAACAGTTG+AGG | 0.589745 | 1:+799171 | MsG0180000047.01.T01:CDS |
TCTGACTTTCAGGTATGTAT+GGG | 0.590095 | 1:+796149 | MsG0180000047.01.T01:intron |
TCAAGGATCTAACTAAGTGG+TGG | 0.593513 | 1:+798683 | MsG0180000047.01.T01:CDS |
AAGGCAAAATTCCAACGGAT+GGG | 0.594736 | 1:-799425 | None:intergenic |
CTTCTCCGCATTACTGCGAA+GGG | 0.594891 | 1:-794770 | None:intergenic |
ATTCTACCACTCTCTTGCCA+AGG | 0.602333 | 1:+797318 | MsG0180000047.01.T01:CDS |
TTCCAAAATGTGTCCAAGGA+GGG | 0.604051 | 1:+798613 | MsG0180000047.01.T01:CDS |
CAGAGGTATTGGTATGACAA+AGG | 0.604095 | 1:+795770 | MsG0180000047.01.T01:CDS |
AAATTTCAAGCGAATGCGGA+AGG | 0.606036 | 1:+794534 | MsG0180000047.01.T01:CDS |
AGACTCGTCGTCTTCATCAG+CGG | 0.606434 | 1:-796974 | None:intergenic |
TTTGATGTCACCACTACACA+AGG | 0.606525 | 1:-798769 | None:intergenic |
GGGAAGCAAAGAGGTTGATG+TGG | 0.608554 | 1:+796945 | MsG0180000047.01.T01:CDS |
TGAAGACGACGAGTCTTCTG+AGG | 0.608975 | 1:+796981 | MsG0180000047.01.T01:CDS |
AAATGACGATGGTGATGTCA+AGG | 0.609943 | 1:+799270 | MsG0180000047.01.T01:CDS |
AAGCAAAGAGGTTGATGTGG+AGG | 0.610301 | 1:+796948 | MsG0180000047.01.T01:CDS |
ATACTTGATGCAATACCTGA+TGG | 0.612459 | 1:+798573 | MsG0180000047.01.T01:CDS |
GCCTAAAACAAAGACAGTGA+AGG | 0.613840 | 1:+797207 | MsG0180000047.01.T01:CDS |
CCTTCAAGGATCTAACTAAG+TGG | 0.614149 | 1:+798680 | MsG0180000047.01.T01:CDS |
ATTTACAGCACCAAGTCTGA+GGG | 0.614924 | 1:+798281 | MsG0180000047.01.T01:intron |
GAATCCAAAGGAGGTTACAG+AGG | 0.616769 | 1:+797282 | MsG0180000047.01.T01:CDS |
GAGATCCCTTCGCAGTAATG+CGG | 0.618086 | 1:+794765 | MsG0180000047.01.T01:CDS |
AACTTCCCTATCTATATCTG+GGG | 0.620396 | 1:+796925 | MsG0180000047.01.T01:CDS |
ATCCTATCTATTAGAGACAG+AGG | 0.620781 | 1:+795753 | MsG0180000047.01.T01:CDS |
CCGATTCAGATGTTGTCAAG+AGG | 0.623522 | 1:+794628 | MsG0180000047.01.T01:CDS |
AAGCTTACGGATCATATCAA+GGG | 0.627367 | 1:-797846 | None:intergenic |
TGGAATGAACCACTAGGACG+TGG | 0.627795 | 1:+796213 | MsG0180000047.01.T01:CDS |
TCTCTTCTCATCAACATCAG+AGG | 0.630151 | 1:-798063 | None:intergenic |
CTATATCTGGGGAAGCAAAG+AGG | 0.633804 | 1:+796936 | MsG0180000047.01.T01:CDS |
ATGTGAAGGCTATATGGCTG+AGG | 0.634531 | 1:+797260 | MsG0180000047.01.T01:CDS |
GTTGAGAAAATGCAGACAAG+TGG | 0.638859 | 1:+795936 | MsG0180000047.01.T01:CDS |
AAGTCCTGAGGTGCTTTAGG+TGG | 0.640658 | 1:-797516 | None:intergenic |
TCAATCAGCTGAAAGCCCCA+AGG | 0.640725 | 1:+797135 | MsG0180000047.01.T01:intron |
TCTGATGTTGATGAGAAGAG+AGG | 0.646244 | 1:+798065 | MsG0180000047.01.T01:CDS |
ATATTACCTTGGCAAGAGAG+TGG | 0.647445 | 1:-797324 | None:intergenic |
CCAAAATGTCTTTATCAGTG+AGG | 0.650976 | 1:-795329 | None:intergenic |
GTGCTAAGGCAAAATTCCAA+CGG | 0.652675 | 1:-799430 | None:intergenic |
GCATCAAGTATTCATCAACT+GGG | 0.657313 | 1:-798561 | None:intergenic |
TGAAGGAAACGACTTACGAG+TGG | 0.661856 | 1:+797224 | MsG0180000047.01.T01:CDS |
GTTCCAAAATGTGTCCAAGG+AGG | 0.663752 | 1:+798612 | MsG0180000047.01.T01:CDS |
GAAGGAAACGACTTACGAGT+GGG | 0.669364 | 1:+797225 | MsG0180000047.01.T01:CDS |
AGGTATTGGTATGACAAAGG+AGG | 0.676241 | 1:+795773 | MsG0180000047.01.T01:CDS |
GGAAACTAAAACTCATGACA+GGG | 0.676935 | 1:-799390 | None:intergenic |
GGATAACACTCCTTGTGTAG+TGG | 0.678484 | 1:+798759 | MsG0180000047.01.T01:CDS |
GCAAAGTGTCAGAATCAACA+AGG | 0.678755 | 1:-797748 | None:intergenic |
GGAGGGTCTGAAACTCGGGA+AGG | 0.685274 | 1:+798630 | MsG0180000047.01.T01:CDS |
GATACATGGAATGAACCACT+AGG | 0.687380 | 1:+796207 | MsG0180000047.01.T01:CDS |
TAACTCTCGTACAAGTCCTG+AGG | 0.691370 | 1:-797528 | None:intergenic |
TGAAGTAGTAGATCCACCAA+AGG | 0.692806 | 1:+794566 | MsG0180000047.01.T01:CDS |
ATCAGCTGAAAGCCCCAAGG+AGG | 0.696234 | 1:+797138 | MsG0180000047.01.T01:intron |
ATGGCTGAGGAATCCAAAGG+AGG | 0.701467 | 1:+797273 | MsG0180000047.01.T01:CDS |
GAATCGGTTGAAAGTCCATG+AGG | 0.719230 | 1:-794612 | None:intergenic |
TATATGGCTGAGGAATCCAA+AGG | 0.735087 | 1:+797270 | MsG0180000047.01.T01:CDS |
GCTGATGAGGTAAATGACGA+TGG | 0.743848 | 1:+799259 | MsG0180000047.01.T01:CDS |
CATTTGAAATCAGTTCCCTG+AGG | 0.745225 | 1:-794867 | None:intergenic |
GAGAGTAGTTAAGAACCCCG+AGG | 0.765227 | 1:+798927 | MsG0180000047.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATTTGTTTATCTAAAAA+AGG | + | Chr1:795679-795698 | MsG0180000047.01.T01:intron | 10.0% |
!!! | TTTTTTTTTTTTTTTTTGAG+AGG | + | Chr1:799557-799576 | MsG0180000047.01.T01:three_prime_UTR | 10.0% |
!! | ATACAAGTATGTATAATTTA+AGG | + | Chr1:797010-797029 | MsG0180000047.01.T01:intron | 15.0% |
!! | ATAGTATACAATAATAAGTA+GGG | + | Chr1:796630-796649 | MsG0180000047.01.T01:intron | 15.0% |
!! | CAATAAAAAAGAAACTTATT+AGG | + | Chr1:797819-797838 | MsG0180000047.01.T01:CDS | 15.0% |
!! | TATAATAAAAGTGATAGTTT+GGG | - | Chr1:796309-796328 | None:intergenic | 15.0% |
!! | TATAGTATACAATAATAAGT+AGG | + | Chr1:796629-796648 | MsG0180000047.01.T01:intron | 15.0% |
!! | TTATAATAAAAGTGATAGTT+TGG | - | Chr1:796310-796329 | None:intergenic | 15.0% |
!!! | ACTATTTTTGACAAAAATTA+AGG | - | Chr1:799502-799521 | None:intergenic | 15.0% |
!!! | TTTTTTAAAATATATGCTAC+AGG | + | Chr1:798522-798541 | MsG0180000047.01.T01:intron | 15.0% |
!! | AAAACTGATCATTTATAAAG+TGG | - | Chr1:799541-799560 | None:intergenic | 20.0% |
!! | AAGGTTATAAATCAAATTTG+TGG | + | Chr1:796508-796527 | MsG0180000047.01.T01:intron | 20.0% |
!! | ACAAATAAGTTCTATATTGT+AGG | + | Chr1:795281-795300 | MsG0180000047.01.T01:intron | 20.0% |
!! | ATAATAAAAGTGATAGTTTG+GGG | - | Chr1:796308-796327 | None:intergenic | 20.0% |
!! | ATAATTAAAGTATACAAACC+TGG | - | Chr1:795383-795402 | None:intergenic | 20.0% |
!! | ATGTACAAATTATAAATGCA+AGG | - | Chr1:795240-795259 | None:intergenic | 20.0% |
!! | ATGTTGAAGACATAAAATAA+GGG | - | Chr1:798983-799002 | None:intergenic | 20.0% |
!! | GGTTAAATTAAATTATCACA+GGG | + | Chr1:796701-796720 | MsG0180000047.01.T01:intron | 20.0% |
!! | GTCAAAATAAATACAATTTC+TGG | - | Chr1:798486-798505 | None:intergenic | 20.0% |
!! | TAGTATACAATAATAAGTAG+GGG | + | Chr1:796631-796650 | MsG0180000047.01.T01:intron | 20.0% |
!! | TATGTTGAAGACATAAAATA+AGG | - | Chr1:798984-799003 | None:intergenic | 20.0% |
!! | TGATTAGGTAAAATTGATTA+TGG | + | Chr1:794993-795012 | MsG0180000047.01.T01:intron | 20.0% |
!! | TTATCTATCCAATATACAAT+TGG | + | Chr1:796831-796850 | MsG0180000047.01.T01:intron | 20.0% |
!!! | CTTAACTTGTAAAACTATTT+GGG | + | Chr1:795538-795557 | MsG0180000047.01.T01:intron | 20.0% |
!!! | TGTTTTAATGCTGTTTTAAT+GGG | + | Chr1:795477-795496 | MsG0180000047.01.T01:intron | 20.0% |
!!! | TGTTTTAATGGGTTTATTTT+TGG | + | Chr1:795488-795507 | MsG0180000047.01.T01:intron | 20.0% |
!!! | TTCTTAACAAATGTTCTTTT+TGG | + | Chr1:797711-797730 | MsG0180000047.01.T01:intron | 20.0% |
!!! | TTGATAATACTTGTAATGTT+GGG | + | Chr1:797396-797415 | MsG0180000047.01.T01:intron | 20.0% |
! | AAACTTCAAGAAACATAGTT+AGG | - | Chr1:796753-796772 | None:intergenic | 25.0% |
! | ACATTACAAGTATTATCAAG+TGG | - | Chr1:797395-797414 | None:intergenic | 25.0% |
! | ACATTGTTAACTGATGAAAT+GGG | - | Chr1:798243-798262 | None:intergenic | 25.0% |
! | AGATCATTTCCAAAATCAAT+AGG | - | Chr1:796132-796151 | None:intergenic | 25.0% |
! | AGTATACAATAATAAGTAGG+GGG | + | Chr1:796632-796651 | MsG0180000047.01.T01:intron | 25.0% |
! | ATATCTTTATATGTTCCGTT+GGG | - | Chr1:797372-797391 | None:intergenic | 25.0% |
! | ATTAAAACACCATCATTCTT+TGG | - | Chr1:795466-795485 | None:intergenic | 25.0% |
! | CAATTCACTTTACAGTAATA+AGG | + | Chr1:794837-794856 | MsG0180000047.01.T01:CDS | 25.0% |
! | CCTATAAGAGTTAAATAACA+AGG | - | Chr1:798209-798228 | None:intergenic | 25.0% |
! | GCTTATATGAACTTATCTAT+TGG | + | Chr1:795515-795534 | MsG0180000047.01.T01:intron | 25.0% |
! | GGGTTAAATTAAATTATCAC+AGG | + | Chr1:796700-796719 | MsG0180000047.01.T01:intron | 25.0% |
! | GTATAATTTAAGGATTCAGT+TGG | + | Chr1:797020-797039 | MsG0180000047.01.T01:intron | 25.0% |
! | GTTTCTTGAAGTTTAAAAGA+TGG | + | Chr1:796759-796778 | MsG0180000047.01.T01:intron | 25.0% |
! | TACATTGTTAACTGATGAAA+TGG | - | Chr1:798244-798263 | None:intergenic | 25.0% |
! | TGAGAAACCATAAAAGAATT+AGG | - | Chr1:797953-797972 | None:intergenic | 25.0% |
! | TGATAATACTTGTAATGTTG+GGG | + | Chr1:797397-797416 | MsG0180000047.01.T01:intron | 25.0% |
! | TTCTGCATCAAAAGTTAAAT+TGG | - | Chr1:798036-798055 | None:intergenic | 25.0% |
! | TTGTTCATGCTTAAGAATAT+AGG | + | Chr1:796477-796496 | MsG0180000047.01.T01:intron | 25.0% |
! | TTTATGTCTTCAACATAGTT+GGG | + | Chr1:798987-799006 | MsG0180000047.01.T01:intron | 25.0% |
! | TTTGGAAAATCCATTAAACT+TGG | + | Chr1:798113-798132 | MsG0180000047.01.T01:CDS | 25.0% |
!! | AAGGATATCTTTTACATAAC+TGG | + | Chr1:798353-798372 | MsG0180000047.01.T01:CDS | 25.0% |
!! | AATTGATTTACATGTATGGT+TGG | - | Chr1:795155-795174 | None:intergenic | 25.0% |
!! | CAAGAATCCTAATTCTTTTA+TGG | + | Chr1:797943-797962 | MsG0180000047.01.T01:intron | 25.0% |
!! | CTTGATAATACTTGTAATGT+TGG | + | Chr1:797395-797414 | MsG0180000047.01.T01:intron | 25.0% |
!! | GTAGAATTGATTTACATGTA+TGG | - | Chr1:795159-795178 | None:intergenic | 25.0% |
!! | TAATAAGGATATTTTCCTCA+GGG | + | Chr1:794852-794871 | MsG0180000047.01.T01:CDS | 25.0% |
!! | TCAGGTATGTATATAGTTTT+GGG | + | Chr1:795837-795856 | MsG0180000047.01.T01:intron | 25.0% |
!! | TTCAAATTTAGAATGTACCT+CGG | - | Chr1:798947-798966 | None:intergenic | 25.0% |
!! | TTCAGGTATGTATATAGTTT+TGG | + | Chr1:795836-795855 | MsG0180000047.01.T01:intron | 25.0% |
!! | TTTTATGTCTTCAACATAGT+TGG | + | Chr1:798986-799005 | MsG0180000047.01.T01:intron | 25.0% |
!! | TTTTGATAAACGATTTCTGT+TGG | - | Chr1:798156-798175 | None:intergenic | 25.0% |
!!! | CAAGTTAGAATTGATTTTGA+AGG | + | Chr1:795104-795123 | MsG0180000047.01.T01:intron | 25.0% |
!!! | CCTTGTTATTTAACTCTTAT+AGG | + | Chr1:798206-798225 | MsG0180000047.01.T01:intron | 25.0% |
!!! | CTGTAGGTTTTTTAATGATA+AGG | + | Chr1:795439-795458 | MsG0180000047.01.T01:intron | 25.0% |
!!! | GCTTAACTTGTAAAACTATT+TGG | + | Chr1:795537-795556 | MsG0180000047.01.T01:intron | 25.0% |
!!! | GTGTTTTAATGCTGTTTTAA+TGG | + | Chr1:795476-795495 | MsG0180000047.01.T01:intron | 25.0% |
!!! | GTTTTAGTTTCCTAAGTTAA+AGG | + | Chr1:799401-799420 | MsG0180000047.01.T01:three_prime_UTR | 25.0% |
!!! | TAATAACTTCTGTTTTTCAC+AGG | + | Chr1:796873-796892 | MsG0180000047.01.T01:intron | 25.0% |
!!! | TACGCTTTTAGAATCAATTT+TGG | + | Chr1:795176-795195 | MsG0180000047.01.T01:intron | 25.0% |
!!! | TGATTTTAAAATCAAGCAAC+TGG | - | Chr1:796333-796352 | None:intergenic | 25.0% |
AAGAATATAGGTGTTCTTGA+AGG | + | Chr1:796489-796508 | MsG0180000047.01.T01:intron | 30.0% | |
AAGCTAACATGGAAAACTTA+TGG | - | Chr1:795603-795622 | None:intergenic | 30.0% | |
AAGTTCTATATTGTAGGCAT+TGG | + | Chr1:795287-795306 | MsG0180000047.01.T01:intron | 30.0% | |
ACAAGCTGAAAACATATAAG+CGG | - | Chr1:795578-795597 | None:intergenic | 30.0% | |
ACTATTTATGTGATACCCAA+CGG | + | Chr1:797354-797373 | MsG0180000047.01.T01:intron | 30.0% | |
AGTCAAAAAGCTCAAATACT+TGG | - | Chr1:797631-797650 | None:intergenic | 30.0% | |
AGTGAAAATTGTTGACATCT+AGG | - | Chr1:796425-796444 | None:intergenic | 30.0% | |
ATTGAAATGTGTGTGAATGA+AGG | + | Chr1:794722-794741 | MsG0180000047.01.T01:intron | 30.0% | |
ATTTCTCGTGATACATTCAA+TGG | - | Chr1:797773-797792 | None:intergenic | 30.0% | |
CAAAATGTCTTTATCAGTGA+GGG | - | Chr1:795331-795350 | None:intergenic | 30.0% | |
CATTAAACTTGGTATCATTG+AGG | + | Chr1:798124-798143 | MsG0180000047.01.T01:CDS | 30.0% | |
CATTGTTAACTGATGAAATG+GGG | - | Chr1:798242-798261 | None:intergenic | 30.0% | |
CTCAATGATACCAAGTTTAA+TGG | - | Chr1:798126-798145 | None:intergenic | 30.0% | |
CTGATCATTTATAAAGTGGA+TGG | - | Chr1:799537-799556 | None:intergenic | 30.0% | |
CTTAGAAGGTAAACTCTTAT+GGG | + | Chr1:796680-796699 | MsG0180000047.01.T01:intron | 30.0% | |
GAAGTTAGAATGTAAAGCTT+TGG | - | Chr1:795085-795104 | None:intergenic | 30.0% | |
GATATCTTTATATGTTCCGT+TGG | - | Chr1:797373-797392 | None:intergenic | 30.0% | |
GATGCAGATTAAGTTAGATA+AGG | + | Chr1:795722-795741 | MsG0180000047.01.T01:intron | 30.0% | |
GCAATAGACCAATTGTATAT+TGG | - | Chr1:796842-796861 | None:intergenic | 30.0% | |
GCTGATTGAAGAGTAAAATA+TGG | - | Chr1:797124-797143 | None:intergenic | 30.0% | |
GTCAAAAAGCTCAAATACTT+GGG | - | Chr1:797630-797649 | None:intergenic | 30.0% | |
GTTAAACTAAATGATACCCA+TGG | - | Chr1:796403-796422 | None:intergenic | 30.0% | |
TAAAATACACCTCAAAGAAG+AGG | + | Chr1:796245-796264 | MsG0180000047.01.T01:CDS | 30.0% | |
TAAATGATGTGAAGGCTATA+TGG | + | Chr1:797254-797273 | MsG0180000047.01.T01:CDS | 30.0% | |
TAACTTCCCTATCTATATCT+GGG | + | Chr1:796924-796943 | MsG0180000047.01.T01:CDS | 30.0% | |
TCAAAAATTTCAAGCGAATG+CGG | + | Chr1:794530-794549 | MsG0180000047.01.T01:CDS | 30.0% | |
TCTGAAGAAGAAAAACTTTG+AGG | + | Chr1:798418-798437 | MsG0180000047.01.T01:CDS | 30.0% | |
TCTTATCTTCATAATCCATC+AGG | - | Chr1:798591-798610 | None:intergenic | 30.0% | |
TGACAAAGAAAAGAAAGGTA+TGG | + | Chr1:797895-797914 | MsG0180000047.01.T01:intron | 30.0% | |
TTAAATTATCACAGGGTGAT+TGG | + | Chr1:796708-796727 | MsG0180000047.01.T01:intron | 30.0% | |
TTAACTTCCCTATCTATATC+TGG | + | Chr1:796923-796942 | MsG0180000047.01.T01:CDS | 30.0% | |
TTATAGCTTCTTTAACTCTC+TGG | + | Chr1:796535-796554 | MsG0180000047.01.T01:intron | 30.0% | |
TTGAAATGTGTGTGAATGAA+GGG | + | Chr1:794723-794742 | MsG0180000047.01.T01:intron | 30.0% | |
TTGCAATTTCAGAAGATACA+TGG | + | Chr1:796193-796212 | MsG0180000047.01.T01:CDS | 30.0% | |
! | AATTCTAGAAGCAAAATCCT+TGG | - | Chr1:799122-799141 | None:intergenic | 30.0% |
! | AATTGGTCTATTGCTAAATC+TGG | + | Chr1:796848-796867 | MsG0180000047.01.T01:intron | 30.0% |
! | ATTCTAGAAGCAAAATCCTT+GGG | - | Chr1:799121-799140 | None:intergenic | 30.0% |
! | CTCACTGATAAAGACATTTT+GGG | + | Chr1:795330-795349 | MsG0180000047.01.T01:CDS | 30.0% |
! | GAGGATTTGGTAAAGAATTT+GGG | + | Chr1:795792-795811 | MsG0180000047.01.T01:CDS | 30.0% |
! | GGATTTTCGAAGTATATGTT+TGG | - | Chr1:795219-795238 | None:intergenic | 30.0% |
! | GTAATAAGGATATTTTCCTC+AGG | + | Chr1:794851-794870 | MsG0180000047.01.T01:CDS | 30.0% |
! | GTTTTCACATAAGCTATAAG+TGG | - | Chr1:795633-795652 | None:intergenic | 30.0% |
! | TACATATCTAGAATGAAAGC+TGG | + | Chr1:798326-798345 | MsG0180000047.01.T01:CDS | 30.0% |
! | TATATGTTTGGTTCCACTTT+GGG | - | Chr1:795207-795226 | None:intergenic | 30.0% |
! | TCAAATTTAGAATGTACCTC+GGG | - | Chr1:798946-798965 | None:intergenic | 30.0% |
! | TTAACAATGTAGCTGATTCT+TGG | + | Chr1:798253-798272 | MsG0180000047.01.T01:intron | 30.0% |
! | TTCTAAAGACAAGGAACTAA+AGG | + | Chr1:798654-798673 | MsG0180000047.01.T01:CDS | 30.0% |
!! | ACAAATGTTCTTTTTGGCAT+TGG | + | Chr1:797717-797736 | MsG0180000047.01.T01:intron | 30.0% |
!! | CAAATGTTCTTTTTGGCATT+GGG | + | Chr1:797718-797737 | MsG0180000047.01.T01:intron | 30.0% |
!! | GTTAATTAGTTTGTCTCTGT+AGG | + | Chr1:795423-795442 | MsG0180000047.01.T01:intron | 30.0% |
!! | GTTGAAATTGCTTTTCTGAT+TGG | + | Chr1:796072-796091 | MsG0180000047.01.T01:intron | 30.0% |
!!! | AGTTCTTATTTTTCACTCCA+TGG | + | Chr1:796383-796402 | MsG0180000047.01.T01:intron | 30.0% |
!!! | GTTCTTATTTTTCACTCCAT+GGG | + | Chr1:796384-796403 | MsG0180000047.01.T01:intron | 30.0% |
!!! | TAATGGGTTTATTTTTGGAC+TGG | + | Chr1:795493-795512 | MsG0180000047.01.T01:intron | 30.0% |
!!! | TTTTTTACTCATGTTGCTGT+CGG | + | Chr1:799321-799340 | MsG0180000047.01.T01:three_prime_UTR | 30.0% |
AACTTCCCTATCTATATCTG+GGG | + | Chr1:796925-796944 | MsG0180000047.01.T01:CDS | 35.0% | |
AAGCTTACGGATCATATCAA+GGG | - | Chr1:797849-797868 | None:intergenic | 35.0% | |
AGGAAACTAAAACTCATGAC+AGG | - | Chr1:799394-799413 | None:intergenic | 35.0% | |
AGTGGTGATCTCAATCTAAT+TGG | + | Chr1:795954-795973 | MsG0180000047.01.T01:CDS | 35.0% | |
AGTTTCAAGCTGAAGTTTCA+AGG | + | Chr1:794797-794816 | MsG0180000047.01.T01:CDS | 35.0% | |
ATACTTGATGCAATACCTGA+TGG | + | Chr1:798573-798592 | MsG0180000047.01.T01:CDS | 35.0% | |
ATCCTATCTATTAGAGACAG+AGG | + | Chr1:795753-795772 | MsG0180000047.01.T01:CDS | 35.0% | |
CAGCAACATGAGTAAAAAAG+AGG | - | Chr1:799320-799339 | None:intergenic | 35.0% | |
CATTTCCAAAATCAATAGGC+TGG | - | Chr1:796128-796147 | None:intergenic | 35.0% | |
CCAAAATGTCTTTATCAGTG+AGG | - | Chr1:795332-795351 | None:intergenic | 35.0% | |
CCATAAGAGTTTACCTTCTA+AGG | - | Chr1:796682-796701 | None:intergenic | 35.0% | |
CCTTAGAAGGTAAACTCTTA+TGG | + | Chr1:796679-796698 | MsG0180000047.01.T01:intron | 35.0% | |
CTCAATCTAATTGGGCAATT+TGG | + | Chr1:795963-795982 | MsG0180000047.01.T01:CDS | 35.0% | |
CTTAAGCATGAACAAAGTGT+AGG | - | Chr1:796472-796491 | None:intergenic | 35.0% | |
GCATCAAGTATTCATCAACT+GGG | - | Chr1:798564-798583 | None:intergenic | 35.0% | |
GGAAACTAAAACTCATGACA+GGG | - | Chr1:799393-799412 | None:intergenic | 35.0% | |
GGAACTCTTAAATGATGTGA+AGG | + | Chr1:797246-797265 | MsG0180000047.01.T01:CDS | 35.0% | |
GGGTATCACATAAATAGTGA+TGG | - | Chr1:797352-797371 | None:intergenic | 35.0% | |
GTAGTGGTGACATCAAAATT+TGG | + | Chr1:798775-798794 | MsG0180000047.01.T01:CDS | 35.0% | |
GTGATGACAAACCTTTATCA+TGG | + | Chr1:797442-797461 | MsG0180000047.01.T01:CDS | 35.0% | |
GTGGTGATCTCAATCTAATT+GGG | + | Chr1:795955-795974 | MsG0180000047.01.T01:CDS | 35.0% | |
TAAGACTAATGACTGTGCTA+AGG | - | Chr1:799447-799466 | None:intergenic | 35.0% | |
TACCTCTGTCTCTAATAGAT+AGG | - | Chr1:795758-795777 | None:intergenic | 35.0% | |
TAGTGATGGCAATATTACCT+TGG | - | Chr1:797338-797357 | None:intergenic | 35.0% | |
TCCACTGACAAAGAAAAGAA+AGG | + | Chr1:797890-797909 | MsG0180000047.01.T01:CDS | 35.0% | |
TCTAACATACAACTTCAGGT+TGG | - | Chr1:797571-797590 | None:intergenic | 35.0% | |
TGATAAACGATTTCTGTTGG+TGG | - | Chr1:798153-798172 | None:intergenic | 35.0% | |
TGATAAGGACCAAAGAATGA+TGG | + | Chr1:795454-795473 | MsG0180000047.01.T01:intron | 35.0% | |
TGCATCAAGTATTCATCAAC+TGG | - | Chr1:798565-798584 | None:intergenic | 35.0% | |
TGCGGTGACAAAAATTGATT+AGG | + | Chr1:794978-794997 | MsG0180000047.01.T01:intron | 35.0% | |
TGGTGACATCAAAATTTGGT+TGG | + | Chr1:798779-798798 | MsG0180000047.01.T01:CDS | 35.0% | |
TTGGAAATGATCTGACTTTC+AGG | + | Chr1:796139-796158 | MsG0180000047.01.T01:intron | 35.0% | |
TTTCTTGTTGAATGATCCCA+AGG | + | Chr1:799102-799121 | MsG0180000047.01.T01:CDS | 35.0% | |
! | ACCTTTCTTTTCTTTGTCAG+TGG | - | Chr1:797894-797913 | None:intergenic | 35.0% |
! | ATAGCAAAATCTGGAACTTC+AGG | + | Chr1:795819-795838 | MsG0180000047.01.T01:CDS | 35.0% |
! | ATCGACATTGTCATTTGCAA+GGG | - | Chr1:798716-798735 | None:intergenic | 35.0% |
! | ATCTGACTTTCAGGTATGTA+TGG | + | Chr1:796148-796167 | MsG0180000047.01.T01:intron | 35.0% |
! | ATTTTCCAGTTGTTCTTTGC+TGG | - | Chr1:798381-798400 | None:intergenic | 35.0% |
! | CAAATTTAGAATGTACCTCG+GGG | - | Chr1:798945-798964 | None:intergenic | 35.0% |
! | CCTCACTGATAAAGACATTT+TGG | + | Chr1:795329-795348 | MsG0180000047.01.T01:CDS | 35.0% |
! | CTTTTCTGATTGGTATGTTG+TGG | + | Chr1:796082-796101 | MsG0180000047.01.T01:intron | 35.0% |
! | GGAGGATTTGGTAAAGAATT+TGG | + | Chr1:795791-795810 | MsG0180000047.01.T01:CDS | 35.0% |
! | GTATATGTTTGGTTCCACTT+TGG | - | Chr1:795208-795227 | None:intergenic | 35.0% |
! | GTGGTTTTCATAAGCTAACA+TGG | - | Chr1:795614-795633 | None:intergenic | 35.0% |
! | TAAATGTTGGTTACCATTCG+AGG | - | Chr1:799604-799623 | None:intergenic | 35.0% |
! | TCTATTAGAGACAGAGGTAT+TGG | + | Chr1:795759-795778 | MsG0180000047.01.T01:CDS | 35.0% |
! | TCTGACTTTCAGGTATGTAT+GGG | + | Chr1:796149-796168 | MsG0180000047.01.T01:intron | 35.0% |
! | TGAAGTTCCAGATTTTGCTA+TGG | - | Chr1:795820-795839 | None:intergenic | 35.0% |
! | TGGTATGTTGTGGATGTTTT+CGG | + | Chr1:796092-796111 | MsG0180000047.01.T01:intron | 35.0% |
! | TTCAACATAGTTGGGCTTTT+TGG | + | Chr1:798995-799014 | MsG0180000047.01.T01:intron | 35.0% |
!! | ACTCAATTGGCTTACTTTTC+AGG | + | Chr1:799021-799040 | MsG0180000047.01.T01:intron | 35.0% |
!! | CTGGTGTGAAGGATTTTAAT+TGG | + | Chr1:795890-795909 | MsG0180000047.01.T01:intron | 35.0% |
!! | CTTCTGTTTTTCACAGGAAT+TGG | + | Chr1:796879-796898 | MsG0180000047.01.T01:intron | 35.0% |
!! | GATAAAGACATTTTGGGTGA+AGG | + | Chr1:795336-795355 | MsG0180000047.01.T01:CDS | 35.0% |
!!! | GGCTTTTTGGTTTACTCAAT+TGG | + | Chr1:799008-799027 | MsG0180000047.01.T01:intron | 35.0% |
!!! | GTGCGTTTTGAGTTTTGAAT+CGG | + | Chr1:794941-794960 | MsG0180000047.01.T01:intron | 35.0% |
!!! | TCCTTCACTGTCTTTGTTTT+AGG | - | Chr1:797211-797230 | None:intergenic | 35.0% |
!!! | TTATGCCAGCCTATTGATTT+TGG | + | Chr1:796120-796139 | MsG0180000047.01.T01:intron | 35.0% |
AAAAAGCAAGCATACATGCG+CGG | + | Chr1:798850-798869 | MsG0180000047.01.T01:CDS | 40.0% | |
AAAGTCAGTGAAGGGAATTC+AGG | - | Chr1:798004-798023 | None:intergenic | 40.0% | |
AAATTTCAAGCGAATGCGGA+AGG | + | Chr1:794534-794553 | MsG0180000047.01.T01:CDS | 40.0% | |
AAGGCAAAATTCCAACGGAT+GGG | - | Chr1:799428-799447 | None:intergenic | 40.0% | |
ACAAACCTGGATTTCAAGCT+TGG | - | Chr1:795370-795389 | None:intergenic | 40.0% | |
AGAAGCGAAAAGTCAGTGAA+GGG | - | Chr1:798012-798031 | None:intergenic | 40.0% | |
AGCTGAAGTTTCAAGGCTTA+TGG | + | Chr1:794804-794823 | MsG0180000047.01.T01:CDS | 40.0% | |
AGGTATGGTGTAATGACTGT+TGG | + | Chr1:797910-797929 | MsG0180000047.01.T01:intron | 40.0% | |
ATATTACCTTGGCAAGAGAG+TGG | - | Chr1:797327-797346 | None:intergenic | 40.0% | |
ATTTACAGCACCAAGTCTGA+GGG | + | Chr1:798281-798300 | MsG0180000047.01.T01:intron | 40.0% | |
ATTTGGTTGGAGTGCAAACA+TGG | + | Chr1:798792-798811 | MsG0180000047.01.T01:CDS | 40.0% | |
CAAGCTTACGGATCATATCA+AGG | - | Chr1:797850-797869 | None:intergenic | 40.0% | |
CCAAAGGTGGAAGAAAAACT+CGG | + | Chr1:794582-794601 | MsG0180000047.01.T01:CDS | 40.0% | |
CCACTTAGTTAGATCCTTGA+AGG | - | Chr1:798683-798702 | None:intergenic | 40.0% | |
CCTCTTGACAACATCTGAAT+CGG | - | Chr1:794631-794650 | None:intergenic | 40.0% | |
CCTTCAAGGATCTAACTAAG+TGG | + | Chr1:798680-798699 | MsG0180000047.01.T01:CDS | 40.0% | |
CGCTCGCTTACAATTGAAAA+GGG | - | Chr1:797977-797996 | None:intergenic | 40.0% | |
CTCGTCTAACATACAACTTC+AGG | - | Chr1:797575-797594 | None:intergenic | 40.0% | |
CTCTTAGCTGAAATGTTTGC+TGG | + | Chr1:795860-795879 | MsG0180000047.01.T01:intron | 40.0% | |
GAAGTTCCAAAATGTGTCCA+AGG | + | Chr1:798609-798628 | MsG0180000047.01.T01:CDS | 40.0% | |
GATACATGGAATGAACCACT+AGG | + | Chr1:796207-796226 | MsG0180000047.01.T01:CDS | 40.0% | |
GCCTAAAACAAAGACAGTGA+AGG | + | Chr1:797207-797226 | MsG0180000047.01.T01:CDS | 40.0% | |
GGAACTAAAGGAATCCTTCA+AGG | + | Chr1:798666-798685 | MsG0180000047.01.T01:CDS | 40.0% | |
GGTATGGTGTAATGACTGTT+GGG | + | Chr1:797911-797930 | MsG0180000047.01.T01:intron | 40.0% | |
GTAAAGTGGCTCCATGATAA+AGG | - | Chr1:797456-797475 | None:intergenic | 40.0% | |
GTGCTAAGGCAAAATTCCAA+CGG | - | Chr1:799433-799452 | None:intergenic | 40.0% | |
GTTGAGAAAATGCAGACAAG+TGG | + | Chr1:795936-795955 | MsG0180000047.01.T01:CDS | 40.0% | |
TAAGGCAAAATTCCAACGGA+TGG | - | Chr1:799429-799448 | None:intergenic | 40.0% | |
TAGAAGCGAAAAGTCAGTGA+AGG | - | Chr1:798013-798032 | None:intergenic | 40.0% | |
TAGAATGAAAGCTGGACAGA+AGG | + | Chr1:798334-798353 | MsG0180000047.01.T01:CDS | 40.0% | |
TATATGGCTGAGGAATCCAA+AGG | + | Chr1:797270-797289 | MsG0180000047.01.T01:CDS | 40.0% | |
TATTTACAGCACCAAGTCTG+AGG | + | Chr1:798280-798299 | MsG0180000047.01.T01:intron | 40.0% | |
TCAAGGATCTAACTAAGTGG+TGG | + | Chr1:798683-798702 | MsG0180000047.01.T01:CDS | 40.0% | |
TCATCTTCACTTTCCTCCTT+GGG | - | Chr1:797154-797173 | None:intergenic | 40.0% | |
TCCAAACTCATTCCAGAACT+TGG | - | Chr1:798099-798118 | None:intergenic | 40.0% | |
TCTCTTCTCATCAACATCAG+AGG | - | Chr1:798066-798085 | None:intergenic | 40.0% | |
TGAAGTAGTAGATCCACCAA+AGG | + | Chr1:794566-794585 | MsG0180000047.01.T01:CDS | 40.0% | |
TGCTTCCCCAGATATAGATA+GGG | - | Chr1:796933-796952 | None:intergenic | 40.0% | |
TGGAGTATGCATACCTTAGA+AGG | + | Chr1:796666-796685 | MsG0180000047.01.T01:intron | 40.0% | |
TGGTATGACAAAGGAGGATT+TGG | + | Chr1:795779-795798 | MsG0180000047.01.T01:CDS | 40.0% | |
TGTCAATTTACCCTCAGACT+TGG | - | Chr1:798294-798313 | None:intergenic | 40.0% | |
TGTCTTTATCAGTGAGGGAT+AGG | - | Chr1:795326-795345 | None:intergenic | 40.0% | |
TGTGAAGATATCCAACCGAT+TGG | + | Chr1:798738-798757 | MsG0180000047.01.T01:CDS | 40.0% | |
TGTGTGTGAATGAAGGGAAT+CGG | + | Chr1:794729-794748 | MsG0180000047.01.T01:intron | 40.0% | |
TTCATCTTCACTTTCCTCCT+TGG | - | Chr1:797155-797174 | None:intergenic | 40.0% | |
TTCCAAAATGTGTCCAAGGA+GGG | + | Chr1:798613-798632 | MsG0180000047.01.T01:CDS | 40.0% | |
TTGCTTCCCCAGATATAGAT+AGG | - | Chr1:796934-796953 | None:intergenic | 40.0% | |
TTGGGTACCATAGCAAAATC+TGG | + | Chr1:795810-795829 | MsG0180000047.01.T01:CDS | 40.0% | |
TTTGATGTCACCACTACACA+AGG | - | Chr1:798772-798791 | None:intergenic | 40.0% | |
! | AAATGACGATGGTGATGTCA+AGG | + | Chr1:799270-799289 | MsG0180000047.01.T01:CDS | 40.0% |
! | AATGTTTGCTGGTTGTGATC+TGG | + | Chr1:795871-795890 | MsG0180000047.01.T01:intron | 40.0% |
! | AGTTTTTCTTCCACCTTTGG+TGG | - | Chr1:794582-794601 | None:intergenic | 40.0% |
! | CATCGACATTGTCATTTGCA+AGG | - | Chr1:798717-798736 | None:intergenic | 40.0% |
! | CATTTGAAATCAGTTCCCTG+AGG | - | Chr1:794870-794889 | None:intergenic | 40.0% |
! | CCTTTTCAATTGTAAGCGAG+CGG | + | Chr1:797975-797994 | MsG0180000047.01.T01:intron | 40.0% |
! | CTAATTGGGCAATTTGGAGT+TGG | + | Chr1:795969-795988 | MsG0180000047.01.T01:CDS | 40.0% |
! | GCAAAGTGTCAGAATCAACA+AGG | - | Chr1:797751-797770 | None:intergenic | 40.0% |
! | GTATGGGAATCTAAAGCTGA+TGG | + | Chr1:796165-796184 | MsG0180000047.01.T01:CDS | 40.0% |
! | TCAGCTTTTATTGCCTCGAA+TGG | + | Chr1:799588-799607 | MsG0180000047.01.T01:three_prime_UTR | 40.0% |
! | TCTGATGTTGATGAGAAGAG+AGG | + | Chr1:798065-798084 | MsG0180000047.01.T01:CDS | 40.0% |
! | TGGTGGATCTACTACTTCAT+CGG | - | Chr1:794565-794584 | None:intergenic | 40.0% |
! | TTTTCTTCTTCAGACGCTCA+AGG | - | Chr1:798412-798431 | None:intergenic | 40.0% |
!! | ACCAAGTTCTGGAATGAGTT+TGG | + | Chr1:798095-798114 | MsG0180000047.01.T01:CDS | 40.0% |
!! | AGGTATTGGTATGACAAAGG+AGG | + | Chr1:795773-795792 | MsG0180000047.01.T01:CDS | 40.0% |
!! | CACAAGGAGTGTTATCCAAT+CGG | - | Chr1:798756-798775 | None:intergenic | 40.0% |
!! | CAGAGGTATTGGTATGACAA+AGG | + | Chr1:795770-795789 | MsG0180000047.01.T01:CDS | 40.0% |
!! | TCTTTTTGGCATTGGGAACA+GGG | + | Chr1:797725-797744 | MsG0180000047.01.T01:intron | 40.0% |
!! | TGTAGGCATTGGACAAGATT+AGG | + | Chr1:795298-795317 | MsG0180000047.01.T01:intron | 40.0% |
!! | TGTCGGTTGCAGTTATTTCT+TGG | + | Chr1:799338-799357 | MsG0180000047.01.T01:three_prime_UTR | 40.0% |
!! | TTCTTTTTGGCATTGGGAAC+AGG | + | Chr1:797724-797743 | MsG0180000047.01.T01:intron | 40.0% |
AAACATAGTTAGGCGAGTGC+TGG | - | Chr1:796743-796762 | None:intergenic | 45.0% | |
AAGTTAAAGGACCCATCCGT+TGG | + | Chr1:799414-799433 | MsG0180000047.01.T01:three_prime_UTR | 45.0% | |
ACCCTATCATCAAGGAACTC+CGG | + | Chr1:798902-798921 | MsG0180000047.01.T01:CDS | 45.0% | |
AGTAGTAGATCCACCAAAGG+TGG | + | Chr1:794569-794588 | MsG0180000047.01.T01:CDS | 45.0% | |
ATGTGAAGGCTATATGGCTG+AGG | + | Chr1:797260-797279 | MsG0180000047.01.T01:CDS | 45.0% | |
ATTCTACCACTCTCTTGCCA+AGG | + | Chr1:797318-797337 | MsG0180000047.01.T01:CDS | 45.0% | |
CATCACCTTCAGCAGTAAAG+TGG | - | Chr1:797470-797489 | None:intergenic | 45.0% | |
CATCTTCACTTTCCTCCTTG+GGG | - | Chr1:797153-797172 | None:intergenic | 45.0% | |
CCGATTCAGATGTTGTCAAG+AGG | + | Chr1:794628-794647 | MsG0180000047.01.T01:CDS | 45.0% | |
CCGCTCGCTTACAATTGAAA+AGG | - | Chr1:797978-797997 | None:intergenic | 45.0% | |
CTATATCTGGGGAAGCAAAG+AGG | + | Chr1:796936-796955 | MsG0180000047.01.T01:CDS | 45.0% | |
GAAGGAAACGACTTACGAGT+GGG | + | Chr1:797225-797244 | MsG0180000047.01.T01:CDS | 45.0% | |
GAATCCAAAGGAGGTTACAG+AGG | + | Chr1:797282-797301 | MsG0180000047.01.T01:CDS | 45.0% | |
GAATCGGTTGAAAGTCCATG+AGG | - | Chr1:794615-794634 | None:intergenic | 45.0% | |
GAGGTCAATACACCAAGTTC+TGG | + | Chr1:798084-798103 | MsG0180000047.01.T01:CDS | 45.0% | |
GCTGATGAGGTAAATGACGA+TGG | + | Chr1:799259-799278 | MsG0180000047.01.T01:CDS | 45.0% | |
GGAAGATGAGACTGAAGTTG+AGG | + | Chr1:799195-799214 | MsG0180000047.01.T01:CDS | 45.0% | |
GGATAACACTCCTTGTGTAG+TGG | + | Chr1:798759-798778 | MsG0180000047.01.T01:CDS | 45.0% | |
GGTTCTTAACTACTCTCTCC+CGG | - | Chr1:798924-798943 | None:intergenic | 45.0% | |
GTTCCAAAATGTGTCCAAGG+AGG | + | Chr1:798612-798631 | MsG0180000047.01.T01:CDS | 45.0% | |
TAACTCTCGTACAAGTCCTG+AGG | - | Chr1:797531-797550 | None:intergenic | 45.0% | |
TCCTAGACACCCTATCATCA+AGG | + | Chr1:798894-798913 | MsG0180000047.01.T01:CDS | 45.0% | |
TCTTCCTCTGTAACCTCCTT+TGG | - | Chr1:797289-797308 | None:intergenic | 45.0% | |
TGAAGGAAACGACTTACGAG+TGG | + | Chr1:797224-797243 | MsG0180000047.01.T01:CDS | 45.0% | |
TGCTTCAAACGAAGCTGATG+AGG | + | Chr1:799246-799265 | MsG0180000047.01.T01:CDS | 45.0% | |
TGGAACCAGCAAAGAACAAC+TGG | + | Chr1:798373-798392 | MsG0180000047.01.T01:CDS | 45.0% | |
TTCTTCAGACGCTCAAGGAA+TGG | - | Chr1:798407-798426 | None:intergenic | 45.0% | |
! | ACGGATGGGTCCTTTAACTT+AGG | - | Chr1:799414-799433 | None:intergenic | 45.0% |
! | AGTAGGGGGTAGTGTTTCTA+TGG | + | Chr1:796646-796665 | MsG0180000047.01.T01:intron | 45.0% |
! | ATGTTTGGTTCCACTTTGGG+AGG | - | Chr1:795204-795223 | None:intergenic | 45.0% |
! | CACTTTCGAAAAGTGCAGTC+TGG | - | Chr1:799081-799100 | None:intergenic | 45.0% |
! | CAGACTGCACTTTTCGAAAG+TGG | + | Chr1:799079-799098 | MsG0180000047.01.T01:CDS | 45.0% |
! | CCGAGTTTTTCTTCCACCTT+TGG | - | Chr1:794585-794604 | None:intergenic | 45.0% |
! | CGGGAAGGATTCTAAAGACA+AGG | + | Chr1:798645-798664 | MsG0180000047.01.T01:CDS | 45.0% |
! | GGATGAGAGTGTGAAGCAAA+CGG | + | Chr1:799042-799061 | MsG0180000047.01.T01:intron | 45.0% |
! | GTGCTTTAGGTGGCACATAA+AGG | - | Chr1:797509-797528 | None:intergenic | 45.0% |
! | GTTGGGGATTTGTGTTTTGC+AGG | + | Chr1:797413-797432 | MsG0180000047.01.T01:intron | 45.0% |
! | TACAAGTCCTGAGGTGCTTT+AGG | - | Chr1:797522-797541 | None:intergenic | 45.0% |
! | TCATCAGCTTCGTTTGAAGC+AGG | - | Chr1:799247-799266 | None:intergenic | 45.0% |
! | TCCTTGATGATAGGGTGTCT+AGG | - | Chr1:798898-798917 | None:intergenic | 45.0% |
!! | AAGCAAAGAGGTTGATGTGG+AGG | + | Chr1:796948-796967 | MsG0180000047.01.T01:CDS | 45.0% |
!! | AGGAGTGTTATCCAATCGGT+TGG | - | Chr1:798752-798771 | None:intergenic | 45.0% |
!! | TCGGTGTGTGTTTAGTTCTG+CGG | + | Chr1:794960-794979 | MsG0180000047.01.T01:intron | 45.0% |
!!! | AATTTTGGCTCCTCCCAAAG+TGG | + | Chr1:795191-795210 | MsG0180000047.01.T01:intron | 45.0% |
ACTTCTCCGCATTACTGCGA+AGG | - | Chr1:794774-794793 | None:intergenic | 50.0% | |
AGACTCGTCGTCTTCATCAG+CGG | - | Chr1:796977-796996 | None:intergenic | 50.0% | |
ATACTCTTCCACGTACTCGC+TGG | - | Chr1:796271-796290 | None:intergenic | 50.0% | |
ATCTCTGTTCCACGTCCTAG+TGG | - | Chr1:796225-796244 | None:intergenic | 50.0% | |
ATGGCTGAGGAATCCAAAGG+AGG | + | Chr1:797273-797292 | MsG0180000047.01.T01:CDS | 50.0% | |
CAACGCCAAGCTTGAAATCC+AGG | + | Chr1:795362-795381 | MsG0180000047.01.T01:CDS | 50.0% | |
CAGTCCTGATGCAACAGTTG+AGG | + | Chr1:799171-799190 | MsG0180000047.01.T01:CDS | 50.0% | |
CCCTATCATCAAGGAACTCC+GGG | + | Chr1:798903-798922 | MsG0180000047.01.T01:CDS | 50.0% | |
CTGGTTGTGATCTGGTGTGA+AGG | + | Chr1:795879-795898 | MsG0180000047.01.T01:intron | 50.0% | |
CTTCTCCGCATTACTGCGAA+GGG | - | Chr1:794773-794792 | None:intergenic | 50.0% | |
GAGAGTAGTTAAGAACCCCG+AGG | + | Chr1:798927-798946 | MsG0180000047.01.T01:CDS | 50.0% | |
GAGATCCCTTCGCAGTAATG+CGG | + | Chr1:794765-794784 | MsG0180000047.01.T01:CDS | 50.0% | |
GCGAAGGGATCTCTTCGAAA+TGG | - | Chr1:794758-794777 | None:intergenic | 50.0% | |
TCAATCAGCTGAAAGCCCCA+AGG | + | Chr1:797135-797154 | MsG0180000047.01.T01:intron | 50.0% | |
TCCTCCTCAACTGTTGCATC+AGG | - | Chr1:799178-799197 | None:intergenic | 50.0% | |
TCCTGATGCAACAGTTGAGG+AGG | + | Chr1:799174-799193 | MsG0180000047.01.T01:CDS | 50.0% | |
TGAAGACGACGAGTCTTCTG+AGG | + | Chr1:796981-797000 | MsG0180000047.01.T01:CDS | 50.0% | |
TGGAATGAACCACTAGGACG+TGG | + | Chr1:796213-796232 | MsG0180000047.01.T01:CDS | 50.0% | |
! | AAGTCCTGAGGTGCTTTAGG+TGG | - | Chr1:797519-797538 | None:intergenic | 50.0% |
! | CCCGGAGTTCCTTGATGATA+GGG | - | Chr1:798906-798925 | None:intergenic | 50.0% |
! | CTTTGTCAGTGGACTCGTCA+GGG | - | Chr1:797883-797902 | None:intergenic | 50.0% |
! | GACCCTCCTTGGACACATTT+TGG | - | Chr1:798618-798637 | None:intergenic | 50.0% |
! | TCCAAGGAGGGTCTGAAACT+CGG | + | Chr1:798625-798644 | MsG0180000047.01.T01:CDS | 50.0% |
! | TCCCGGAGTTCCTTGATGAT+AGG | - | Chr1:798907-798926 | None:intergenic | 50.0% |
! | TCTTTGTCAGTGGACTCGTC+AGG | - | Chr1:797884-797903 | None:intergenic | 50.0% |
! | TGGAGCCACTTTACTGCTGA+AGG | + | Chr1:797462-797481 | MsG0180000047.01.T01:CDS | 50.0% |
!! | AAACTCGGTGCTGTTCCTCA+TGG | + | Chr1:794597-794616 | MsG0180000047.01.T01:CDS | 50.0% |
!! | GGGAAGCAAAGAGGTTGATG+TGG | + | Chr1:796945-796964 | MsG0180000047.01.T01:CDS | 50.0% |
AAGCATACATGCGCGGCAAG+AGG | + | Chr1:798857-798876 | MsG0180000047.01.T01:CDS | 55.0% | |
AGCATACATGCGCGGCAAGA+GGG | + | Chr1:798858-798877 | MsG0180000047.01.T01:CDS | 55.0% | |
ATCAGCTGAAAGCCCCAAGG+AGG | + | Chr1:797138-797157 | MsG0180000047.01.T01:intron | 55.0% | |
GACTCGTCGTCTTCATCAGC+GGG | - | Chr1:796976-796995 | None:intergenic | 55.0% | |
GATCCGTAAGCTTGCCGAAG+AGG | + | Chr1:797856-797875 | MsG0180000047.01.T01:CDS | 55.0% | |
GGTCCTCTTCGGCAAGCTTA+CGG | - | Chr1:797862-797881 | None:intergenic | 55.0% | |
! | ACTCGCTGGCCTCTTCTTTG+AGG | - | Chr1:796257-796276 | None:intergenic | 55.0% |
! | CCAAGGAGGGTCTGAAACTC+GGG | + | Chr1:798626-798645 | MsG0180000047.01.T01:CDS | 55.0% |
! | CGACGAGTCTTCTGAGGAAG+AGG | + | Chr1:796987-797006 | MsG0180000047.01.T01:CDS | 55.0% |
! | TGTGCCACCTAAAGCACCTC+AGG | + | Chr1:797512-797531 | MsG0180000047.01.T01:CDS | 55.0% |
AGAAGAGGCCAGCGAGTACG+TGG | + | Chr1:796260-796279 | MsG0180000047.01.T01:CDS | 60.0% | |
CCCGAGTTTCAGACCCTCCT+TGG | - | Chr1:798629-798648 | None:intergenic | 60.0% | |
CTCTCTGGCGTGCGTGCATA+AGG | + | Chr1:796550-796569 | MsG0180000047.01.T01:intron | 60.0% | |
GGACTCGTCAGGGTCCTCTT+CGG | - | Chr1:797873-797892 | None:intergenic | 60.0% | |
! | GGAGGGTCTGAAACTCGGGA+AGG | + | Chr1:798630-798649 | MsG0180000047.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 794510 | 799633 | 794510 | ID=MsG0180000047.01;Name=MsG0180000047.01 |
Chr1 | mRNA | 794510 | 799633 | 794510 | ID=MsG0180000047.01.T01;Parent=MsG0180000047.01;Name=MsG0180000047.01.T01;_AED=0.29;_eAED=0.30;_QI=0|1|0.92|1|1|1|14|330|802 |
Chr1 | exon | 799043 | 799633 | 799043 | ID=MsG0180000047.01.T01:exon:7648;Parent=MsG0180000047.01.T01 |
Chr1 | exon | 798544 | 798948 | 798544 | ID=MsG0180000047.01.T01:exon:7647;Parent=MsG0180000047.01.T01 |
Chr1 | exon | 798289 | 798439 | 798289 | ID=MsG0180000047.01.T01:exon:7646;Parent=MsG0180000047.01.T01 |
Chr1 | exon | 798054 | 798192 | 798054 | ID=MsG0180000047.01.T01:exon:7645;Parent=MsG0180000047.01.T01 |
Chr1 | exon | 797746 | 797911 | 797746 | ID=MsG0180000047.01.T01:exon:7644;Parent=MsG0180000047.01.T01 |
Chr1 | exon | 797435 | 797650 | 797435 | ID=MsG0180000047.01.T01:exon:7643;Parent=MsG0180000047.01.T01 |
Chr1 | exon | 797143 | 797339 | 797143 | ID=MsG0180000047.01.T01:exon:7642;Parent=MsG0180000047.01.T01 |
Chr1 | exon | 796895 | 797015 | 796895 | ID=MsG0180000047.01.T01:exon:7641;Parent=MsG0180000047.01.T01 |
Chr1 | exon | 796161 | 796299 | 796161 | ID=MsG0180000047.01.T01:exon:7640;Parent=MsG0180000047.01.T01 |
Chr1 | exon | 795931 | 796057 | 795931 | ID=MsG0180000047.01.T01:exon:7639;Parent=MsG0180000047.01.T01 |
Chr1 | exon | 795729 | 795840 | 795729 | ID=MsG0180000047.01.T01:exon:7638;Parent=MsG0180000047.01.T01 |
Chr1 | exon | 795303 | 795383 | 795303 | ID=MsG0180000047.01.T01:exon:7637;Parent=MsG0180000047.01.T01 |
Chr1 | exon | 794744 | 794897 | 794744 | ID=MsG0180000047.01.T01:exon:7636;Parent=MsG0180000047.01.T01 |
Chr1 | exon | 794510 | 794649 | 794510 | ID=MsG0180000047.01.T01:exon:7635;Parent=MsG0180000047.01.T01 |
Chr1 | CDS | 794510 | 794649 | 794510 | ID=MsG0180000047.01.T01:cds;Parent=MsG0180000047.01.T01 |
Chr1 | CDS | 794744 | 794897 | 794744 | ID=MsG0180000047.01.T01:cds;Parent=MsG0180000047.01.T01 |
Chr1 | CDS | 795303 | 795383 | 795303 | ID=MsG0180000047.01.T01:cds;Parent=MsG0180000047.01.T01 |
Chr1 | CDS | 795729 | 795840 | 795729 | ID=MsG0180000047.01.T01:cds;Parent=MsG0180000047.01.T01 |
Chr1 | CDS | 795931 | 796057 | 795931 | ID=MsG0180000047.01.T01:cds;Parent=MsG0180000047.01.T01 |
Chr1 | CDS | 796161 | 796299 | 796161 | ID=MsG0180000047.01.T01:cds;Parent=MsG0180000047.01.T01 |
Chr1 | CDS | 796895 | 797015 | 796895 | ID=MsG0180000047.01.T01:cds;Parent=MsG0180000047.01.T01 |
Chr1 | CDS | 797143 | 797339 | 797143 | ID=MsG0180000047.01.T01:cds;Parent=MsG0180000047.01.T01 |
Chr1 | CDS | 797435 | 797650 | 797435 | ID=MsG0180000047.01.T01:cds;Parent=MsG0180000047.01.T01 |
Chr1 | CDS | 797746 | 797911 | 797746 | ID=MsG0180000047.01.T01:cds;Parent=MsG0180000047.01.T01 |
Chr1 | CDS | 798054 | 798192 | 798054 | ID=MsG0180000047.01.T01:cds;Parent=MsG0180000047.01.T01 |
Chr1 | CDS | 798289 | 798439 | 798289 | ID=MsG0180000047.01.T01:cds;Parent=MsG0180000047.01.T01 |
Chr1 | CDS | 798544 | 798948 | 798544 | ID=MsG0180000047.01.T01:cds;Parent=MsG0180000047.01.T01 |
Chr1 | CDS | 799043 | 799303 | 799043 | ID=MsG0180000047.01.T01:cds;Parent=MsG0180000047.01.T01 |
Chr1 | three_prime_UTR | 799304 | 799633 | 799304 | ID=MsG0180000047.01.T01:three_prime_utr;Parent=MsG0180000047.01.T01 |
Gene Sequence |
Protein sequence |