AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040125.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040125.01.T01 MTR_7g084860 98.853 436 4 1 1 436 1 435 0.0 885
MsG0780040125.01.T01 MTR_6g478120 90.115 435 42 1 1 434 1 435 0.0 822
MsG0780040125.01.T01 MTR_4g103720 85.315 429 62 1 1 428 1 429 0.0 770
MsG0780040125.01.T01 MTR_6g478090 65.714 245 62 1 190 434 4 226 5.56e-104 308
MsG0780040125.01.T01 MTR_4g103730 79.618 157 29 1 130 286 6 159 2.08e-84 256
MsG0780040125.01.T01 MTR_6g081000 62.745 153 56 1 131 283 4 155 1.30e-58 189
MsG0780040125.01.T01 MTR_7g109660 73.529 68 15 2 34 99 16 82 1.05e-23 95.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040125.01.T01 AT3G26618 91.514 436 36 1 1 436 1 435 0.0 828
MsG0780040125.01.T01 AT1G12920 90.741 432 39 1 5 436 4 434 0.0 820
MsG0780040125.01.T01 AT5G47880 86.713 429 53 1 5 429 6 434 0.0 779
MsG0780040125.01.T01 AT5G47880 86.713 429 53 1 5 429 6 434 0.0 779

Find 87 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCATTGTATGGGAGAATT+TGG 0.171668 7:-73322516 MsG0780040125.01.T01:CDS
TGCAGAGGGTTTGGTGGTAT+TGG 0.226379 7:-73322266 MsG0780040125.01.T01:CDS
CCTCCTCTACCATGTTTCTT+TGG 0.261663 7:+73322950 None:intergenic
GTCTCGTATGGTGGGGAAAA+TGG 0.297905 7:-73322707 MsG0780040125.01.T01:CDS
GCGAATGAGTACAAAAGATT+TGG 0.305651 7:-73322338 MsG0780040125.01.T01:CDS
AAGATGTTGGGAGATGAATT+TGG 0.306796 7:-73323331 MsG0780040125.01.T01:CDS
TGCGGCCACATCTGCAGATT+TGG 0.309390 7:-73322396 MsG0780040125.01.T01:CDS
CGACCCTTCTTGAGATTTGT+TGG 0.312643 7:+73322295 None:intergenic
CTAGAATCTGATGACAAGTT+TGG 0.315461 7:-73323061 MsG0780040125.01.T01:CDS
AATCCAAATATGCACTTAAT+CGG 0.359874 7:+73322169 None:intergenic
CACATTGAAGGCTCTAGAAA+TGG 0.360512 7:-73322552 MsG0780040125.01.T01:CDS
ATCTGCAGATTTGGAGGTTC+AGG 0.366347 7:-73322387 MsG0780040125.01.T01:CDS
TGGCTCCAAGCACTGATTGC+CGG 0.392694 7:+73323278 None:intergenic
ATGTGGCCGCATCGCGGAAG+TGG 0.405903 7:+73322408 None:intergenic
AGAGGGTTTGGTGGTATTGG+AGG 0.406600 7:-73322263 MsG0780040125.01.T01:CDS
GAGACTGGTAAATATGTTTA+CGG 0.407711 7:-73322584 MsG0780040125.01.T01:CDS
AGATAAAGTGATGCATTGAT+TGG 0.409138 7:+73323124 None:intergenic
CGGTTGAAACACTCATTGTA+TGG 0.412463 7:-73322526 MsG0780040125.01.T01:CDS
TTTATTGTTATGGATGGAAA+TGG 0.413603 7:-73323037 MsG0780040125.01.T01:CDS
ATTCAAGAGAAACGCTTGAT+AGG 0.417924 7:-73322632 MsG0780040125.01.T01:CDS
TTCCACTTAATGTCCCGAAA+AGG 0.426411 7:+73323011 None:intergenic
TCCACTTAATGTCCCGAAAA+GGG 0.426867 7:+73323012 None:intergenic
TGTAATAAAGCATTTGAAGA+AGG 0.432701 7:-73322450 MsG0780040125.01.T01:CDS
CAGACAAGAATATTGAGATA+TGG 0.434895 7:-73323456 MsG0780040125.01.T01:CDS
ACTAGTCAGCCTAATGTTGC+TGG 0.435213 7:-73322827 MsG0780040125.01.T01:CDS
TAATGTTGCTGGACTCATAC+TGG 0.438513 7:-73322816 MsG0780040125.01.T01:CDS
AAACATATTTACCAGTCTCT+TGG 0.438527 7:+73322588 None:intergenic
CTGGAAGCTGCAAGAGGTAA+TGG 0.449382 7:-73323409 MsG0780040125.01.T01:CDS
ACATCAAGAGTAGGGTAAAC+CGG 0.459780 7:-73323297 MsG0780040125.01.T01:CDS
GTATAAAGAACCAATCCATT+TGG 0.460218 7:+73323211 None:intergenic
AGTATGAGTCCAGCAACATT+AGG 0.468191 7:+73322818 None:intergenic
TATAACAAGGTTCCTCCAAA+TGG 0.471094 7:-73323226 MsG0780040125.01.T01:CDS
ATCTCGTGTCACTAAGATGT+TGG 0.473352 7:-73323344 MsG0780040125.01.T01:CDS
CGGAGTTGATGACACATTGA+AGG 0.474084 7:-73322564 MsG0780040125.01.T01:CDS
CAAGGTTCCTCCAAATGGAT+TGG 0.477410 7:-73323221 MsG0780040125.01.T01:CDS
CTTGCCGTCCTCAGTGAGAA+TGG 0.478058 7:+73323183 None:intergenic
AATGGATTGGTTCTTTATAC+CGG 0.484935 7:-73323208 MsG0780040125.01.T01:CDS
TCTCGTGTCACTAAGATGTT+GGG 0.490357 7:-73323343 MsG0780040125.01.T01:CDS
ACATTAGGCTGACTAGTAGC+AGG 0.499450 7:+73322833 None:intergenic
CAAAAGATTTGGATGCTCGC+TGG 0.500903 7:-73322327 MsG0780040125.01.T01:CDS
ACATTGAAGGCTCTAGAAAT+GGG 0.514674 7:-73322551 MsG0780040125.01.T01:CDS
GGGAGAATTTGGATATTACT+AGG 0.521356 7:-73322505 MsG0780040125.01.T01:CDS
GTAATAAAGCATTTGAAGAA+GGG 0.522658 7:-73322449 MsG0780040125.01.T01:CDS
CCTCTGTTGAGCAGAAGTAA+TGG 0.522824 7:+73323258 None:intergenic
GGCCACATCTGCAGATTTGG+AGG 0.524825 7:-73322393 MsG0780040125.01.T01:CDS
GTAAACCGGCAATCAGTGCT+TGG 0.540063 7:-73323283 MsG0780040125.01.T01:CDS
CTGCTTCAAACATCAAGAGT+AGG 0.540306 7:-73323306 MsG0780040125.01.T01:CDS
TTCGCAAACCACTCAAGTAA+TGG 0.547585 7:+73322356 None:intergenic
GAAGAGATAAGCCAAGAGAC+TGG 0.550060 7:-73322599 MsG0780040125.01.T01:CDS
TGAGGACGGCAAGGAAAAGA+AGG 0.553356 7:-73323173 MsG0780040125.01.T01:CDS
GTGGTTGATGTCTCGTATGG+TGG 0.555643 7:-73322716 MsG0780040125.01.T01:CDS
AACCTCCAAATCTGCAGATG+TGG 0.562932 7:+73322391 None:intergenic
AGAAGATGCCATTACTTGAG+TGG 0.565327 7:-73322364 MsG0780040125.01.T01:CDS
GATGCATTGATTGGTTTGAA+AGG 0.571596 7:+73323133 None:intergenic
GTGACCAACAAATCTCAAGA+AGG 0.573488 7:-73322299 MsG0780040125.01.T01:CDS
TGCTTCAAACATCAAGAGTA+GGG 0.575365 7:-73323305 MsG0780040125.01.T01:CDS
TAAAGAACCAATCCATTTGG+AGG 0.576280 7:+73323214 None:intergenic
GTCCTCAGTGAGAATGGTAC+CGG 0.581083 7:+73323189 None:intergenic
CGAATGATCTGATATCAAGC+TGG 0.590096 7:+73322228 None:intergenic
GATGAGTTATCTGATGATGA+TGG 0.590510 7:-73322206 MsG0780040125.01.T01:CDS
TGGTTGATGTCTCGTATGGT+GGG 0.591547 7:-73322715 MsG0780040125.01.T01:CDS
CTACCAAAGAAACATGGTAG+AGG 0.592428 7:-73322953 MsG0780040125.01.T01:CDS
ATTCTTGTCTGATTCACCAT+CGG 0.594219 7:+73323468 None:intergenic
GTTGCTGGACTCATACTGGC+TGG 0.598808 7:-73322812 MsG0780040125.01.T01:CDS
CATTCTCACTGAGGACGGCA+AGG 0.604123 7:-73323182 MsG0780040125.01.T01:CDS
GGTTGAAACACTCATTGTAT+GGG 0.621105 7:-73322525 MsG0780040125.01.T01:CDS
AACGTGGTTGATGTCTCGTA+TGG 0.621452 7:-73322719 MsG0780040125.01.T01:CDS
CCAAAGAAACATGGTAGAGG+AGG 0.625338 7:-73322950 MsG0780040125.01.T01:CDS
TGACCAACAAATCTCAAGAA+GGG 0.625562 7:-73322298 MsG0780040125.01.T01:CDS
CCATTACTTCTGCTCAACAG+AGG 0.649740 7:-73323258 MsG0780040125.01.T01:CDS
GGTACCATTCTCACTGAGGA+CGG 0.651299 7:-73323187 MsG0780040125.01.T01:CDS
GAAGGCTCTAGAAATGGGTG+CGG 0.653960 7:-73322546 MsG0780040125.01.T01:CDS
ACACGAGATATTTGATCACG+TGG 0.654304 7:+73323358 None:intergenic
CATTAGGCTGACTAGTAGCA+GGG 0.656179 7:+73322834 None:intergenic
AAAGGACTGGAAGCTGCAAG+AGG 0.664338 7:-73323415 MsG0780040125.01.T01:CDS
CTTTATTACAATCTCACCAG+TGG 0.665088 7:+73322463 None:intergenic
TCAAAGCCACTTCCGCGATG+CGG 0.668435 7:-73322414 MsG0780040125.01.T01:CDS
GAGGTTGAAACTATATAACA+AGG 0.687653 7:-73323239 MsG0780040125.01.T01:CDS
AGGGTTGATGTAAAACTGAG+TGG 0.688267 7:+73322853 None:intergenic
CTGCAGATGTGGCCGCATCG+CGG 0.688811 7:+73322402 None:intergenic
TCTGCATAAACAATGGCCGA+TGG 0.701549 7:-73323484 None:intergenic
GGTTGATGTCTCGTATGGTG+GGG 0.707328 7:-73322714 MsG0780040125.01.T01:CDS
CGAGATATTTGATCACGTGG+AGG 0.714871 7:+73323361 None:intergenic
GTTGATCTACCAAAGAAACA+TGG 0.720655 7:-73322959 MsG0780040125.01.T01:CDS
ATTAAGTGGAAATACTCGCG+AGG 0.721816 7:-73322999 MsG0780040125.01.T01:CDS
TGATGATGATGGAGTGTACG+AGG 0.728062 7:-73322195 MsG0780040125.01.T01:CDS
TACCGGTACCATTCTCACTG+AGG 0.737721 7:-73323191 MsG0780040125.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TTTATTGTTATGGATGGAAA+TGG - Chr7:73322619-73322638 MsG0780040125.01.T01:CDS 25.0%
!! AAGATCAAAAAGTTGATCAA+AGG - Chr7:73322223-73322242 MsG0780040125.01.T01:CDS 25.0%
!! GTAATAAAGCATTTGAAGAA+GGG - Chr7:73323207-73323226 MsG0780040125.01.T01:CDS 25.0%
!! TGTAATAAAGCATTTGAAGA+AGG - Chr7:73323206-73323225 MsG0780040125.01.T01:CDS 25.0%
!!! CAAGTTTGGTTTTATTGTTA+TGG - Chr7:73322609-73322628 MsG0780040125.01.T01:CDS 25.0%
!!! TTTGGTTTTATTGTTATGGA+TGG - Chr7:73322613-73322632 MsG0780040125.01.T01:CDS 25.0%
AAACATATTTACCAGTCTCT+TGG + Chr7:73323071-73323090 None:intergenic 30.0%
CAGACAAGAATATTGAGATA+TGG - Chr7:73322200-73322219 MsG0780040125.01.T01:CDS 30.0%
GAGACTGGTAAATATGTTTA+CGG - Chr7:73323072-73323091 MsG0780040125.01.T01:CDS 30.0%
GAGGTTGAAACTATATAACA+AGG - Chr7:73322417-73322436 MsG0780040125.01.T01:CDS 30.0%
GTATAAAGAACCAATCCATT+TGG + Chr7:73322448-73322467 None:intergenic 30.0%
! AGATAAAGTGATGCATTGAT+TGG + Chr7:73322535-73322554 None:intergenic 30.0%
!! AATATTTTTGCTTGCAAACG+AGG + Chr7:73322916-73322935 None:intergenic 30.0%
!! AATGGATTGGTTCTTTATAC+CGG - Chr7:73322448-73322467 MsG0780040125.01.T01:CDS 30.0%
AAAAACGACACAATTACGTC+AGG - Chr7:73322764-73322783 MsG0780040125.01.T01:CDS 35.0%
AAGATGTTGGGAGATGAATT+TGG - Chr7:73322325-73322344 MsG0780040125.01.T01:CDS 35.0%
ACTCATTGTATGGGAGAATT+TGG - Chr7:73323140-73323159 MsG0780040125.01.T01:CDS 35.0%
ATTCAAGAGAAACGCTTGAT+AGG - Chr7:73323024-73323043 MsG0780040125.01.T01:CDS 35.0%
ATTCTTGTCTGATTCACCAT+CGG + Chr7:73322191-73322210 None:intergenic 35.0%
CTAGAATCTGATGACAAGTT+TGG - Chr7:73322595-73322614 MsG0780040125.01.T01:CDS 35.0%
CTTTATTACAATCTCACCAG+TGG + Chr7:73323196-73323215 None:intergenic 35.0%
GCAAGCAAAAATATTGAACG+TGG - Chr7:73322921-73322940 MsG0780040125.01.T01:CDS 35.0%
GCGAATGAGTACAAAAGATT+TGG - Chr7:73323318-73323337 MsG0780040125.01.T01:CDS 35.0%
GGGAGAATTTGGATATTACT+AGG - Chr7:73323151-73323170 MsG0780040125.01.T01:CDS 35.0%
GGTTGAAACACTCATTGTAT+GGG - Chr7:73323131-73323150 MsG0780040125.01.T01:CDS 35.0%
GTTGATCTACCAAAGAAACA+TGG - Chr7:73322697-73322716 MsG0780040125.01.T01:CDS 35.0%
TAAAGAACCAATCCATTTGG+AGG + Chr7:73322445-73322464 None:intergenic 35.0%
TATAACAAGGTTCCTCCAAA+TGG - Chr7:73322430-73322449 MsG0780040125.01.T01:CDS 35.0%
TGACCAACAAATCTCAAGAA+GGG - Chr7:73323358-73323377 MsG0780040125.01.T01:CDS 35.0%
TGCTTCAAACATCAAGAGTA+GGG - Chr7:73322351-73322370 MsG0780040125.01.T01:CDS 35.0%
! CAAAAAGTTGATCAAAGGAC+TGG - Chr7:73322228-73322247 MsG0780040125.01.T01:CDS 35.0%
! GATGAGTTATCTGATGATGA+TGG - Chr7:73323450-73323469 MsG0780040125.01.T01:CDS 35.0%
!! ACATTGAAGGCTCTAGAAAT+GGG - Chr7:73323105-73323124 MsG0780040125.01.T01:CDS 35.0%
!! GATGCATTGATTGGTTTGAA+AGG + Chr7:73322526-73322545 None:intergenic 35.0%
!!! AATTGTGTCGTTTTTCCATC+CGG + Chr7:73322759-73322778 None:intergenic 35.0%
ACACGAGATATTTGATCACG+TGG + Chr7:73322301-73322320 None:intergenic 40.0%
ACATCAAGAGTAGGGTAAAC+CGG - Chr7:73322359-73322378 MsG0780040125.01.T01:CDS 40.0%
AGAAGATGCCATTACTTGAG+TGG - Chr7:73323292-73323311 MsG0780040125.01.T01:CDS 40.0%
AGTATGAGTCCAGCAACATT+AGG + Chr7:73322841-73322860 None:intergenic 40.0%
ATTAAGTGGAAATACTCGCG+AGG - Chr7:73322657-73322676 MsG0780040125.01.T01:CDS 40.0%
CGAATGATCTGATATCAAGC+TGG + Chr7:73323431-73323450 None:intergenic 40.0%
CGGTTGAAACACTCATTGTA+TGG - Chr7:73323130-73323149 MsG0780040125.01.T01:CDS 40.0%
CTACCAAAGAAACATGGTAG+AGG - Chr7:73322703-73322722 MsG0780040125.01.T01:CDS 40.0%
CTGCTTCAAACATCAAGAGT+AGG - Chr7:73322350-73322369 MsG0780040125.01.T01:CDS 40.0%
GTGACCAACAAATCTCAAGA+AGG - Chr7:73323357-73323376 MsG0780040125.01.T01:CDS 40.0%
TAATGTTGCTGGACTCATAC+TGG - Chr7:73322840-73322859 MsG0780040125.01.T01:CDS 40.0%
TCCACTTAATGTCCCGAAAA+GGG + Chr7:73322647-73322666 None:intergenic 40.0%
TTCCACTTAATGTCCCGAAA+AGG + Chr7:73322648-73322667 None:intergenic 40.0%
TTCGCAAACCACTCAAGTAA+TGG + Chr7:73323303-73323322 None:intergenic 40.0%
! ATCTCGTGTCACTAAGATGT+TGG - Chr7:73322312-73322331 MsG0780040125.01.T01:CDS 40.0%
! ATGGAAATGGAACCCTTTTC+GGG - Chr7:73322632-73322651 MsG0780040125.01.T01:CDS 40.0%
! GATGGAAATGGAACCCTTTT+CGG - Chr7:73322631-73322650 MsG0780040125.01.T01:CDS 40.0%
! TCTCGTGTCACTAAGATGTT+GGG - Chr7:73322313-73322332 MsG0780040125.01.T01:CDS 40.0%
!! AGGGTTGATGTAAAACTGAG+TGG + Chr7:73322806-73322825 None:intergenic 40.0%
!! CACATTGAAGGCTCTAGAAA+TGG - Chr7:73323104-73323123 MsG0780040125.01.T01:CDS 40.0%
AACCTCCAAATCTGCAGATG+TGG + Chr7:73323268-73323287 None:intergenic 45.0%
ACATTAGGCTGACTAGTAGC+AGG + Chr7:73322826-73322845 None:intergenic 45.0%
ACTAGTCAGCCTAATGTTGC+TGG - Chr7:73322829-73322848 MsG0780040125.01.T01:CDS 45.0%
ATCTGCAGATTTGGAGGTTC+AGG - Chr7:73323269-73323288 MsG0780040125.01.T01:CDS 45.0%
CAAAAGATTTGGATGCTCGC+TGG - Chr7:73323329-73323348 MsG0780040125.01.T01:CDS 45.0%
CAAGGTTCCTCCAAATGGAT+TGG - Chr7:73322435-73322454 MsG0780040125.01.T01:CDS 45.0%
CATTAGGCTGACTAGTAGCA+GGG + Chr7:73322825-73322844 None:intergenic 45.0%
CCAAAGAAACATGGTAGAGG+AGG - Chr7:73322706-73322725 MsG0780040125.01.T01:CDS 45.0%
CCATTACTTCTGCTCAACAG+AGG - Chr7:73322398-73322417 MsG0780040125.01.T01:CDS 45.0%
CCTCCTCTACCATGTTTCTT+TGG + Chr7:73322709-73322728 None:intergenic 45.0%
CCTCTGTTGAGCAGAAGTAA+TGG + Chr7:73322401-73322420 None:intergenic 45.0%
CGACCCTTCTTGAGATTTGT+TGG + Chr7:73323364-73323383 None:intergenic 45.0%
CGAGATATTTGATCACGTGG+AGG + Chr7:73322298-73322317 None:intergenic 45.0%
GAAGAGATAAGCCAAGAGAC+TGG - Chr7:73323057-73323076 MsG0780040125.01.T01:CDS 45.0%
GTGCTGAAAAATGCTACCAC+TGG - Chr7:73323177-73323196 MsG0780040125.01.T01:CDS 45.0%
! AACGTGGTTGATGTCTCGTA+TGG - Chr7:73322937-73322956 MsG0780040125.01.T01:CDS 45.0%
! TGGTTGATGTCTCGTATGGT+GGG - Chr7:73322941-73322960 MsG0780040125.01.T01:CDS 45.0%
!! ACCCTTTTCGGGACATTAAG+TGG - Chr7:73322643-73322662 MsG0780040125.01.T01:CDS 45.0%
!! CGGAGTTGATGACACATTGA+AGG - Chr7:73323092-73323111 MsG0780040125.01.T01:CDS 45.0%
!! TGATGATGATGGAGTGTACG+AGG - Chr7:73323461-73323480 MsG0780040125.01.T01:CDS 45.0%
AAAGGACTGGAAGCTGCAAG+AGG - Chr7:73322241-73322260 MsG0780040125.01.T01:CDS 50.0%
CTGGAAGCTGCAAGAGGTAA+TGG - Chr7:73322247-73322266 MsG0780040125.01.T01:CDS 50.0%
GGTACCATTCTCACTGAGGA+CGG - Chr7:73322469-73322488 MsG0780040125.01.T01:CDS 50.0%
GTAAACCGGCAATCAGTGCT+TGG - Chr7:73322373-73322392 MsG0780040125.01.T01:CDS 50.0%
GTCCTCAGTGAGAATGGTAC+CGG + Chr7:73322470-73322489 None:intergenic 50.0%
TACCGGTACCATTCTCACTG+AGG - Chr7:73322465-73322484 MsG0780040125.01.T01:CDS 50.0%
TGAGGACGGCAAGGAAAAGA+AGG - Chr7:73322483-73322502 MsG0780040125.01.T01:CDS 50.0%
! AAGGGTCGCAGTTTTGCAGA+GGG - Chr7:73323376-73323395 MsG0780040125.01.T01:CDS 50.0%
! CAGTTTTGCAGAGGGTTTGG+TGG - Chr7:73323384-73323403 MsG0780040125.01.T01:CDS 50.0%
! CTTTGCGTTTTGCTCGTCTC+CGG - Chr7:73322737-73322756 MsG0780040125.01.T01:CDS 50.0%
! GGTTGATGTCTCGTATGGTG+GGG - Chr7:73322942-73322961 MsG0780040125.01.T01:CDS 50.0%
! GTCTCGTATGGTGGGGAAAA+TGG - Chr7:73322949-73322968 MsG0780040125.01.T01:CDS 50.0%
! GTGGTTGATGTCTCGTATGG+TGG - Chr7:73322940-73322959 MsG0780040125.01.T01:CDS 50.0%
! TCGCAGTTTTGCAGAGGGTT+TGG - Chr7:73323381-73323400 MsG0780040125.01.T01:CDS 50.0%
!! AGAGGGTTTGGTGGTATTGG+AGG - Chr7:73323393-73323412 MsG0780040125.01.T01:CDS 50.0%
!! GAAGGCTCTAGAAATGGGTG+CGG - Chr7:73323110-73323129 MsG0780040125.01.T01:CDS 50.0%
!! TGCAGAGGGTTTGGTGGTAT+TGG - Chr7:73323390-73323409 MsG0780040125.01.T01:CDS 50.0%
CATTCTCACTGAGGACGGCA+AGG - Chr7:73322474-73322493 MsG0780040125.01.T01:CDS 55.0%
CTTGCCGTCCTCAGTGAGAA+TGG + Chr7:73322476-73322495 None:intergenic 55.0%
GGCCACATCTGCAGATTTGG+AGG - Chr7:73323263-73323282 MsG0780040125.01.T01:CDS 55.0%
GTTGCTGGACTCATACTGGC+TGG - Chr7:73322844-73322863 MsG0780040125.01.T01:CDS 55.0%
TCAAAGCCACTTCCGCGATG+CGG - Chr7:73323242-73323261 MsG0780040125.01.T01:CDS 55.0%
TGCGGCCACATCTGCAGATT+TGG - Chr7:73323260-73323279 MsG0780040125.01.T01:CDS 55.0%
! GAAGGGTCGCAGTTTTGCAG+AGG - Chr7:73323375-73323394 MsG0780040125.01.T01:CDS 55.0%
!! TGGCTCCAAGCACTGATTGC+CGG + Chr7:73322381-73322400 None:intergenic 55.0%
! GCGTTTTGCTCGTCTCCGGA+TGG - Chr7:73322741-73322760 MsG0780040125.01.T01:CDS 60.0%
ATGTGGCCGCATCGCGGAAG+TGG + Chr7:73323251-73323270 None:intergenic 65.0%
CTGCAGATGTGGCCGCATCG+CGG + Chr7:73323257-73323276 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 73322184 73323494 73322184 ID=MsG0780040125.01;Name=MsG0780040125.01
Chr7 mRNA 73322184 73323494 73322184 ID=MsG0780040125.01.T01;Parent=MsG0780040125.01;Name=MsG0780040125.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|436
Chr7 exon 73322184 73323494 73322184 ID=MsG0780040125.01.T01:exon:14454;Parent=MsG0780040125.01.T01
Chr7 CDS 73322184 73323494 73322184 ID=MsG0780040125.01.T01:cds;Parent=MsG0780040125.01.T01
Gene Sequence

>MsG0780040125.01.T01

ATGGCCGATGGTGAATCAGACAAGAATATTGAGATATGGAAGATCAAAAAGTTGATCAAAGGACTGGAAGCTGCAAGAGGTAATGGTACTAGTATGATTTCTCTGATAATGCCTCCACGTGATCAAATATCTCGTGTCACTAAGATGTTGGGAGATGAATTTGGAACTGCTTCAAACATCAAGAGTAGGGTAAACCGGCAATCAGTGCTTGGAGCCATTACTTCTGCTCAACAGAGGTTGAAACTATATAACAAGGTTCCTCCAAATGGATTGGTTCTTTATACCGGTACCATTCTCACTGAGGACGGCAAGGAAAAGAAGGTGACATTTGATTTTGAACCTTTCAAACCAATCAATGCATCACTTTATCTCTGCGACAACAAATTTCACACAGAAGCTCTAAATGAACTTCTAGAATCTGATGACAAGTTTGGTTTTATTGTTATGGATGGAAATGGAACCCTTTTCGGGACATTAAGTGGAAATACTCGCGAGGTGCTTCATAAATTTACTGTTGATCTACCAAAGAAACATGGTAGAGGAGGACAGTCAGCTTTGCGTTTTGCTCGTCTCCGGATGGAAAAACGACACAATTACGTCAGGAAGACTGCAGAACTTGCCACTCAGTTTTACATCAACCCTGCTACTAGTCAGCCTAATGTTGCTGGACTCATACTGGCTGGTTCAGCTGATTTCAAGACTGAGCTGAGTCAATCAGATATGTTTGATCCTCGTTTGCAAGCAAAAATATTGAACGTGGTTGATGTCTCGTATGGTGGGGAAAATGGCTTTAATCAAGCTATTGAATTATCTGCAGAGATTCTATCTAATGTGAAGTTCATTCAAGAGAAACGCTTGATAGGAAAATACTTTGAAGAGATAAGCCAAGAGACTGGTAAATATGTTTACGGAGTTGATGACACATTGAAGGCTCTAGAAATGGGTGCGGTTGAAACACTCATTGTATGGGAGAATTTGGATATTACTAGGTATGTGCTGAAAAATGCTACCACTGGTGAGATTGTAATAAAGCATTTGAAGAAGGGACAAGAAAGTGATCAAAGCCACTTCCGCGATGCGGCCACATCTGCAGATTTGGAGGTTCAGGAGAAGATGCCATTACTTGAGTGGTTTGCGAATGAGTACAAAAGATTTGGATGCTCGCTGGAATTCGTGACCAACAAATCTCAAGAAGGGTCGCAGTTTTGCAGAGGGTTTGGTGGTATTGGAGGTATGCTTCGCTACCAGCTTGATATCAGATCATTCGATGAGTTATCTGATGATGATGGAGTGTACGAGGATTCCGATTAA

Protein sequence

>MsG0780040125.01.T01

MADGESDKNIEIWKIKKLIKGLEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTEDGKEKKVTFDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQETGKYVYGVDDTLKALEMGAVETLIVWENLDITRYVLKNATTGEIVIKHLKKGQESDQSHFRDAATSADLEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDIRSFDELSDDDGVYEDSD*