AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003303.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003303.01.T01 MTR_1g057860 96.419 726 26 0 1 726 1 726 0.0 1425
MsG0180003303.01.T01 MTR_4g129940 80.000 140 27 1 430 569 45 183 2.75e-72 234
MsG0180003303.01.T01 MTR_1g022010 71.329 143 19 1 582 724 49 169 7.62e-59 203
MsG0180003303.01.T01 MTR_5g091860 86.000 100 14 0 627 726 13 112 7.53e-51 176
MsG0180003303.01.T01 MTR_7g012030 77.632 76 17 0 445 520 1 76 2.35e-33 128
MsG0180003303.01.T01 MTR_1g057880 66.000 100 13 1 626 725 1 79 4.84e-33 124
MsG0180003303.01.T01 MTR_7g101940 31.615 291 180 7 434 718 87 364 3.82e-31 129
MsG0180003303.01.T01 MTR_6g038890 62.500 88 28 2 445 531 1 84 1.96e-27 111
MsG0180003303.01.T01 MTR_6g046330 67.105 76 25 0 457 532 3 78 1.28e-25 108
MsG0180003303.01.T01 MTR_4g067160 26.441 295 182 13 439 716 788 1064 7.66e-14 76.3
MsG0180003303.01.T01 MTR_1g088900 50.667 75 15 1 496 570 95 147 1.82e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003303.01.T01 AT3G02760 55.556 747 298 10 2 725 4 739 0.0 736
MsG0180003303.01.T01 AT3G02760 55.556 747 298 10 2 725 4 739 0.0 736
MsG0180003303.01.T01 AT3G46100 32.082 293 176 8 434 718 72 349 1.30e-32 133
MsG0180003303.01.T01 AT5G03406 32.620 187 119 4 434 614 72 257 5.81e-21 94.0
MsG0180003303.01.T01 AT3G59410 25.795 283 178 10 447 712 796 1063 2.40e-15 81.3
MsG0180003303.01.T01 AT3G59410 25.795 283 178 10 447 712 796 1063 2.44e-15 81.3
MsG0180003303.01.T01 AT3G59410 25.795 283 178 10 447 712 796 1063 2.44e-15 81.3
MsG0180003303.01.T01 AT3G59410 25.795 283 178 10 447 712 820 1087 2.50e-15 81.3
MsG0180003303.01.T01 AT3G59410 25.795 283 178 10 447 712 797 1064 2.55e-15 81.3

Find 179 sgRNAs with CRISPR-Local

Find 464 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGACATAAGTTGGGGAAAT+TGG 0.195576 1:-60244202 MsG0180003303.01.T01:CDS
GAAGAAGAAGAAAGCTGTTT+TGG 0.204635 1:-60243797 MsG0180003303.01.T01:CDS
CATCAATCAGCGGGTTTGTT+AGG 0.213228 1:-60244483 MsG0180003303.01.T01:CDS
ATTGGAAATGTTCGGGAAAA+TGG 0.223672 1:-60243841 MsG0180003303.01.T01:CDS
TCACGGTATCTTCCTTTAGA+TGG 0.228361 1:+60242341 None:intergenic
AGTTTCGATAACAATGTTAA+AGG 0.237554 1:+60240455 None:intergenic
TGTAGAGAATTTGCGGAAAT+TGG 0.248725 1:-60243710 MsG0180003303.01.T01:CDS
GGCAATGGCGTTGAGGGAAT+TGG 0.254810 1:-60244136 MsG0180003303.01.T01:CDS
GCTTGGGGTTTCCGCGGTTT+TGG 0.260225 1:-60244508 MsG0180003303.01.T01:CDS
GTGAAAATTGTTAAAGTTCA+TGG 0.268964 1:-60244282 MsG0180003303.01.T01:CDS
TGAATTGCGAGAAACTCTTA+TGG 0.273622 1:-60242794 MsG0180003303.01.T01:CDS
GAGAGAGACAAACAGGGTTT+AGG 0.276966 1:+60244895 None:intergenic
TTCATCTAGGGTTAGGAATT+CGG 0.280796 1:+60244710 None:intergenic
GAATCTGTTGATATTGTTCT+TGG 0.299646 1:-60238454 MsG0180003303.01.T01:CDS
GTTGAATCATAGAAAGTTAC+TGG 0.300163 1:-60241473 MsG0180003303.01.T01:CDS
TCGGGTCTCGGTGAAATCTT+TGG 0.300184 1:-60244051 MsG0180003303.01.T01:CDS
TCATCTAGGGTTAGGAATTC+GGG 0.301535 1:+60244711 None:intergenic
TAAAATCACCTTAGGGATCT+TGG 0.302295 1:+60243576 None:intergenic
CGATAAACTGTTGAGTGAAT+AGG 0.304075 1:+60244949 None:intergenic
CTCTTCGTCGAATCGAAAAC+TGG 0.307063 1:+60244587 None:intergenic
AGAGGTCTTGATTATTATAC+TGG 0.307339 1:-60240302 MsG0180003303.01.T01:CDS
AATTGACAACAAATTACTTT+TGG 0.309741 1:+60244092 None:intergenic
GAAACTCTTATGGGAAAATA+TGG 0.310245 1:-60242784 MsG0180003303.01.T01:CDS
ACGAGTGTGCGGCGTTGCTT+GGG 0.320606 1:-60244524 MsG0180003303.01.T01:CDS
AACGAGTGTGCGGCGTTGCT+TGG 0.330273 1:-60244525 MsG0180003303.01.T01:CDS
ATCCATGGCTAAAAGTCTTT+TGG 0.334463 1:+60238563 None:intergenic
CTTAATGGATCTAAGTTTGT+TGG 0.336591 1:-60244327 MsG0180003303.01.T01:CDS
TGTTTGTCTCTCTCGCAAAA+TGG 0.340168 1:-60244886 MsG0180003303.01.T01:exon
AAGGAGGAAGTTGGTGTTGC+TGG 0.340439 1:-60244366 MsG0180003303.01.T01:CDS
CAATGTGACTTTGATATTGC+TGG 0.341855 1:-60242311 MsG0180003303.01.T01:CDS
TTCGATCTTGGCGTTGCTTA+AGG 0.343576 1:-60243761 MsG0180003303.01.T01:CDS
TTCGGTAGACTTTAGCTATC+TGG 0.352140 1:+60242372 None:intergenic
ATTCTAACAACCTCAAAATC+TGG 0.356532 1:+60242269 None:intergenic
AGAGAGACAAACAGGGTTTA+GGG 0.356542 1:+60244896 None:intergenic
ATGAAAAGATTGGAAATGTT+CGG 0.358192 1:-60243849 MsG0180003303.01.T01:CDS
AACAATATCCCTATGCTGAT+TGG 0.359381 1:-60238499 MsG0180003303.01.T01:CDS
TTTGCGGAAATTGGAGAGTT+GGG 0.359469 1:-60243701 MsG0180003303.01.T01:CDS
GATTTATGATCTTGCTGATC+AGG 0.370898 1:-60242746 MsG0180003303.01.T01:intron
CATGAAATCAATGTGTTGTT+TGG 0.376117 1:-60243940 MsG0180003303.01.T01:CDS
GATGCGGGTTGAGTTGAATT+CGG 0.381314 1:-60244223 MsG0180003303.01.T01:CDS
TGAAAAGATTGGAAATGTTC+GGG 0.384406 1:-60243848 MsG0180003303.01.T01:CDS
GAGCTCTGAATAAAATTTCC+AGG 0.385066 1:+60240375 None:intergenic
GTGTCCAACTGATGCTAGTT+TGG 0.386260 1:-60244022 MsG0180003303.01.T01:CDS
GTGGAGAGCTCTGTTCTTTG+AGG 0.387870 1:-60242460 MsG0180003303.01.T01:CDS
TGGTAGCGATGATTTGAAAT+CGG 0.389582 1:-60244070 MsG0180003303.01.T01:CDS
GCTGAGACAGCTGACAGAAT+TGG 0.393002 1:-60240503 MsG0180003303.01.T01:CDS
GAATTGCGAGAAACTCTTAT+GGG 0.394526 1:-60242793 MsG0180003303.01.T01:CDS
ATGAAATCAATGTGTTGTTT+GGG 0.400022 1:-60243939 MsG0180003303.01.T01:CDS
CTTTAGATGGGTTGTCCCTT+CGG 0.401007 1:+60242354 None:intergenic
TGAAAATTGTTAAAGTTCAT+GGG 0.401175 1:-60244281 MsG0180003303.01.T01:CDS
AAAAGTAATTTGTTGTCAAT+TGG 0.401444 1:-60244090 MsG0180003303.01.T01:CDS
GCTAGATTTGTAGCTATGAA+TGG 0.403216 1:-60242416 MsG0180003303.01.T01:CDS
CGGTGAGGCATTCTTTGCTC+AGG 0.404282 1:+60238410 None:intergenic
TGCTTGATGAGCTGAACATT+GGG 0.405566 1:-60242235 MsG0180003303.01.T01:CDS
TCCTTTGGCAATGGCGTTGA+GGG 0.405634 1:-60244142 MsG0180003303.01.T01:CDS
TTAAAGTTCATGGGGTTATG+AGG 0.405693 1:-60244272 MsG0180003303.01.T01:CDS
ATGCGGGTTGAGTTGAATTC+GGG 0.408913 1:-60244222 MsG0180003303.01.T01:CDS
TTGAATTCGGGACATAAGTT+GGG 0.409138 1:-60244210 MsG0180003303.01.T01:CDS
GTGTGATGTGTTGTTTCCTT+TGG 0.414975 1:-60244157 MsG0180003303.01.T01:CDS
GCTGATTTGAATGAAAAGAT+TGG 0.418490 1:-60243859 MsG0180003303.01.T01:CDS
AAAATCACCTTAGGGATCTT+GGG 0.423985 1:+60243577 None:intergenic
GCAATGGCGTTGAGGGAATT+GGG 0.424124 1:-60244135 MsG0180003303.01.T01:CDS
TCCTGTGGCGGTGGCGTAGA+CGG 0.424422 1:+60244812 None:intergenic
AGGATGGTGGTGAGGTTAAT+CGG 0.427546 1:+60244754 None:intergenic
TGGTGATGGACATAGTTCTA+AGG 0.428148 1:-60244385 MsG0180003303.01.T01:CDS
CATATAGTTCTAAACTTCTC+AGG 0.429885 1:+60241421 None:intergenic
ACAATATCCCTATGCTGATT+GGG 0.429998 1:-60238498 MsG0180003303.01.T01:CDS
CGCGAATTTCATCTAGGGTT+AGG 0.430469 1:+60244703 None:intergenic
AGTTGGGGAAATTGGATCTT+GGG 0.430935 1:-60244194 MsG0180003303.01.T01:CDS
CGGGTCTCGGTGAAATCTTT+GGG 0.436415 1:-60244050 MsG0180003303.01.T01:CDS
TGAACAGATAAGAAAAGAAA+TGG 0.440667 1:-60241365 MsG0180003303.01.T01:intron
GGAAGGCGCGAATTTCATCT+AGG 0.445208 1:+60244697 None:intergenic
ATCAATCAGCGGGTTTGTTA+GGG 0.445914 1:-60244482 MsG0180003303.01.T01:CDS
GCTTGTGATTCTTCATCAAC+CGG 0.450909 1:+60238634 None:intergenic
CACGGTATCTTCCTTTAGAT+GGG 0.451775 1:+60242342 None:intergenic
ATTTGCGGAAATTGGAGAGT+TGG 0.452819 1:-60243702 MsG0180003303.01.T01:CDS
TGTTCTTGGATGCATGGACT+TGG 0.453331 1:-60238440 MsG0180003303.01.T01:CDS
ATAGCTACAAATCTAGCAAA+TGG 0.455387 1:+60242422 None:intergenic
AGGGTTCAGTTCAGAAATGC+AGG 0.455430 1:+60244915 None:intergenic
TGGATCTAAGTTTGTTGGAA+AGG 0.456790 1:-60244322 MsG0180003303.01.T01:CDS
CGCCGTAACACTCGGCGGCA+AGG 0.459752 1:-60244856 MsG0180003303.01.T01:CDS
TAAATCAAAACGCCTTGATA+AGG 0.460427 1:-60240348 MsG0180003303.01.T01:CDS
ACCCTTGCCGCCGAGTGTTA+CGG 0.463734 1:+60244854 None:intergenic
AAGTTGGGGAAATTGGATCT+TGG 0.464449 1:-60244195 MsG0180003303.01.T01:CDS
AAGCGAAATCGGTGCATTCG+AGG 0.464943 1:-60244245 MsG0180003303.01.T01:CDS
GGTAGCGATGATTTGAAATC+GGG 0.469298 1:-60244069 MsG0180003303.01.T01:CDS
GTTGAATTCGGGACATAAGT+TGG 0.469912 1:-60244211 MsG0180003303.01.T01:CDS
GTTAATCTGAGCAGCAAAGT+TGG 0.472521 1:+60238519 None:intergenic
TTTGTTAGGGTTTGCTGATG+TGG 0.473132 1:-60244469 MsG0180003303.01.T01:CDS
TGATATTGTTCTTGGATGCA+TGG 0.474300 1:-60238446 MsG0180003303.01.T01:CDS
TTAATCTGAGCAGCAAAGTT+GGG 0.475963 1:+60238520 None:intergenic
GAGAGGAACTAGTTCGATCT+TGG 0.477327 1:-60243773 MsG0180003303.01.T01:CDS
GTTTCTCGCAATTCAAAGAC+AGG 0.479367 1:+60242802 None:intergenic
AGTGCTTTCTTAGAAAATGC+TGG 0.480530 1:-60240419 MsG0180003303.01.T01:CDS
GCCGTCTACGCCACCGCCAC+AGG 0.483239 1:-60244813 MsG0180003303.01.T01:CDS
GATGCAATTCAAGTTTATGA+AGG 0.484625 1:-60238476 MsG0180003303.01.T01:CDS
AGTCACATTGATAAAATTCA+CGG 0.491051 1:+60242324 None:intergenic
TATGAGGGAGAAAGCGAAAT+CGG 0.493860 1:-60244256 MsG0180003303.01.T01:CDS
GGCGGTGGCGTAGACGGCGG+AGG 0.494013 1:+60244818 None:intergenic
GATAGTGATATTCTGCTTTG+AGG 0.496041 1:+60244734 None:intergenic
GGGAGCGGTAGTATAACAAC+TGG 0.497728 1:+60238540 None:intergenic
GAGGCATGGTGCCACAGCCT+TGG 0.499195 1:-60242830 MsG0180003303.01.T01:CDS
GCCGTAACACTCGGCGGCAA+GGG 0.505341 1:-60244855 MsG0180003303.01.T01:CDS
CGAAGGGACAACCCATCTAA+AGG 0.507198 1:-60242353 MsG0180003303.01.T01:CDS
TAAAGTTCATGGGGTTATGA+GGG 0.508126 1:-60244271 MsG0180003303.01.T01:CDS
AATTTGATGGATTCTGGTGA+TGG 0.511330 1:-60244399 MsG0180003303.01.T01:CDS
AGAGTGATGTAGAGAATTTG+CGG 0.520456 1:-60243717 MsG0180003303.01.T01:CDS
TGTGTTGTTTCCTTTGGCAA+TGG 0.522917 1:-60244151 MsG0180003303.01.T01:CDS
TTGGTGTTGCTGGTGATATG+AGG 0.526184 1:-60244356 MsG0180003303.01.T01:CDS
TTCCTTTGGCAATGGCGTTG+AGG 0.526856 1:-60244143 MsG0180003303.01.T01:CDS
AATCGGTGCATTCGAGGATG+CGG 0.527933 1:-60244239 MsG0180003303.01.T01:CDS
AGTATAATAATCAAGACCTC+TGG 0.528138 1:+60240304 None:intergenic
CGAGTGTGCGGCGTTGCTTG+GGG 0.528173 1:-60244523 MsG0180003303.01.T01:CDS
CCTCGTGAGCTTAGCTCAGT+TGG 0.528599 1:-60239502 MsG0180003303.01.T01:intron
ATGCTGTAGGTGGAAGAGAA+AGG 0.530345 1:-60240533 MsG0180003303.01.T01:intron
TAGTATAACAACTGGATCCA+TGG 0.532537 1:+60238548 None:intergenic
TTGCTTGATGAGCTGAACAT+TGG 0.534227 1:-60242236 MsG0180003303.01.T01:CDS
ATGGCCTGACATCTTTGAAA+AGG 0.534756 1:-60242397 MsG0180003303.01.T01:CDS
ATCGGTGCATTCGAGGATGC+GGG 0.536101 1:-60244238 MsG0180003303.01.T01:CDS
ATTTGGGTTCTAAGCGGTGG+CGG 0.541767 1:+60238390 None:intergenic
CATAGTTCTAAGGAGGAAGT+TGG 0.543348 1:-60244375 MsG0180003303.01.T01:CDS
AGTCAAATACAACCTTATCA+AGG 0.546616 1:+60240336 None:intergenic
ATGTGTTGTTTGGGCTTGTG+TGG 0.549870 1:-60243930 MsG0180003303.01.T01:CDS
GATGATTTGAAATCGGGTCT+CGG 0.554379 1:-60244063 MsG0180003303.01.T01:CDS
ATTCGAAGCATTAGGAGTAC+CGG 0.558701 1:-60238653 MsG0180003303.01.T01:intron
TTCATTTGGGTTCTAAGCGG+TGG 0.560355 1:+60238387 None:intergenic
GGTTCTAAGCGGTGGCGGTG+AGG 0.562862 1:+60238395 None:intergenic
TCTTGGCGTTGCTTAAGGAA+AGG 0.562932 1:-60243756 MsG0180003303.01.T01:CDS
TCCCTCAACGCCATTGCCAA+AGG 0.563042 1:+60244141 None:intergenic
AATTGCATCCCAATCAGCAT+AGG 0.567910 1:+60238490 None:intergenic
TCTGAAACAGAGAGATATAG+AGG 0.569726 1:+60238592 None:intergenic
TCCGCGCAGACTAAGAATGT+TGG 0.573885 1:-60239529 MsG0180003303.01.T01:intron
CTGCTTTGAGGATGGTGGTG+AGG 0.574468 1:+60244746 None:intergenic
GACAGGTGTATCCAAGGCTG+TGG 0.579031 1:+60242819 None:intergenic
GGTGAGGCATTCTTTGCTCA+GGG 0.579327 1:+60238411 None:intergenic
GAAAATTGTTAAAGTTCATG+GGG 0.580411 1:-60244280 MsG0180003303.01.T01:CDS
GTGATATTCTGCTTTGAGGA+TGG 0.581331 1:+60244738 None:intergenic
TTGTGTGGAAAATTGTGGCG+TGG 0.583231 1:-60243915 MsG0180003303.01.T01:CDS
GTTGAGAAGAACGATGAGGA+AGG 0.585073 1:+60244680 None:intergenic
GAAGGCGCGAATTTCATCTA+GGG 0.585211 1:+60244698 None:intergenic
CTAACCAAACTAGCATCAGT+TGG 0.585403 1:+60244018 None:intergenic
TTCAAAGACAGGTGTATCCA+AGG 0.588118 1:+60242813 None:intergenic
GGCATTGAAGGCTAATGTGA+CGG 0.590171 1:-60244427 MsG0180003303.01.T01:CDS
GAACTCTCCGCCGTAACACT+CGG 0.593765 1:-60244864 MsG0180003303.01.T01:CDS
TGGGCTTGTGTGGAAAATTG+TGG 0.594154 1:-60243920 MsG0180003303.01.T01:CDS
ATTGCATCCCAATCAGCATA+GGG 0.598486 1:+60238491 None:intergenic
AATCATAGAAAGTTACTGGA+TGG 0.599873 1:-60241469 MsG0180003303.01.T01:CDS
GGCGTTGCTTGGGGTTTCCG+CGG 0.603370 1:-60244514 MsG0180003303.01.T01:CDS
TGAATTCGGGACATAAGTTG+GGG 0.603870 1:-60244209 MsG0180003303.01.T01:CDS
AGGGTTTGCTGATGTGGCGG+CGG 0.606817 1:-60244463 MsG0180003303.01.T01:CDS
GGTTAATCGGTCGAGTGCGG+AGG 0.616854 1:+60244767 None:intergenic
CCAACTGAGCTAAGCTCACG+AGG 0.617839 1:+60239502 None:intergenic
CTGAGCAGCAAAGTTGGGAG+CGG 0.619178 1:+60238525 None:intergenic
TGCTTCATTTGGGTTCTAAG+CGG 0.621970 1:+60238384 None:intergenic
TGTGTGGAAAATTGTGGCGT+GGG 0.624758 1:-60243914 MsG0180003303.01.T01:CDS
TGTTGATGCATTGAATGACC+TGG 0.626342 1:-60240393 MsG0180003303.01.T01:CDS
TCTCGGTGAAATCTTTGGGA+AGG 0.626530 1:-60244046 MsG0180003303.01.T01:CDS
GGGTTCAGTTCAGAAATGCA+GGG 0.627664 1:+60244916 None:intergenic
AGATAGCTAAAGTCTACCGA+AGG 0.629390 1:-60242370 MsG0180003303.01.T01:CDS
CATCTAGGGTTAGGAATTCG+GGG 0.632926 1:+60244712 None:intergenic
TGAGGTTAATCGGTCGAGTG+CGG 0.634073 1:+60244764 None:intergenic
AAGATTGCCCAAGATCCCTA+AGG 0.635165 1:-60243584 MsG0180003303.01.T01:intron
AGGCGAGTAACGAGCACTCG+TGG 0.636317 1:+60238612 None:intergenic
GATGGCATGATGCAAATATG+TGG 0.639864 1:-60241451 MsG0180003303.01.T01:CDS
TTTGACTTGAGTCTTGCCAG+AGG 0.641980 1:-60240320 MsG0180003303.01.T01:CDS
ATATTCTGCTTTGAGGATGG+TGG 0.642392 1:+60244741 None:intergenic
GTTAGGGTTTGCTGATGTGG+CGG 0.654312 1:-60244466 MsG0180003303.01.T01:CDS
GTTTGTTGAGAAGAACGATG+AGG 0.658497 1:+60244676 None:intergenic
TGATGGACATAGTTCTAAGG+AGG 0.659094 1:-60244382 MsG0180003303.01.T01:CDS
TGTGGCGGTGGCGTAGACGG+CGG 0.660194 1:+60244815 None:intergenic
GACTGCTTATGCTGTACTCG+AGG 0.664600 1:-60243884 MsG0180003303.01.T01:CDS
CTTGCCGCCGAGTGTTACGG+CGG 0.669433 1:+60244857 None:intergenic
TGGAAAGGAAAGTGTTCCTG+AGG 0.675831 1:-60244307 MsG0180003303.01.T01:CDS
GCTTGATGAGCTGAACATTG+GGG 0.679569 1:-60242234 MsG0180003303.01.T01:CDS
GTTGATGAACAACGAGTGTG+CGG 0.691627 1:-60244535 MsG0180003303.01.T01:CDS
ATAGTTCTAAACTTCTCAGG+AGG 0.693927 1:+60241424 None:intergenic
GATAGCTAAAGTCTACCGAA+GGG 0.701457 1:-60242369 MsG0180003303.01.T01:CDS
CTCTCCGCCGTAACACTCGG+CGG 0.746601 1:-60244861 MsG0180003303.01.T01:CDS
TGATTGATGATCCAAAACCG+CGG 0.764436 1:+60244497 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAGATTAATTAAATTAA+TGG - Chr1:60243485-60243504 MsG0180003303.01.T01:intron 10.0%
!! AAATCTAAATTGTTAATATT+AGG - Chr1:60242728-60242747 MsG0180003303.01.T01:intron 10.0%
!! ATATAATTTGAATACATTAT+TGG + Chr1:60241796-60241815 None:intergenic 10.0%
!! CATAATAAAATTAATTACAA+AGG + Chr1:60242034-60242053 None:intergenic 10.0%
!! TTAAAATGAATGATATTATA+AGG + Chr1:60241722-60241741 None:intergenic 10.0%
!!! TTAATTTTATTATGATTGAA+CGG - Chr1:60242040-60242059 MsG0180003303.01.T01:intron 10.0%
!!! TTTAAAACATGTTTTTTTTT+TGG - Chr1:60243266-60243285 MsG0180003303.01.T01:intron 10.0%
!! AAATTATATAACAAATAAGC+TGG + Chr1:60241587-60241606 None:intergenic 15.0%
!! AACTTAACTATTTCATAAAT+TGG + Chr1:60240005-60240024 None:intergenic 15.0%
!! AATAAAAATTCATTGAATTC+AGG + Chr1:60239705-60239724 None:intergenic 15.0%
!! AATTATATAACAAATAAGCT+GGG + Chr1:60241586-60241605 None:intergenic 15.0%
!! ATATGACTTAAGATTTAAAT+TGG + Chr1:60243516-60243535 None:intergenic 15.0%
!! ATTGTTAAAATCATATTTCA+AGG - Chr1:60240222-60240241 MsG0180003303.01.T01:intron 15.0%
!! TAAAAACTAAATCCTAATTT+AGG + Chr1:60243721-60243740 None:intergenic 15.0%
!!! AATTAGGATTTAGTTTTTAA+TGG - Chr1:60243722-60243741 MsG0180003303.01.T01:CDS 15.0%
!!! AATTTCTACTAGATTTATTT+TGG + Chr1:60244060-60244079 None:intergenic 15.0%
!!! TGAATTTTTATTGAAAGTAA+AGG - Chr1:60239713-60239732 MsG0180003303.01.T01:intron 15.0%
!!! TGATTTTATTGATTCTTTTA+GGG - Chr1:60239784-60239803 MsG0180003303.01.T01:intron 15.0%
!! AGATTATGATTATTAAAGAC+TGG + Chr1:60244137-60244156 None:intergenic 20.0%
!! ATCAACTTTATCTATAGATT+TGG + Chr1:60240822-60240841 None:intergenic 20.0%
!! ATGAAGTTAAACATTGTTAA+TGG - Chr1:60243609-60243628 MsG0180003303.01.T01:CDS 20.0%
!! ATTAAATTCCATCTAATAGA+CGG - Chr1:60244077-60244096 MsG0180003303.01.T01:CDS 20.0%
!! ATTATTACTTATTCACTTCT+TGG - Chr1:60240623-60240642 MsG0180003303.01.T01:intron 20.0%
!! ATTTATATTAGTATATGTGC+TGG - Chr1:60241309-60241328 MsG0180003303.01.T01:intron 20.0%
!! ATTTCTTATCTTTAGTAATG+TGG - Chr1:60242774-60242793 MsG0180003303.01.T01:CDS 20.0%
!! TAAAAAACCATTCATTAGAA+GGG - Chr1:60239945-60239964 MsG0180003303.01.T01:intron 20.0%
!! TAAATTATAGCAGATAAGTT+TGG + Chr1:60241698-60241717 None:intergenic 20.0%
!! TGAAAATTGTTAAAGTTCAT+GGG - Chr1:60239064-60239083 MsG0180003303.01.T01:intron 20.0%
!! TTAAAAAACCATTCATTAGA+AGG - Chr1:60239944-60239963 MsG0180003303.01.T01:intron 20.0%
!! TTTATATTAGTATATGTGCT+GGG - Chr1:60241310-60241329 MsG0180003303.01.T01:intron 20.0%
!! TTTATCAATGGTAAATAGTT+TGG - Chr1:60242162-60242181 MsG0180003303.01.T01:intron 20.0%
!!! AAAAGTAATTTGTTGTCAAT+TGG - Chr1:60239255-60239274 MsG0180003303.01.T01:intron 20.0%
!!! AATTGACAACAAATTACTTT+TGG + Chr1:60239256-60239275 None:intergenic 20.0%
!!! ACATAAGCTTTAGATTTTTT+AGG - Chr1:60243542-60243561 MsG0180003303.01.T01:intron 20.0%
!!! ATATTTGAAGCTGTTTTTAA+AGG - Chr1:60243070-60243089 MsG0180003303.01.T01:intron 20.0%
!!! ATTTTCAATGATTGAATATG+CGG + Chr1:60243964-60243983 None:intergenic 20.0%
!!! GTAATTTTTTTTTGTTTCAC+AGG - Chr1:60241845-60241864 MsG0180003303.01.T01:intron 20.0%
!!! GTGATTTTATTGATTCTTTT+AGG - Chr1:60239783-60239802 MsG0180003303.01.T01:intron 20.0%
!!! TAATTAAAAGTTGCTACTTT+TGG - Chr1:60242620-60242639 MsG0180003303.01.T01:intron 20.0%
!!! TATTTGAAGCTGTTTTTAAA+GGG - Chr1:60243071-60243090 MsG0180003303.01.T01:intron 20.0%
!!! TGAGTTGATTTTAAGAATAT+TGG - Chr1:60240651-60240670 MsG0180003303.01.T01:intron 20.0%
!!! TTTTACATTTTGAAAGATGT+AGG - Chr1:60242096-60242115 MsG0180003303.01.T01:intron 20.0%
! AAACTAAATCCTAATTTAGG+AGG + Chr1:60243718-60243737 None:intergenic 25.0%
! AAATGCATTATTATATGCAG+GGG + Chr1:60243364-60243383 None:intergenic 25.0%
! AAATGTATATGTGAAGTAAC+CGG + Chr1:60242274-60242293 None:intergenic 25.0%
! AAGCTTGTATCATATCATTA+TGG - Chr1:60240036-60240055 MsG0180003303.01.T01:intron 25.0%
! AGAATCAATAAAATCACCTT+AGG + Chr1:60239780-60239799 None:intergenic 25.0%
! AGGTAAGAAAATGTGATTTA+AGG - Chr1:60243655-60243674 MsG0180003303.01.T01:CDS 25.0%
! AGTCACATTGATAAAATTCA+CGG + Chr1:60241024-60241043 None:intergenic 25.0%
! AGTTTCGATAACAATGTTAA+AGG + Chr1:60242893-60242912 None:intergenic 25.0%
! ATGAAAAGATTGGAAATGTT+CGG - Chr1:60239496-60239515 MsG0180003303.01.T01:intron 25.0%
! CATAGTTTATGCTTTATCAA+TGG - Chr1:60242150-60242169 MsG0180003303.01.T01:intron 25.0%
! CATTTAACAATATCACTGAA+AGG + Chr1:60241547-60241566 None:intergenic 25.0%
! CTAACACAAGATATAATGAA+AGG - Chr1:60243403-60243422 MsG0180003303.01.T01:intron 25.0%
! CTCACAATATGAAAATATCA+GGG - Chr1:60240420-60240439 MsG0180003303.01.T01:CDS 25.0%
! GAAAATTGTTAAAGTTCATG+GGG - Chr1:60239065-60239084 MsG0180003303.01.T01:intron 25.0%
! GAAATGCATTATTATATGCA+GGG + Chr1:60243365-60243384 None:intergenic 25.0%
! GAATCAATAAAATCACCTTA+GGG + Chr1:60239779-60239798 None:intergenic 25.0%
! GTGAAAATTGTTAAAGTTCA+TGG - Chr1:60239063-60239082 MsG0180003303.01.T01:intron 25.0%
! TACCTATTTAGAAAAGATGA+AGG - Chr1:60244033-60244052 MsG0180003303.01.T01:CDS 25.0%
! TAGAAAAACCCTATTCTAAA+AGG + Chr1:60242492-60242511 None:intergenic 25.0%
! TATAGTTGCATGATTTATTG+AGG - Chr1:60242231-60242250 MsG0180003303.01.T01:CDS 25.0%
! TATATGTTAATTTCTGTTCC+TGG - Chr1:60240362-60240381 MsG0180003303.01.T01:CDS 25.0%
! TATTTACCAAAAGAATGCTA+AGG + Chr1:60242213-60242232 None:intergenic 25.0%
! TCAAAATAGTAAGTTTGCAT+TGG - Chr1:60242542-60242561 MsG0180003303.01.T01:intron 25.0%
! TCAAATATATTGCATTACAC+TGG - Chr1:60242435-60242454 MsG0180003303.01.T01:CDS 25.0%
! TCCAAATGAATGACATTAAA+AGG + Chr1:60241612-60241631 None:intergenic 25.0%
! TCTCACAATATGAAAATATC+AGG - Chr1:60240419-60240438 MsG0180003303.01.T01:CDS 25.0%
! TGAACAGATAAGAAAAGAAA+TGG - Chr1:60241980-60241999 MsG0180003303.01.T01:intron 25.0%
! TTAAACCAACTTGAGAAAAT+GGG + Chr1:60243251-60243270 None:intergenic 25.0%
! TTTAAACCAACTTGAGAAAA+TGG + Chr1:60243252-60243271 None:intergenic 25.0%
! TTTAGGGATGAAATTTAAGT+TGG - Chr1:60242185-60242204 MsG0180003303.01.T01:intron 25.0%
!! AAATCTAAAGCTTATGTTGT+CGG + Chr1:60243539-60243558 None:intergenic 25.0%
!! AATGGTAAATAGTTTGGTTT+AGG - Chr1:60242168-60242187 MsG0180003303.01.T01:intron 25.0%
!! ACCTTTTAATGTCATTCATT+TGG - Chr1:60241608-60241627 MsG0180003303.01.T01:intron 25.0%
!! ACTGTACTTTTCTAATTTAG+CGG - Chr1:60241757-60241776 MsG0180003303.01.T01:intron 25.0%
!! ATCTGAAATGCCATATTTAT+CGG - Chr1:60241364-60241383 MsG0180003303.01.T01:intron 25.0%
!! ATGGTAAATAGTTTGGTTTA+GGG - Chr1:60242169-60242188 MsG0180003303.01.T01:intron 25.0%
!! TAGGTAAATGTTAGTCATTT+TGG + Chr1:60244019-60244038 None:intergenic 25.0%
!!! ATCATTCATTTTAATGTGTC+TGG - Chr1:60241728-60241747 MsG0180003303.01.T01:intron 25.0%
!!! ATGAAATCAATGTGTTGTTT+GGG - Chr1:60239406-60239425 MsG0180003303.01.T01:intron 25.0%
!!! ATTTGAAGCTGTTTTTAAAG+GGG - Chr1:60243072-60243091 MsG0180003303.01.T01:intron 25.0%
!!! GAATCTTTTAAGTTGTATTC+TGG - Chr1:60239360-60239379 MsG0180003303.01.T01:intron 25.0%
!!! TAACTTTATCACTTTTTTCG+TGG - Chr1:60239847-60239866 MsG0180003303.01.T01:intron 25.0%
!!! TCTATAACCGTTATTTTTCA+TGG - Chr1:60241235-60241254 MsG0180003303.01.T01:intron 25.0%
!!! TTCATTTTTGAGCAAATATC+TGG - Chr1:60242308-60242327 MsG0180003303.01.T01:CDS 25.0%
!!! TTTTAAGTTGTATTCTGGTA+GGG - Chr1:60239365-60239384 MsG0180003303.01.T01:intron 25.0%
AAATACTTCTCAAAACGAGA+AGG + Chr1:60244346-60244365 None:intergenic 30.0%
AACATTGTTAATGGTTTGAG+CGG - Chr1:60243618-60243637 MsG0180003303.01.T01:CDS 30.0%
AACTCTTACCTCATGTAATT+TGG - Chr1:60240264-60240283 MsG0180003303.01.T01:intron 30.0%
AACTTCATAATCTTTCGTAC+AGG + Chr1:60243597-60243616 None:intergenic 30.0%
AATCATAGAAAGTTACTGGA+TGG - Chr1:60241876-60241895 MsG0180003303.01.T01:intron 30.0%
AATGTTACAACGAATTGTGT+CGG + Chr1:60242695-60242714 None:intergenic 30.0%
AATTTAAGTAAGAGCTGACT+TGG - Chr1:60243756-60243775 MsG0180003303.01.T01:CDS 30.0%
ACATGATCAGAAATATCAGA+AGG + Chr1:60240743-60240762 None:intergenic 30.0%
ACGATGCTTAAAAATATGCA+AGG - Chr1:60243871-60243890 MsG0180003303.01.T01:CDS 30.0%
AGACAGACCATGAAAAATAA+CGG + Chr1:60241245-60241264 None:intergenic 30.0%
AGAGGTCTTGATTATTATAC+TGG - Chr1:60243043-60243062 MsG0180003303.01.T01:intron 30.0%
AGATAAGAAAAGAAATGGTG+AGG - Chr1:60241985-60242004 MsG0180003303.01.T01:intron 30.0%
AGTATAATAATCAAGACCTC+TGG + Chr1:60243044-60243063 None:intergenic 30.0%
AGTCAAATACAACCTTATCA+AGG + Chr1:60243012-60243031 None:intergenic 30.0%
AGTCACATTTAACAAGATCA+TGG + Chr1:60241664-60241683 None:intergenic 30.0%
ATAGCTACAAATCTAGCAAA+TGG + Chr1:60240926-60240945 None:intergenic 30.0%
ATTCTAACAACCTCAAAATC+TGG + Chr1:60241079-60241098 None:intergenic 30.0%
CAAAAATCATTATATCTGCC+CGG - Chr1:60243175-60243194 MsG0180003303.01.T01:intron 30.0%
CATCACCAAAAAAAAGATAC+TGG - Chr1:60243914-60243933 MsG0180003303.01.T01:CDS 30.0%
CCGAGATATTAACTTTAATC+CGG - Chr1:60243565-60243584 MsG0180003303.01.T01:intron 30.0%
CCGGATTAAAGTTAATATCT+CGG + Chr1:60243568-60243587 None:intergenic 30.0%
CTCAAAACACAAGTTCAAAA+AGG + Chr1:60240300-60240319 None:intergenic 30.0%
CTTAAAAATATGCAAGGTTC+GGG - Chr1:60243877-60243896 MsG0180003303.01.T01:CDS 30.0%
GAAACTCTTATGGGAAAATA+TGG - Chr1:60240561-60240580 MsG0180003303.01.T01:intron 30.0%
GAATCTGTTGATATTGTTCT+TGG - Chr1:60244891-60244910 MsG0180003303.01.T01:five_prime_UTR 30.0%
GATAAGAAAAGAAATGGTGA+GGG - Chr1:60241986-60242005 MsG0180003303.01.T01:intron 30.0%
GCTTAAAAATATGCAAGGTT+CGG - Chr1:60243876-60243895 MsG0180003303.01.T01:CDS 30.0%
GGAAATGCATTATTATATGC+AGG + Chr1:60243366-60243385 None:intergenic 30.0%
GGCATAATTATTGTCTCAAT+TGG + Chr1:60243943-60243962 None:intergenic 30.0%
GTCACATTTAACAAGATCAT+GGG + Chr1:60241663-60241682 None:intergenic 30.0%
GTGATATTGTTAAATGTGAC+TGG - Chr1:60241551-60241570 MsG0180003303.01.T01:intron 30.0%
GTTGAATCATAGAAAGTTAC+TGG - Chr1:60241872-60241891 MsG0180003303.01.T01:intron 30.0%
TAAATCAAAACGCCTTGATA+AGG - Chr1:60242997-60243016 MsG0180003303.01.T01:intron 30.0%
TACAGATTACCTCCTAAATT+AGG - Chr1:60243706-60243725 MsG0180003303.01.T01:CDS 30.0%
TCAACACAACTTATTTACAC+CGG - Chr1:60244563-60244582 MsG0180003303.01.T01:CDS 30.0%
TCCAACATTTGAAAACATAC+AGG + Chr1:60242362-60242381 None:intergenic 30.0%
TGAAAAGATTGGAAATGTTC+GGG - Chr1:60239497-60239516 MsG0180003303.01.T01:intron 30.0%
TTAAAAATATGCAAGGTTCG+GGG - Chr1:60243878-60243897 MsG0180003303.01.T01:CDS 30.0%
TTAGTTCCTTCATTCTTTGT+GGG - Chr1:60243151-60243170 MsG0180003303.01.T01:intron 30.0%
TTTGCTCAAAAATGAAGACA+CGG + Chr1:60242304-60242323 None:intergenic 30.0%
! ACCTGTATGTTTTCAAATGT+TGG - Chr1:60242358-60242377 MsG0180003303.01.T01:CDS 30.0%
! AGGATTAACAGTTCTTTTTC+TGG - Chr1:60243423-60243442 MsG0180003303.01.T01:intron 30.0%
! ATGACAAAGACTTGATAACA+AGG + Chr1:60241492-60241511 None:intergenic 30.0%
! CATGAAATCAATGTGTTGTT+TGG - Chr1:60239405-60239424 MsG0180003303.01.T01:intron 30.0%
! CTTAATGGATCTAAGTTTGT+TGG - Chr1:60239018-60239037 MsG0180003303.01.T01:intron 30.0%
! CTTTTTCTGGATTAAACCAA+AGG - Chr1:60243436-60243455 MsG0180003303.01.T01:intron 30.0%
! CTTTTTGAACTTGTGTTTTG+AGG - Chr1:60240298-60240317 MsG0180003303.01.T01:CDS 30.0%
! GATATGAGGATTTTGCTTAA+TGG - Chr1:60239003-60239022 MsG0180003303.01.T01:intron 30.0%
! GATGCAATTCAAGTTTATGA+AGG - Chr1:60244869-60244888 MsG0180003303.01.T01:CDS 30.0%
! GGAACTTTTGTTAAAGAGAA+AGG - Chr1:60242863-60242882 MsG0180003303.01.T01:CDS 30.0%
! GTCCTTCATCTTTTCTAAAT+AGG + Chr1:60244038-60244057 None:intergenic 30.0%
! TGGTCTGTCTATATGTATTT+TGG - Chr1:60241255-60241274 MsG0180003303.01.T01:intron 30.0%
! TTAACAATTTTCACAACCTC+AGG + Chr1:60239057-60239076 None:intergenic 30.0%
! TTTAGTTCCTTCATTCTTTG+TGG - Chr1:60243150-60243169 MsG0180003303.01.T01:intron 30.0%
! TTTTCATATTGTGAGACTCA+AGG + Chr1:60240415-60240434 None:intergenic 30.0%
!! AAACCAATACTTTTTGTAGC+AGG + Chr1:60241163-60241182 None:intergenic 30.0%
!! AACCAATACTTTTTGTAGCA+GGG + Chr1:60241162-60241181 None:intergenic 30.0%
!! AAGAAGAAGAAAGCTGTTTT+GGG - Chr1:60239549-60239568 MsG0180003303.01.T01:intron 30.0%
!! CATATAGTTCTAAACTTCTC+AGG + Chr1:60241927-60241946 None:intergenic 30.0%
!! GCTGATTTGAATGAAAAGAT+TGG - Chr1:60239486-60239505 MsG0180003303.01.T01:intron 30.0%
!! TGATAGAAGAAGTTTTTGAG+AGG - Chr1:60240496-60240515 MsG0180003303.01.T01:CDS 30.0%
!!! CAGTATCTTTTTTTTGGTGA+TGG + Chr1:60243916-60243935 None:intergenic 30.0%
!!! CTTTTAAGTTGTATTCTGGT+AGG - Chr1:60239364-60239383 MsG0180003303.01.T01:intron 30.0%
!!! CTTTTTCAAGGTGAATAAGT+GGG - Chr1:60243316-60243335 MsG0180003303.01.T01:intron 30.0%
!!! GTTTTCAATTTGATGGATTC+TGG - Chr1:60238940-60238959 MsG0180003303.01.T01:intron 30.0%
!!! TGACTTGGTTTTTGATGATT+TGG - Chr1:60243771-60243790 MsG0180003303.01.T01:CDS 30.0%
!!! TTTGAAGCTGTTTTTAAAGG+GGG - Chr1:60243073-60243092 MsG0180003303.01.T01:intron 30.0%
!!! TTTGATTTGAGATTTTCCTG+TGG + Chr1:60238551-60238570 None:intergenic 30.0%
!!! TTTTTCAAGGTGAATAAGTG+GGG - Chr1:60243317-60243336 MsG0180003303.01.T01:intron 30.0%
AAAATCACCTTAGGGATCTT+GGG + Chr1:60239771-60239790 None:intergenic 35.0%
AAACCCATATAACCAAGGAT+TGG + Chr1:60243682-60243701 None:intergenic 35.0%
AAAGGTGAATTCTAGCCATT+AGG + Chr1:60243300-60243319 None:intergenic 35.0%
AACAATATCCCTATGCTGAT+TGG - Chr1:60244846-60244865 MsG0180003303.01.T01:CDS 35.0%
AATGGAGTCGTGAAAAGAAA+GGG + Chr1:60244598-60244617 None:intergenic 35.0%
ACAATACTCAGAAGGACAAA+TGG + Chr1:60244486-60244505 None:intergenic 35.0%
ACAGAAAACCCATATAACCA+AGG + Chr1:60243687-60243706 None:intergenic 35.0%
AGAGTGATGTAGAGAATTTG+CGG - Chr1:60239628-60239647 MsG0180003303.01.T01:intron 35.0%
AGTGAGTTACAATACTCAGA+AGG + Chr1:60244494-60244513 None:intergenic 35.0%
AGTGCTTTCTTAGAAAATGC+TGG - Chr1:60242926-60242945 MsG0180003303.01.T01:intron 35.0%
ATGAATCTTTCAGCATCACT+TGG - Chr1:60244206-60244225 MsG0180003303.01.T01:CDS 35.0%
ATTGGAAATGTTCGGGAAAA+TGG - Chr1:60239504-60239523 MsG0180003303.01.T01:CDS 35.0%
CAATGTGACTTTGATATTGC+TGG - Chr1:60241034-60241053 MsG0180003303.01.T01:intron 35.0%
CAGCTTAAGCACAACAAAAT+TGG + Chr1:60242067-60242086 None:intergenic 35.0%
CCACTTATTCACCTTGAAAA+AGG + Chr1:60243318-60243337 None:intergenic 35.0%
CTCACAAAAGGAAAAGGAAA+AGG + Chr1:60244377-60244396 None:intergenic 35.0%
GAATTGCGAGAAACTCTTAT+GGG - Chr1:60240552-60240571 MsG0180003303.01.T01:intron 35.0%
GAATTTCAGCTCATTCTAAC+TGG - Chr1:60240842-60240861 MsG0180003303.01.T01:intron 35.0%
GAGCTTTCACACTCAAAATA+AGG - Chr1:60243458-60243477 MsG0180003303.01.T01:intron 35.0%
GATAGTGATATTCTGCTTTG+AGG + Chr1:60238614-60238633 None:intergenic 35.0%
GATTTATGATCTTGCTGATC+AGG - Chr1:60240599-60240618 MsG0180003303.01.T01:intron 35.0%
GCTAGATTTGTAGCTATGAA+TGG - Chr1:60240929-60240948 MsG0180003303.01.T01:intron 35.0%
GCTGAAAGATTCATCTATGT+GGG + Chr1:60244200-60244219 None:intergenic 35.0%
GGCACATGTTCAATATGAAA+AGG + Chr1:60243998-60244017 None:intergenic 35.0%
GGTAATCTACTTGTTTGACA+GGG - Chr1:60240863-60240882 MsG0180003303.01.T01:intron 35.0%
GTTAATTTCTGTTCCTGGTT+GGG - Chr1:60240367-60240386 MsG0180003303.01.T01:CDS 35.0%
TAAAATCACCTTAGGGATCT+TGG + Chr1:60239772-60239791 None:intergenic 35.0%
TAAAGTTCATGGGGTTATGA+GGG - Chr1:60239074-60239093 MsG0180003303.01.T01:intron 35.0%
TACTAGCTCACAAAAGGAAA+AGG + Chr1:60244383-60244402 None:intergenic 35.0%
TAGTATAACAACTGGATCCA+TGG + Chr1:60244800-60244819 None:intergenic 35.0%
TAGTTCCTTCATTCTTTGTG+GGG - Chr1:60243152-60243171 MsG0180003303.01.T01:intron 35.0%
TATAAACCAGACCGACATTA+AGG - Chr1:60240785-60240804 MsG0180003303.01.T01:intron 35.0%
TCAATTATCAGATTACCTGC+TGG - Chr1:60241513-60241532 MsG0180003303.01.T01:intron 35.0%
TGAATTGCGAGAAACTCTTA+TGG - Chr1:60240551-60240570 MsG0180003303.01.T01:intron 35.0%
TGATATTGTTCTTGGATGCA+TGG - Chr1:60244899-60244918 MsG0180003303.01.T01:five_prime_UTR 35.0%
TGCTGAAAGATTCATCTATG+TGG + Chr1:60244201-60244220 None:intergenic 35.0%
TGGTAATCTACTTGTTTGAC+AGG - Chr1:60240862-60240881 MsG0180003303.01.T01:intron 35.0%
TGTAGAGAATTTGCGGAAAT+TGG - Chr1:60239635-60239654 MsG0180003303.01.T01:intron 35.0%
TGTGTCGGACATATTCTAAA+GGG + Chr1:60242680-60242699 None:intergenic 35.0%
TGTTAATTTCTGTTCCTGGT+TGG - Chr1:60240366-60240385 MsG0180003303.01.T01:CDS 35.0%
TGTTTCATCTGCAAGAAAAC+AGG + Chr1:60244300-60244319 None:intergenic 35.0%
TTAAAGTTCATGGGGTTATG+AGG - Chr1:60239073-60239092 MsG0180003303.01.T01:intron 35.0%
TTAATCTGAGCAGCAAAGTT+GGG + Chr1:60244828-60244847 None:intergenic 35.0%
TTGAATTCGGGACATAAGTT+GGG - Chr1:60239135-60239154 MsG0180003303.01.T01:intron 35.0%
TTGTGTCGGACATATTCTAA+AGG + Chr1:60242681-60242700 None:intergenic 35.0%
TTTCTTGCAGATGAAACATG+TGG - Chr1:60244302-60244321 MsG0180003303.01.T01:CDS 35.0%
TTTGAGCGGTCAAGATAAAT+AGG - Chr1:60243632-60243651 MsG0180003303.01.T01:CDS 35.0%
! AAAAATGGCTCCAGATTTTG+AGG - Chr1:60241066-60241085 MsG0180003303.01.T01:intron 35.0%
! AATCGCTAATGCAACGTTTT+TGG + Chr1:60238713-60238732 None:intergenic 35.0%
! ACAATATCCCTATGCTGATT+GGG - Chr1:60244847-60244866 MsG0180003303.01.T01:CDS 35.0%
! ATAATTTGCAGAGCATCTGT+AGG + Chr1:60240127-60240146 None:intergenic 35.0%
! ATCCATGGCTAAAAGTCTTT+TGG + Chr1:60244785-60244804 None:intergenic 35.0%
! GAAGAAGAAGAAAGCTGTTT+TGG - Chr1:60239548-60239567 MsG0180003303.01.T01:intron 35.0%
! GGAAATTTTATTCAGAGCTC+TGG - Chr1:60242973-60242992 MsG0180003303.01.T01:intron 35.0%
! TACCTCATGTAATTTGGAAC+TGG - Chr1:60240270-60240289 MsG0180003303.01.T01:CDS 35.0%
! TCTGAAACAGAGAGATATAG+AGG + Chr1:60244756-60244775 None:intergenic 35.0%
! TCTTTCGTACAGGAATTTTC+CGG + Chr1:60243587-60243606 None:intergenic 35.0%
! TGGTAGCGATGATTTGAAAT+CGG - Chr1:60239275-60239294 MsG0180003303.01.T01:intron 35.0%
! TGTGACGGTTTTCAATTTGA+TGG - Chr1:60238933-60238952 MsG0180003303.01.T01:intron 35.0%
! TTCATCTAGGGTTAGGAATT+CGG + Chr1:60238638-60238657 None:intergenic 35.0%
!! AATTTGATGGATTCTGGTGA+TGG - Chr1:60238946-60238965 MsG0180003303.01.T01:intron 35.0%
!! AGAAGAAGAAAGCTGTTTTG+GGG - Chr1:60239550-60239569 MsG0180003303.01.T01:intron 35.0%
!! ATAGTTCTAAACTTCTCAGG+AGG + Chr1:60241924-60241943 None:intergenic 35.0%
!! GAGCTCTGAATAAAATTTCC+AGG + Chr1:60242973-60242992 None:intergenic 35.0%
!! GCTAGAATTCACCTTTTTCA+AGG - Chr1:60243304-60243323 MsG0180003303.01.T01:intron 35.0%
!! TGAAGAGTATTCGAAGCATT+AGG - Chr1:60244684-60244703 MsG0180003303.01.T01:CDS 35.0%
!! TGGATCTAAGTTTGTTGGAA+AGG - Chr1:60239023-60239042 MsG0180003303.01.T01:intron 35.0%
!! TTTACTGACTTTCATGCTGT+AGG - Chr1:60242799-60242818 MsG0180003303.01.T01:CDS 35.0%
!! TTTTTGGTCAAGTAGCCTAA+TGG - Chr1:60243282-60243301 MsG0180003303.01.T01:intron 35.0%
!!! AAGTTGCTGCCTTTTAGAAT+AGG - Chr1:60242480-60242499 MsG0180003303.01.T01:intron 35.0%
!!! AGTTGCTGCCTTTTAGAATA+GGG - Chr1:60242481-60242500 MsG0180003303.01.T01:intron 35.0%
!!! ATCTTTTTTTTGGTGATGGC+CGG + Chr1:60243912-60243931 None:intergenic 35.0%
!!! CCTTTTTCAAGGTGAATAAG+TGG - Chr1:60243315-60243334 MsG0180003303.01.T01:intron 35.0%
!!! CTCTTTTAGTTTGACAACCT+TGG - Chr1:60240156-60240175 MsG0180003303.01.T01:intron 35.0%
!!! GGCATCCAGTATCTTTTTTT+TGG + Chr1:60243922-60243941 None:intergenic 35.0%
!!! TGCTGATTTTCTGTCGTTTT+TGG - Chr1:60239668-60239687 MsG0180003303.01.T01:intron 35.0%
!!! TTTTAGTTTGACAACCTTGG+CGG - Chr1:60240159-60240178 MsG0180003303.01.T01:intron 35.0%
AAACCATTCATTAGAAGGGC+TGG - Chr1:60239949-60239968 MsG0180003303.01.T01:intron 40.0%
AAGTTGGGGAAATTGGATCT+TGG - Chr1:60239150-60239169 MsG0180003303.01.T01:intron 40.0%
AATCTACTTGTTTGACAGGG+TGG - Chr1:60240866-60240885 MsG0180003303.01.T01:intron 40.0%
AATTGCATCCCAATCAGCAT+AGG + Chr1:60244858-60244877 None:intergenic 40.0%
AGAGAGACAAACAGGGTTTA+GGG + Chr1:60238452-60238471 None:intergenic 40.0%
AGATAGCTAAAGTCTACCGA+AGG - Chr1:60240975-60240994 MsG0180003303.01.T01:intron 40.0%
AGGTCCAATCCTTGGTTATA+TGG - Chr1:60243675-60243694 MsG0180003303.01.T01:CDS 40.0%
AGTATATGTGCTGGGCTTAT+AGG - Chr1:60241318-60241337 MsG0180003303.01.T01:intron 40.0%
AGTGAACATCCACTATATCC+GGG + Chr1:60243196-60243215 None:intergenic 40.0%
AGTGAGATATAAGCTCATGG+AGG - Chr1:60244458-60244477 MsG0180003303.01.T01:CDS 40.0%
AGTTGGGGAAATTGGATCTT+GGG - Chr1:60239151-60239170 MsG0180003303.01.T01:intron 40.0%
ATGCCATATTTATCGGCATC+AGG - Chr1:60241371-60241390 MsG0180003303.01.T01:CDS 40.0%
ATGTGAAGTAACCGGTTACA+AGG + Chr1:60242266-60242285 None:intergenic 40.0%
ATTGCATCCCAATCAGCATA+GGG + Chr1:60244857-60244876 None:intergenic 40.0%
ATTTGCGGAAATTGGAGAGT+TGG - Chr1:60239643-60239662 MsG0180003303.01.T01:intron 40.0%
CAATGGAGTCGTGAAAAGAA+AGG + Chr1:60244599-60244618 None:intergenic 40.0%
CACAGTGAGATATAAGCTCA+TGG - Chr1:60244455-60244474 MsG0180003303.01.T01:CDS 40.0%
CACCAGTTCCAAATTACATG+AGG + Chr1:60240275-60240294 None:intergenic 40.0%
CACGGTATCTTCCTTTAGAT+GGG + Chr1:60241006-60241025 None:intergenic 40.0%
CAGTGAACATCCACTATATC+CGG + Chr1:60243197-60243216 None:intergenic 40.0%
CTAACCAAACTAGCATCAGT+TGG + Chr1:60239330-60239349 None:intergenic 40.0%
CTTGACTACTAGCTCACAAA+AGG + Chr1:60244389-60244408 None:intergenic 40.0%
GATAGCTAAAGTCTACCGAA+GGG - Chr1:60240976-60240995 MsG0180003303.01.T01:intron 40.0%
GATGGCATGATGCAAATATG+TGG - Chr1:60241894-60241913 MsG0180003303.01.T01:intron 40.0%
GCTTGTGATTCTTCATCAAC+CGG + Chr1:60244714-60244733 None:intergenic 40.0%
GGTCCAATCCTTGGTTATAT+GGG - Chr1:60243676-60243695 MsG0180003303.01.T01:CDS 40.0%
GTAATCTGATCTGGTATGAC+AGG - Chr1:60240186-60240205 MsG0180003303.01.T01:intron 40.0%
GTGAGATATAAGCTCATGGA+GGG - Chr1:60244459-60244478 MsG0180003303.01.T01:CDS 40.0%
GTTAATCTGAGCAGCAAAGT+TGG + Chr1:60244829-60244848 None:intergenic 40.0%
GTTGAATTCGGGACATAAGT+TGG - Chr1:60239134-60239153 MsG0180003303.01.T01:intron 40.0%
GTTTCTCGCAATTCAAAGAC+AGG + Chr1:60240546-60240565 None:intergenic 40.0%
TAAACTGTAGCACATGAGAC+AGG + Chr1:60241468-60241487 None:intergenic 40.0%
TAACCAGCCCTTCTAATGAA+TGG + Chr1:60239955-60239974 None:intergenic 40.0%
TACTTCTCAAAACGAGAAGG+CGG + Chr1:60244343-60244362 None:intergenic 40.0%
TATATCTCACTGTGTGCAAG+AGG + Chr1:60244449-60244468 None:intergenic 40.0%
TATGAGGGAGAAAGCGAAAT+CGG - Chr1:60239089-60239108 MsG0180003303.01.T01:intron 40.0%
TCACGGTATCTTCCTTTAGA+TGG + Chr1:60241007-60241026 None:intergenic 40.0%
TGAAAAGAAAGGGTTGCATG+TGG + Chr1:60244241-60244260 None:intergenic 40.0%
TGAATTCGGGACATAAGTTG+GGG - Chr1:60239136-60239155 MsG0180003303.01.T01:intron 40.0%
TGACCTGATGCCGATAAATA+TGG + Chr1:60241377-60241396 None:intergenic 40.0%
TGAGATATAAGCTCATGGAG+GGG - Chr1:60244460-60244479 MsG0180003303.01.T01:CDS 40.0%
TGATTCAGATTATTGCCGAG+AGG + Chr1:60244638-60244657 None:intergenic 40.0%
TGCGAACCAATCCTTAATGT+CGG + Chr1:60240799-60240818 None:intergenic 40.0%
TGCTTGATGAGCTGAACATT+GGG - Chr1:60241110-60241129 MsG0180003303.01.T01:intron 40.0%
TGGCAATAAAGTTGCAGTAG+AGG + Chr1:60244174-60244193 None:intergenic 40.0%
TGTTGATGCATTGAATGACC+TGG - Chr1:60242952-60242971 MsG0180003303.01.T01:intron 40.0%
TGTTTGTCTCTCTCGCAAAA+TGG - Chr1:60238459-60238478 MsG0180003303.01.T01:CDS 40.0%
TTATATCTGCCCGGATATAG+TGG - Chr1:60243184-60243203 MsG0180003303.01.T01:intron 40.0%
TTCAAAGACAGGTGTATCCA+AGG + Chr1:60240535-60240554 None:intergenic 40.0%
TTCGGTAGACTTTAGCTATC+TGG + Chr1:60240976-60240995 None:intergenic 40.0%
TTGCTTGATGAGCTGAACAT+TGG - Chr1:60241109-60241128 MsG0180003303.01.T01:intron 40.0%
TTGTGTTAGCATAGCTCAGT+TGG + Chr1:60243392-60243411 None:intergenic 40.0%
TTGTTGCACCGTCTATTAGA+TGG + Chr1:60244088-60244107 None:intergenic 40.0%
TTTGAGTGTGAAAGCTCCTT+TGG + Chr1:60243455-60243474 None:intergenic 40.0%
TTTGCGGAAATTGGAGAGTT+GGG - Chr1:60239644-60239663 MsG0180003303.01.T01:intron 40.0%
! AACCCTTTCTTTTCATGCCA+TGG - Chr1:60244246-60244265 MsG0180003303.01.T01:CDS 40.0%
! ACCCTTTCTTTTCATGCCAT+GGG - Chr1:60244247-60244266 MsG0180003303.01.T01:CDS 40.0%
! ATGGCCTGACATCTTTGAAA+AGG - Chr1:60240948-60240967 MsG0180003303.01.T01:intron 40.0%
! ATTCGAAGCATTAGGAGTAC+CGG - Chr1:60244692-60244711 MsG0180003303.01.T01:CDS 40.0%
! ATTTTGCGAGAGAGACAAAC+AGG + Chr1:60238460-60238479 None:intergenic 40.0%
! CTAGACCCATTTTCTCAAGT+TGG - Chr1:60243243-60243262 MsG0180003303.01.T01:intron 40.0%
! CTTTCTTTTCACGACTCCAT+TGG - Chr1:60244597-60244616 MsG0180003303.01.T01:CDS 40.0%
! GATGATTTGAAATCGGGTCT+CGG - Chr1:60239282-60239301 MsG0180003303.01.T01:intron 40.0%
! GGTACCTTTTCAAAGATGTC+AGG + Chr1:60240955-60240974 None:intergenic 40.0%
! GGTAGCGATGATTTGAAATC+GGG - Chr1:60239276-60239295 MsG0180003303.01.T01:intron 40.0%
! GTCCCTGCTACAAAAAGTAT+TGG - Chr1:60241157-60241176 MsG0180003303.01.T01:intron 40.0%
! GTGATTTAAGGTCCAATCCT+TGG - Chr1:60243667-60243686 MsG0180003303.01.T01:CDS 40.0%
! GTTTGTTGAGAAGAACGATG+AGG + Chr1:60238672-60238691 None:intergenic 40.0%
! TCATCTAGGGTTAGGAATTC+GGG + Chr1:60238637-60238656 None:intergenic 40.0%
! TGATTGATGATCCAAAACCG+CGG + Chr1:60238851-60238870 None:intergenic 40.0%
! TGCCAAAAGACTTTTAGCCA+TGG - Chr1:60244780-60244799 MsG0180003303.01.T01:CDS 40.0%
! TTTTGCCCCACAAAGAATGA+AGG + Chr1:60243160-60243179 None:intergenic 40.0%
! TTTTGCGAGAGAGACAAACA+GGG + Chr1:60238459-60238478 None:intergenic 40.0%
!! AGTTGTGTTGATTGTGCACT+TGG + Chr1:60244554-60244573 None:intergenic 40.0%
!! ATATTCTGCTTTGAGGATGG+TGG + Chr1:60238607-60238626 None:intergenic 40.0%
!! ATCAATCAGCGGGTTTGTTA+GGG - Chr1:60238863-60238882 MsG0180003303.01.T01:intron 40.0%
!! CATAGTTCTAAGGAGGAAGT+TGG - Chr1:60238970-60238989 MsG0180003303.01.T01:intron 40.0%
!! CGTTTTTGGATGAATTGCAG+AGG + Chr1:60238699-60238718 None:intergenic 40.0%
!! GAAGAAGTTTTTGAGAGGCA+TGG - Chr1:60240501-60240520 MsG0180003303.01.T01:CDS 40.0%
!! GATTTGAGATTTTCCTGTGG+CGG + Chr1:60238548-60238567 None:intergenic 40.0%
!! GTGATATTCTGCTTTGAGGA+TGG + Chr1:60238610-60238629 None:intergenic 40.0%
!! GTGTGATGTGTTGTTTCCTT+TGG - Chr1:60239188-60239207 MsG0180003303.01.T01:intron 40.0%
!! GTTTTGGATCATCAATCAGC+GGG - Chr1:60238853-60238872 MsG0180003303.01.T01:intron 40.0%
!! TGATGGACATAGTTCTAAGG+AGG - Chr1:60238963-60238982 MsG0180003303.01.T01:intron 40.0%
!! TGGTGATGGACATAGTTCTA+AGG - Chr1:60238960-60238979 MsG0180003303.01.T01:intron 40.0%
!! TGTGTTGTTTCCTTTGGCAA+TGG - Chr1:60239194-60239213 MsG0180003303.01.T01:intron 40.0%
!! TTGGTGCCTTAGCATTCTTT+TGG - Chr1:60242204-60242223 MsG0180003303.01.T01:intron 40.0%
!! TTTGTTAGGGTTTGCTGATG+TGG - Chr1:60238876-60238895 MsG0180003303.01.T01:intron 40.0%
!!! GGTTTTGGATCATCAATCAG+CGG - Chr1:60238852-60238871 MsG0180003303.01.T01:intron 40.0%
!!! GTTTTCATGTGAGGCATTGA+AGG - Chr1:60238906-60238925 MsG0180003303.01.T01:intron 40.0%
!!! TCTTTTTTTTGGTGATGGCC+GGG + Chr1:60243911-60243930 None:intergenic 40.0%
AAAGAAAGGGTTGCATGTGC+CGG + Chr1:60244585-60244604 None:intergenic 45.0%
AAAGTTGCAGTAGAGGCTGT+AGG + Chr1:60244167-60244186 None:intergenic 45.0%
AAGATTGCCCAAGATCCCTA+AGG - Chr1:60239761-60239780 MsG0180003303.01.T01:intron 45.0%
AAGTTGCAGTAGAGGCTGTA+GGG + Chr1:60244166-60244185 None:intergenic 45.0%
ACCAATCCTTAATGTCGGTC+TGG + Chr1:60240794-60240813 None:intergenic 45.0%
ACCAGACCGACATTAAGGAT+TGG - Chr1:60240790-60240809 MsG0180003303.01.T01:intron 45.0%
ACCCCATGGCATGAAAAGAA+AGG + Chr1:60244252-60244271 None:intergenic 45.0%
AGATTCATCTATGTGGGCGA+TGG + Chr1:60244194-60244213 None:intergenic 45.0%
AGGAAAAGGAAAAGGACTGC+TGG + Chr1:60244369-60244388 None:intergenic 45.0%
AGGGTTCAGTTCAGAAATGC+AGG + Chr1:60238433-60238452 None:intergenic 45.0%
ATCAGATTACAACTCCGCCA+AGG + Chr1:60240176-60240195 None:intergenic 45.0%
ATGAAACATGTGGACTCCTG+TGG - Chr1:60244312-60244331 MsG0180003303.01.T01:CDS 45.0%
ATGCTGTAGGTGGAAGAGAA+AGG - Chr1:60242812-60242831 MsG0180003303.01.T01:CDS 45.0%
ATTATTATATGCAGGGGCCG+GGG + Chr1:60243358-60243377 None:intergenic 45.0%
CATTATTATATGCAGGGGCC+GGG + Chr1:60243359-60243378 None:intergenic 45.0%
CCCCATGGCATGAAAAGAAA+GGG + Chr1:60244251-60244270 None:intergenic 45.0%
CTCTTCGTCGAATCGAAAAC+TGG + Chr1:60238761-60238780 None:intergenic 45.0%
GAGAGAGACAAACAGGGTTT+AGG + Chr1:60238453-60238472 None:intergenic 45.0%
GAGAGGAACTAGTTCGATCT+TGG - Chr1:60239572-60239591 MsG0180003303.01.T01:intron 45.0%
GAGCGGTCAAGATAAATAGG+AGG - Chr1:60243635-60243654 MsG0180003303.01.T01:CDS 45.0%
GCATTATTATATGCAGGGGC+CGG + Chr1:60243360-60243379 None:intergenic 45.0%
GCTTGATGAGCTGAACATTG+GGG - Chr1:60241111-60241130 MsG0180003303.01.T01:intron 45.0%
GGATGCAAACACCTTGTAAC+CGG - Chr1:60242252-60242271 MsG0180003303.01.T01:CDS 45.0%
GGGTTCAGTTCAGAAATGCA+GGG + Chr1:60238432-60238451 None:intergenic 45.0%
GTGTCCAACTGATGCTAGTT+TGG - Chr1:60239323-60239342 MsG0180003303.01.T01:intron 45.0%
GTTGAGAAGAACGATGAGGA+AGG + Chr1:60238668-60238687 None:intergenic 45.0%
TCCAACATTCTTAGTCTGCG+CGG + Chr1:60243820-60243839 None:intergenic 45.0%
TCTTGGCGTTGCTTAAGGAA+AGG - Chr1:60239589-60239608 MsG0180003303.01.T01:intron 45.0%
TGAAATGCCCAAAGTGTGCA+GGG - Chr1:60244515-60244534 MsG0180003303.01.T01:CDS 45.0%
TGCTGGTCCAGCTGAAAAAA+TGG - Chr1:60241051-60241070 MsG0180003303.01.T01:intron 45.0%
TGGGCTTGTGTGGAAAATTG+TGG - Chr1:60239425-60239444 MsG0180003303.01.T01:intron 45.0%
TGTGTGGAAAATTGTGGCGT+GGG - Chr1:60239431-60239450 MsG0180003303.01.T01:intron 45.0%
TGTTCTTGGATGCATGGACT+TGG - Chr1:60244905-60244924 MsG0180003303.01.T01:five_prime_UTR 45.0%
TTAGCATAGCTCAGTTGGCA+GGG + Chr1:60243387-60243406 None:intergenic 45.0%
TTCGATCTTGGCGTTGCTTA+AGG - Chr1:60239584-60239603 MsG0180003303.01.T01:intron 45.0%
TTGAAATGCCCAAAGTGTGC+AGG - Chr1:60244514-60244533 MsG0180003303.01.T01:CDS 45.0%
TTGTGTGGAAAATTGTGGCG+TGG - Chr1:60239430-60239449 MsG0180003303.01.T01:intron 45.0%
! ACTGACTTTCATGCTGTAGG+TGG - Chr1:60242802-60242821 MsG0180003303.01.T01:CDS 45.0%
! ACTGTTCTAAATGCACCCCA+TGG + Chr1:60244266-60244285 None:intergenic 45.0%
! AGGATGGTGGTGAGGTTAAT+CGG + Chr1:60238594-60238613 None:intergenic 45.0%
! AGGTGAATAAGTGGGGTATC+CGG - Chr1:60243324-60243343 MsG0180003303.01.T01:intron 45.0%
! CATCAATCAGCGGGTTTGTT+AGG - Chr1:60238862-60238881 MsG0180003303.01.T01:intron 45.0%
! CATCTAGGGTTAGGAATTCG+GGG + Chr1:60238636-60238655 None:intergenic 45.0%
! CCCTTTCTTTTCATGCCATG+GGG - Chr1:60244248-60244267 MsG0180003303.01.T01:CDS 45.0%
! CGCGAATTTCATCTAGGGTT+AGG + Chr1:60238645-60238664 None:intergenic 45.0%
! GAAGGCGCGAATTTCATCTA+GGG + Chr1:60238650-60238669 None:intergenic 45.0%
! GCTGAACATTGGGGATTTTG+AGG - Chr1:60241120-60241139 MsG0180003303.01.T01:intron 45.0%
! GGCATTGAAGGCTAATGTGA+CGG - Chr1:60238918-60238937 MsG0180003303.01.T01:intron 45.0%
! GGGACATAAGTTGGGGAAAT+TGG - Chr1:60239143-60239162 MsG0180003303.01.T01:intron 45.0%
! GTTGATGAACAACGAGTGTG+CGG - Chr1:60238810-60238829 MsG0180003303.01.T01:intron 45.0%
! TCTCGGTGAAATCTTTGGGA+AGG - Chr1:60239299-60239318 MsG0180003303.01.T01:intron 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - Chr1:60243848-60243867 MsG0180003303.01.T01:CDS 45.0%
!! ATGCGGGTTGAGTTGAATTC+GGG - Chr1:60239123-60239142 MsG0180003303.01.T01:intron 45.0%
!! ATGTGTTGTTTGGGCTTGTG+TGG - Chr1:60239415-60239434 MsG0180003303.01.T01:intron 45.0%
!! CTTTAGATGGGTTGTCCCTT+CGG + Chr1:60240994-60241013 None:intergenic 45.0%
!! GATGCGGGTTGAGTTGAATT+CGG - Chr1:60239122-60239141 MsG0180003303.01.T01:intron 45.0%
!! TGCCTGCTGATTGAGTTTTG+CGG - Chr1:60241634-60241653 MsG0180003303.01.T01:intron 45.0%
!! TGGAAAGGAAAGTGTTCCTG+AGG - Chr1:60239038-60239057 MsG0180003303.01.T01:intron 45.0%
!! TTGGTGTTGCTGGTGATATG+AGG - Chr1:60238989-60239008 MsG0180003303.01.T01:intron 45.0%
!! TTTGACTTGAGTCTTGCCAG+AGG - Chr1:60243025-60243044 MsG0180003303.01.T01:intron 45.0%
!!! AAGAAAGCTGTTTTGGGGAG+AGG - Chr1:60239555-60239574 MsG0180003303.01.T01:intron 45.0%
!!! TCTGGAGCCATTTTTTCAGC+TGG + Chr1:60241061-60241080 None:intergenic 45.0%
!!! TGTTTTTAAAGGGGGTGCTC+AGG - Chr1:60243081-60243100 MsG0180003303.01.T01:intron 45.0%
!! ATAATAAAATTAATTACAAA+GGG + Chr1:60242033-60242052 None:intergenic 5.0%
AAACTCATCAACCAGCCAGC+AGG + Chr1:60241408-60241427 None:intergenic 50.0%
AAGAGGAAGAGAGGCTGAAG+AGG + Chr1:60244432-60244451 None:intergenic 50.0%
AAGCGAAATCGGTGCATTCG+AGG - Chr1:60239100-60239119 MsG0180003303.01.T01:intron 50.0%
AATCGGTGCATTCGAGGATG+CGG - Chr1:60239106-60239125 MsG0180003303.01.T01:intron 50.0%
ACTGTGTGCAAGAGGAAGAG+AGG + Chr1:60244441-60244460 None:intergenic 50.0%
ACTTCTCTCCCTGCACACTT+TGG + Chr1:60244526-60244545 None:intergenic 50.0%
AGAGGAAGAGAGGCTGAAGA+GGG + Chr1:60244431-60244450 None:intergenic 50.0%
ATCCATGGCGAAAAGCCTCT+CGG - Chr1:60244620-60244639 MsG0180003303.01.T01:CDS 50.0%
CAACCAATTGCATCCCAACC+AGG + Chr1:60240383-60240402 None:intergenic 50.0%
CAGGTCATCAGAATACCTGC+TGG - Chr1:60241390-60241409 MsG0180003303.01.T01:CDS 50.0%
CGAAGGGACAACCCATCTAA+AGG - Chr1:60240992-60241011 MsG0180003303.01.T01:intron 50.0%
CGGGTCTCGGTGAAATCTTT+GGG - Chr1:60239295-60239314 MsG0180003303.01.T01:intron 50.0%
CTGGTTGGGATGCAATTGGT+TGG - Chr1:60240381-60240400 MsG0180003303.01.T01:CDS 50.0%
CTTCTCTCCCTGCACACTTT+GGG + Chr1:60244525-60244544 None:intergenic 50.0%
GACTGCTTATGCTGTACTCG+AGG - Chr1:60239461-60239480 MsG0180003303.01.T01:intron 50.0%
GCTGAGACAGCTGACAGAAT+TGG - Chr1:60242842-60242861 MsG0180003303.01.T01:CDS 50.0%
GGCGGAGTTGTAATCTGATC+TGG - Chr1:60240177-60240196 MsG0180003303.01.T01:intron 50.0%
GGGAGCGGTAGTATAACAAC+TGG + Chr1:60244808-60244827 None:intergenic 50.0%
GTGGAGAGCTCTGTTCTTTG+AGG - Chr1:60240885-60240904 MsG0180003303.01.T01:intron 50.0%
GTTAGCATAGCTCAGTTGGC+AGG + Chr1:60243388-60243407 None:intergenic 50.0%
GTTCCTGGTTGGGATGCAAT+TGG - Chr1:60240377-60240396 MsG0180003303.01.T01:CDS 50.0%
TCACGACTCCATTGGATCCA+TGG - Chr1:60244605-60244624 MsG0180003303.01.T01:CDS 50.0%
TCATCAGAATACCTGCTGGC+TGG - Chr1:60241394-60241413 MsG0180003303.01.T01:CDS 50.0%
TCCGCGCAGACTAAGAATGT+TGG - Chr1:60243816-60243835 MsG0180003303.01.T01:CDS 50.0%
TCGGGTCTCGGTGAAATCTT+TGG - Chr1:60239294-60239313 MsG0180003303.01.T01:intron 50.0%
TGAAAGGTCACATCACCAGC+AGG + Chr1:60241531-60241550 None:intergenic 50.0%
TGAGGTTAATCGGTCGAGTG+CGG + Chr1:60238584-60238603 None:intergenic 50.0%
TTCCTTTGGCAATGGCGTTG+AGG - Chr1:60239202-60239221 MsG0180003303.01.T01:intron 50.0%
! GCAATGGCGTTGAGGGAATT+GGG - Chr1:60239210-60239229 MsG0180003303.01.T01:intron 50.0%
! GCTTTTCGCCATGGATCCAA+TGG + Chr1:60244616-60244635 None:intergenic 50.0%
! GGAAGGCGCGAATTTCATCT+AGG + Chr1:60238651-60238670 None:intergenic 50.0%
! GGTGAATAAGTGGGGTATCC+GGG - Chr1:60243325-60243344 MsG0180003303.01.T01:intron 50.0%
! GGTGAGGCATTCTTTGCTCA+GGG + Chr1:60244937-60244956 None:intergenic 50.0%
! GTGAATAAGTGGGGTATCCG+GGG - Chr1:60243326-60243345 MsG0180003303.01.T01:intron 50.0%
! TCCTTTGGCAATGGCGTTGA+GGG - Chr1:60239203-60239222 MsG0180003303.01.T01:intron 50.0%
! TTGAGATTTTCCTGTGGCGG+TGG + Chr1:60238545-60238564 None:intergenic 50.0%
!! AAGGAGGAAGTTGGTGTTGC+TGG - Chr1:60238979-60238998 MsG0180003303.01.T01:intron 50.0%
!! GCCTGCTGATTGAGTTTTGC+GGG - Chr1:60241635-60241654 MsG0180003303.01.T01:intron 50.0%
!! GTTAGGGTTTGCTGATGTGG+CGG - Chr1:60238879-60238898 MsG0180003303.01.T01:intron 50.0%
AAGGTTCGGGGTTCGAATCC+CGG - Chr1:60243890-60243909 MsG0180003303.01.T01:CDS 55.0%
ATCGGTGCATTCGAGGATGC+GGG - Chr1:60239107-60239126 MsG0180003303.01.T01:intron 55.0%
CCAACTGAGCTAAGCTCACG+AGG + Chr1:60243846-60243865 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - Chr1:60243843-60243862 MsG0180003303.01.T01:CDS 55.0%
CTGAGCAGCAAAGTTGGGAG+CGG + Chr1:60244823-60244842 None:intergenic 55.0%
GAACTCTCCGCCGTAACACT+CGG - Chr1:60238481-60238500 MsG0180003303.01.T01:CDS 55.0%
GACAGGTGTATCCAAGGCTG+TGG + Chr1:60240529-60240548 None:intergenic 55.0%
GCCCGCAAAACTCAATCAGC+AGG + Chr1:60241639-60241658 None:intergenic 55.0%
TCCCTCAACGCCATTGCCAA+AGG + Chr1:60239207-60239226 None:intergenic 55.0%
! CGGTGAGGCATTCTTTGCTC+AGG + Chr1:60244938-60244957 None:intergenic 55.0%
! GGCAATGGCGTTGAGGGAAT+TGG - Chr1:60239209-60239228 MsG0180003303.01.T01:intron 55.0%
!! CTGCTTTGAGGATGGTGGTG+AGG + Chr1:60238602-60238621 None:intergenic 55.0%
AACGAGTGTGCGGCGTTGCT+TGG - Chr1:60238820-60238839 MsG0180003303.01.T01:intron 60.0%
ACCCTTGCCGCCGAGTGTTA+CGG + Chr1:60238494-60238513 None:intergenic 60.0%
ACGAGTGTGCGGCGTTGCTT+GGG - Chr1:60238821-60238840 MsG0180003303.01.T01:intron 60.0%
AGGCGAGTAACGAGCACTCG+TGG + Chr1:60244736-60244755 None:intergenic 60.0%
CGAGAAGGCGGAACAACCAC+AGG + Chr1:60244331-60244350 None:intergenic 60.0%
GGTTAATCGGTCGAGTGCGG+AGG + Chr1:60238581-60238600 None:intergenic 60.0%
! GCTTGGGGTTTCCGCGGTTT+TGG - Chr1:60238837-60238856 MsG0180003303.01.T01:intron 60.0%
! TGCCGAGAGGCTTTTCGCCA+TGG + Chr1:60244625-60244644 None:intergenic 60.0%
!! AGGGTTTGCTGATGTGGCGG+CGG - Chr1:60238882-60238901 MsG0180003303.01.T01:intron 60.0%
ATGCCTCACCGCCACCGCTT+AGG - Chr1:60244947-60244966 MsG0180003303.01.T01:five_prime_UTR 65.0%
CGAGTGTGCGGCGTTGCTTG+GGG - Chr1:60238822-60238841 MsG0180003303.01.T01:intron 65.0%
CTCTCCGCCGTAACACTCGG+CGG - Chr1:60238484-60238503 MsG0180003303.01.T01:CDS 65.0%
CTTGCCGCCGAGTGTTACGG+CGG + Chr1:60238491-60238510 None:intergenic 65.0%
GCCGTAACACTCGGCGGCAA+GGG - Chr1:60238490-60238509 MsG0180003303.01.T01:CDS 65.0%
GGCGTTGCTTGGGGTTTCCG+CGG - Chr1:60238831-60238850 MsG0180003303.01.T01:intron 65.0%
GGTATCCGGGGTTCGAACCC+CGG - Chr1:60243338-60243357 MsG0180003303.01.T01:intron 65.0%
TCCTGTGGCGGTGGCGTAGA+CGG + Chr1:60238536-60238555 None:intergenic 65.0%
TGCCTCACCGCCACCGCTTA+GGG - Chr1:60244948-60244967 MsG0180003303.01.T01:five_prime_UTR 65.0%
! GGCGGCGGCGTTTTCATGTG+AGG - Chr1:60238897-60238916 MsG0180003303.01.T01:intron 65.0%
!! GAGGCATGGTGCCACAGCCT+TGG - Chr1:60240515-60240534 MsG0180003303.01.T01:CDS 65.0%
CGCCGTAACACTCGGCGGCA+AGG - Chr1:60238489-60238508 MsG0180003303.01.T01:CDS 70.0%
TGTGGCGGTGGCGTAGACGG+CGG + Chr1:60238533-60238552 None:intergenic 70.0%
AGGGGCCGGGGTTCGAACCC+CGG + Chr1:60243346-60243365 None:intergenic 75.0%
GCCGTCTACGCCACCGCCAC+AGG - Chr1:60238532-60238551 MsG0180003303.01.T01:CDS 75.0%
! GGCGGTGGCGTAGACGGCGG+AGG + Chr1:60238530-60238549 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 60238399 60244968 60238399 ID=MsG0180003303.01;Name=MsG0180003303.01
Chr1 mRNA 60238399 60244968 60238399 ID=MsG0180003303.01.T01;Parent=MsG0180003303.01;Name=MsG0180003303.01.T01;_AED=0.45;_eAED=0.48;_QI=79|0.66|0.71|1|1|1|7|0|820
Chr1 exon 60238399 60238661 60238399 ID=MsG0180003303.01.T01:exon:4040;Parent=MsG0180003303.01.T01
Chr1 exon 60239503 60239542 60239503 ID=MsG0180003303.01.T01:exon:4039;Parent=MsG0180003303.01.T01
Chr1 exon 60240265 60240546 60240265 ID=MsG0180003303.01.T01:exon:4038;Parent=MsG0180003303.01.T01
Chr1 exon 60241366 60241500 60241366 ID=MsG0180003303.01.T01:exon:4037;Parent=MsG0180003303.01.T01
Chr1 exon 60242226 60242483 60242226 ID=MsG0180003303.01.T01:exon:4036;Parent=MsG0180003303.01.T01
Chr1 exon 60242747 60242926 60242747 ID=MsG0180003303.01.T01:exon:4035;Parent=MsG0180003303.01.T01
Chr1 exon 60243585 60244968 60243585 ID=MsG0180003303.01.T01:exon:4034;Parent=MsG0180003303.01.T01
Chr1 five_prime_UTR 60244890 60244968 60244890 ID=MsG0180003303.01.T01:five_prime_utr;Parent=MsG0180003303.01.T01
Chr1 CDS 60243585 60244889 60243585 ID=MsG0180003303.01.T01:cds;Parent=MsG0180003303.01.T01
Chr1 CDS 60242747 60242926 60242747 ID=MsG0180003303.01.T01:cds;Parent=MsG0180003303.01.T01
Chr1 CDS 60242226 60242483 60242226 ID=MsG0180003303.01.T01:cds;Parent=MsG0180003303.01.T01
Chr1 CDS 60241366 60241500 60241366 ID=MsG0180003303.01.T01:cds;Parent=MsG0180003303.01.T01
Chr1 CDS 60240265 60240546 60240265 ID=MsG0180003303.01.T01:cds;Parent=MsG0180003303.01.T01
Chr1 CDS 60239503 60239542 60239503 ID=MsG0180003303.01.T01:cds;Parent=MsG0180003303.01.T01
Chr1 CDS 60238399 60238661 60238399 ID=MsG0180003303.01.T01:cds;Parent=MsG0180003303.01.T01
Gene Sequence

>MsG0180003303.01.T01

ATGGAACTCTCCGCCGTAACACTCGGCGGCAAGGGTTCATCACTCTCTTCCTCCGCCGTCTACGCCACCGCCACAGGAAAATCTCAAATCAAAATCGATTCCTCCGCACTCGACCGATTAACCTCACCACCATCCTCAAAGCAGAATATCACTATCCCCGAATTCCTAACCCTAGATGAAATTCGCGCCTTCCTCATCGTTCTTCTCAACAAACTCATCCTCTGCAATTCATCCAAAAACGTTGCATTAGCGATTTCAGAAGCTCTCAATTCGAATCAAACCAGTTTTCGATTCGACGAAGAGTTTGATGTAACTGAAGATGAACACTCGTTGTTGATGAACAACGAGTGTGCGGCGTTGCTTGGGGTTTCCGCGGTTTTGGATCATCAATCAGCGGGTTTGTTAGGGTTTGCTGATGTGGCGGCGGCGTTTTCATGTGAGGCATTGAAGGCTAATGTGACGGTTTTCAATTTGATGGATTCTGGTGATGGACATAGTTCTAAGGAGGAAGTTGGTGTTGCTGGTGATATGAGGATTTTGCTTAATGGATCTAAGTTTGTTGGAAAGGAAAGTGTTCCTGAGGTTGTGAAAATTGTTAAAGTTCATGGGGTTATGAGGGAGAAAGCGAAATCGGTGCATTCGAGGATGCGGGTTGAGTTGAATTCGGGACATAAGTTGGGGAAATTGGATCTTGGGAGTGAGCATACTGTGTGTGATGTGTTGTTTCCTTTGGCAATGGCGTTGAGGGAATTGGGTGAGTGTAGTTTTGCTCGTGCCAAAAGTAATTTGTTGTCAATTGGTAGCGATGATTTGAAATCGGGTCTCGGTGAAATCTTTGGGAAGGAGTGTCCAACTGATGCTAGTTTGGTTAGTAGTTTTAATGAATCTTTTAAGTTGTATTCTGGTAGGGTTTATGATAATTTTGCACATGAAATCAATGTGTTGTTTGGGCTTGTGTGGAAAATTGTGGCGTGGGAACTTGTGACTGCTTATGCTGTACTCGAGGCTGCTGATTTGAATGAAAAGATTGGAAATGTTCGGGAAAATGGAGAGAATAACAAAGTAGAAAAGAAGAAGAAGAAAGCTGTTTTGGGGAGAGGAACTAGTTCGATCTTGGCGTTGCTTAAGGAAAGGTTGTCGAGTGAAAAAAAGAGTGATGTAGAGAATTTGCGGAAATTGGAGAGTTGGGTTGCTGATTTTCTGTCGTTTTTGGATTTAGCTAAGCCTGAATTCAATGAATTTTTATTGAAAGTAAAGGATGTTGTTGAAAGCAATGAAAGCAGAAGATTGCCCAAGATCCCTAAGGGAACACGTGATTTCGCTAAAGAACAAATGACAATTAGAAAGAAAGCTTTTTCAGTGATAGAAGAAGTTTTTGAGAGGCATGGTGCCACAGCCTTGGATACACCTGTCTTTGAATTGCGAGAAACTCTTATGGGAAAATATGGAGAAGACTCAAAGTTGATTTATGATCTTGCTGATCAGGGTGGAGAGCTCTGTTCTTTGAGGTATGACTTGACAGTTCCATTTGCTAGATTTGTAGCTATGAATGGCCTGACATCTTTGAAAAGGTACCAGATAGCTAAAGTCTACCGAAGGGACAACCCATCTAAAGGAAGATACCGTGAATTTTATCAATGTGACTTTGATATTGCTGGTCCAGCTGAAAAAATGGCTCCAGATTTTGAGGTTGTTAGAATTTTGACTGAATTGCTTGATGAGCTGAACATTGGGGATTTTGAGGTAAAGTTGAATCATAGAAAGTTACTGGATGGCATGATGCAAATATGTGGAGTACCTCCTGAGAAGTTTAGAACTATATGTTCAAGTATCGACAAGTTAGACAAACAATCATTTGAACAGATAAGAAAAGAAATGGTGGAAGAGAAAGGATTAACTGCTGAGACAGCTGACAGAATTGGAACTTTTGTTAAAGAGAAAGGACATCCTTTAACATTGTTATCGAAACTTAAACAAGAAGACAGTGCTTTCTTAGAAAATGCTGGATCTGTTGATGCATTGAATGACCTGGAAATTTTATTCAGAGCTCTGGATAAATCAAAACGCCTTGATAAGGTTGTATTTGACTTGAGTCTTGCCAGAGGTCTTGATTATTATACTGGAGTTATATTTGAAGCTGTTTTTAAAGGGGGTGCTCAGACTAAGAATGTTGGATGTCCTCGTGAGCTTAGCTCAGTTGGAGTACCGGTTGATGAAGAATCACAAGCCACGAGTGCTCGTTACTCGCCTCTATATCTCTCTGTTTCAGATTACTGCCAAAAGACTTTTAGCCATGGATCCAGTTGTTATACTACCGCTCCCAACTTTGCTGCTCAGATTAACAATATCCCTATGCTGATTGGGATGCAATTCAAGTTTATGAAGGAATCTGTTGATATTGTTCTTGGATGCATGGACTTGGATTTATCCCTGAGCAAAGAATGCCTCACCGCCACCGCTTAG

Protein sequence

>MsG0180003303.01.T01

MELSAVTLGGKGSSLSSSAVYATATGKSQIKIDSSALDRLTSPPSSKQNITIPEFLTLDEIRAFLIVLLNKLILCNSSKNVALAISEALNSNQTSFRFDEEFDVTEDEHSLLMNNECAALLGVSAVLDHQSAGLLGFADVAAAFSCEALKANVTVFNLMDSGDGHSSKEEVGVAGDMRILLNGSKFVGKESVPEVVKIVKVHGVMREKAKSVHSRMRVELNSGHKLGKLDLGSEHTVCDVLFPLAMALRELGECSFARAKSNLLSIGSDDLKSGLGEIFGKECPTDASLVSSFNESFKLYSGRVYDNFAHEINVLFGLVWKIVAWELVTAYAVLEAADLNEKIGNVRENGENNKVEKKKKKAVLGRGTSSILALLKERLSSEKKSDVENLRKLESWVADFLSFLDLAKPEFNEFLLKVKDVVESNESRRLPKIPKGTRDFAKEQMTIRKKAFSVIEEVFERHGATALDTPVFELRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVPFARFVAMNGLTSLKRYQIAKVYRRDNPSKGRYREFYQCDFDIAGPAEKMAPDFEVVRILTELLDELNIGDFEVKLNHRKLLDGMMQICGVPPEKFRTICSSIDKLDKQSFEQIRKEMVEEKGLTAETADRIGTFVKEKGHPLTLLSKLKQEDSAFLENAGSVDALNDLEILFRALDKSKRLDKVVFDLSLARGLDYYTGVIFEAVFKGGAQTKNVGCPRELSSVGVPVDEESQATSARYSPLYLSVSDYCQKTFSHGSSCYTTAPNFAAQINNIPMLIGMQFKFMKESVDIVLGCMDLDLSLSKECLTATA*