AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041423.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041423.01.T01 MTR_7g110660 95.411 523 7 2 1 520 88 596 0.0 1028
MsG0780041423.01.T01 MTR_7g110660 95.411 523 7 2 1 520 1 509 0.0 1022
MsG0780041423.01.T01 MTR_3g114570 72.292 480 119 1 41 520 3 468 0.0 733
MsG0780041423.01.T01 MTR_3g048190 69.897 485 132 1 36 520 11 481 0.0 684
MsG0780041423.01.T01 MTR_3g048190 69.897 485 132 1 36 520 4 474 0.0 683
MsG0780041423.01.T01 MTR_3g100910 40.084 474 257 7 49 516 68 520 2.62e-127 384
MsG0780041423.01.T01 MTR_3g114550 62.545 275 52 2 100 374 1 224 1.66e-117 347
MsG0780041423.01.T02 MTR_7g110660 95.411 523 7 2 1 520 88 596 0.0 1028
MsG0780041423.01.T02 MTR_7g110660 95.411 523 7 2 1 520 1 509 0.0 1022
MsG0780041423.01.T02 MTR_3g114570 72.292 480 119 1 41 520 3 468 0.0 733
MsG0780041423.01.T02 MTR_3g048190 69.897 485 132 1 36 520 11 481 0.0 684
MsG0780041423.01.T02 MTR_3g048190 69.897 485 132 1 36 520 4 474 0.0 683
MsG0780041423.01.T02 MTR_3g100910 40.084 474 257 7 49 516 68 520 2.62e-127 384
MsG0780041423.01.T02 MTR_3g114550 62.545 275 52 2 100 374 1 224 1.66e-117 347
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041423.01.T01 AT3G62120 82.724 492 70 2 29 520 21 497 0.0 850
MsG0780041423.01.T01 AT3G62120 82.724 492 70 2 29 520 34 510 0.0 848
MsG0780041423.01.T01 AT3G62120 82.724 492 70 2 29 520 34 510 0.0 848
MsG0780041423.01.T01 AT5G52520 39.279 499 276 5 24 516 44 521 2.75e-128 386
MsG0780041423.01.T01 AT5G10880 63.500 200 67 2 326 519 89 288 3.46e-79 251
MsG0780041423.01.T02 AT3G62120 82.724 492 70 2 29 520 21 497 0.0 850
MsG0780041423.01.T02 AT3G62120 82.724 492 70 2 29 520 34 510 0.0 848
MsG0780041423.01.T02 AT3G62120 82.724 492 70 2 29 520 34 510 0.0 848
MsG0780041423.01.T02 AT5G52520 39.279 499 276 5 24 516 44 521 2.75e-128 386
MsG0780041423.01.T02 AT5G10880 63.500 200 67 2 326 519 89 288 3.46e-79 251

Find 23 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCGGTAACATTCTGTTTC+AGG 0.161245 7:+90696382 MsG0780041423.01.T02:five_prime_UTR
TAACCTGATTGTTGTGGTTT+TGG 0.279807 7:-90696498 None:intergenic
GAAGAAGAAATGTTTATGAA+TGG 0.406568 7:-90696349 None:intergenic
GGAAAGAAGGCGAGAGAGAA+TGG 0.410760 7:-90696297 None:intergenic
TAACATTCTGTTTCAGGATC+AGG 0.419272 7:+90696388 MsG0780041423.01.T02:five_prime_UTR
GCGATGGTGCCGGCCGTAAG+AGG 0.443633 7:-90696263 None:intergenic
TCGTCATCCTTCACAATGGC+GGG 0.453103 7:+90696414 MsG0780041423.01.T02:exon
ACCTTGTTGAGTTGGAAAGA+AGG 0.462316 7:-90696310 None:intergenic
CAACCAAAACCACAACAATC+AGG 0.476529 7:+90696495 MsG0780041423.01.T02:CDS
CTCGTCATCCTTCACAATGG+CGG 0.504304 7:+90696413 MsG0780041423.01.T02:exon
ACGGTGTTACCTTGTTGAGT+TGG 0.512610 7:-90696318 None:intergenic
CTTCTTCTTCAATTCCTCAT+CGG 0.520274 7:+90696365 MsG0780041423.01.T02:five_prime_UTR
ATCGGTCCCCGCCATTGTGA+AGG 0.522242 7:-90696421 None:intergenic
AGAGAGAGAATCTCCTCTTA+CGG 0.530261 7:+90696250 MsG0780041423.01.T02:five_prime_UTR
GCGTGCAAGAGCGATGGTGC+CGG 0.533896 7:-90696273 None:intergenic
TTTATGAATGGATTGAGAAA+CGG 0.543062 7:-90696337 None:intergenic
GTGAAATAACCTGATTGTTG+TGG 0.560703 7:-90696504 None:intergenic
AGAGAATCTCCTCTTACGGC+CGG 0.571878 7:+90696254 MsG0780041423.01.T02:five_prime_UTR
GCCTTCTTTCCAACTCAACA+AGG 0.586671 7:+90696309 MsG0780041423.01.T02:five_prime_UTR
CGTCATCCTTCACAATGGCG+GGG 0.607064 7:+90696415 MsG0780041423.01.T02:exon
AATGGAGCGTGCAAGAGCGA+TGG 0.607251 7:-90696279 None:intergenic
GAAACAGAATGTTACCGATG+AGG 0.670384 7:-90696379 None:intergenic
GTGCTCGTCATCCTTCACAA+TGG 0.698351 7:+90696410 MsG0780041423.01.T02:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - Chr7:90698751-90698732 None:intergenic 0.0%
!! AAAATTAAATGAGATTTATT+CGG - Chr7:90700632-90700651 None:intergenic 10.0%
!! TAAATTTAATAGCTAATTTA+TGG - Chr7:90699395-90699414 None:intergenic 10.0%
!! ATATCAAAATATTAAGCATA+AGG - Chr7:90701396-90701415 None:intergenic 15.0%
!! CTAACTATAATAATATACAT+TGG - Chr7:90701364-90701383 None:intergenic 15.0%
!!! CAAATACTTAATTTTTCAAA+GGG - Chr7:90699314-90699333 None:intergenic 15.0%
!!! CCATAAAACAAATATTTTTA+AGG - Chr7:90697664-90697683 None:intergenic 15.0%
!!! CCTTAAAAATATTTGTTTTA+TGG + Chr7:90697661-90697680 MsG0780041423.01.T02:intron 15.0%
!!! TCAAATACTTAATTTTTCAA+AGG - Chr7:90699315-90699334 None:intergenic 15.0%
!!! TGTTGTTTTTTTTTTTTAAC+TGG - Chr7:90701169-90701188 None:intergenic 15.0%
!!! TTTATCCCAATTTTAATTTT+TGG - Chr7:90699105-90699124 None:intergenic 15.0%
!! AATAATATACATTGGACAAT+CGG - Chr7:90701356-90701375 None:intergenic 20.0%
!! ACTTCTCCAAAAATTAAAAT+TGG + Chr7:90699096-90699115 MsG0780041423.01.T02:intron 20.0%
!! AGAAAGACAAAAATAAAAAG+AGG - Chr7:90699048-90699067 None:intergenic 20.0%
!! ATAAACTATGAAAATGAGAA+GGG + Chr7:90700104-90700123 MsG0780041423.01.T02:CDS 20.0%
!! ATGTATTTAAATTTACGGTT+TGG + Chr7:90701431-90701450 MsG0780041423.01.T02:intron 20.0%
!! CTTCTCCAAAAATTAAAATT+GGG + Chr7:90699097-90699116 MsG0780041423.01.T02:intron 20.0%
!! GAATTGAAGAAGAAAAAAAA+TGG + Chr7:90699176-90699195 MsG0780041423.01.T02:intron 20.0%
!! TAAGTTCATAATAAAACTGA+AGG + Chr7:90701276-90701295 MsG0780041423.01.T02:intron 20.0%
!! TGGCTATGTATTTAAATTTA+CGG + Chr7:90701426-90701445 MsG0780041423.01.T02:intron 20.0%
!! TTAGAAAAATGTACTTTCAA+AGG - Chr7:90699762-90699781 None:intergenic 20.0%
!! TTCTAAACTATAATTGTTTC+AGG + Chr7:90699785-90699804 MsG0780041423.01.T02:intron 20.0%
!!! ATAATCAATTTCTTTTGTCA+TGG + Chr7:90699366-90699385 MsG0780041423.01.T02:intron 20.0%
!!! ATCTTCATTTTCTTTATTTC+TGG - Chr7:90697464-90697483 None:intergenic 20.0%
!!! CTTATACCAATTTTAATTGT+AGG + Chr7:90698502-90698521 MsG0780041423.01.T02:CDS 20.0%
!!! TATTTTAAAAACAAATGTGC+AGG + Chr7:90697427-90697446 MsG0780041423.01.T02:intron 20.0%
!!! TGGTTATGTTTTTAGAATAA+AGG + Chr7:90697601-90697620 MsG0780041423.01.T02:intron 20.0%
!!! TTAATTTGGATTGATTTTAC+AGG + Chr7:90696814-90696833 MsG0780041423.01.T02:intron 20.0%
!!! TTTTACTATGTTATCTCAAT+TGG + Chr7:90697215-90697234 MsG0780041423.01.T02:intron 20.0%
!!! TTTTTTTTCTTCTTCAATTC+TGG - Chr7:90699176-90699195 None:intergenic 20.0%
! AAAAAAAAACAACACGTGAT+TGG + Chr7:90701175-90701194 MsG0780041423.01.T02:intron 25.0%
! AAAAAATAATGCCTGATGAA+TGG - Chr7:90698007-90698026 None:intergenic 25.0%
! AAGCATACTATCTTAAAATC+TGG - Chr7:90700917-90700936 None:intergenic 25.0%
! ACACTTAAGTTATAAAGAGA+CGG - Chr7:90701644-90701663 None:intergenic 25.0%
! AGAAAAAATTGTGCTATAAC+TGG - Chr7:90697093-90697112 None:intergenic 25.0%
! ATTGAGTACTATGATATTTC+TGG + Chr7:90696857-90696876 MsG0780041423.01.T02:CDS 25.0%
! ATTGGGATAAACTATCAAAT+TGG + Chr7:90699114-90699133 MsG0780041423.01.T02:intron 25.0%
! CAAATTGCTATAACAAAGAA+AGG - Chr7:90698048-90698067 None:intergenic 25.0%
! GAAGAAGAAATGTTTATGAA+TGG - Chr7:90696352-90696371 None:intergenic 25.0%
! GATAAACTATGAAAATGAGA+AGG + Chr7:90700103-90700122 MsG0780041423.01.T02:CDS 25.0%
! TAAAGCACAAGATATATGAA+AGG - Chr7:90698688-90698707 None:intergenic 25.0%
! TATTAAAATACCTTCTCTTG+TGG + Chr7:90699628-90699647 MsG0780041423.01.T02:intron 25.0%
! TATTCAGATCATACATACAT+GGG + Chr7:90700792-90700811 MsG0780041423.01.T02:CDS 25.0%
! TCAACTCTCAATTTCTTATT+GGG + Chr7:90698155-90698174 MsG0780041423.01.T02:intron 25.0%
! TTAGTTGTTGATCTATACTA+AGG + Chr7:90696999-90697018 MsG0780041423.01.T02:intron 25.0%
! TTATTGGGTGAAATTCATTT+GGG - Chr7:90698244-90698263 None:intergenic 25.0%
! TTCAACTCTCAATTTCTTAT+TGG + Chr7:90698154-90698173 MsG0780041423.01.T02:intron 25.0%
! TTCCTGAAATAACTATTTGA+TGG - Chr7:90698599-90698618 None:intergenic 25.0%
! TTGAATAATGCTTATACCTT+CGG - Chr7:90701585-90701604 None:intergenic 25.0%
!! AAAAACCATTGTTATTGATC+TGG + Chr7:90699258-90699277 MsG0780041423.01.T02:intron 25.0%
!! AACAATTATTGTTTCTTGCA+AGG - Chr7:90698379-90698398 None:intergenic 25.0%
!! CTGCATTAATTTTTCATCTT+TGG + Chr7:90698651-90698670 MsG0780041423.01.T02:intron 25.0%
!! TCTTTGTTATAGCAATTTGT+TGG + Chr7:90698049-90698068 MsG0780041423.01.T02:intron 25.0%
!! TTCCATCAAATAGTTATTTC+AGG + Chr7:90698594-90698613 MsG0780041423.01.T02:intron 25.0%
!! TTTTCTGTATCATAAACACT+TGG + Chr7:90699966-90699985 MsG0780041423.01.T02:intron 25.0%
!!! AATCTCATTTAATTTTGCAC+AGG + Chr7:90700636-90700655 MsG0780041423.01.T02:intron 25.0%
!!! ATTTTGATTTATGAGTAGTG+TGG + Chr7:90696770-90696789 MsG0780041423.01.T02:intron 25.0%
!!! GACAGTTTTGATGTAATTTT+TGG - Chr7:90701065-90701084 None:intergenic 25.0%
!!! GTTGTGTTTGACTTTTAATT+TGG + Chr7:90696800-90696819 MsG0780041423.01.T02:intron 25.0%
!!! TCGAGATTTTGGAATTATAT+CGG + Chr7:90699811-90699830 MsG0780041423.01.T02:CDS 25.0%
!!! TTTATGAATGGATTGAGAAA+CGG - Chr7:90696340-90696359 None:intergenic 25.0%
!!! TTTTAACTGGTAATGAAGAA+AGG - Chr7:90701156-90701175 None:intergenic 25.0%
!!! TTTTCACCTGATTTGTTTTT+AGG + Chr7:90696724-90696743 MsG0780041423.01.T02:intron 25.0%
AACCATCAGATCTATATCAA+CGG - Chr7:90699529-90699548 None:intergenic 30.0%
AACCATTAGATCAAATCTAG+TGG + Chr7:90698871-90698890 MsG0780041423.01.T02:intron 30.0%
AAGATATATGAAAGGCCTTA+CGG - Chr7:90698680-90698699 None:intergenic 30.0%
AAGGAAGTTAAGAAAGAAAC+TGG + Chr7:90696611-90696630 MsG0780041423.01.T02:CDS 30.0%
AATAAGAAGGCTGAAAACTT+CGG + Chr7:90696647-90696666 MsG0780041423.01.T02:CDS 30.0%
ACAGTATTAGAAACAAACAG+AGG - Chr7:90697503-90697522 None:intergenic 30.0%
ACCATTAGATCAAATCTAGT+GGG + Chr7:90698872-90698891 MsG0780041423.01.T02:intron 30.0%
ACGACTCCTACAATTAAAAT+TGG - Chr7:90698511-90698530 None:intergenic 30.0%
AGGTATAAGCATTATTCAAG+TGG + Chr7:90701586-90701605 MsG0780041423.01.T02:CDS 30.0%
ATAACAAAGAAAGGAAAGCA+TGG - Chr7:90698039-90698058 None:intergenic 30.0%
ATGCATGTTCAAAATTGGAA+CGG + Chr7:90699436-90699455 MsG0780041423.01.T02:intron 30.0%
ATGTGATTGTTCAACAAGTT+TGG + Chr7:90697581-90697600 MsG0780041423.01.T02:intron 30.0%
CAGTATTAGAAACAAACAGA+GGG - Chr7:90697502-90697521 None:intergenic 30.0%
CATTCCACCTTTCAATTTAA+CGG + Chr7:90696557-90696576 MsG0780041423.01.T02:intron 30.0%
CTTATTGGGTGAAATTCATT+TGG - Chr7:90698245-90698264 None:intergenic 30.0%
CTTTCAATTGAATTGTACCT+CGG - Chr7:90696684-90696703 None:intergenic 30.0%
GAAATAGACACTACATAAAG+TGG - Chr7:90698206-90698225 None:intergenic 30.0%
GAAATGCCTAAAAAAGAACT+TGG - Chr7:90700941-90700960 None:intergenic 30.0%
GTATTCAGATCATACATACA+TGG + Chr7:90700791-90700810 MsG0780041423.01.T02:CDS 30.0%
GTTTGACCTAAAAACAAATC+AGG - Chr7:90696733-90696752 None:intergenic 30.0%
TAAATAGTCACAGCAAAATC+AGG - Chr7:90697746-90697765 None:intergenic 30.0%
TAAATCAGATTCTCCAGATT+TGG - Chr7:90697843-90697862 None:intergenic 30.0%
TACATAACAGTTTCACTAGT+TGG - Chr7:90697887-90697906 None:intergenic 30.0%
TAGTGTCTATTTCGTGATTA+TGG + Chr7:90698213-90698232 MsG0780041423.01.T02:intron 30.0%
TATAAGCATTATTCAAGTGG+AGG + Chr7:90701589-90701608 MsG0780041423.01.T02:CDS 30.0%
TCATGCACATTTACTTCATA+TGG + Chr7:90698452-90698471 MsG0780041423.01.T02:intron 30.0%
TGAATAATGCTTATACCTTC+GGG - Chr7:90701584-90701603 None:intergenic 30.0%
TGAGAAAGCAAACTATGAAT+GGG + Chr7:90699207-90699226 MsG0780041423.01.T02:intron 30.0%
TGGAATAGGAGAAATCAATT+TGG - Chr7:90698992-90699011 None:intergenic 30.0%
TGGACTAATCGGATTTATAT+TGG + Chr7:90701195-90701214 MsG0780041423.01.T02:intron 30.0%
TGTTGATCTATACTAAGGTT+CGG + Chr7:90697004-90697023 MsG0780041423.01.T02:intron 30.0%
TTACTACTCTAAGTGGATAA+GGG + Chr7:90697910-90697929 MsG0780041423.01.T02:CDS 30.0%
TTCTTGGTTTATAATGCTTC+AGG + Chr7:90701472-90701491 MsG0780041423.01.T02:intron 30.0%
TTGAGAAAGCAAACTATGAA+TGG + Chr7:90699206-90699225 MsG0780041423.01.T02:intron 30.0%
TTTCTGCAAATTAGTGCAAT+AGG - Chr7:90700564-90700583 None:intergenic 30.0%
TTTCTTCTTCAATTCTGGAT+CGG - Chr7:90699171-90699190 None:intergenic 30.0%
! AGAGGACTTTTTAAATGAGA+GGG + Chr7:90698831-90698850 MsG0780041423.01.T02:intron 30.0%
! ATCTGGAGTTGAAGAAATAA+GGG + Chr7:90699275-90699294 MsG0780041423.01.T02:intron 30.0%
! ATTTTACAGGTTGTTGTGAA+TGG + Chr7:90696827-90696846 MsG0780041423.01.T02:intron 30.0%
! GTTAAGAAAGAAACTGGTTT+AGG + Chr7:90696617-90696636 MsG0780041423.01.T02:CDS 30.0%
! TGATGATGCATGTTCAAAAT+TGG + Chr7:90699431-90699450 MsG0780041423.01.T02:intron 30.0%
! TGCTTATTTGCTAAATCCTT+GGG - Chr7:90700526-90700545 None:intergenic 30.0%
! TGGTAATGATGATTTGATTG+AGG + Chr7:90700699-90700718 MsG0780041423.01.T02:CDS 30.0%
! TTGTCTTTCTAAAAAGTCCT+TGG + Chr7:90699058-90699077 MsG0780041423.01.T02:intron 30.0%
! TTTAGGTTTGACCAATAAGA+AGG + Chr7:90696634-90696653 MsG0780041423.01.T02:CDS 30.0%
! TTTTACAGGTTGTTGTGAAT+GGG + Chr7:90696828-90696847 MsG0780041423.01.T02:intron 30.0%
! TTTTCTTGGTAAACTGTTCT+TGG + Chr7:90701456-90701475 MsG0780041423.01.T02:intron 30.0%
! TTTTGATGTAAAATCTTCCC+AGG + Chr7:90700001-90700020 MsG0780041423.01.T02:intron 30.0%
!! AAAACCAATTTTCGAGCTTA+CGG + Chr7:90697033-90697052 MsG0780041423.01.T02:intron 30.0%
!! ATTTTAATACGAGTAGTGCT+AGG + Chr7:90698108-90698127 MsG0780041423.01.T02:intron 30.0%
!! ATTTTGATATGTCTGCTCAT+TGG + Chr7:90701406-90701425 MsG0780041423.01.T02:intron 30.0%
!! GTTTGTTTCTAATACTGTTC+TGG + Chr7:90697505-90697524 MsG0780041423.01.T02:CDS 30.0%
!! TAAGAAGCGTTTGAGTTTAT+AGG + Chr7:90697166-90697185 MsG0780041423.01.T02:intron 30.0%
!! TTCTAATACTGTTCTGGAAA+AGG + Chr7:90697511-90697530 MsG0780041423.01.T02:CDS 30.0%
!! TTGTTGTGTTTTGTTGTCAT+CGG - Chr7:90696442-90696461 None:intergenic 30.0%
!!! ACTGGTCTATTTTAGTCATA+AGG - Chr7:90697075-90697094 None:intergenic 30.0%
!!! CTGGTCTATTTTAGTCATAA+GGG - Chr7:90697074-90697093 None:intergenic 30.0%
!!! TGGTTGTTTTGGTTGTTTTT+GGG - Chr7:90696481-90696500 None:intergenic 30.0%
!!! TTGGTTGTTTTGGTTGTTTT+TGG - Chr7:90696482-90696501 None:intergenic 30.0%
AAAAGATGATCTTAGCTCCT+TGG + Chr7:90700842-90700861 MsG0780041423.01.T02:CDS 35.0%
AAAGGGTTTACTTACCAACT+GGG - Chr7:90701091-90701110 None:intergenic 35.0%
AACCGTTGATATAGATCTGA+TGG + Chr7:90699524-90699543 MsG0780041423.01.T02:intron 35.0%
AAGGATAGAAAATCTGTGTG+CGG - Chr7:90699743-90699762 None:intergenic 35.0%
AATGCATGCTAATGAAGCAA+AGG - Chr7:90699690-90699709 None:intergenic 35.0%
ACAGGCGTTTAGAAATAGAA+AGG - Chr7:90701109-90701128 None:intergenic 35.0%
ACCCACTAGATTTGATCTAA+TGG - Chr7:90698876-90698895 None:intergenic 35.0%
ACTTGTTTATAGTCCATCTC+AGG + Chr7:90698476-90698495 MsG0780041423.01.T02:intron 35.0%
AGATGTCAAAGCAAAGACAA+AGG + Chr7:90701505-90701524 MsG0780041423.01.T02:CDS 35.0%
ATCAGATCTATATCAACGGT+TGG - Chr7:90699525-90699544 None:intergenic 35.0%
ATGCATGCTAATGAAGCAAA+GGG - Chr7:90699689-90699708 None:intergenic 35.0%
ATGTCATTCAAAGTGCAAGA+TGG - Chr7:90701257-90701276 None:intergenic 35.0%
ATTTAAATGACTCTCACCTC+TGG - Chr7:90697563-90697582 None:intergenic 35.0%
CAACAACATATTCACAGTTG+CGG - Chr7:90700398-90700417 None:intergenic 35.0%
CAACTCCAGATCAATAACAA+TGG - Chr7:90699266-90699285 None:intergenic 35.0%
CAAGGATTTAGCAAATAAGC+AGG + Chr7:90700525-90700544 MsG0780041423.01.T02:CDS 35.0%
CAGGCGTTTAGAAATAGAAA+GGG - Chr7:90701108-90701127 None:intergenic 35.0%
CATCACCAGATGATTCATAA+AGG - Chr7:90698327-90698346 None:intergenic 35.0%
CGTTAAATTGAAAGGTGGAA+TGG - Chr7:90696559-90696578 None:intergenic 35.0%
CTTAAGTTATAAAGAGACGG+AGG - Chr7:90701641-90701660 None:intergenic 35.0%
CTTACTACTCTAAGTGGATA+AGG + Chr7:90697909-90697928 MsG0780041423.01.T02:CDS 35.0%
CTTATCCACTTAGAGTAGTA+AGG - Chr7:90697911-90697930 None:intergenic 35.0%
CTTCTTCTTCAATTCCTCAT+CGG + Chr7:90696365-90696384 MsG0780041423.01.T02:five_prime_UTR 35.0%
CTTGTTTATAGTCCATCTCA+GGG + Chr7:90698477-90698496 MsG0780041423.01.T02:intron 35.0%
GAATAATGCTTATACCTTCG+GGG - Chr7:90701583-90701602 None:intergenic 35.0%
GATGTCAAAGCAAAGACAAA+GGG + Chr7:90701506-90701525 MsG0780041423.01.T02:CDS 35.0%
GCAGAATTCACACTCTTATT+GGG - Chr7:90698259-90698278 None:intergenic 35.0%
GTGAAATAACCTGATTGTTG+TGG - Chr7:90696507-90696526 None:intergenic 35.0%
TAACATTCTGTTTCAGGATC+AGG + Chr7:90696388-90696407 MsG0780041423.01.T02:five_prime_UTR 35.0%
TAAGAACGTGAAGGAAGATT+GGG - Chr7:90696533-90696552 None:intergenic 35.0%
TACAAAGATGCTGATACTCA+AGG + Chr7:90700355-90700374 MsG0780041423.01.T02:CDS 35.0%
TACTACTCTAAGTGGATAAG+GGG + Chr7:90697911-90697930 MsG0780041423.01.T02:CDS 35.0%
TATAGGACATATCAAGTGAG+AGG - Chr7:90699588-90699607 None:intergenic 35.0%
TATTCTCAGTGGGAAATGAA+AGG + Chr7:90700475-90700494 MsG0780041423.01.T02:CDS 35.0%
TGAGTATCAGCATCTTTGTA+GGG - Chr7:90700355-90700374 None:intergenic 35.0%
TGATACAGAAAACTTGACGA+TGG - Chr7:90699958-90699977 None:intergenic 35.0%
TGCAGAATTCACACTCTTAT+TGG - Chr7:90698260-90698279 None:intergenic 35.0%
TGTATCCTTACTACTCTAAG+TGG + Chr7:90697903-90697922 MsG0780041423.01.T02:CDS 35.0%
TTCTTCTTCAATTCTGGATC+GGG - Chr7:90699170-90699189 None:intergenic 35.0%
TTGAGTATCAGCATCTTTGT+AGG - Chr7:90700356-90700375 None:intergenic 35.0%
TTGGTTTATAATGCTTCAGG+AGG + Chr7:90701475-90701494 MsG0780041423.01.T02:intron 35.0%
TTTACAGGTTGTTGTGAATG+GGG + Chr7:90696829-90696848 MsG0780041423.01.T02:intron 35.0%
! ACTTGAACTGAAGCTACTTT+AGG - Chr7:90700316-90700335 None:intergenic 35.0%
! AGAAAGGAAAGCATGGTTAA+CGG - Chr7:90698032-90698051 None:intergenic 35.0%
! AGTGTTTGGAATAAATGCCT+GGG - Chr7:90700021-90700040 None:intergenic 35.0%
! ATCTATACTAAGGTTCGGTT+TGG + Chr7:90697009-90697028 MsG0780041423.01.T02:intron 35.0%
! CACCACCTACAAAAAAGTTT+TGG - Chr7:90696583-90696602 None:intergenic 35.0%
! CTGCTTATTTGCTAAATCCT+TGG - Chr7:90700527-90700546 None:intergenic 35.0%
! GAAGTTTTCAGCCTTCTTAT+TGG - Chr7:90696648-90696667 None:intergenic 35.0%
! GAGAGGACTTTTTAAATGAG+AGG + Chr7:90698830-90698849 MsG0780041423.01.T02:intron 35.0%
! GATCTGGAGTTGAAGAAATA+AGG + Chr7:90699274-90699293 MsG0780041423.01.T02:intron 35.0%
! GTTCCTCTAAGGATTGAAAT+CGG + Chr7:90700499-90700518 MsG0780041423.01.T02:CDS 35.0%
! TAACCTGATTGTTGTGGTTT+TGG - Chr7:90696501-90696520 None:intergenic 35.0%
! TGGTGATGATTCTAGTGAAT+TGG + Chr7:90698339-90698358 MsG0780041423.01.T02:intron 35.0%
! TTCCTCTAAGGATTGAAATC+GGG + Chr7:90700500-90700519 MsG0780041423.01.T02:CDS 35.0%
! TTTTTAAATGAGAGGGTGAG+AGG + Chr7:90698838-90698857 MsG0780041423.01.T02:intron 35.0%
!! AAATGAAAGGTGTTCCTCTA+AGG + Chr7:90700488-90700507 MsG0780041423.01.T02:CDS 35.0%
!! AGAGGAGTATTTATTGTGAG+AGG - Chr7:90699570-90699589 None:intergenic 35.0%
!! GAGGAGTATTTATTGTGAGA+GGG - Chr7:90699569-90699588 None:intergenic 35.0%
!! GTTTTGGCCGTTAAATTGAA+AGG - Chr7:90696567-90696586 None:intergenic 35.0%
!! TACCTTTGAAGCTTAATCAG+TGG + Chr7:90697945-90697964 MsG0780041423.01.T02:CDS 35.0%
!! TTATAGCAATTTGTTGGCTG+TGG + Chr7:90698055-90698074 MsG0780041423.01.T02:intron 35.0%
!!! AACGGCCAAAACTTTTTTGT+AGG + Chr7:90696575-90696594 MsG0780041423.01.T02:intron 35.0%
!!! CAAAACTTTTTTGTAGGTGG+TGG + Chr7:90696581-90696600 MsG0780041423.01.T02:intron 35.0%
!!! GGTTGTTTTGGTTGTTTTTG+GGG - Chr7:90696480-90696499 None:intergenic 35.0%
!!! TGCTTGCCAAGTTCTTTTTT+AGG + Chr7:90700932-90700951 MsG0780041423.01.T02:intron 35.0%
!!! TGTTGTGGTTTTGGTTGTTT+TGG - Chr7:90696492-90696511 None:intergenic 35.0%
!!! TTGCGCTTTTTCAACAGATT+GGG + Chr7:90700245-90700264 MsG0780041423.01.T02:intron 35.0%
!!! TTTACGGTTTGGTGTTTTCT+TGG + Chr7:90701442-90701461 MsG0780041423.01.T02:intron 35.0%
!!! TTTGCGCTTTTTCAACAGAT+TGG + Chr7:90700244-90700263 MsG0780041423.01.T02:intron 35.0%
ACCTTGGTCAATGGCTATTT+GGG + Chr7:90696895-90696914 MsG0780041423.01.T02:CDS 40.0%
ACGTAACTGAGAGAGAAGAA+AGG - Chr7:90698944-90698963 None:intergenic 40.0%
ACTTTACACTACCAGTGTTG+AGG + Chr7:90699908-90699927 MsG0780041423.01.T02:CDS 40.0%
AGAGAGAGAATCTCCTCTTA+CGG + Chr7:90696250-90696269 MsG0780041423.01.T02:five_prime_UTR 40.0%
AGAGAGTGACACGATTATAG+AGG - Chr7:90700982-90701001 None:intergenic 40.0%
AGGATAGAAAATCTGTGTGC+GGG - Chr7:90699742-90699761 None:intergenic 40.0%
AGTGGTGCAATGTTGTTAGA+TGG + Chr7:90697963-90697982 MsG0780041423.01.T02:CDS 40.0%
ATAATGCCTGATGAATGGTG+TGG - Chr7:90698002-90698021 None:intergenic 40.0%
ATCCATGTCTGACTAAGCTT+AGG - Chr7:90697351-90697370 None:intergenic 40.0%
ATTTATTGTGAGAGGGTGAG+AGG - Chr7:90699562-90699581 None:intergenic 40.0%
CAACACGTGATTGGACTAAT+CGG + Chr7:90701184-90701203 MsG0780041423.01.T02:intron 40.0%
CAACCAAAACCACAACAATC+AGG + Chr7:90696495-90696514 MsG0780041423.01.T02:CDS 40.0%
CAGGCATTTATTCCAAACAC+TGG + Chr7:90700020-90700039 MsG0780041423.01.T02:intron 40.0%
CATCGGTAACATTCTGTTTC+AGG + Chr7:90696382-90696401 MsG0780041423.01.T02:five_prime_UTR 40.0%
CATTCAAAGTGCAAGATGGA+AGG - Chr7:90701253-90701272 None:intergenic 40.0%
CGCAACTGTGAATATGTTGT+TGG + Chr7:90700396-90700415 MsG0780041423.01.T02:CDS 40.0%
CGCTTCCTTTATGAATCATC+TGG + Chr7:90698319-90698338 MsG0780041423.01.T02:intron 40.0%
CGTGGAGAATATATCAGGAA+GGG + Chr7:90699459-90699478 MsG0780041423.01.T02:intron 40.0%
CTAAGAACGTGAAGGAAGAT+TGG - Chr7:90696534-90696553 None:intergenic 40.0%
CTAGTTGGACGAATAGCAAT+AGG - Chr7:90697872-90697891 None:intergenic 40.0%
CTTATTGGGTGAAATCACGT+GGG + Chr7:90698169-90698188 MsG0780041423.01.T02:intron 40.0%
GAAACAGAATGTTACCGATG+AGG - Chr7:90696382-90696401 None:intergenic 40.0%
GAAAGGGTTTACTTACCAAC+TGG - Chr7:90701092-90701111 None:intergenic 40.0%
GAATGGTACTAAGAACGTGA+AGG - Chr7:90696542-90696561 None:intergenic 40.0%
GCTTACAGTTCGAGTACTAT+AGG - Chr7:90700162-90700181 None:intergenic 40.0%
GTAGTGTGATTCAAAAGCCA+AGG - Chr7:90699078-90699097 None:intergenic 40.0%
GTGAATATGTTGTTGGAAGC+AGG + Chr7:90700403-90700422 MsG0780041423.01.T02:CDS 40.0%
GTGGTGCAATGTTGTTAGAT+GGG + Chr7:90697964-90697983 MsG0780041423.01.T02:CDS 40.0%
GTTGCTATATTCTCAGACCT+TGG + Chr7:90696879-90696898 MsG0780041423.01.T02:CDS 40.0%
GTTTATAATGCTTCAGGAGG+TGG + Chr7:90701478-90701497 MsG0780041423.01.T02:intron 40.0%
TAATGCCTGATGAATGGTGT+GGG - Chr7:90698001-90698020 None:intergenic 40.0%
TATTCTCAGACCTTGGTCAA+TGG + Chr7:90696886-90696905 MsG0780041423.01.T02:CDS 40.0%
TCTTACCGAAAACCCATTCA+TGG + Chr7:90699141-90699160 MsG0780041423.01.T02:intron 40.0%
TCTTATTGGGTGAAATCACG+TGG + Chr7:90698168-90698187 MsG0780041423.01.T02:intron 40.0%
TGCATGCTAATGAAGCAAAG+GGG - Chr7:90699688-90699707 None:intergenic 40.0%
TTCCTCCTTTGTTGCAAAAG+CGG - Chr7:90698559-90698578 None:intergenic 40.0%
TTGGCCGTTAAATTGAAAGG+TGG - Chr7:90696564-90696583 None:intergenic 40.0%
TTGGTATAAGTACCCTGAGA+TGG - Chr7:90698492-90698511 None:intergenic 40.0%
TTTATTCCAAACACTGGTCG+TGG + Chr7:90700026-90700045 MsG0780041423.01.T02:CDS 40.0%
TTTCATCTTTGGTCTCCGTA+AGG + Chr7:90698662-90698681 MsG0780041423.01.T02:intron 40.0%
! AAGGAAGCGTGCAGAATTTA+AGG - Chr7:90698308-90698327 None:intergenic 40.0%
! ATGGTTCATGGTGATGACAA+GGG + Chr7:90700277-90700296 MsG0780041423.01.T02:CDS 40.0%
! CACCACTGATTAAGCTTCAA+AGG - Chr7:90697950-90697969 None:intergenic 40.0%
! CAGTGTTTGGAATAAATGCC+TGG - Chr7:90700022-90700041 None:intergenic 40.0%
! CTTTTCTTACCCTTTACGAC+AGG - Chr7:90699864-90699883 None:intergenic 40.0%
! TATGAATGGGTTTCGACTTG+TGG + Chr7:90699220-90699239 MsG0780041423.01.T02:intron 40.0%
! TGAACTGAAGCTACTTTAGG+TGG - Chr7:90700313-90700332 None:intergenic 40.0%
! TTTTCAACAGATTGGGGTGA+TGG + Chr7:90700252-90700271 MsG0780041423.01.T02:intron 40.0%
!! AAATGGCTTTGTGCTGGAAT+AGG - Chr7:90699006-90699025 None:intergenic 40.0%
!! ACCTTGTTGAGTTGGAAAGA+AGG - Chr7:90696313-90696332 None:intergenic 40.0%
!! GAGAGAGCATTTCAAATGAG+AGG + Chr7:90698813-90698832 MsG0780041423.01.T02:intron 40.0%
!! GCGTGTCTATGAAGAGTATT+TGG + Chr7:90699833-90699852 MsG0780041423.01.T02:CDS 40.0%
!! TACTGTTCTGGAAAAGGAGA+AGG + Chr7:90697517-90697536 MsG0780041423.01.T02:CDS 40.0%
!! TAGTGTTGATGCAGCGAAAA+TGG - Chr7:90699023-90699042 None:intergenic 40.0%
!! TGGATGGAAGTATTCTCAGT+GGG + Chr7:90700465-90700484 MsG0780041423.01.T02:CDS 40.0%
!! TGTCTCATTTGAGTTGTGCA+TGG + Chr7:90701661-90701680 MsG0780041423.01.T02:CDS 40.0%
!! TGTCTGTTGGTTTCTGTATC+AGG + Chr7:90701130-90701149 MsG0780041423.01.T02:intron 40.0%
!!! GGCCAAAACTTTTTTGTAGG+TGG + Chr7:90696578-90696597 MsG0780041423.01.T02:intron 40.0%
!!! GTTTCAGGTTCTCGAGATTT+TGG + Chr7:90699800-90699819 MsG0780041423.01.T02:intron 40.0%
!!! TGCGCTTTTTCAACAGATTG+GGG + Chr7:90700246-90700265 MsG0780041423.01.T02:intron 40.0%
!!! TTGTTTTTGGGGTTTTGCAG+CGG - Chr7:90696469-90696488 None:intergenic 40.0%
AAAGGAGAAGGACCATATCG+AGG + Chr7:90697529-90697548 MsG0780041423.01.T02:CDS 45.0%
AAAGGAGGAAGCAGATACAG+AGG + Chr7:90698569-90698588 MsG0780041423.01.T02:CDS 45.0%
AAATGTCTTGCCCTTTACCC+AGG + Chr7:90697805-90697824 MsG0780041423.01.T02:intron 45.0%
AACGGCGTGGAGAATATATC+AGG + Chr7:90699454-90699473 MsG0780041423.01.T02:intron 45.0%
AAGGAGAAGGACCATATCGA+GGG + Chr7:90697530-90697549 MsG0780041423.01.T02:CDS 45.0%
AATGGTCTGGCAGAACTCAT+GGG + Chr7:90700136-90700155 MsG0780041423.01.T02:CDS 45.0%
ACAGAAACCAACAGACAGAC+AGG - Chr7:90701127-90701146 None:intergenic 45.0%
AGCCTAAGCTTAGTCAGACA+TGG + Chr7:90697346-90697365 MsG0780041423.01.T02:intron 45.0%
AGGCTGAAAACTTCGGAGAA+TGG + Chr7:90696654-90696673 MsG0780041423.01.T02:CDS 45.0%
AGGGGCAACTTCTCATTGTT+TGG + Chr7:90700055-90700074 MsG0780041423.01.T02:CDS 45.0%
AGTGAGCTTGAGAAGTTTGC+TGG + Chr7:90699882-90699901 MsG0780041423.01.T02:CDS 45.0%
ATAGAAAATCTGTGTGCGGG+TGG - Chr7:90699739-90699758 None:intergenic 45.0%
ATGCTGCTGATAGAAGGACT+AGG - Chr7:90697688-90697707 None:intergenic 45.0%
CACTACACAACCACAAGAGA+AGG - Chr7:90699641-90699660 None:intergenic 45.0%
CACTGAGAATACTTCCATCC+AGG - Chr7:90700466-90700485 None:intergenic 45.0%
CATAGCATGCTGCTGATAGA+AGG - Chr7:90697694-90697713 None:intergenic 45.0%
CATATTCACAGTTGCGGTAC+AGG - Chr7:90700392-90700411 None:intergenic 45.0%
CGTGAGTTTCTTTGGCAAGA+AGG + Chr7:90698528-90698547 MsG0780041423.01.T02:CDS 45.0%
GACCTTGGTCAATGGCTATT+TGG + Chr7:90696894-90696913 MsG0780041423.01.T02:CDS 45.0%
GAGAGAGAAGAAAGGAAGAG+AGG - Chr7:90698936-90698955 None:intergenic 45.0%
GCCTTCTTTCCAACTCAACA+AGG + Chr7:90696309-90696328 MsG0780041423.01.T02:five_prime_UTR 45.0%
GCGTGGAGAATATATCAGGA+AGG + Chr7:90699458-90699477 MsG0780041423.01.T02:intron 45.0%
GGGGCAACTTCTCATTGTTT+GGG + Chr7:90700056-90700075 MsG0780041423.01.T02:CDS 45.0%
GGTTTACTTACCAACTGGGA+AGG - Chr7:90701087-90701106 None:intergenic 45.0%
GTAGGAGTCGTGAGTTTCTT+TGG + Chr7:90698520-90698539 MsG0780041423.01.T02:CDS 45.0%
TCAAAACTGTCCTTCCCAGT+TGG + Chr7:90701074-90701093 MsG0780041423.01.T02:intron 45.0%
TCCCAAATAGCCATTGACCA+AGG - Chr7:90696899-90696918 None:intergenic 45.0%
TGAGAAGGGAGAGAAAGCAA+TGG + Chr7:90700118-90700137 MsG0780041423.01.T02:CDS 45.0%
TGCACCGTAAGCTCGAAAAT+TGG - Chr7:90697040-90697059 None:intergenic 45.0%
TGTTCAAAATTGGAACGGCG+TGG + Chr7:90699441-90699460 MsG0780041423.01.T02:intron 45.0%
TTGGCAGTTCCTGTCGTAAA+GGG + Chr7:90699852-90699871 MsG0780041423.01.T02:CDS 45.0%
TTTCTTGCAAGGCAGCTTCA+CGG - Chr7:90698368-90698387 None:intergenic 45.0%
TTTGGCAGTTCCTGTCGTAA+AGG + Chr7:90699851-90699870 MsG0780041423.01.T02:CDS 45.0%
! ATCGTGTCACTCTCTGATTG+AGG + Chr7:90700987-90701006 MsG0780041423.01.T02:intron 45.0%
! GAAAGGAAGAGAGGTGCATA+CGG - Chr7:90698927-90698946 None:intergenic 45.0%
! GATGGTTCATGGTGATGACA+AGG + Chr7:90700276-90700295 MsG0780041423.01.T02:CDS 45.0%
! TCATGGTGATGACAAGGGAT+TGG + Chr7:90700282-90700301 MsG0780041423.01.T02:CDS 45.0%
!! ACACACCGCTTTTGCAACAA+AGG + Chr7:90698551-90698570 MsG0780041423.01.T02:CDS 45.0%
!! ACGGTGTTACCTTGTTGAGT+TGG - Chr7:90696321-90696340 None:intergenic 45.0%
!! CTGGATGGAAGTATTCTCAG+TGG + Chr7:90700464-90700483 MsG0780041423.01.T02:CDS 45.0%
!! GGAAGCCATGAATGGGTTTT+CGG - Chr7:90699149-90699168 None:intergenic 45.0%
!! TGTAGGTGGTGGAAAGAAGA+AGG + Chr7:90696592-90696611 MsG0780041423.01.T02:intron 45.0%
!! AATAAATAAATAAATACATT+TGG - Chr7:90696973-90696992 None:intergenic 5.0%
!! ATAAATAAATAAATACATTT+GGG - Chr7:90696972-90696991 None:intergenic 5.0%
!! ATAATTAGATATAAAATATT+TGG - Chr7:90698407-90698426 None:intergenic 5.0%
AACACTGGTCGTGGCATACA+AGG + Chr7:90700035-90700054 MsG0780041423.01.T02:CDS 50.0%
AACCAGTCAGCATGACATGC+AGG - Chr7:90697637-90697656 None:intergenic 50.0%
AAGGATTGAAATCGGGCCCA+AGG + Chr7:90700507-90700526 MsG0780041423.01.T02:CDS 50.0%
ACACTGGTCGTGGCATACAA+GGG + Chr7:90700036-90700055 MsG0780041423.01.T02:CDS 50.0%
ACCAGTCAGCATGACATGCA+GGG - Chr7:90697636-90697655 None:intergenic 50.0%
ACCCAAGCAACCTGGGTAAA+GGG - Chr7:90697818-90697837 None:intergenic 50.0%
AGAGAATCTCCTCTTACGGC+CGG + Chr7:90696254-90696273 MsG0780041423.01.T02:five_prime_UTR 50.0%
AGCGGAGCAAAGATCGACAT+TGG + Chr7:90700679-90700698 MsG0780041423.01.T02:CDS 50.0%
AGGGAGAGAAAGCAATGGTC+TGG + Chr7:90700123-90700142 MsG0780041423.01.T02:CDS 50.0%
ATTTGGTCACCCAAGCAACC+TGG - Chr7:90697826-90697845 None:intergenic 50.0%
CAATGGTCTGGCAGAACTCA+TGG + Chr7:90700135-90700154 MsG0780041423.01.T02:CDS 50.0%
CTAAACGCCTGTCTGTCTGT+TGG + Chr7:90701117-90701136 MsG0780041423.01.T02:intron 50.0%
CTATCAGCAGCATGCTATGC+TGG + Chr7:90697695-90697714 MsG0780041423.01.T02:intron 50.0%
CTCGTCATCCTTCACAATGG+CGG + Chr7:90696413-90696432 MsG0780041423.01.T02:exon 50.0%
CTGGAGCAAAACCCTCGATA+TGG - Chr7:90697544-90697563 None:intergenic 50.0%
CTTATACCTTCGGGGAGTTC+TGG - Chr7:90701575-90701594 None:intergenic 50.0%
CTTCGGAGAATGGTATTCCG+AGG + Chr7:90696664-90696683 MsG0780041423.01.T02:CDS 50.0%
GAGACAACTACTCTCCTGGA+TGG + Chr7:90700449-90700468 MsG0780041423.01.T02:CDS 50.0%
GCAAAGACAAAGGGTGAGAC+AGG + Chr7:90701515-90701534 MsG0780041423.01.T02:CDS 50.0%
GCAATCCCACACCATTCATC+AGG + Chr7:90697993-90698012 MsG0780041423.01.T02:CDS 50.0%
GGAAAGAAGGCGAGAGAGAA+TGG - Chr7:90696300-90696319 None:intergenic 50.0%
GGCCCGATTTCAATCCTTAG+AGG - Chr7:90700505-90700524 None:intergenic 50.0%
GTGCTCGTCATCCTTCACAA+TGG + Chr7:90696410-90696429 MsG0780041423.01.T02:exon 50.0%
GTTGCTTGGGTGACCAAATC+TGG + Chr7:90697827-90697846 MsG0780041423.01.T02:CDS 50.0%
TCAGACACACACCTCAACAC+TGG - Chr7:90699922-90699941 None:intergenic 50.0%
TCAGCATCTTTGTAGGGCAC+AGG - Chr7:90700349-90700368 None:intergenic 50.0%
TCCAGGAGAGTAGTTGTCTC+TGG - Chr7:90700449-90700468 None:intergenic 50.0%
TCGTCATCCTTCACAATGGC+GGG + Chr7:90696414-90696433 MsG0780041423.01.T02:exon 50.0%
TGGATCGGGAAGCCATGAAT+GGG - Chr7:90699156-90699175 None:intergenic 50.0%
TGTATGCCACGACCAGTGTT+TGG - Chr7:90700035-90700054 None:intergenic 50.0%
TTTGGTCACCCAAGCAACCT+GGG - Chr7:90697825-90697844 None:intergenic 50.0%
! ACAGATTGGGGTGATGGTGA+TGG + Chr7:90700258-90700277 MsG0780041423.01.T02:intron 50.0%
! GGGAGTTCTGGCTGATCAAA+GGG - Chr7:90701563-90701582 None:intergenic 50.0%
! TATCGAGGGTTTTGCTCCAG+AGG + Chr7:90697544-90697563 MsG0780041423.01.T02:CDS 50.0%
!! CACCGCTTTTGCAACAAAGG+AGG + Chr7:90698554-90698573 MsG0780041423.01.T02:CDS 50.0%
!! CAGCGAAAATGGCTTTGTGC+TGG - Chr7:90699012-90699031 None:intergenic 50.0%
!! GAGCTTGAGAAGTTTGCTGG+TGG + Chr7:90699885-90699904 MsG0780041423.01.T02:CDS 50.0%
AATGGAGCGTGCAAGAGCGA+TGG - Chr7:90696282-90696301 None:intergenic 55.0%
CACCCAAGCAACCTGGGTAA+AGG - Chr7:90697819-90697838 None:intergenic 55.0%
CACTGGTCGTGGCATACAAG+GGG + Chr7:90700037-90700056 MsG0780041423.01.T02:CDS 55.0%
CATACCTCCTCGTCACACCA+AGG - Chr7:90700862-90700881 None:intergenic 55.0%
CGCTATCACGACGAACAGCA+CGG - Chr7:90700663-90700682 None:intergenic 55.0%
CGTCATCCTTCACAATGGCG+GGG + Chr7:90696415-90696434 MsG0780041423.01.T02:exon 55.0%
CTGGATCGGGAAGCCATGAA+TGG - Chr7:90699157-90699176 None:intergenic 55.0%
GCCAGAGACAACTACTCTCC+TGG + Chr7:90700445-90700464 MsG0780041423.01.T02:CDS 55.0%
GCCCTTTACCCAGGTTGCTT+GGG + Chr7:90697814-90697833 MsG0780041423.01.T02:intron 55.0%
TCCCTGCATGTCATGCTGAC+TGG + Chr7:90697632-90697651 MsG0780041423.01.T02:intron 55.0%
TGCCCTTTACCCAGGTTGCT+TGG + Chr7:90697813-90697832 MsG0780041423.01.T02:intron 55.0%
! CGTGCTGTTCGTCGTGATAG+CGG + Chr7:90700661-90700680 MsG0780041423.01.T02:CDS 55.0%
! CTTAGCTCCTTGGTGTGACG+AGG + Chr7:90700852-90700871 MsG0780041423.01.T02:CDS 55.0%
! GGGGAGTTCTGGCTGATCAA+AGG - Chr7:90701564-90701583 None:intergenic 55.0%
!! GGGGTGATGGTGATGGTTCA+TGG + Chr7:90700265-90700284 MsG0780041423.01.T02:CDS 55.0%
ATCGGTCCCCGCCATTGTGA+AGG - Chr7:90696424-90696443 None:intergenic 60.0%
GATCAGCCAGAACTCCCCGA+AGG + Chr7:90701566-90701585 MsG0780041423.01.T02:CDS 60.0%
! AGCTCCTTGGTGTGACGAGG+AGG + Chr7:90700855-90700874 MsG0780041423.01.T02:CDS 60.0%
GCGTGCAAGAGCGATGGTGC+CGG - Chr7:90696276-90696295 None:intergenic 65.0%
!! GCGATGGTGCCGGCCGTAAG+AGG - Chr7:90696266-90696285 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 90696241 90701706 90696241 ID=MsG0780041423.01;Name=MsG0780041423.01
Chr7 mRNA 90696241 90701706 90696241 ID=MsG0780041423.01.T01;Parent=MsG0780041423.01;Name=MsG0780041423.01.T01;_AED=0.39;_eAED=0.43;_QI=115|0.90|0.75|1|0.81|0.66|12|0|558
Chr7 exon 90696241 90696330 90696241 ID=MsG0780041423.01.T01:exon:20856;Parent=MsG0780041423.01.T01
Chr7 exon 90696404 90696516 90696404 ID=MsG0780041423.01.T01:exon:20857;Parent=MsG0780041423.01.T01
Chr7 five_prime_UTR 90696241 90696330 90696241 ID=MsG0780041423.01.T01:five_prime_utr;Parent=MsG0780041423.01.T01
Chr7 five_prime_UTR 90696404 90696428 90696404 ID=MsG0780041423.01.T01:five_prime_utr;Parent=MsG0780041423.01.T01
Chr7 CDS 90696429 90696516 90696429 ID=MsG0780041423.01.T01:cds;Parent=MsG0780041423.01.T01
Chr7 CDS 90696597 90696685 90696597 ID=MsG0780041423.01.T01:cds;Parent=MsG0780041423.01.T01
Chr7 CDS 90696836 90696928 90696836 ID=MsG0780041423.01.T01:cds;Parent=MsG0780041423.01.T01
Chr7 CDS 90697449 90697565 90697449 ID=MsG0780041423.01.T01:cds;Parent=MsG0780041423.01.T01
Chr7 CDS 90697827 90698030 90697827 ID=MsG0780041423.01.T01:cds;Parent=MsG0780041423.01.T01
Chr7 CDS 90698498 90698590 90698498 ID=MsG0780041423.01.T01:cds;Parent=MsG0780041423.01.T01
Chr7 CDS 90699807 90699929 90699807 ID=MsG0780041423.01.T01:cds;Parent=MsG0780041423.01.T01
Chr7 CDS 90700023 90700175 90700023 ID=MsG0780041423.01.T01:cds;Parent=MsG0780041423.01.T01
Chr7 CDS 90700262 90700546 90700262 ID=MsG0780041423.01.T01:cds;Parent=MsG0780041423.01.T01
Chr7 CDS 90700658 90700876 90700658 ID=MsG0780041423.01.T01:cds;Parent=MsG0780041423.01.T01
Chr7 CDS 90701494 90701706 90701494 ID=MsG0780041423.01.T01:cds;Parent=MsG0780041423.01.T01
Chr7 mRNA 90696241 90701706 90696241 ID=MsG0780041423.01.T02;Parent=MsG0780041423.01;Name=MsG0780041423.01.T02;_AED=0.38;_eAED=0.43;_QI=188|0.9|0.72|1|0.9|0.81|11|0|558
Chr7 exon 90696241 90696516 90696241 ID=MsG0780041423.01.T02:exon:20868;Parent=MsG0780041423.01.T02
Chr7 five_prime_UTR 90696241 90696428 90696241 ID=MsG0780041423.01.T02:five_prime_utr;Parent=MsG0780041423.01.T02
Chr7 CDS 90696429 90696516 90696429 ID=MsG0780041423.01.T02:cds;Parent=MsG0780041423.01.T02
Chr7 CDS 90696597 90696685 90696597 ID=MsG0780041423.01.T02:cds;Parent=MsG0780041423.01.T02
Chr7 CDS 90696836 90696928 90696836 ID=MsG0780041423.01.T02:cds;Parent=MsG0780041423.01.T02
Chr7 CDS 90697449 90697565 90697449 ID=MsG0780041423.01.T02:cds;Parent=MsG0780041423.01.T02
Chr7 CDS 90697827 90698030 90697827 ID=MsG0780041423.01.T02:cds;Parent=MsG0780041423.01.T02
Chr7 CDS 90698498 90698590 90698498 ID=MsG0780041423.01.T02:cds;Parent=MsG0780041423.01.T02
Chr7 CDS 90699807 90699929 90699807 ID=MsG0780041423.01.T02:cds;Parent=MsG0780041423.01.T02
Chr7 CDS 90700023 90700175 90700023 ID=MsG0780041423.01.T02:cds;Parent=MsG0780041423.01.T02
Chr7 CDS 90700262 90700546 90700262 ID=MsG0780041423.01.T02:cds;Parent=MsG0780041423.01.T02
Chr7 CDS 90700658 90700876 90700658 ID=MsG0780041423.01.T02:cds;Parent=MsG0780041423.01.T02
Chr7 CDS 90701494 90701706 90701494 ID=MsG0780041423.01.T02:cds;Parent=MsG0780041423.01.T02
Gene Sequence

>MsG0780041423.01.T01

ATGGCGGGGACCGATGACAACAAAACACAACAACAATCCGCTGCAAAACCCCAAAAACAACCAAAACAACCAAAACCACAACAATCAGGTGGTGGAAAGAAGAAGGAAGTTAAGAAAGAAACTGGTTTAGGTTTGACCAATAAGAAGGCTGAAAACTTCGGAGAATGGTATTCCGAGGTTGTTGTGAATGGGGAAATGATTGAGTACTATGATATTTCTGGTTGCTATATTCTCAGACCTTGGTCAATGGCTATTTGGGAGATTATGCAAGCGTTTTTTGATCCAGAAATAAAGAAAATGAAGATCAAGAACTGCTACTTCCCTCTGTTTGTTTCTAATACTGTTCTGGAAAAGGAGAAGGACCATATCGAGGGTTTTGCTCCAGAGGTTGCTTGGGTGACCAAATCTGGAGAATCTGATTTAGAGATTCCTATTGCTATTCGTCCAACTAGTGAAACTGTTATGTATCCTTACTACTCTAAGTGGATAAGGGGACATCGTGACTTACCTTTGAAGCTTAATCAGTGGTGCAATGTTGTTAGATGGGAGTTCAGCAATCCCACACCATTCATCAGGCATTATTTTTTTTCCGGTACTTATACCAATTTTAATTGTAGGAGTCGTGAGTTTCTTTGGCAAGAAGGACACACCGCTTTTGCAACAAAGGAGGAAGCAGATACAGAGGTTCTCGAGATTTTGGAATTATATCGGCGTGTCTATGAAGAGTATTTGGCAGTTCCTGTCGTAAAGGGTAAGAAAAGTGAGCTTGAGAAGTTTGCTGGTGGACTTTACACTACCAGTGTTGAGGCATTTATTCCAAACACTGGTCGTGGCATACAAGGGGCAACTTCTCATTGTTTGGGACAAAATTTTGCTAAAATGTTCGAGATAAACTATGAAAATGAGAAGGGAGAGAAAGCAATGGTCTGGCAGAACTCATGGGCCTATAGTACTCGAACTATTGGGGTGATGGTGATGGTTCATGGTGATGACAAGGGATTGGTGCTGCCACCTAAAGTAGCTTCAGTTCAAGTCATTGTGATTCCTGTGCCCTACAAAGATGCTGATACTCAAGGAATCTTTGATGCCTGTACCGCAACTGTGAATATGTTGTTGGAAGCAGGAATTCGTGCTGAGTCAGATGCCAGAGACAACTACTCTCCTGGATGGAAGTATTCTCAGTGGGAAATGAAAGGTGTTCCTCTAAGGATTGAAATCGGGCCCAAGGATTTAGCAAATAAGCAGGTCCGTGCTGTTCGTCGTGATAGCGGAGCAAAGATCGACATTGGTAATGATGATTTGATTGAGGAAATAAAGAAGTTGCTCGATAATATTCAACAGAATTTGTTCGATGTTGCAAAACAAAAACGAGATGCATGTATTCAGATCATACATACATGGGATGAGTTTGTAGTAGCTTTGAATGAAAAAAAGATGATCTTAGCTCCTTGGTGTGACGAGGAGGAGGTGGAAAAAGATGTCAAAGCAAAGACAAAGGGTGAGACAGGAGCTGCAAAGACACTCTGTAGTCCCTTTGATCAGCCAGAACTCCCCGAAGGTATAAGCATTATTCAAGTGGAGGTGTTAACGTGTTATTATTTTATTCTACCTCCGTCTCTTTATAACTTAAGTGTCTCATTTGAGTTGTGCATGGTTCCTAAGAAAATGTTTAGTTAA

>MsG0780041423.01.T02

ATGGCGGGGACCGATGACAACAAAACACAACAACAATCCGCTGCAAAACCCCAAAAACAACCAAAACAACCAAAACCACAACAATCAGGTGGTGGAAAGAAGAAGGAAGTTAAGAAAGAAACTGGTTTAGGTTTGACCAATAAGAAGGCTGAAAACTTCGGAGAATGGTATTCCGAGGTTGTTGTGAATGGGGAAATGATTGAGTACTATGATATTTCTGGTTGCTATATTCTCAGACCTTGGTCAATGGCTATTTGGGAGATTATGCAAGCGTTTTTTGATCCAGAAATAAAGAAAATGAAGATCAAGAACTGCTACTTCCCTCTGTTTGTTTCTAATACTGTTCTGGAAAAGGAGAAGGACCATATCGAGGGTTTTGCTCCAGAGGTTGCTTGGGTGACCAAATCTGGAGAATCTGATTTAGAGATTCCTATTGCTATTCGTCCAACTAGTGAAACTGTTATGTATCCTTACTACTCTAAGTGGATAAGGGGACATCGTGACTTACCTTTGAAGCTTAATCAGTGGTGCAATGTTGTTAGATGGGAGTTCAGCAATCCCACACCATTCATCAGGCATTATTTTTTTTCCGGTACTTATACCAATTTTAATTGTAGGAGTCGTGAGTTTCTTTGGCAAGAAGGACACACCGCTTTTGCAACAAAGGAGGAAGCAGATACAGAGGTTCTCGAGATTTTGGAATTATATCGGCGTGTCTATGAAGAGTATTTGGCAGTTCCTGTCGTAAAGGGTAAGAAAAGTGAGCTTGAGAAGTTTGCTGGTGGACTTTACACTACCAGTGTTGAGGCATTTATTCCAAACACTGGTCGTGGCATACAAGGGGCAACTTCTCATTGTTTGGGACAAAATTTTGCTAAAATGTTCGAGATAAACTATGAAAATGAGAAGGGAGAGAAAGCAATGGTCTGGCAGAACTCATGGGCCTATAGTACTCGAACTATTGGGGTGATGGTGATGGTTCATGGTGATGACAAGGGATTGGTGCTGCCACCTAAAGTAGCTTCAGTTCAAGTCATTGTGATTCCTGTGCCCTACAAAGATGCTGATACTCAAGGAATCTTTGATGCCTGTACCGCAACTGTGAATATGTTGTTGGAAGCAGGAATTCGTGCTGAGTCAGATGCCAGAGACAACTACTCTCCTGGATGGAAGTATTCTCAGTGGGAAATGAAAGGTGTTCCTCTAAGGATTGAAATCGGGCCCAAGGATTTAGCAAATAAGCAGGTCCGTGCTGTTCGTCGTGATAGCGGAGCAAAGATCGACATTGGTAATGATGATTTGATTGAGGAAATAAAGAAGTTGCTCGATAATATTCAACAGAATTTGTTCGATGTTGCAAAACAAAAACGAGATGCATGTATTCAGATCATACATACATGGGATGAGTTTGTAGTAGCTTTGAATGAAAAAAAGATGATCTTAGCTCCTTGGTGTGACGAGGAGGAGGTGGAAAAAGATGTCAAAGCAAAGACAAAGGGTGAGACAGGAGCTGCAAAGACACTCTGTAGTCCCTTTGATCAGCCAGAACTCCCCGAAGGTATAAGCATTATTCAAGTGGAGGTGTTAACGTGTTATTATTTTATTCTACCTCCGTCTCTTTATAACTTAAGTGTCTCATTTGAGTTGTGCATGGTTCCTAAGAAAATGTTTAGTTAA

Protein sequence

>MsG0780041423.01.T01

MAGTDDNKTQQQSAAKPQKQPKQPKPQQSGGGKKKEVKKETGLGLTNKKAENFGEWYSEVVVNGEMIEYYDISGCYILRPWSMAIWEIMQAFFDPEIKKMKIKNCYFPLFVSNTVLEKEKDHIEGFAPEVAWVTKSGESDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRHYFFSGTYTNFNCRSREFLWQEGHTAFATKEEADTEVLEILELYRRVYEEYLAVPVVKGKKSELEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFEINYENEKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDADTQGIFDACTATVNMLLEAGIRAESDARDNYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRAVRRDSGAKIDIGNDDLIEEIKKLLDNIQQNLFDVAKQKRDACIQIIHTWDEFVVALNEKKMILAPWCDEEEVEKDVKAKTKGETGAAKTLCSPFDQPELPEGISIIQVEVLTCYYFILPPSLYNLSVSFELCMVPKKMFS*

>MsG0780041423.01.T02

MAGTDDNKTQQQSAAKPQKQPKQPKPQQSGGGKKKEVKKETGLGLTNKKAENFGEWYSEVVVNGEMIEYYDISGCYILRPWSMAIWEIMQAFFDPEIKKMKIKNCYFPLFVSNTVLEKEKDHIEGFAPEVAWVTKSGESDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRHYFFSGTYTNFNCRSREFLWQEGHTAFATKEEADTEVLEILELYRRVYEEYLAVPVVKGKKSELEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFEINYENEKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDADTQGIFDACTATVNMLLEAGIRAESDARDNYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRAVRRDSGAKIDIGNDDLIEEIKKLLDNIQQNLFDVAKQKRDACIQIIHTWDEFVVALNEKKMILAPWCDEEEVEKDVKAKTKGETGAAKTLCSPFDQPELPEGISIIQVEVLTCYYFILPPSLYNLSVSFELCMVPKKMFS*