AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029148.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029148.01.T02 MTR_5g081910 98.842 259 3 0 3 261 78 336 0.0 523
MsG0580029148.01.T02 MTR_5g081910 98.394 249 4 0 13 261 14 262 0.0 499
MsG0580029148.01.T02 MTR_1g036280 58.687 259 88 4 3 242 95 353 4.51e-102 302
MsG0580029148.01.T02 MTR_1g036280 51.445 173 65 4 3 156 95 267 1.13e-54 177
MsG0580029148.01.T02 MTR_8g076760 28.514 249 137 7 4 242 86 303 1.69e-27 108
MsG0580029148.01.T02 MTR_1g105410 28.016 257 136 6 5 248 83 303 4.75e-24 99.0
MsG0580029148.01.T02 MTR_7g109135 32.843 204 110 6 33 234 19 197 1.48e-22 92.8
MsG0580029148.01.T02 MTR_7g109135 32.381 210 115 6 33 240 40 224 4.04e-22 92.0
MsG0580029148.01.T02 MTR_7g109135 32.381 210 115 6 33 240 118 302 1.83e-21 91.7
MsG0580029148.01.T02 MTR_1g087840 30.270 185 104 5 52 234 132 293 3.24e-20 88.2
MsG0580029148.01.T02 MTR_5g055410 26.923 208 130 3 54 259 133 320 1.81e-18 84.0
MsG0580029148.01.T02 MTR_3g098460 29.577 213 121 8 31 240 290 476 6.47e-18 83.2
MsG0580029148.01.T02 MTR_7g109135 32.857 140 89 3 103 240 159 295 1.16e-17 81.3
MsG0580029148.01.T02 MTR_3g104600 28.283 198 132 4 39 234 130 319 3.33e-17 80.1
MsG0580029148.01.T02 MTR_7g084400 29.545 220 121 8 24 240 293 481 9.99e-17 79.7
MsG0580029148.01.T02 MTR_8g096050 27.500 240 136 10 5 240 293 498 1.16e-16 79.7
MsG0580029148.01.T02 MTR_5g039730 28.352 261 132 6 3 248 81 301 3.97e-16 77.0
MsG0580029148.01.T02 MTR_8g066975 28.302 212 128 5 40 249 108 297 2.47e-13 68.9
MsG0580029148.01.T02 MTR_4g119770 27.861 201 119 7 43 234 17 200 2.54e-12 66.2
MsG0580029148.01.T02 MTR_3g107510 22.772 202 127 3 38 238 214 387 1.03e-11 64.7
MsG0580029148.01.T02 MTR_4g012850 27.551 196 114 7 46 238 116 286 3.10e-11 62.8
MsG0580029148.01.T02 MTR_5g009500 30.723 166 97 6 98 245 178 343 4.11e-11 62.8
MsG0580029148.01.T02 MTR_6g091800 23.645 203 140 4 39 240 114 302 5.08e-11 62.4
MsG0580029148.01.T02 MTR_1g012030 22.886 201 126 3 39 238 232 404 6.13e-11 62.4
MsG0580029148.01.T03 MTR_5g081900 52.448 143 38 3 25 167 1 113 5.04e-36 124
MsG0580029148.01.T01 MTR_5g081910 98.842 259 3 0 3 261 78 336 0.0 523
MsG0580029148.01.T01 MTR_5g081910 98.394 249 4 0 13 261 14 262 0.0 499
MsG0580029148.01.T01 MTR_1g036280 58.687 259 88 4 3 242 95 353 4.51e-102 302
MsG0580029148.01.T01 MTR_1g036280 51.445 173 65 4 3 156 95 267 1.13e-54 177
MsG0580029148.01.T01 MTR_8g076760 28.514 249 137 7 4 242 86 303 1.69e-27 108
MsG0580029148.01.T01 MTR_1g105410 28.016 257 136 6 5 248 83 303 4.75e-24 99.0
MsG0580029148.01.T01 MTR_7g109135 32.843 204 110 6 33 234 19 197 1.48e-22 92.8
MsG0580029148.01.T01 MTR_7g109135 32.381 210 115 6 33 240 40 224 4.04e-22 92.0
MsG0580029148.01.T01 MTR_7g109135 32.381 210 115 6 33 240 118 302 1.83e-21 91.7
MsG0580029148.01.T01 MTR_1g087840 30.270 185 104 5 52 234 132 293 3.24e-20 88.2
MsG0580029148.01.T01 MTR_5g055410 26.923 208 130 3 54 259 133 320 1.81e-18 84.0
MsG0580029148.01.T01 MTR_3g098460 29.577 213 121 8 31 240 290 476 6.47e-18 83.2
MsG0580029148.01.T01 MTR_7g109135 32.857 140 89 3 103 240 159 295 1.16e-17 81.3
MsG0580029148.01.T01 MTR_3g104600 28.283 198 132 4 39 234 130 319 3.33e-17 80.1
MsG0580029148.01.T01 MTR_7g084400 29.545 220 121 8 24 240 293 481 9.99e-17 79.7
MsG0580029148.01.T01 MTR_8g096050 27.500 240 136 10 5 240 293 498 1.16e-16 79.7
MsG0580029148.01.T01 MTR_5g039730 28.352 261 132 6 3 248 81 301 3.97e-16 77.0
MsG0580029148.01.T01 MTR_8g066975 28.302 212 128 5 40 249 108 297 2.47e-13 68.9
MsG0580029148.01.T01 MTR_4g119770 27.861 201 119 7 43 234 17 200 2.54e-12 66.2
MsG0580029148.01.T01 MTR_3g107510 22.772 202 127 3 38 238 214 387 1.03e-11 64.7
MsG0580029148.01.T01 MTR_4g012850 27.551 196 114 7 46 238 116 286 3.10e-11 62.8
MsG0580029148.01.T01 MTR_5g009500 30.723 166 97 6 98 245 178 343 4.11e-11 62.8
MsG0580029148.01.T01 MTR_6g091800 23.645 203 140 4 39 240 114 302 5.08e-11 62.4
MsG0580029148.01.T01 MTR_1g012030 22.886 201 126 3 39 238 232 404 6.13e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029148.01.T02 AT2G39970 70.000 250 71 2 3 249 78 326 1.45e-124 357
MsG0580029148.01.T02 AT5G66380 31.923 260 134 7 4 255 82 306 1.74e-30 115
MsG0580029148.01.T02 AT2G47490 28.632 234 138 6 27 258 104 310 2.49e-23 97.1
MsG0580029148.01.T02 AT5G27520 30.268 261 125 10 5 248 85 305 7.11e-23 95.9
MsG0580029148.01.T02 AT3G05290 27.758 281 138 9 3 258 81 321 2.81e-22 94.4
MsG0580029148.01.T02 AT1G25380 30.126 239 131 7 27 258 108 317 4.34e-21 91.7
MsG0580029148.01.T02 AT1G25380 30.126 239 131 7 27 258 108 317 4.34e-21 91.7
MsG0580029148.01.T02 AT1G14560 25.203 246 159 7 5 245 96 321 1.93e-14 72.4
MsG0580029148.01.T02 AT1G14560 25.311 241 155 7 10 245 3 223 2.91e-14 70.5
MsG0580029148.01.T02 AT4G26180 25.943 212 141 4 27 236 104 301 2.48e-13 69.3
MsG0580029148.01.T02 AT5G46800 28.704 216 125 6 40 249 108 300 2.76e-13 68.9
MsG0580029148.01.T02 AT5G46800 28.704 216 125 6 40 249 108 300 2.76e-13 68.9
MsG0580029148.01.T02 AT5G46800 28.704 216 125 6 40 249 108 300 2.76e-13 68.9
MsG0580029148.01.T02 AT5G48970 27.354 223 132 8 43 253 25 229 9.57e-13 67.4
MsG0580029148.01.T02 AT4G32400 24.257 202 124 3 38 238 206 379 3.43e-12 66.2
MsG0580029148.01.T02 AT4G32400 29.139 151 98 3 99 247 147 290 8.04e-11 62.0
MsG0580029148.01.T02 AT1G14560 24.779 226 145 7 5 225 96 301 4.21e-12 65.5
MsG0580029148.01.T02 AT4G26180 26.154 195 128 4 27 219 104 284 7.61e-12 64.7
MsG0580029148.01.T02 AT5G51050 27.917 240 132 11 5 240 289 491 2.01e-11 63.9
MsG0580029148.01.T02 AT5G61810 25.110 227 132 8 20 240 134 328 2.30e-11 63.5
MsG0580029148.01.T02 AT5G61810 25.110 227 132 8 20 240 277 471 2.63e-11 63.5
MsG0580029148.01.T02 AT4G01100 30.357 168 96 7 94 240 127 294 3.36e-11 62.8
MsG0580029148.01.T02 AT4G01100 30.357 168 96 7 94 240 191 358 4.30e-11 62.8
MsG0580029148.01.T02 AT4G01100 30.357 168 96 7 94 240 177 344 4.44e-11 62.8
MsG0580029148.01.T03 AT2G39960 41.333 150 53 4 19 168 2 116 4.02e-27 101
MsG0580029148.01.T03 AT4G04200 40.667 150 51 3 19 168 2 113 3.23e-26 99.0
MsG0580029148.01.T01 AT2G39970 70.000 250 71 2 3 249 78 326 1.45e-124 357
MsG0580029148.01.T01 AT5G66380 31.923 260 134 7 4 255 82 306 1.74e-30 115
MsG0580029148.01.T01 AT2G47490 28.632 234 138 6 27 258 104 310 2.49e-23 97.1
MsG0580029148.01.T01 AT5G27520 30.268 261 125 10 5 248 85 305 7.11e-23 95.9
MsG0580029148.01.T01 AT3G05290 27.758 281 138 9 3 258 81 321 2.81e-22 94.4
MsG0580029148.01.T01 AT1G25380 30.126 239 131 7 27 258 108 317 4.34e-21 91.7
MsG0580029148.01.T01 AT1G25380 30.126 239 131 7 27 258 108 317 4.34e-21 91.7
MsG0580029148.01.T01 AT1G14560 25.203 246 159 7 5 245 96 321 1.93e-14 72.4
MsG0580029148.01.T01 AT1G14560 25.311 241 155 7 10 245 3 223 2.91e-14 70.5
MsG0580029148.01.T01 AT4G26180 25.943 212 141 4 27 236 104 301 2.48e-13 69.3
MsG0580029148.01.T01 AT5G46800 28.704 216 125 6 40 249 108 300 2.76e-13 68.9
MsG0580029148.01.T01 AT5G46800 28.704 216 125 6 40 249 108 300 2.76e-13 68.9
MsG0580029148.01.T01 AT5G46800 28.704 216 125 6 40 249 108 300 2.76e-13 68.9
MsG0580029148.01.T01 AT5G48970 27.354 223 132 8 43 253 25 229 9.57e-13 67.4
MsG0580029148.01.T01 AT4G32400 24.257 202 124 3 38 238 206 379 3.43e-12 66.2
MsG0580029148.01.T01 AT4G32400 29.139 151 98 3 99 247 147 290 8.04e-11 62.0
MsG0580029148.01.T01 AT1G14560 24.779 226 145 7 5 225 96 301 4.21e-12 65.5
MsG0580029148.01.T01 AT4G26180 26.154 195 128 4 27 219 104 284 7.61e-12 64.7
MsG0580029148.01.T01 AT5G51050 27.917 240 132 11 5 240 289 491 2.01e-11 63.9
MsG0580029148.01.T01 AT5G61810 25.110 227 132 8 20 240 134 328 2.30e-11 63.5
MsG0580029148.01.T01 AT5G61810 25.110 227 132 8 20 240 277 471 2.63e-11 63.5
MsG0580029148.01.T01 AT4G01100 30.357 168 96 7 94 240 127 294 3.36e-11 62.8
MsG0580029148.01.T01 AT4G01100 30.357 168 96 7 94 240 191 358 4.30e-11 62.8
MsG0580029148.01.T01 AT4G01100 30.357 168 96 7 94 240 177 344 4.44e-11 62.8

Find 46 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGTTTCTTCTTCTCATC+TGG 0.179183 5:-92902630 MsG0580029148.01.T03:intron
AAGAACACTTTGTACAATTT+TGG 0.182689 5:+92904626 None:intergenic
AGTCAAAGGTTGTGTGAATT+TGG 0.233448 5:-92904518 MsG0580029148.01.T01:exon
ATCCGCTATGAAGGGTTTAA+TGG 0.255735 5:-92904669 MsG0580029148.01.T01:CDS
GATTTATGTGAAAAGGGATA+TGG 0.279944 5:-92901557 MsG0580029148.01.T03:intron
AGATTTGTTACTTGATGAAT+AGG 0.321077 5:-92904397 MsG0580029148.01.T01:three_prime_UTR
ATTCGCTTTCTTCTGTCCTT+TGG 0.333788 5:+92902568 None:intergenic
AGCATATTCAATTTAATCAT+AGG 0.348803 5:-92904440 MsG0580029148.01.T01:three_prime_UTR
AAAGGTAAGGAAAGGATATA+AGG 0.355380 5:+92902232 None:intergenic
ACACACAGTGAATAAATAAA+AGG 0.361489 5:+92902214 None:intergenic
ACCTTTGACTTTAAAGTGTT+GGG 0.364126 5:+92904531 None:intergenic
AGAAGAAAATCGCGATTCTC+CGG 0.379794 5:+92902266 None:intergenic
TCAGTTTCTTCTTCTCATCT+GGG 0.384336 5:-92902629 MsG0580029148.01.T03:intron
ATGTGAAATTGAGCAATATT+AGG 0.385867 5:-92902351 MsG0580029148.01.T03:CDS
AGCAATATTAGGTGTTGCTT+GGG 0.397824 5:-92902340 MsG0580029148.01.T03:CDS
AACCTTTGACTTTAAAGTGT+TGG 0.408530 5:+92904530 None:intergenic
TTTGGATTGTAGGTTATAAC+GGG 0.434899 5:-92902391 MsG0580029148.01.T03:intron
ATTTATGTGAAAAGGGATAT+GGG 0.438502 5:-92901556 MsG0580029148.01.T03:intron
GAGCAATATTAGGTGTTGCT+TGG 0.440974 5:-92902341 MsG0580029148.01.T03:CDS
TAGGAAATAGACTGTGTCAT+TGG 0.453469 5:-92904421 MsG0580029148.01.T01:three_prime_UTR
ATTTAAGACATGCTTCCAAA+TGG 0.468121 5:-92904336 MsG0580029148.01.T01:three_prime_UTR
ATTAAGATGATCCGCTATGA+AGG 0.474624 5:-92904678 MsG0580029148.01.T01:CDS
CGAGAATGTGCTTGATTGAA+TGG 0.489697 5:+92902534 None:intergenic
TCCCAACACTTTAAAGTCAA+AGG 0.492946 5:-92904532 MsG0580029148.01.T01:CDS
TTGAATATGCTAAATGAAGA+TGG 0.498603 5:+92904452 None:intergenic
ATGAATAGGAGATTAAAATA+CGG 0.509336 5:-92904383 MsG0580029148.01.T01:three_prime_UTR
TTGTAGGTTATAACGGGTCG+TGG 0.511975 5:-92902385 MsG0580029148.01.T03:intron
GAAGAAAATCGCGATTCTCC+GGG 0.518343 5:+92902267 None:intergenic
TCTCGATGAGTCTGCTTCTG+AGG 0.518489 5:-92902516 MsG0580029148.01.T03:intron
GGGAACATTCTTTGCAAGCA+AGG 0.534911 5:+92904551 None:intergenic
AATAAATAAAAGGTAAGGAA+AGG 0.544623 5:+92902224 None:intergenic
TTCTTCAAATTCAGGTACAC+AGG 0.560566 5:-92904709 MsG0580029148.01.T01:intron
CAGTGAATAAATAAAAGGTA+AGG 0.583044 5:+92902219 None:intergenic
TTAAGATGATCCGCTATGAA+GGG 0.584087 5:-92904677 MsG0580029148.01.T01:CDS
GCAGCTGATCATATACACTA+AGG 0.584453 5:-92901443 MsG0580029148.01.T03:CDS
GTTCGTGAGTAATGAATCTG+AGG 0.584535 5:+92904474 None:intergenic
AACGGGTCGTGGGTATGTTG+AGG 0.596614 5:-92902374 MsG0580029148.01.T03:CDS
TCACAGAAACTTACAGTCAG+AGG 0.616719 5:+92901394 None:intergenic
CAGAGGATAAGTAAACAGAA+TGG 0.624465 5:+92901411 None:intergenic
ATTCGAAACATGGCAACCAA+AGG 0.628041 5:-92902584 MsG0580029148.01.T03:CDS
TGTAGGTTATAACGGGTCGT+GGG 0.632463 5:-92902384 MsG0580029148.01.T03:intron
TACGTATGTAGTCTTCAACT+TGG 0.636467 5:-92901470 MsG0580029148.01.T03:CDS
CTACATACGTACGAGAGTCA+AGG 0.645912 5:+92901482 None:intergenic
TCAGCGAAGAATTCGAAACA+TGG 0.664282 5:-92902594 MsG0580029148.01.T03:CDS
ATCCATTAAACCCTTCATAG+CGG 0.697028 5:+92904667 None:intergenic
TTCGTGAGTAATGAATCTGA+GGG 0.703508 5:+92904475 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGTAAATATCTAAATTA+AGG - Chr5:92906879-92906898 MsG0580029148.01.T01:intron 10.0%
!! ATTTATTTATCAATTAGAAT+AGG - Chr5:92902363-92902382 MsG0580029148.01.T03:CDS 10.0%
!! TATGTAAAACTTATTTATAT+TGG - Chr5:92905313-92905332 MsG0580029148.01.T01:intron 10.0%
!!! ATCTATTAAACTTATTTTTT+TGG + Chr5:92905723-92905742 None:intergenic 10.0%
!!! TAATTTTTTTTTAGAGAAAA+CGG + Chr5:92904977-92904996 None:intergenic 10.0%
!!! TTATTCTTTGAATTTTTTAA+AGG - Chr5:92904698-92904717 MsG0580029148.01.T01:CDS 10.0%
!! ATTTATATATCAATCAGTTT+AGG - Chr5:92902570-92902589 MsG0580029148.01.T03:CDS 15.0%
!! TCATTATTCTTAAAAACATA+AGG - Chr5:92903298-92903317 MsG0580029148.01.T03:intron 15.0%
!! TTTATATCATATTCTAATAG+AGG + Chr5:92901690-92901709 None:intergenic 15.0%
!!! ATTATTTCTATCAAATATTC+AGG - Chr5:92901403-92901422 MsG0580029148.01.T03:CDS 15.0%
!!! ATTTTTTAAAACTTGGTATT+AGG + Chr5:92905635-92905654 None:intergenic 15.0%
!!! GTTTTACATATTGTTTTTTT+AGG + Chr5:92905303-92905322 None:intergenic 15.0%
!!! TTTTTAAAGCAAAGATTATA+CGG + Chr5:92902452-92902471 None:intergenic 15.0%
!!! TTTTTAGTAAATCATGTAAT+TGG + Chr5:92904909-92904928 None:intergenic 15.0%
!! AATAAAACTTTACCAAACTT+TGG + Chr5:92905130-92905149 None:intergenic 20.0%
!! AATAAATAAAAGGTAAGGAA+AGG + Chr5:92906414-92906433 None:intergenic 20.0%
!! AGCATATTCAATTTAATCAT+AGG - Chr5:92904195-92904214 MsG0580029148.01.T03:intron 20.0%
!! AGTCATAATATAACTCTATA+TGG + Chr5:92905553-92905572 None:intergenic 20.0%
!! ATGAATAGGAGATTAAAATA+CGG - Chr5:92904252-92904271 MsG0580029148.01.T01:intron 20.0%
!! CAAAAATAATAAAACGTGAT+TGG - Chr5:92905836-92905855 MsG0580029148.01.T01:CDS 20.0%
!! CAACAAGATCAAAAAAATTA+GGG + Chr5:92906158-92906177 None:intergenic 20.0%
!! CATGATTTACTAAAAAGAAA+AGG - Chr5:92904913-92904932 MsG0580029148.01.T01:intron 20.0%
!! TAAAAGAACTATTACTAGTA+TGG - Chr5:92901933-92901952 MsG0580029148.01.T03:intron 20.0%
!! TAAAATAGTACTAAATTCTG+AGG + Chr5:92905075-92905094 None:intergenic 20.0%
!! TCAACAAGATCAAAAAAATT+AGG + Chr5:92906159-92906178 None:intergenic 20.0%
!! TGTGTTGAAAATGAAATATT+TGG - Chr5:92906975-92906994 MsG0580029148.01.T01:intron 20.0%
!! TGTTGTGAAATAACAATTAT+AGG - Chr5:92906753-92906772 MsG0580029148.01.T01:intron 20.0%
!! TTATATTGGAGTAGTAATAT+TGG - Chr5:92905327-92905346 MsG0580029148.01.T01:intron 20.0%
!! TTATTAAGGAGAAAAAAACA+TGG + Chr5:92903632-92903651 None:intergenic 20.0%
!! TTCTTATTATACCATGAATA+TGG - Chr5:92903481-92903500 MsG0580029148.01.T03:intron 20.0%
!! TTTCTCCTTAATAATTTGAA+CGG - Chr5:92903638-92903657 MsG0580029148.01.T03:intron 20.0%
!!! AAGTTTGGTAAAGTTTTATT+TGG - Chr5:92905130-92905149 MsG0580029148.01.T01:intron 20.0%
!!! ATCTTTTCGAATTAATTTGT+TGG - Chr5:92905608-92905627 MsG0580029148.01.T01:intron 20.0%
!!! ATTTGATGATTTATGTGAAA+AGG - Chr5:92907071-92907090 MsG0580029148.01.T01:intron 20.0%
!!! CTTATCATATACTGAATTTT+CGG - Chr5:92902650-92902669 MsG0580029148.01.T03:intron 20.0%
!!! CTTTTATAATAAGATTACAG+AGG + Chr5:92901919-92901938 None:intergenic 20.0%
!!! TAGTTGTTTTAATTGAAAGT+TGG - Chr5:92907030-92907049 MsG0580029148.01.T01:CDS 20.0%
!!! TGAGTTTTTGTTTGTTAATT+GGG - Chr5:92906214-92906233 MsG0580029148.01.T01:intron 20.0%
!!! TGTGATTTTAGTTTTACATA+CGG + Chr5:92903023-92903042 None:intergenic 20.0%
!!! TTAGTACTATTTTAAATGCT+TGG - Chr5:92905081-92905100 MsG0580029148.01.T01:intron 20.0%
!!! TTGAGTTTTTGTTTGTTAAT+TGG - Chr5:92906213-92906232 MsG0580029148.01.T01:intron 20.0%
!!! TTTGATGATTTATGTGAAAA+GGG - Chr5:92907072-92907091 MsG0580029148.01.T01:intron 20.0%
!!! TTTTTTTCTTTACCAAAGTT+TGG - Chr5:92905115-92905134 MsG0580029148.01.T01:intron 20.0%
! AAACACTTGTGATACTATTT+GGG + Chr5:92902215-92902234 None:intergenic 25.0%
! AAGATTATGAACCATATTCA+TGG + Chr5:92903495-92903514 None:intergenic 25.0%
! AATTGCCACAATAATGAATT+AGG + Chr5:92905451-92905470 None:intergenic 25.0%
! ACACACAGTGAATAAATAAA+AGG + Chr5:92906424-92906443 None:intergenic 25.0%
! AGCTGAAAGAAAAATTTATC+AGG + Chr5:92901590-92901609 None:intergenic 25.0%
! ATCAAGACTATAGTGATATA+GGG - Chr5:92903849-92903868 MsG0580029148.01.T03:intron 25.0%
! ATGTGAAATTGAGCAATATT+AGG - Chr5:92906284-92906303 MsG0580029148.01.T01:intron 25.0%
! ATTGCCACAATAATGAATTA+GGG + Chr5:92905450-92905469 None:intergenic 25.0%
! ATTTATGTGAAAAGGGATAT+GGG - Chr5:92907079-92907098 MsG0580029148.01.T01:intron 25.0%
! CAGTGAATAAATAAAAGGTA+AGG + Chr5:92906419-92906438 None:intergenic 25.0%
! CCAGTACTAATTTAAGAAAA+TGG - Chr5:92906603-92906622 MsG0580029148.01.T01:intron 25.0%
! GAAAAGAAAGAATAGATGAT+TGG - Chr5:92902474-92902493 MsG0580029148.01.T03:intron 25.0%
! GATCAATACTAATATGTGAT+TGG + Chr5:92905811-92905830 None:intergenic 25.0%
! TAAACACTTGTGATACTATT+TGG + Chr5:92902216-92902235 None:intergenic 25.0%
! TAACACCGTTCAAATTATTA+AGG + Chr5:92903646-92903665 None:intergenic 25.0%
! TCAAATAAGTTAATCCAAAC+AGG - Chr5:92902251-92902270 MsG0580029148.01.T03:CDS 25.0%
! TCTAAAAAAAAATTACCTGC+GGG - Chr5:92904982-92905001 MsG0580029148.01.T01:intron 25.0%
! TCTTAAAAACATAAGGAAGA+AGG - Chr5:92903305-92903324 MsG0580029148.01.T03:intron 25.0%
! TGTAACTAGATATTTCTTCT+CGG - Chr5:92903119-92903138 MsG0580029148.01.T03:intron 25.0%
! TTAATAATTTGAACGGTGTT+AGG - Chr5:92903645-92903664 MsG0580029148.01.T03:intron 25.0%
! TTATATTATGACTTTACACG+AGG - Chr5:92905560-92905579 MsG0580029148.01.T01:intron 25.0%
! TTGAATATGCTAAATGAAGA+TGG + Chr5:92904186-92904205 None:intergenic 25.0%
!! AAGAACACTTTGTACAATTT+TGG + Chr5:92904012-92904031 None:intergenic 25.0%
!! ACAGATTCAGAACAATATTT+TGG + Chr5:92903361-92903380 None:intergenic 25.0%
!! ATGATAGCATATACAAGTTT+TGG + Chr5:92904883-92904902 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCTAAC+AGG + Chr5:92902003-92902022 None:intergenic 25.0%
!! CCATTTTCTTAAATTAGTAC+TGG + Chr5:92906606-92906625 None:intergenic 25.0%
!! CGATTTTGTGATAACTTTTA+TGG - Chr5:92905355-92905374 MsG0580029148.01.T01:intron 25.0%
!! CTCTAAAAAAAAATTACCTG+CGG - Chr5:92904981-92905000 MsG0580029148.01.T01:intron 25.0%
!! CTTTCAATGTAAATTTTACC+CGG + Chr5:92901523-92901542 None:intergenic 25.0%
!! TAAACACGAATTTTTCCATT+TGG + Chr5:92904317-92904336 None:intergenic 25.0%
!! TGATAGCATATACAAGTTTT+GGG + Chr5:92904882-92904901 None:intergenic 25.0%
!! TGTTAATTGGGATTGAATTT+TGG - Chr5:92906226-92906245 MsG0580029148.01.T01:intron 25.0%
!! TTAAGTTGTTTATCCTAACA+GGG + Chr5:92902002-92902021 None:intergenic 25.0%
!! TTTTGGATTGTAGGTTATAA+CGG - Chr5:92906243-92906262 MsG0580029148.01.T01:intron 25.0%
!! TTTTGTTAAGTTATGCTAGT+TGG - Chr5:92901971-92901990 MsG0580029148.01.T03:intron 25.0%
!!! AACGTATTGATTATTGACTA+TGG + Chr5:92903249-92903268 None:intergenic 25.0%
!!! AAGTTTGTTAAAATTCCACT+AGG + Chr5:92906797-92906816 None:intergenic 25.0%
!!! AATACTGTTTTTGTTATGGT+TGG - Chr5:92906842-92906861 MsG0580029148.01.T01:CDS 25.0%
!!! ACGTTTTATTATTTTTGCGT+TGG + Chr5:92905833-92905852 None:intergenic 25.0%
!!! AGATTTGTTACTTGATGAAT+AGG - Chr5:92904238-92904257 MsG0580029148.01.T01:three_prime_UTR 25.0%
!!! AGTTAACTTTTTTCATGCTA+AGG - Chr5:92902848-92902867 MsG0580029148.01.T03:intron 25.0%
!!! GTTAACTTTTTTCATGCTAA+GGG - Chr5:92902849-92902868 MsG0580029148.01.T03:intron 25.0%
!!! TGCTAATACTGTTTTTGTTA+TGG - Chr5:92906838-92906857 MsG0580029148.01.T01:CDS 25.0%
!!! TGTAATAGACTTTTTTTCGA+AGG - Chr5:92905669-92905688 MsG0580029148.01.T01:CDS 25.0%
!!! TTGTTTTAATTGAAAGTTGG+AGG - Chr5:92907033-92907052 MsG0580029148.01.T01:intron 25.0%
!!! TTTTTTGTGTTGTCAAATAG+CGG - Chr5:92906510-92906529 MsG0580029148.01.T01:intron 25.0%
AAAAAATTAGGGTTTAGCGA+AGG + Chr5:92906147-92906166 None:intergenic 30.0%
AAAGGTAAGGAAAGGATATA+AGG + Chr5:92906406-92906425 None:intergenic 30.0%
AACAAACACAACGCAAAAAA+TGG + Chr5:92903218-92903237 None:intergenic 30.0%
AATTACTTGAATTACTCGCA+TGG - Chr5:92901551-92901570 MsG0580029148.01.T03:intron 30.0%
ACAGTATGTTCTTCAAATTC+AGG - Chr5:92903918-92903937 MsG0580029148.01.T03:intron 30.0%
ACATAGCAACATAAGCATAT+TGG + Chr5:92903578-92903597 None:intergenic 30.0%
AGAAAGTGATGTTTGTTCAA+CGG + Chr5:92901833-92901852 None:intergenic 30.0%
ATGCCTTTAATCTTAAGTGT+TGG - Chr5:92903763-92903782 MsG0580029148.01.T03:intron 30.0%
ATGTGATTGGATAGATTATG+TGG + Chr5:92905798-92905817 None:intergenic 30.0%
CATAGCAACATAAGCATATT+GGG + Chr5:92903577-92903596 None:intergenic 30.0%
CTTTCCCTAATTCATTATTG+TGG - Chr5:92905443-92905462 MsG0580029148.01.T01:intron 30.0%
GAAAGAAAAATAACGAAGGA+TGG + Chr5:92905428-92905447 None:intergenic 30.0%
GACAAGAGACACAATTATAA+AGG - Chr5:92903439-92903458 MsG0580029148.01.T03:intron 30.0%
GAGTGTAGTCAAAGAATATA+AGG + Chr5:92903894-92903913 None:intergenic 30.0%
GATCAAGACTATAGTGATAT+AGG - Chr5:92903848-92903867 MsG0580029148.01.T03:intron 30.0%
GATTTATGTGAAAAGGGATA+TGG - Chr5:92907078-92907097 MsG0580029148.01.T01:intron 30.0%
TAATACGCACATAAAAACGA+AGG - Chr5:92905943-92905962 MsG0580029148.01.T01:intron 30.0%
TACTAGTATGGTATATTCAG+TGG - Chr5:92901945-92901964 MsG0580029148.01.T03:intron 30.0%
TAGGGAAAGAAAAATAACGA+AGG + Chr5:92905432-92905451 None:intergenic 30.0%
TATCAATCAGTTTAGGTGAT+TGG - Chr5:92902577-92902596 MsG0580029148.01.T03:CDS 30.0%
TTTGGATTGTAGGTTATAAC+GGG - Chr5:92906244-92906263 MsG0580029148.01.T01:intron 30.0%
! AATTGAAAGTTGGAGGTTTT+TGG - Chr5:92907040-92907059 MsG0580029148.01.T01:intron 30.0%
! ATTCCAAATTTTCTCTCACT+AGG + Chr5:92906479-92906498 None:intergenic 30.0%
! ATTTAAGACATGCTTCCAAA+TGG - Chr5:92904299-92904318 MsG0580029148.01.T01:intron 30.0%
! CTTCTATTTTCTGTGATTTG+TGG - Chr5:92906814-92906833 MsG0580029148.01.T01:CDS 30.0%
! GATAGCATATACAAGTTTTG+GGG + Chr5:92904881-92904900 None:intergenic 30.0%
!! AACCTTTGACTTTAAAGTGT+TGG + Chr5:92904108-92904127 None:intergenic 30.0%
!! AATGGATTTTACAAAGGCAT+GGG - Chr5:92903984-92904003 MsG0580029148.01.T03:intron 30.0%
!! ACCTTTGACTTTAAAGTGTT+GGG + Chr5:92904107-92904126 None:intergenic 30.0%
!! GTTGTTTTGTTACATATCTC+AGG - Chr5:92902886-92902905 MsG0580029148.01.T03:intron 30.0%
!! TGTTTTTGTTATGGTTGGAT+GGG - Chr5:92906847-92906866 MsG0580029148.01.T01:CDS 30.0%
!!! GAAAGCTGTAGTATTTTTTC+TGG - Chr5:92904421-92904440 MsG0580029148.01.T01:three_prime_UTR 30.0%
!!! GGGTTTAATGGATTTTACAA+AGG - Chr5:92903978-92903997 MsG0580029148.01.T03:intron 30.0%
!!! TAATGGATTTTACAAAGGCA+TGG - Chr5:92903983-92904002 MsG0580029148.01.T03:intron 30.0%
AACAATGTTTCAGTTCTCAC+TGG + Chr5:92904841-92904860 None:intergenic 35.0%
AATAGGTGTTTGCGTAGTTA+TGG - Chr5:92902380-92902399 MsG0580029148.01.T03:CDS 35.0%
AATTATCTCCATAAGCACTC+CGG + Chr5:92902148-92902167 None:intergenic 35.0%
ACACGTATTCATGCTATTGA+GGG + Chr5:92904582-92904601 None:intergenic 35.0%
AGAATTAGACTTCCATCCAA+TGG - Chr5:92905765-92905784 MsG0580029148.01.T01:intron 35.0%
AGTCAAAGGTTGTGTGAATT+TGG - Chr5:92904117-92904136 MsG0580029148.01.T03:intron 35.0%
ATAGGTGTTTGCGTAGTTAT+GGG - Chr5:92902381-92902400 MsG0580029148.01.T03:CDS 35.0%
ATCCATTAAACCCTTCATAG+CGG + Chr5:92903971-92903990 None:intergenic 35.0%
ATGCCTAGTGAGAGAAAATT+TGG - Chr5:92906473-92906492 MsG0580029148.01.T01:intron 35.0%
ATTAAGATGATCCGCTATGA+AGG - Chr5:92903957-92903976 MsG0580029148.01.T03:intron 35.0%
ATTATGTGGCGAAATACCAT+TGG + Chr5:92905784-92905803 None:intergenic 35.0%
CAAAAATCTCATTGGCAACT+AGG + Chr5:92902278-92902297 None:intergenic 35.0%
CAAGCTAGACAAGTTAACAA+TGG - Chr5:92903415-92903434 MsG0580029148.01.T03:intron 35.0%
CAGACCATACTATAGTCAAA+TGG - Chr5:92904482-92904501 MsG0580029148.01.T01:three_prime_UTR 35.0%
CAGAGGATAAGTAAACAGAA+TGG + Chr5:92907227-92907246 None:intergenic 35.0%
CAGCATAAGGAAATACTATG+TGG - Chr5:92903598-92903617 MsG0580029148.01.T03:intron 35.0%
CCACTAGCAAGATAGTAATT+CGG + Chr5:92904536-92904555 None:intergenic 35.0%
CCATACTATAGTCAAATGGT+AGG - Chr5:92904486-92904505 MsG0580029148.01.T01:three_prime_UTR 35.0%
CCTACCATTTGACTATAGTA+TGG + Chr5:92904489-92904508 None:intergenic 35.0%
CTATAGTATGGTCTGTTTGA+TGG + Chr5:92904477-92904496 None:intergenic 35.0%
GAGTGTGTGTTCAAATTGAA+AGG - Chr5:92906936-92906955 MsG0580029148.01.T01:intron 35.0%
GATTCAAGAAGTTTATGACG+AGG - Chr5:92902768-92902787 MsG0580029148.01.T03:intron 35.0%
GCACCAACACTTAAGATTAA+AGG + Chr5:92903769-92903788 None:intergenic 35.0%
GTAAATTAACTTTGCGCGAA+TGG + Chr5:92904953-92904972 None:intergenic 35.0%
GTTGTTTGCATAAGCTATTC+CGG - Chr5:92902126-92902145 MsG0580029148.01.T03:intron 35.0%
TAAAGCAGCAACAATAAGTG+AGG + Chr5:92901499-92901518 None:intergenic 35.0%
TAAGGAAATACTATGTGGCA+TGG - Chr5:92903603-92903622 MsG0580029148.01.T03:intron 35.0%
TACAGCATGAACTGTATAGA+AGG + Chr5:92902920-92902939 None:intergenic 35.0%
TACGTATGTAGTCTTCAACT+TGG - Chr5:92907165-92907184 MsG0580029148.01.T01:CDS 35.0%
TAGGAAATAGACTGTGTCAT+TGG - Chr5:92904214-92904233 MsG0580029148.01.T02:three_prime_UTR 35.0%
TATACCTTCACAACAAGAAG+AGG + Chr5:92903182-92903201 None:intergenic 35.0%
TATGTTGCTATGTCAGCATA+AGG - Chr5:92903585-92903604 MsG0580029148.01.T03:intron 35.0%
TCAGTTTCTTCTTCTCATCT+GGG - Chr5:92906006-92906025 MsG0580029148.01.T01:intron 35.0%
TGTATTACCAACATTGGTCA+TGG - Chr5:92902816-92902835 MsG0580029148.01.T03:intron 35.0%
TGTGTATGTGCTTGAATGAA+GGG - Chr5:92904599-92904618 MsG0580029148.01.T01:CDS 35.0%
TGTTGTCTTGAATAGTTGAC+AGG + Chr5:92902695-92902714 None:intergenic 35.0%
TTAAGATGATCCGCTATGAA+GGG - Chr5:92903958-92903977 MsG0580029148.01.T03:intron 35.0%
TTCAGTTTCTTCTTCTCATC+TGG - Chr5:92906005-92906024 MsG0580029148.01.T01:intron 35.0%
TTCGTGAGTAATGAATCTGA+GGG + Chr5:92904163-92904182 None:intergenic 35.0%
TTCTTCAAATTCAGGTACAC+AGG - Chr5:92903926-92903945 MsG0580029148.01.T03:intron 35.0%
TTTACACGAGGTCATAAAAG+TGG - Chr5:92905572-92905591 MsG0580029148.01.T01:intron 35.0%
! AAGACTATTGACTAAAGCTC+AGG + Chr5:92902305-92902324 None:intergenic 35.0%
! ATGTCATGAGTTGTTTCCAT+AGG - Chr5:92902185-92902204 MsG0580029148.01.T03:intron 35.0%
! CTAGTTGCCAATGAGATTTT+TGG - Chr5:92902276-92902295 MsG0580029148.01.T03:CDS 35.0%
! GAGAACTCTTGTTTGTATGT+AGG - Chr5:92906914-92906933 MsG0580029148.01.T01:intron 35.0%
! GGGATTGAATTTTGGATTGT+AGG - Chr5:92906234-92906253 MsG0580029148.01.T01:intron 35.0%
! GTTTTACAAGAAGAAGTTCC+CGG - Chr5:92906350-92906369 MsG0580029148.01.T01:intron 35.0%
! TGCACGTCATTGTAAGATTT+TGG + Chr5:92905863-92905882 None:intergenic 35.0%
! TTATCCTCTTCTTGTTGTGA+AGG - Chr5:92903175-92903194 MsG0580029148.01.T03:intron 35.0%
! TTTTGACATCCCAACTATGT+TGG + Chr5:92902410-92902429 None:intergenic 35.0%
!! ACGGTTTTGATCAGATTTGT+CGG - Chr5:92906673-92906692 MsG0580029148.01.T01:intron 35.0%
!! AGCAATATTAGGTGTTGCTT+GGG - Chr5:92906295-92906314 MsG0580029148.01.T01:intron 35.0%
!! CTTATTGTTGCTGCTTTATC+CGG - Chr5:92901501-92901520 MsG0580029148.01.T03:CDS 35.0%
!! GTTTTTGTTATGGTTGGATG+GGG - Chr5:92906848-92906867 MsG0580029148.01.T01:CDS 35.0%
!! TCCCAACACTTTAAAGTCAA+AGG - Chr5:92904103-92904122 MsG0580029148.01.T03:intron 35.0%
!! TTATTGTTGCTGCTTTATCC+GGG - Chr5:92901502-92901521 MsG0580029148.01.T03:CDS 35.0%
!!! CTGTTTTTGTTATGGTTGGA+TGG - Chr5:92906846-92906865 MsG0580029148.01.T01:CDS 35.0%
!!! TTTTTTCAACTTCGCCAACA+AGG + Chr5:92902948-92902967 None:intergenic 35.0%
ACAAACCACTTACACAGACA+CGG - Chr5:92906552-92906571 MsG0580029148.01.T01:intron 40.0%
ACAATTCCTTCTGTTGTGTC+CGG + Chr5:92903695-92903714 None:intergenic 40.0%
ACATCGCACTCTACTTCAAA+AGG + Chr5:92907008-92907027 None:intergenic 40.0%
ACTATAGTCAAATGGTAGGC+TGG - Chr5:92904490-92904509 MsG0580029148.01.T01:three_prime_UTR 40.0%
ACTATATCACTGTAGCCTAG+TGG - Chr5:92906779-92906798 MsG0580029148.01.T01:CDS 40.0%
AGAAGAAAATCGCGATTCTC+CGG + Chr5:92906372-92906391 None:intergenic 40.0%
AGCAACATAAGCATATTGGG+AGG + Chr5:92903574-92903593 None:intergenic 40.0%
AGTTGACAGGAACAAGAGAA+GGG + Chr5:92902682-92902701 None:intergenic 40.0%
ATACTATTTGGGAGAGCCTA+TGG + Chr5:92902204-92902223 None:intergenic 40.0%
ATCAAAACCGTAACTGACAC+TGG + Chr5:92906664-92906683 None:intergenic 40.0%
ATCCGCTATGAAGGGTTTAA+TGG - Chr5:92903966-92903985 MsG0580029148.01.T03:intron 40.0%
ATTCGAAACATGGCAACCAA+AGG - Chr5:92906051-92906070 MsG0580029148.01.T01:intron 40.0%
ATTCGCTTTCTTCTGTCCTT+TGG + Chr5:92906070-92906089 None:intergenic 40.0%
CACACGTATTCATGCTATTG+AGG + Chr5:92904583-92904602 None:intergenic 40.0%
CACGTATTCATGCTATTGAG+GGG + Chr5:92904581-92904600 None:intergenic 40.0%
CAGGTCACCAAAAATCTCAT+TGG + Chr5:92902286-92902305 None:intergenic 40.0%
CATGCTGTATGAAACCTTGT+TGG - Chr5:92902931-92902950 MsG0580029148.01.T03:intron 40.0%
CCGAATTACTATCTTGCTAG+TGG - Chr5:92904533-92904552 MsG0580029148.01.T01:CDS 40.0%
CGAGAATGTGCTTGATTGAA+TGG + Chr5:92906104-92906123 None:intergenic 40.0%
CGAGTAACAACTAGCCATAT+CGG + Chr5:92901636-92901655 None:intergenic 40.0%
CGCGTATTGTGAAACAATAG+TGG + Chr5:92906712-92906731 None:intergenic 40.0%
GATAGACTTTACCTACCACA+TGG + Chr5:92901885-92901904 None:intergenic 40.0%
GCAACATAAGCATATTGGGA+GGG + Chr5:92903573-92903592 None:intergenic 40.0%
GCACTAGAGAATATGAGACT+AGG - Chr5:92901444-92901463 MsG0580029148.01.T03:CDS 40.0%
GCAGCTGATCATATACACTA+AGG - Chr5:92907192-92907211 MsG0580029148.01.T01:CDS 40.0%
GCTGGTACTTGCATAATGAT+TGG - Chr5:92904508-92904527 MsG0580029148.01.T01:exon 40.0%
GGAGCTGACAAAATTAAACG+AGG - Chr5:92903326-92903345 MsG0580029148.01.T03:intron 40.0%
GTGTGTATGTGCTTGAATGA+AGG - Chr5:92904598-92904617 MsG0580029148.01.T01:CDS 40.0%
GTTCGTGAGTAATGAATCTG+AGG + Chr5:92904164-92904183 None:intergenic 40.0%
TAGGTGTTTGCGTAGTTATG+GGG - Chr5:92902382-92902401 MsG0580029148.01.T03:CDS 40.0%
TAGTTGACAGGAACAAGAGA+AGG + Chr5:92902683-92902702 None:intergenic 40.0%
TATAAGTGTCAGTGTCGTGT+CGG - Chr5:92903722-92903741 MsG0580029148.01.T03:intron 40.0%
TCACAGAAACTTACAGTCAG+AGG + Chr5:92907244-92907263 None:intergenic 40.0%
TCAGCGAAGAATTCGAAACA+TGG - Chr5:92906041-92906060 MsG0580029148.01.T01:intron 40.0%
TCTCATATTCTCTAGTGCAG+CGG + Chr5:92901442-92901461 None:intergenic 40.0%
TCTCTAGTGTCAATTTCCGT+GGG - Chr5:92905521-92905540 MsG0580029148.01.T01:intron 40.0%
TGACTCGAAGTGGTCATATA+TGG - Chr5:92904781-92904800 MsG0580029148.01.T01:intron 40.0%
TGCTGTTGACAAATCCGATA+TGG - Chr5:92901619-92901638 MsG0580029148.01.T03:intron 40.0%
TTCTCTAGTGTCAATTTCCG+TGG - Chr5:92905520-92905539 MsG0580029148.01.T01:intron 40.0%
! ATGGCTAGTTCCATAAGCAA+GGG + Chr5:92901866-92901885 None:intergenic 40.0%
! GAAGGGTGTATTACCAACAT+TGG - Chr5:92902810-92902829 MsG0580029148.01.T03:intron 40.0%
! GGTAATACGAAGCACTAACA+CGG - Chr5:92903666-92903685 MsG0580029148.01.T03:intron 40.0%
! TGTGCTTGAATGAAGGGTTT+TGG - Chr5:92904605-92904624 MsG0580029148.01.T01:CDS 40.0%
!! GAGCAATATTAGGTGTTGCT+TGG - Chr5:92906294-92906313 MsG0580029148.01.T01:intron 40.0%
!! GTGTTGTCAAATAGCGGATA+GGG - Chr5:92906516-92906535 MsG0580029148.01.T01:intron 40.0%
!! GTTTTGGATAGAACATGAGG+GGG - Chr5:92904621-92904640 MsG0580029148.01.T01:CDS 40.0%
!! TAAGTGTTGGTGCGACATAT+AGG - Chr5:92903776-92903795 MsG0580029148.01.T03:intron 40.0%
!! TGTGTTGTCAAATAGCGGAT+AGG - Chr5:92906515-92906534 MsG0580029148.01.T01:intron 40.0%
!!! AGGGTTTTGGATAGAACATG+AGG - Chr5:92904618-92904637 MsG0580029148.01.T01:CDS 40.0%
!!! GGGTTTTGGATAGAACATGA+GGG - Chr5:92904619-92904638 MsG0580029148.01.T01:CDS 40.0%
!!! GGTTTTGGATAGAACATGAG+GGG - Chr5:92904620-92904639 MsG0580029148.01.T01:CDS 40.0%
!!! TGCTGCAGCTGTTTTGTTTA+TGG - Chr5:92904031-92904050 MsG0580029148.01.T03:intron 40.0%
!!! TTTTGAAGTAGAGTGCGATG+TGG - Chr5:92907007-92907026 MsG0580029148.01.T01:CDS 40.0%
AAAATTACCTGCGGGAAGTG+TGG - Chr5:92904990-92905009 MsG0580029148.01.T01:intron 45.0%
AGACGCATAGAAAAGAGTCG+AGG - Chr5:92901776-92901795 MsG0580029148.01.T03:intron 45.0%
AGGTGTTTGCGTAGTTATGG+GGG - Chr5:92902383-92902402 MsG0580029148.01.T03:intron 45.0%
ATTGGCAACTAGGACCTGTT+TGG + Chr5:92902268-92902287 None:intergenic 45.0%
CAACGTACCATGACCAATGT+TGG + Chr5:92902826-92902845 None:intergenic 45.0%
CAAGAAGTTTATGACGAGGC+TGG - Chr5:92902772-92902791 MsG0580029148.01.T03:intron 45.0%
CAGTAGCGTAACTGCTTTAG+AGG - Chr5:92902979-92902998 MsG0580029148.01.T03:intron 45.0%
CTACATACGTACGAGAGTCA+AGG + Chr5:92907156-92907175 None:intergenic 45.0%
CTCTATATGGACTCAACCCA+CGG + Chr5:92905540-92905559 None:intergenic 45.0%
GAAGAAAATCGCGATTCTCC+GGG + Chr5:92906371-92906390 None:intergenic 45.0%
GAGAATATGAGACTAGGCAG+TGG - Chr5:92901450-92901469 MsG0580029148.01.T03:CDS 45.0%
GAGGTCATAAAAGTGGACGA+TGG - Chr5:92905579-92905598 MsG0580029148.01.T01:intron 45.0%
GATGTCAAAACTGCCATGTG+AGG - Chr5:92902420-92902439 MsG0580029148.01.T03:intron 45.0%
GCTAGTTGTTACTCGTATGC+AGG - Chr5:92901641-92901660 MsG0580029148.01.T03:intron 45.0%
GGGAACATTCTTTGCAAGCA+AGG + Chr5:92904087-92904106 None:intergenic 45.0%
TATACGGCAAAAGCCTCACA+TGG + Chr5:92902436-92902455 None:intergenic 45.0%
TATGGAACTAGCCATGTGGT+AGG - Chr5:92901871-92901890 MsG0580029148.01.T03:intron 45.0%
TGCTTATGGAACTAGCCATG+TGG - Chr5:92901867-92901886 MsG0580029148.01.T03:intron 45.0%
TGTGGCGAAATACCATTGGA+TGG + Chr5:92905780-92905799 None:intergenic 45.0%
TGTTGTGCCAGTGTCAGTTA+CGG - Chr5:92906654-92906673 MsG0580029148.01.T01:intron 45.0%
TTGACATGTAGTGTCGTCTC+TGG + Chr5:92906581-92906600 None:intergenic 45.0%
! AAGCTATTCCGGAGTGCTTA+TGG - Chr5:92902137-92902156 MsG0580029148.01.T03:intron 45.0%
! CATGGCTAGTTCCATAAGCA+AGG + Chr5:92901867-92901886 None:intergenic 45.0%
! TATGACGAGGCTGGAGTTTT+GGG - Chr5:92902781-92902800 MsG0580029148.01.T03:intron 45.0%
! TGGCTAGTTCCATAAGCAAG+GGG + Chr5:92901865-92901884 None:intergenic 45.0%
! TTATGACGAGGCTGGAGTTT+TGG - Chr5:92902780-92902799 MsG0580029148.01.T03:intron 45.0%
! TTTTGTTGCTATCGCAGGCA+AGG - Chr5:92903389-92903408 MsG0580029148.01.T03:intron 45.0%
!! TGTAGGTTATAACGGGTCGT+GGG - Chr5:92906251-92906270 MsG0580029148.01.T01:intron 45.0%
!! TTGTAGGTTATAACGGGTCG+TGG - Chr5:92906250-92906269 MsG0580029148.01.T01:intron 45.0%
!!! GGAGTTTTGGGTTTCTGGAA+GGG - Chr5:92902793-92902812 MsG0580029148.01.T03:intron 45.0%
!!! GTTGCTTTTGTTGCTATCGC+AGG - Chr5:92903384-92903403 MsG0580029148.01.T03:intron 45.0%
!!! TGGAGTTTTGGGTTTCTGGA+AGG - Chr5:92902792-92902811 MsG0580029148.01.T03:intron 45.0%
!!! TTTATTAATTTTTTAAAACT+TGG + Chr5:92905642-92905661 None:intergenic 5.0%
AAGGCATGTCCGAGTGTCTT+GGG + Chr5:92903750-92903769 None:intergenic 50.0%
ACCACTTCGAGTCACTAGCA+GGG + Chr5:92904775-92904794 None:intergenic 50.0%
ACTGTTGAGCCCCTTGCTTA+TGG - Chr5:92901853-92901872 MsG0580029148.01.T03:intron 50.0%
ATGAGACTAGGCAGTGGTGA+TGG - Chr5:92901456-92901475 MsG0580029148.01.T03:CDS 50.0%
CAACCCATTCAACAGAGTGC+TGG + Chr5:92904812-92904831 None:intergenic 50.0%
CATCTGACAACCTCGGATCA+GGG + Chr5:92901810-92901829 None:intergenic 50.0%
CGAAGTGGTCATATATGGCC+TGG - Chr5:92904786-92904805 MsG0580029148.01.T01:intron 50.0%
CTAGTTGGCTAGACCCTGTT+AGG - Chr5:92901986-92902005 MsG0580029148.01.T03:intron 50.0%
GGTGTTTGCGTAGTTATGGG+GGG - Chr5:92902384-92902403 MsG0580029148.01.T03:intron 50.0%
TATGGGGGGCCAACATAGTT+GGG - Chr5:92902398-92902417 MsG0580029148.01.T03:intron 50.0%
TCAACGGCATCTGACAACCT+CGG + Chr5:92901817-92901836 None:intergenic 50.0%
TCTCGATGAGTCTGCTTCTG+AGG - Chr5:92906119-92906138 MsG0580029148.01.T01:intron 50.0%
TGGCCAGCACTCTGTTGAAT+GGG - Chr5:92904806-92904825 MsG0580029148.01.T01:intron 50.0%
TTATGGGGGGCCAACATAGT+TGG - Chr5:92902397-92902416 MsG0580029148.01.T03:intron 50.0%
! AAAGGCATGTCCGAGTGTCT+TGG + Chr5:92903751-92903770 None:intergenic 50.0%
! TCATGCTATTGAGGGGTGCA+TGG + Chr5:92904574-92904593 None:intergenic 50.0%
!!! AGGCTGGAGTTTTGGGTTTC+TGG - Chr5:92902788-92902807 MsG0580029148.01.T03:intron 50.0%
AACGGGTCGTGGGTATGTTG+AGG - Chr5:92906261-92906280 MsG0580029148.01.T01:intron 55.0%
CTGGCCAGCACTCTGTTGAA+TGG - Chr5:92904805-92904824 MsG0580029148.01.T01:intron 55.0%
GACCACTTCGAGTCACTAGC+AGG + Chr5:92904776-92904795 None:intergenic 55.0%
GCATCTGACAACCTCGGATC+AGG + Chr5:92901811-92901830 None:intergenic 55.0%
GGAAAACTCTCCCTGATCCG+AGG - Chr5:92901797-92901816 MsG0580029148.01.T03:intron 55.0%
GGTGTCCGTGTCTGTGTAAG+TGG + Chr5:92906560-92906579 None:intergenic 55.0%
TCAAAAGCCACACTTCCCGC+AGG + Chr5:92905000-92905019 None:intergenic 55.0%
! CGAAGCACTAACACGGACAC+CGG - Chr5:92903673-92903692 MsG0580029148.01.T03:intron 55.0%
!! CATTCAACAGAGTGCTGGCC+AGG + Chr5:92904807-92904826 None:intergenic 55.0%
!! GGCAGTGGTGATGGATCAGT+TGG - Chr5:92901465-92901484 MsG0580029148.01.T03:CDS 55.0%
CGGACACCGGACACAACAGA+AGG - Chr5:92903686-92903705 MsG0580029148.01.T03:intron 60.0%
CTCGGAGCTGTCGCTAAGCT+TGG - Chr5:92903137-92903156 MsG0580029148.01.T03:intron 60.0%
GCCCTGCTAGTGACTCGAAG+TGG - Chr5:92904771-92904790 MsG0580029148.01.T01:intron 60.0%
! GTGTCGGTGCCCAAGACACT+CGG - Chr5:92903738-92903757 MsG0580029148.01.T03:intron 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 92901384 92907273 92901384 ID=MsG0580029148.01;Name=MsG0580029148.01
Chr5 mRNA 92904215 92907273 92904215 ID=MsG0580029148.01.T01;Parent=MsG0580029148.01;Name=MsG0580029148.01.T01;_AED=0.45;_eAED=0.45;_QI=0|1|0.88|1|0.87|0.77|9|261|261
Chr5 exon 92904318 92904717 92904318 ID=MsG0580029148.01.T01:exon:10325;Parent=MsG0580029148.01.T01
Chr5 exon 92904215 92904269 92904215 ID=MsG0580029148.01.T01:exon:10326;Parent=MsG0580029148.01.T01
Chr5 CDS 92907134 92907273 92907134 ID=MsG0580029148.01.T01:cds;Parent=MsG0580029148.01.T01
Chr5 CDS 92906995 92907049 92906995 ID=MsG0580029148.01.T01:cds;Parent=MsG0580029148.01.T01
Chr5 CDS 92906769 92906879 92906769 ID=MsG0580029148.01.T01:cds;Parent=MsG0580029148.01.T01
Chr5 CDS 92905820 92905888 92905820 ID=MsG0580029148.01.T01:cds;Parent=MsG0580029148.01.T01
Chr5 CDS 92905657 92905749 92905657 ID=MsG0580029148.01.T01:cds;Parent=MsG0580029148.01.T01
Chr5 CDS 92905461 92905529 92905461 ID=MsG0580029148.01.T01:cds;Parent=MsG0580029148.01.T01
Chr5 CDS 92905197 92905251 92905197 ID=MsG0580029148.01.T01:cds;Parent=MsG0580029148.01.T01
Chr5 CDS 92904524 92904717 92904524 ID=MsG0580029148.01.T01:cds;Parent=MsG0580029148.01.T01
Chr5 three_prime_UTR 92904318 92904523 92904318 ID=MsG0580029148.01.T01:three_prime_utr;Parent=MsG0580029148.01.T01
Chr5 three_prime_UTR 92904215 92904269 92904215 ID=MsG0580029148.01.T01:three_prime_utr;Parent=MsG0580029148.01.T01
Chr5 mRNA 92904213 92907273 92904213 ID=MsG0580029148.01.T02;Parent=MsG0580029148.01;Name=MsG0580029148.01.T02;_AED=0.45;_eAED=0.45;_QI=0|1|0.87|1|1|1|8|311|261
Chr5 exon 92904213 92904717 92904213 ID=MsG0580029148.01.T02:exon:10327;Parent=MsG0580029148.01.T02
Chr5 CDS 92907134 92907273 92907134 ID=MsG0580029148.01.T02:cds;Parent=MsG0580029148.01.T02
Chr5 CDS 92906995 92907049 92906995 ID=MsG0580029148.01.T02:cds;Parent=MsG0580029148.01.T02
Chr5 CDS 92906769 92906879 92906769 ID=MsG0580029148.01.T02:cds;Parent=MsG0580029148.01.T02
Chr5 CDS 92905820 92905888 92905820 ID=MsG0580029148.01.T02:cds;Parent=MsG0580029148.01.T02
Chr5 CDS 92905657 92905749 92905657 ID=MsG0580029148.01.T02:cds;Parent=MsG0580029148.01.T02
Chr5 CDS 92905461 92905529 92905461 ID=MsG0580029148.01.T02:cds;Parent=MsG0580029148.01.T02
Chr5 CDS 92905197 92905251 92905197 ID=MsG0580029148.01.T02:cds;Parent=MsG0580029148.01.T02
Chr5 CDS 92904524 92904717 92904524 ID=MsG0580029148.01.T02:cds;Parent=MsG0580029148.01.T02
Chr5 three_prime_UTR 92904213 92904523 92904213 ID=MsG0580029148.01.T02:three_prime_utr;Parent=MsG0580029148.01.T02
Chr5 mRNA 92901384 92904349 92901384 ID=MsG0580029148.01.T03;Parent=MsG0580029148.01;Name=MsG0580029148.01.T03;_AED=0.47;_eAED=0.51;_QI=0|0.33|0|1|0.33|0.25|4|0|171
Chr5 exon 92904328 92904349 92904328 ID=MsG0580029148.01.T03:exon:10328;Parent=MsG0580029148.01.T03
Chr5 exon 92902517 92902647 92902517 ID=MsG0580029148.01.T03:exon:10329;Parent=MsG0580029148.01.T03
Chr5 exon 92902220 92902401 92902220 ID=MsG0580029148.01.T03:exon:10330;Parent=MsG0580029148.01.T03
Chr5 exon 92901384 92901564 92901384 ID=MsG0580029148.01.T03:exon:10331;Parent=MsG0580029148.01.T03
Chr5 CDS 92904328 92904349 92904328 ID=MsG0580029148.01.T03:cds;Parent=MsG0580029148.01.T03
Chr5 CDS 92902517 92902647 92902517 ID=MsG0580029148.01.T03:cds;Parent=MsG0580029148.01.T03
Chr5 CDS 92902220 92902401 92902220 ID=MsG0580029148.01.T03:cds;Parent=MsG0580029148.01.T03
Chr5 CDS 92901384 92901564 92901384 ID=MsG0580029148.01.T03:cds;Parent=MsG0580029148.01.T03
Gene Sequence

>MsG0580029148.01.T02

ATGATACAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAATAGAGCTGAAGCCGCTGCACTAGAGAATATGAGACTAGGCAGTGGTGATGGATCAGTTGGAATGTTCTCCTCACTTATTGTTGCTGCTTTATCCGGCTGCGTTAACGTGCTGTTGACAAATCCGATATGGCTAGTTGTTACTCGTATGCAGACGCATAGAAAAGAGTCGAGGAAAACTCTCCCTGATCCGAGGTTGTCAGATGCCGTTGAACAAACATCACTTTCTACTGTTGAGCCCCTTGCTTATGGAACTAGCCATGTGATTCAAGAAGTTTATGACGAGGCTGGAGTTTTGGGTTTCTGGAAGGGTGTATTACCAACATTGGTCATGGTAAGCAATCCTTCTATACAGTTCATGCTGTATGAAACCTTGTTGGCGAAGTTGAAAAAAAGACGTGCTAGCAGTAGCGTAACTGCTTTAGAGATATTTCTTCTCGGAGCTGTCGCTAAGCTTGGAGCTACAGTTGTAACTTATCCTCTTCTTGTTGTGAAGGCAAGGCTTCAAGCTAGACAAGTTAACAATGGAGACAAGAGACACAATTATAAAGGTACACAGGATGCTATTATTAAGATGATCCGCTATGAAGGGTTTAATGGATTTTACAAAGGCATGGGAACCAAAATTGTACAAAGTGTTCTTGCTGCAGCTGTTTTGTTTATGGTGAAAGAGAAACTAGTCGAGCAGACTCGTTCCTTGCTTGCAAAGAATGTTCCCAACACTTTAAAGTCAAAGGTTGTGTGA

>MsG0580029148.01.T03

ATGCTTCCAAATGGAAAAATTCTTTCTTCTTCTCATCTGGGTCAAGCGAAGTCTCAGCGAAGAATTCGAAACATGGCAACCAAAGGACAGAAGAAAGCGAATCTGTTAGATCACCATTCAATCAAGCACATTCTCGATGAGTCTGCTTCTGAGGTTATAACGGGTCGTGGGTATGTTGAGGATGTGAAATTGAGCAATATTAGGTGTTGCTTGGGTCTGTCATCATCGTCATTGCTCTTTTTGCTCAGTTTTACAAGAAGAAGTTCCCGGAGAATCGCGATTTTCTTCTTGCTTGCATTGCCTTATATCCTTTCCTTACCTTTTATTTATTCACTGGATATGGGATTGTTTGTGTTTGTAAGTCTACTCATTCTTCTGCTTCATTGTTGTTTGATCCTTGACTCTCGTACGTATGTAGTCTTCAACTTGGTGTTGCAGCTGATCATATACACTAAGGAGAAGAATGCCATTCTGTTTACTTATCCTCTGACTGTAAGTTTCTGTGAACTTAGCTAA

>MsG0580029148.01.T01

ATGATACAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAATAGAGCTGAAGCCGCTGCACTAGAGAATATGAGACTAGGCAGTGGTGATGGATCAGTTGGAATGTTCTCCTCACTTATTGTTGCTGCTTTATCCGGCTGCGTTAACGTGCTGTTGACAAATCCGATATGGCTAGTTGTTACTCGTATGCAGACGCATAGAAAAGAGTCGAGGAAAACTCTCCCTGATCCGAGGTTGTCAGATGCCGTTGAACAAACATCACTTTCTACTGTTGAGCCCCTTGCTTATGGAACTAGCCATGTGATTCAAGAAGTTTATGACGAGGCTGGAGTTTTGGGTTTCTGGAAGGGTGTATTACCAACATTGGTCATGGTAAGCAATCCTTCTATACAGTTCATGCTGTATGAAACCTTGTTGGCGAAGTTGAAAAAAAGACGTGCTAGCAGTAGCGTAACTGCTTTAGAGATATTTCTTCTCGGAGCTGTCGCTAAGCTTGGAGCTACAGTTGTAACTTATCCTCTTCTTGTTGTGAAGGCAAGGCTTCAAGCTAGACAAGTTAACAATGGAGACAAGAGACACAATTATAAAGGTACACAGGATGCTATTATTAAGATGATCCGCTATGAAGGGTTTAATGGATTTTACAAAGGCATGGGAACCAAAATTGTACAAAGTGTTCTTGCTGCAGCTGTTTTGTTTATGGTGAAAGAGAAACTAGTCGAGCAGACTCGTTCCTTGCTTGCAAAGAATGTTCCCAACACTTTAAAGTCAAAGGTTGTGTGA

Protein sequence

>MsG0580029148.01.T02

MIQGVYYYFYQIFRNRAEAAALENMRLGSGDGSVGMFSSLIVAALSGCVNVLLTNPIWLVVTRMQTHRKESRKTLPDPRLSDAVEQTSLSTVEPLAYGTSHVIQEVYDEAGVLGFWKGVLPTLVMVSNPSIQFMLYETLLAKLKKRRASSSVTALEIFLLGAVAKLGATVVTYPLLVVKARLQARQVNNGDKRHNYKGTQDAIIKMIRYEGFNGFYKGMGTKIVQSVLAAAVLFMVKEKLVEQTRSLLAKNVPNTLKSKVV*

>MsG0580029148.01.T03

MLPNGKILSSSHLGQAKSQRRIRNMATKGQKKANLLDHHSIKHILDESASEVITGRGYVEDVKLSNIRCCLGLSSSSLLFLLSFTRRSSRRIAIFFLLALPYILSLPFIYSLDMGLFVFVSLLILLLHCCLILDSRTYVVFNLVLQLIIYTKEKNAILFTYPLTVSFCELS*

>MsG0580029148.01.T01

MIQGVYYYFYQIFRNRAEAAALENMRLGSGDGSVGMFSSLIVAALSGCVNVLLTNPIWLVVTRMQTHRKESRKTLPDPRLSDAVEQTSLSTVEPLAYGTSHVIQEVYDEAGVLGFWKGVLPTLVMVSNPSIQFMLYETLLAKLKKRRASSSVTALEIFLLGAVAKLGATVVTYPLLVVKARLQARQVNNGDKRHNYKGTQDAIIKMIRYEGFNGFYKGMGTKIVQSVLAAAVLFMVKEKLVEQTRSLLAKNVPNTLKSKVV*