AlfalfaGEDB | MsG0380016066.01

M. sativa cultivar ZhongmuNo.1 / MsG0380016066.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016066.01.T01	XP_024635775.1	92.391	184	14	0	1	184	1	184	5.24E-115	353

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016066.01.T01	B9DGY1	50	190	72	8	1	184	1	173	1.80E-45	162

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016066.01.T01	G7J8V4	92.391	184	14	0	1	184	1	184	2.50e-115	353

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080049023.01	MsG0380016066.01	0.810520	1.106742e-50	6.685665e-48
MsG0180000490.01	MsG0380016066.01	0.813923	2.001847e-51	1.324554e-48
MsG0180000719.01	MsG0380016066.01	0.828205	1.023181e-54	1.010147e-51
MsG0180000976.01	MsG0380016066.01	0.807870	4.092167e-50	2.304993e-47
MsG0180001523.01	MsG0380016066.01	0.853281	2.651013e-61	5.697945e-58
MsG0180001615.01	MsG0380016066.01	0.836627	8.376938e-57	1.061597e-53
MsG0180002891.01	MsG0380016066.01	0.829969	3.821863e-55	3.972503e-52
MsG0180003316.01	MsG0380016066.01	0.803986	2.683151e-49	1.367515e-46
MsG0180003352.01	MsG0380016066.01	0.865145	7.301228e-65	2.350857e-61
MsG0180003617.01	MsG0380016066.01	0.808875	2.498133e-50	1.444765e-47
MsG0180004662.01	MsG0380016066.01	0.855651	5.467561e-62	1.271303e-58
MsG0180004787.01	MsG0380016066.01	0.820656	6.112906e-53	4.865718e-50
MsG0180005338.01	MsG0380016066.01	0.877917	4.275153e-69	2.189081e-65
MsG0180005416.01	MsG0380016066.01	0.803098	4.099842e-49	2.042226e-46
MsG0180005545.01	MsG0380016066.01	0.862005	6.881567e-64	1.984794e-60
MsG0180005555.01	MsG0380016066.01	0.887044	2.015605e-72	1.475242e-68
MsG0180005556.01	MsG0380016066.01	0.883689	3.625934e-71	2.323048e-67
MsG0180005557.01	MsG0380016066.01	0.863864	1.835987e-64	5.649216e-61
MsG0180005558.01	MsG0380016066.01	0.876560	1.267487e-68	6.172396e-65
MsG0180005561.01	MsG0380016066.01	0.808361	3.216397e-50	1.835445e-47
MsG0180005672.01	MsG0380016066.01	0.802093	6.607642e-49	3.208410e-46
MsG0180005767.01	MsG0380016066.01	0.878164	3.504471e-69	1.810981e-65
MsG0180005854.01	MsG0380016066.01	0.811950	5.417456e-51	3.399311e-48
MsG0180005898.01	MsG0380016066.01	0.856505	3.074588e-62	7.355962e-59
MsG0180005991.01	MsG0380016066.01	0.827546	1.473564e-54	1.427004e-51
MsG0180006063.01	MsG0380016066.01	0.820711	5.936278e-53	4.732695e-50
MsG0180006183.01	MsG0380016066.01	-0.812069	5.103406e-51	3.212583e-48
MsG0280006319.01	MsG0380016066.01	0.878234	3.310510e-69	1.715640e-65
MsG0280006402.01	MsG0380016066.01	0.802079	6.651129e-49	3.228343e-46
MsG0280010696.01	MsG0380016066.01	0.852544	4.306997e-61	9.029698e-58
MsG0280010854.01	MsG0380016066.01	0.808375	3.194588e-50	1.823615e-47
MsG0280010905.01	MsG0380016066.01	0.811303	7.489229e-51	4.619201e-48
MsG0280010998.01	MsG0380016066.01	0.824646	7.212444e-54	6.427542e-51
MsG0280011020.01	MsG0380016066.01	0.850700	1.433051e-60	2.831226e-57
MsG0280011036.01	MsG0380016066.01	0.854223	1.420262e-61	3.149944e-58
MsG0280011169.01	MsG0380016066.01	0.857621	1.440352e-62	3.577241e-59
MsG0280011207.01	MsG0380016066.01	0.858655	7.098152e-63	1.824779e-59
MsG0280011362.01	MsG0380016066.01	0.823491	1.346214e-53	1.160899e-50
MsG0380012931.01	MsG0380016066.01	0.867249	1.572368e-65	5.452461e-62
MsG0380014144.01	MsG0380016066.01	0.841915	3.556418e-58	5.303982e-55
MsG0380014646.01	MsG0380016066.01	0.894365	2.640083e-75	2.617244e-71
MsG0380014735.01	MsG0380016066.01	0.800046	1.732007e-48	7.984733e-46
MsG0380014933.01	MsG0380016066.01	0.828402	9.172539e-55	9.107863e-52
MsG0380015393.01	MsG0380016066.01	-0.853407	2.439418e-61	5.265427e-58
MsG0380015744.01	MsG0380016066.01	0.803303	3.717606e-49	1.861663e-46
MsG0380015828.01	MsG0380016066.01	0.838531	2.721407e-57	3.655338e-54
MsG0380016065.01	MsG0380016066.01	0.884543	1.752939e-71	1.161124e-67
MsG0380016066.01	MsG0380016151.01	0.867785	1.059646e-65	3.744959e-62
MsG0380016066.01	MsG0380016492.01	0.813074	3.076871e-51	1.989410e-48
MsG0380016066.01	MsG0380016762.01	0.800793	1.219958e-48	5.731631e-46
MsG0380016066.01	MsG0380016861.01	0.803429	3.500988e-49	1.758914e-46
MsG0380016066.01	MsG0380016936.01	0.841694	4.068433e-58	6.025188e-55
MsG0380016066.01	MsG0380016997.01	0.878761	2.161896e-69	1.142397e-65
MsG0380016066.01	MsG0380017353.01	0.887428	1.438892e-72	1.069794e-68
MsG0380016066.01	MsG0380017666.01	-0.833686	4.623975e-56	5.364500e-53
MsG0380016066.01	MsG0380017918.01	0.894310	2.780814e-75	2.749980e-71
MsG0380016066.01	MsG0480019573.01	0.840229	9.860068e-58	1.395523e-54
MsG0380016066.01	MsG0480020027.01	0.802617	5.152060e-49	2.535300e-46
MsG0380016066.01	MsG0480020689.01	0.826815	2.205807e-54	2.091043e-51
MsG0380016066.01	MsG0480020704.01	0.848288	6.741995e-60	1.231334e-56
MsG0380016066.01	MsG0480020797.01	-0.822777	1.975795e-53	1.669818e-50
MsG0380016066.01	MsG0480021151.01	0.877814	4.646763e-69	2.369218e-65
MsG0380016066.01	MsG0480021420.01	0.810092	1.369069e-50	8.177647e-48
MsG0380016066.01	MsG0480021892.01	0.837517	4.961823e-57	6.461505e-54
MsG0380016066.01	MsG0480021895.01	0.811222	7.798422e-51	4.799840e-48
MsG0380016066.01	MsG0480021999.01	0.828744	7.582432e-55	7.603206e-52
MsG0380016066.01	MsG0480022002.01	0.840069	1.085493e-57	1.528793e-54
MsG0380016066.01	MsG0480022664.01	0.822673	2.088852e-53	1.760170e-50
MsG0380016066.01	MsG0480022805.01	0.845484	3.947447e-59	6.587953e-56
MsG0380016066.01	MsG0480023125.01	-0.818343	2.059441e-52	1.537644e-49
MsG0380016066.01	MsG0480023375.01	0.878362	2.987158e-69	1.555285e-65
MsG0380016066.01	MsG0480023386.01	0.854402	1.260951e-61	2.812552e-58
MsG0380016066.01	MsG0480023395.01	0.814915	1.207829e-51	8.208971e-49
MsG0380016066.01	MsG0480023616.01	0.801688	7.999993e-49	3.844588e-46
MsG0380016066.01	MsG0480023641.01	0.806594	7.625451e-50	4.155254e-47
MsG0380016066.01	MsG0480023708.01	0.816966	4.211155e-52	3.027654e-49
MsG0380016066.01	MsG0580024201.01	0.891415	4.057796e-74	3.554532e-70
MsG0380016066.01	MsG0580024269.01	0.804146	2.485287e-49	1.271834e-46
MsG0380016066.01	MsG0580024386.01	0.812310	4.521652e-51	2.865085e-48
MsG0380016066.01	MsG0580024471.01	0.872419	3.227561e-67	1.349811e-63
MsG0380016066.01	MsG0580024538.01	0.882799	7.694521e-71	4.754369e-67
MsG0380016066.01	MsG0580024567.01	0.857000	2.198111e-62	5.345105e-59
MsG0380016066.01	MsG0580024763.01	0.871424	6.908968e-67	2.786093e-63
MsG0380016066.01	MsG0580024764.01	0.857530	1.533292e-62	3.796097e-59
MsG0380016066.01	MsG0580024766.01	0.808812	2.576818e-50	1.487796e-47
MsG0380016066.01	MsG0580024768.01	0.807771	4.295969e-50	2.413574e-47
MsG0380016066.01	MsG0580025413.01	0.845208	4.688073e-59	7.755134e-56
MsG0380016066.01	MsG0580027098.01	0.811253	7.679145e-51	4.730293e-48
MsG0380016066.01	MsG0580027099.01	0.826314	2.903609e-54	2.713484e-51
MsG0380016066.01	MsG0580027254.01	0.821913	3.135760e-53	2.585597e-50
MsG0380016066.01	MsG0580027331.01	0.821802	3.326574e-53	2.734321e-50
MsG0380016066.01	MsG0580027845.01	0.812018	5.234309e-51	3.290425e-48
MsG0380016066.01	MsG0580027899.01	0.817778	2.764096e-52	2.031846e-49
MsG0380016066.01	MsG0580028013.01	0.864451	1.204705e-64	3.784515e-61
MsG0380016066.01	MsG0580028159.01	0.815113	1.091757e-51	7.459982e-49
MsG0380016066.01	MsG0580028177.01	0.804181	2.443013e-49	1.251323e-46
MsG0380016066.01	MsG0580028397.01	0.851863	6.725609e-61	1.379682e-57
MsG0380016066.01	MsG0580028398.01	0.840410	8.844519e-58	1.258803e-54
MsG0380016066.01	MsG0580028403.01	0.862501	4.847329e-64	1.422831e-60
MsG0380016066.01	MsG0580028925.01	0.827473	1.534249e-54	1.482732e-51
MsG0380016066.01	MsG0580029276.01	0.801627	8.236175e-49	3.951950e-46
MsG0380016066.01	MsG0580029389.01	0.837956	3.828185e-57	5.052948e-54
MsG0380016066.01	MsG0580029682.01	0.827129	1.854903e-54	1.774591e-51
MsG0380016066.01	MsG0580029719.01	0.803085	4.124652e-49	2.053913e-46
MsG0380016066.01	MsG0580029881.01	0.828005	1.143365e-54	1.122260e-51
MsG0380016066.01	MsG0680031997.01	0.811486	6.835789e-51	4.236852e-48
MsG0380016066.01	MsG0680032000.01	0.819855	9.327017e-53	7.261565e-50
MsG0380016066.01	MsG0680032003.01	0.825313	5.019269e-54	4.558761e-51
MsG0380016066.01	MsG0680032245.01	0.818889	1.548943e-52	1.174031e-49
MsG0380016066.01	MsG0680032308.01	0.813509	2.469827e-51	1.616043e-48
MsG0380016066.01	MsG0680032512.01	0.822527	2.258152e-53	1.894980e-50
MsG0380016066.01	MsG0680034724.01	0.823822	1.126276e-53	9.804049e-51
MsG0380016066.01	MsG0680035612.01	0.847653	1.009229e-59	1.806330e-56
MsG0380016066.01	MsG0680035664.01	0.833230	6.008238e-56	6.876339e-53
MsG0380016066.01	MsG0680035665.01	0.854039	1.604806e-61	3.537894e-58
MsG0380016066.01	MsG0780036060.01	-0.820560	6.430306e-53	5.105120e-50
MsG0380016066.01	MsG0780036586.01	0.801209	1.003243e-48	4.763462e-46
MsG0380016066.01	MsG0780036846.01	0.813121	3.004534e-51	1.945074e-48
MsG0380016066.01	MsG0780037915.01	0.836686	8.090945e-57	1.027266e-53
MsG0380016066.01	MsG0780037944.01	0.840101	1.065155e-57	1.501617e-54
MsG0380016066.01	MsG0780037946.01	0.844220	8.650138e-59	1.387026e-55
MsG0380016066.01	MsG0780037963.01	0.823037	1.717895e-53	1.462628e-50
MsG0380016066.01	MsG0780037982.01	0.827152	1.831705e-54	1.753610e-51
MsG0380016066.01	MsG0780039805.01	0.806117	9.613358e-50	5.175328e-47
MsG0380016066.01	MsG0780039986.01	0.820531	6.529532e-53	5.179760e-50
MsG0380016066.01	MsG0780040154.01	0.818932	1.514234e-52	1.149195e-49
MsG0380016066.01	MsG0780040155.01	0.856270	3.603994e-62	8.553543e-59
MsG0380016066.01	MsG0780040350.01	0.830005	3.746676e-55	3.898220e-52
MsG0380016066.01	MsG0780040530.01	0.820725	5.894535e-53	4.701114e-50
MsG0380016066.01	MsG0780040670.01	-0.801987	6.946978e-49	3.363996e-46
MsG0380016066.01	MsG0780040849.01	0.819909	9.064344e-53	7.067996e-50
MsG0380016066.01	MsG0780040914.01	-0.802967	4.363639e-49	2.166453e-46
MsG0380016066.01	MsG0780041002.01	0.835743	1.404900e-56	1.733797e-53
MsG0380016066.01	MsG0780041256.01	0.813123	3.002029e-51	1.943532e-48
MsG0380016066.01	MsG0780041668.01	0.837637	4.621431e-57	6.040610e-54
MsG0380016066.01	MsG0780041807.01	0.804914	1.718517e-49	8.970966e-47
MsG0380016066.01	MsG0780041823.01	-0.814848	1.249771e-51	8.479141e-49
MsG0380016066.01	MsG0880041850.01	0.810657	1.033460e-50	6.266189e-48
MsG0380016066.01	MsG0880042001.01	0.804042	2.611323e-49	1.332812e-46
MsG0380016066.01	MsG0880042030.01	0.818497	1.900235e-52	1.424775e-49
MsG0380016066.01	MsG0880042256.01	0.839211	1.814268e-57	2.488133e-54
MsG0380016066.01	MsG0880042343.01	0.801309	9.567148e-49	4.554149e-46
MsG0380016066.01	MsG0880042690.01	0.841288	5.203088e-58	7.608834e-55
MsG0380016066.01	MsG0880043235.01	0.818758	1.658354e-52	1.252390e-49
MsG0380016066.01	MsG0880043515.01	0.826380	2.800348e-54	2.622015e-51
MsG0380016066.01	MsG0880043621.01	0.808959	2.396519e-50	1.389133e-47
MsG0380016066.01	MsG0880043870.01	0.812768	3.590629e-51	2.302808e-48
MsG0380016066.01	MsG0880044105.01	0.868674	5.478615e-66	1.998848e-62
MsG0380016066.01	MsG0880044317.01	0.849198	3.772366e-60	7.097276e-57
MsG0380016066.01	MsG0880044318.01	0.855229	7.256521e-62	1.663530e-58
MsG0380016066.01	MsG0880044411.01	0.833515	5.102510e-56	5.889869e-53
MsG0380016066.01	MsG0880044436.01	0.830977	2.166704e-55	2.319351e-52
MsG0380016066.01	MsG0880044453.01	0.876920	9.514380e-69	4.695767e-65
MsG0380016066.01	MsG0880044545.01	0.804296	2.313002e-49	1.188228e-46
MsG0380016066.01	MsG0880044548.01	0.801934	7.123046e-49	3.444644e-46
MsG0380016066.01	MsG0880044558.01	0.807078	6.023840e-50	3.323831e-47
MsG0380016066.01	MsG0880044834.01	0.830652	2.602888e-55	2.759581e-52
MsG0380016066.01	MsG0880045394.01	0.873421	1.490091e-67	6.463086e-64
MsG0380016066.01	MsG0880045409.01	0.807027	6.177902e-50	3.404399e-47
MsG0380016066.01	MsG0880045725.01	-0.814977	1.170118e-51	7.966445e-49
MsG0380016066.01	MsG0880045761.01	0.843234	1.587913e-58	2.468449e-55
MsG0380016066.01	MsG0880046048.01	0.814936	1.195132e-51	8.127370e-49
MsG0380016066.01	MsG0880046160.01	0.855363	6.636057e-62	1.528440e-58
MsG0380016066.01	MsG0880046324.01	0.826536	2.570878e-54	2.417664e-51
MsG0380016066.01	MsG0880046408.01	0.826704	2.343660e-54	2.214648e-51
MsG0380016066.01	MsG0880046968.01	0.847513	1.102891e-59	1.965079e-56
MsG0380016066.01	MsG0880046969.01	0.856819	2.486437e-62	6.008483e-59
MsG0380016066.01	MsG0880047090.01	-0.802109	6.556609e-49	3.184893e-46
MsG0380016066.01	MsG0880047107.01	0.800628	1.318201e-48	6.167665e-46
MsG0380016066.01	MsG0880047111.01	0.810515	1.109518e-50	6.701509e-48
MsG0380016066.01	MsG0880047207.01	0.809837	1.553096e-50	9.215855e-48
MsG0380016066.01	MsG0880047313.01	0.820954	5.219254e-53	4.189792e-50
MsG0380016066.01	MsG0880047660.01	0.851351	9.391138e-61	1.895665e-57
MsG0280006533.01	MsG0380016066.01	0.847966	8.275708e-60	1.495774e-56
MsG0280007423.01	MsG0380016066.01	0.886655	2.830728e-72	2.039993e-68
MsG0280007511.01	MsG0380016066.01	0.818700	1.709827e-52	1.289089e-49
MsG0280007653.01	MsG0380016066.01	0.804329	2.275758e-49	1.170099e-46
MsG0280008072.01	MsG0380016066.01	0.807548	4.789813e-50	2.675419e-47
MsG0280008139.01	MsG0380016066.01	0.828674	7.886105e-55	7.892182e-52
MsG0280009863.01	MsG0380016066.01	0.801462	8.903728e-49	4.254598e-46
MsG0280010455.01	MsG0380016066.01	0.820003	8.629310e-53	6.746216e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016066.01.T01	MTR_3g082750	92.391	184	14	0	1	184	1	184	6.34e-119	353

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016066.01.T01	AT3G07700	50.000	190	72	8	1	184	1	173	1.83e-46	162
MsG0380016066.01.T01	AT3G07700	50.000	190	72	8	1	184	1	173	1.83e-46	162
MsG0380016066.01.T01	AT3G07700	50.000	190	72	8	1	184	1	173	1.83e-46	162
MsG0380016066.01.T01	AT3G07700	50.000	190	72	8	1	184	1	173	2.69e-46	162

Find 35 sgRNAs with CRISPR-Local

Find 43 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGCTCAAAGCAAGCTGTTAA+TGG	0.283062	3:-78624165	MsG0380016066.01.T01:CDS
GAAATGCCGCCATCAAAATT+AGG	0.325630	3:-78624276	MsG0380016066.01.T01:CDS
ACCCTAAATGGCAGTAATAA+TGG	0.329958	3:-78624475	None:intergenic
AGCTGTTAATGGAGCAAGTT+TGG	0.341642	3:-78624154	MsG0380016066.01.T01:CDS
TTCGTTGTCTTTGTCAATGC+TGG	0.352992	3:+78624114	None:intergenic
ACAATGCAAAATGGGCATAT+CGG	0.381897	3:-78623936	MsG0380016066.01.T01:CDS
CCAATGAAAATTACAGTTCC+TGG	0.383016	3:-78624017	MsG0380016066.01.T01:CDS
TTCAAGTGGTGGAAGTTCAT+TGG	0.384033	3:+78624080	None:intergenic
TAATGGTAGAGCTGTTAAAA+TGG	0.385147	3:-78624250	MsG0380016066.01.T01:CDS
CCATCAAAATTAGGTAATAA+TGG	0.389209	3:-78624267	MsG0380016066.01.T01:CDS
CGAAGATCACTAGACAATCT+TGG	0.421184	3:-78624408	MsG0380016066.01.T01:CDS
CAATGCAAAATGGGCATATC+GGG	0.428931	3:-78623935	MsG0380016066.01.T01:CDS
GGAAGTTCATTGGAGATTGT+AGG	0.432975	3:+78624090	None:intergenic
CCTCAGATGAAGGCTTCAGT+TGG	0.474873	3:-78624041	MsG0380016066.01.T01:CDS
TGGTAAATTTCGTAGATTTG+TGG	0.513813	3:-78624316	MsG0380016066.01.T01:CDS
GGCAGAGATCAATTGATGTA+TGG	0.520886	3:-78623996	MsG0380016066.01.T01:CDS
CTCAGATGAAGGCTTCAGTT+GGG	0.526088	3:-78624040	MsG0380016066.01.T01:CDS
TTATTGTAACAATATAGAAT+CGG	0.529878	3:-78624439	MsG0380016066.01.T01:CDS
TAAATTTCGTAGATTTGTGG+TGG	0.532222	3:-78624313	MsG0380016066.01.T01:CDS
GTCTCCACTTTATTCTCCGA+CGG	0.532763	3:+78624195	None:intergenic
GTCTTTGTCAATGCTGGAGT+AGG	0.534650	3:+78624120	None:intergenic
CCAACTGAAGCCTTCATCTG+AGG	0.557528	3:+78624041	None:intergenic
ATAAATTGTCAAAGAATGAA+AGG	0.558325	3:-78624362	MsG0380016066.01.T01:CDS
CAACTGAAGCCTTCATCTGA+GGG	0.559152	3:+78624042	None:intergenic
AATAAAGTGGAGACAGTCAA+TGG	0.564916	3:-78624186	MsG0380016066.01.T01:CDS
TAGAGCTGTTAAAATGGTAC+CGG	0.578175	3:-78624244	MsG0380016066.01.T01:CDS
TACATCAATTGATCTCTGCC+AGG	0.581512	3:+78623999	None:intergenic
TGGCTTCACAGAAGAAAAGC+AGG	0.586577	3:-78623912	MsG0380016066.01.T01:CDS
GACACCGTCGGAGAATAAAG+TGG	0.590443	3:-78624199	MsG0380016066.01.T01:CDS
TGCAAAATGGGCATATCGGG+TGG	0.607669	3:-78623932	MsG0380016066.01.T01:CDS
ACATCTGATAAGTTAAAGAG+TGG	0.637198	3:-78624336	MsG0380016066.01.T01:CDS
TTGCATTGTCGAAAAGAACA+CGG	0.647652	3:+78623950	None:intergenic
GCAGTAATAATGGCTTTGCA+TGG	0.669620	3:-78624465	MsG0380016066.01.T01:CDS
GACACGTAAAGAAAGAACAA+AGG	0.679744	3:+78623972	None:intergenic
TTCACAGAAGAAAAGCAGGT+AGG	0.687391	3:-78623908	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATTGTAACAATATAGAAT+CGG	-	Chr3:78623938-78623957	MsG0380016066.01.T01:CDS	15.0%
!!	ATAAATTGTCAAAGAATGAA+AGG	-	Chr3:78624015-78624034	MsG0380016066.01.T01:CDS	20.0%
!	CCATCAAAATTAGGTAATAA+TGG	-	Chr3:78624110-78624129	MsG0380016066.01.T01:CDS	25.0%
!!	CCATTATTACCTAATTTTGA+TGG	+	Chr3:78624113-78624132	None:intergenic	25.0%
!!!	TTATTACCTAATTTTGATGG+CGG	+	Chr3:78624110-78624129	None:intergenic	25.0%
	ACATCTGATAAGTTAAAGAG+TGG	-	Chr3:78624041-78624060	MsG0380016066.01.T01:CDS	30.0%
	TAAATTTCGTAGATTTGTGG+TGG	-	Chr3:78624064-78624083	MsG0380016066.01.T01:CDS	30.0%
	TAATGGTAGAGCTGTTAAAA+TGG	-	Chr3:78624127-78624146	MsG0380016066.01.T01:CDS	30.0%
	TGGTAAATTTCGTAGATTTG+TGG	-	Chr3:78624061-78624080	MsG0380016066.01.T01:CDS	30.0%
!	TCTTTTCGACAATGCAAAAT+GGG	-	Chr3:78624433-78624452	MsG0380016066.01.T01:CDS	30.0%
!	TTCTTTTCGACAATGCAAAA+TGG	-	Chr3:78624432-78624451	MsG0380016066.01.T01:CDS	30.0%
!!!	AAAACTTTTAGCTCTTCAAG+TGG	+	Chr3:78624314-78624333	None:intergenic	30.0%
	AATAAAGTGGAGACAGTCAA+TGG	-	Chr3:78624191-78624210	MsG0380016066.01.T01:CDS	35.0%
	ACAATGCAAAATGGGCATAT+CGG	-	Chr3:78624441-78624460	MsG0380016066.01.T01:CDS	35.0%
	CCAATGAAAATTACAGTTCC+TGG	-	Chr3:78624360-78624379	MsG0380016066.01.T01:CDS	35.0%
	GACACGTAAAGAAAGAACAA+AGG	+	Chr3:78624408-78624427	None:intergenic	35.0%
	TAGAGCTGTTAAAATGGTAC+CGG	-	Chr3:78624133-78624152	MsG0380016066.01.T01:CDS	35.0%
	TTGCATTGTCGAAAAGAACA+CGG	+	Chr3:78624430-78624449	None:intergenic	35.0%
!	CCAGGAACTGTAATTTTCAT+TGG	+	Chr3:78624363-78624382	None:intergenic	35.0%
	AGCAAAAAGAAAGACACCGT+CGG	-	Chr3:78624166-78624185	MsG0380016066.01.T01:CDS	40.0%
	AGCTGTTAATGGAGCAAGTT+TGG	-	Chr3:78624223-78624242	MsG0380016066.01.T01:CDS	40.0%
	CAATGCAAAATGGGCATATC+GGG	-	Chr3:78624442-78624461	MsG0380016066.01.T01:CDS	40.0%
	CGAAGATCACTAGACAATCT+TGG	-	Chr3:78623969-78623988	MsG0380016066.01.T01:CDS	40.0%
	GAAATGCCGCCATCAAAATT+AGG	-	Chr3:78624101-78624120	MsG0380016066.01.T01:CDS	40.0%
	GGAAGTTCATTGGAGATTGT+AGG	+	Chr3:78624290-78624309	None:intergenic	40.0%
	GGCAGAGATCAATTGATGTA+TGG	-	Chr3:78624381-78624400	MsG0380016066.01.T01:CDS	40.0%
	TACATCAATTGATCTCTGCC+AGG	+	Chr3:78624381-78624400	None:intergenic	40.0%
	TTCGTTGTCTTTGTCAATGC+TGG	+	Chr3:78624266-78624285	None:intergenic	40.0%
!	AAAGTTTTGCCCTCAGATGA+AGG	-	Chr3:78624326-78624345	MsG0380016066.01.T01:CDS	40.0%
!	GCAGTAATAATGGCTTTGCA+TGG	-	Chr3:78623912-78623931	MsG0380016066.01.T01:CDS	40.0%
!	TTCAAGTGGTGGAAGTTCAT+TGG	+	Chr3:78624300-78624319	None:intergenic	40.0%
!!	CTTTTTGCTATCTCAGTTGC+CGG	+	Chr3:78624155-78624174	None:intergenic	40.0%
!!!	ACTTTTAGCTCTTCAAGTGG+TGG	+	Chr3:78624311-78624330	None:intergenic	40.0%
	CAACTGAAGCCTTCATCTGA+GGG	+	Chr3:78624338-78624357	None:intergenic	45.0%
	CTCAGATGAAGGCTTCAGTT+GGG	-	Chr3:78624337-78624356	MsG0380016066.01.T01:CDS	45.0%
	GGCTCAAAGCAAGCTGTTAA+TGG	-	Chr3:78624212-78624231	MsG0380016066.01.T01:CDS	45.0%
	GTCTCCACTTTATTCTCCGA+CGG	+	Chr3:78624185-78624204	None:intergenic	45.0%
	GTCTTTGTCAATGCTGGAGT+AGG	+	Chr3:78624260-78624279	None:intergenic	45.0%
	TGGCTTCACAGAAGAAAAGC+AGG	-	Chr3:78624465-78624484	MsG0380016066.01.T01:CDS	45.0%
	CCAACTGAAGCCTTCATCTG+AGG	+	Chr3:78624339-78624358	None:intergenic	50.0%
	CCTCAGATGAAGGCTTCAGT+TGG	-	Chr3:78624336-78624355	MsG0380016066.01.T01:CDS	50.0%
	GACACCGTCGGAGAATAAAG+TGG	-	Chr3:78624178-78624197	MsG0380016066.01.T01:CDS	50.0%
	TGCAAAATGGGCATATCGGG+TGG	-	Chr3:78624445-78624464	MsG0380016066.01.T01:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	78623909	78624490	78623909	ID=MsG0380016066.01;Name=MsG0380016066.01
Chr3	mRNA	78623909	78624490	78623909	ID=MsG0380016066.01.T01;Parent=MsG0380016066.01;Name=MsG0380016066.01.T01;_AED=0.46;_eAED=0.46;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|193
Chr3	exon	78623909	78624490	78623909	ID=MsG0380016066.01.T01:exon:17525;Parent=MsG0380016066.01.T01
Chr3	CDS	78623909	78624490	78623909	ID=MsG0380016066.01.T01:cds;Parent=MsG0380016066.01.T01

Gene Sequence

>MsG0380016066.01.T01

ATGGCAGTAATAATGGCTTTGCATGGTTGTTATTGTAACAATATAGAATCGGTAAATCAGCGAAGATCACTAGACAATCTTGGTTTTACAAGCTCAATTTCATCTCATAAATTGTCAAAGAATGAAAGGTCAACATCTGATAAGTTAAAGAGTGGTAAATTTCGTAGATTTGTGGTGGAAATGCGACAGACAGAAATGCCGCCATCAAAATTAGGTAATAATGGTAGAGCTGTTAAAATGGTACCGGCAACTGAGATAGCAAAAAGAAAGACACCGTCGGAGAATAAAGTGGAGACAGTCAATGGCTCAAAGCAAGCTGTTAATGGAGCAAGTTTGGTAAGAAGAGATCCTACTCCAGCATTGACAAAGACAACGAAACCTACAATCTCCAATGAACTTCCACCACTTGAAGAGCTAAAAGTTTTGCCCTCAGATGAAGGCTTCAGTTGGGCCAATGAAAATTACAGTTCCTGGCAGAGATCAATTGATGTATGGTCCTTTGTTCTTTCTTTACGTGTCCGTGTTCTTTTCGACAATGCAAAATGGGCATATCGGGTGGCTTCACAGAAGAAAAGCAGGTAG

Protein sequence

>MsG0380016066.01.T01

MAVIMALHGCYCNNIESVNQRRSLDNLGFTSSISSHKLSKNERSTSDKLKSGKFRRFVVEMRQTEMPPSKLGNNGRAVKMVPATEIAKRKTPSENKVETVNGSKQAVNGASLVRRDPTPALTKTTKPTISNELPPLEELKVLPSDEGFSWANENYSSWQRSIDVWSFVLSLRVRVLFDNAKWAYRVASQKKSR*