AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040965.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040965.01.T01 MTR_7g101840 75.478 575 67 8 1 519 1 557 0.0 793
MsG0780040965.01.T01 MTR_1g063850 46.545 550 235 5 19 519 22 561 7.26e-157 459
MsG0780040965.01.T01 MTR_3g118290 26.478 389 231 6 175 514 187 569 5.54e-25 108
MsG0780040965.01.T01 MTR_3g033420 28.175 252 157 6 279 515 160 402 1.41e-18 88.2
MsG0780040965.01.T01 MTR_3g033150 34.328 134 88 0 382 515 20 153 2.06e-18 82.8
MsG0780040965.01.T01 MTR_1g007370 34.058 138 84 2 381 517 418 549 1.43e-14 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040965.01.T01 AT2G36990 39.350 554 237 10 29 519 30 547 5.70e-109 335
MsG0780040965.01.T01 AT1G08540 27.473 364 211 6 198 515 212 568 9.77e-28 117
MsG0780040965.01.T01 AT3G53920 34.286 140 92 0 377 516 431 570 5.10e-15 78.2
MsG0780040965.01.T01 AT5G13730 32.836 134 90 0 381 514 281 414 1.52e-13 73.2

Find 113 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAAAAGTTGCTTTGTTTC+AGG 0.101939 7:-84937206 None:intergenic
CTGTTCCTGCAGCTTCTTCT+TGG 0.172620 7:+84936267 MsG0780040965.01.T01:CDS
ATCAAACTTCAGTCTCATTT+TGG 0.184227 7:+84937380 MsG0780040965.01.T01:CDS
GAGAAATCTTTGTCAGAAAT+TGG 0.213726 7:+84940279 MsG0780040965.01.T01:CDS
CTGAGTACCTTCCTTTCTTT+TGG 0.217852 7:-84940228 None:intergenic
TCGCTTTGCTATTTCTTCTT+TGG 0.231759 7:-84938428 None:intergenic
AGAATTCTTCCTTCCCCTTC+AGG 0.247343 7:+84936072 MsG0780040965.01.T01:CDS
ATGCTCTGCGCTTGTTCTTA+TGG 0.275437 7:+84937180 MsG0780040965.01.T01:CDS
GGTTCAGTACTTACGCTTAC+TGG 0.283353 7:+84937796 MsG0780040965.01.T01:CDS
TAACAAAAGAAATAGGAATA+AGG 0.300353 7:-84936098 None:intergenic
AATATCATAGGAGGGAAGTA+TGG 0.346762 7:+84937728 MsG0780040965.01.T01:intron
TACCGGCAGACGAATTGTTT+TGG 0.351152 7:-84937859 None:intergenic
ACATTAAACACGAGGGTAAC+AGG 0.352590 7:+84936495 MsG0780040965.01.T01:CDS
TTACTGGTAACAAAAGAAAT+AGG 0.359802 7:-84936105 None:intergenic
GGGGAAGGAAGAATTCTAGA+AGG 0.369676 7:-84936066 None:intergenic
ACTGAACCGGCAACCAGCTT+GGG 0.373184 7:-84937781 None:intergenic
GGTGGATAAGGCAAACAATA+AGG 0.378088 7:+84937817 MsG0780040965.01.T01:CDS
TCAATTGATTGCTCAAATAC+AGG 0.378903 7:+84937244 MsG0780040965.01.T01:CDS
TCAAACCCCAAGCTGGTTGC+CGG 0.391074 7:+84937775 MsG0780040965.01.T01:CDS
GATGATGATTCACTATCTCT+TGG 0.396948 7:+84936880 MsG0780040965.01.T01:CDS
GGAACCAACTTTGGCTGAAT+GGG 0.405490 7:+84937406 MsG0780040965.01.T01:CDS
CTTTGCTATTTCTTCTTTGG+TGG 0.415934 7:-84938425 None:intergenic
AGTGGCTGAAGAGTTGAAAT+TGG 0.417620 7:+84936837 MsG0780040965.01.T01:CDS
GCCTGCTGATGGTTTCCAAT+GGG 0.420481 7:+84936762 MsG0780040965.01.T01:CDS
AGGAATTACAGTAGATAGGT+TGG 0.431039 7:+84938453 MsG0780040965.01.T01:CDS
GGCTGAATGGGCAGATGGTG+TGG 0.432577 7:+84937418 MsG0780040965.01.T01:CDS
TACTGAACCGGCAACCAGCT+TGG 0.433442 7:-84937782 None:intergenic
CAAGGTGTTGGGTGTGTGTA+AGG 0.434469 7:+84940302 MsG0780040965.01.T01:CDS
GGGAACCAACTTTGGCTGAA+TGG 0.437966 7:+84937405 MsG0780040965.01.T01:CDS
GTATGCAGCAGTTGCATCTT+CGG 0.440704 7:+84936577 MsG0780040965.01.T01:CDS
CTAAGATTTGGTATTGAAGA+TGG 0.445284 7:+84940252 MsG0780040965.01.T01:CDS
AACAAAAGAAATAGGAATAA+GGG 0.451343 7:-84936097 None:intergenic
TAAGGAGAGGGTCAGACAAT+TGG 0.454557 7:+84940320 MsG0780040965.01.T01:CDS
AAGGTACTCAGGCTAAGATT+TGG 0.454745 7:+84940240 MsG0780040965.01.T01:CDS
GAAGAAACGAAATCCTCTTC+CGG 0.460270 7:-84936721 None:intergenic
GCTTGAGCTTGTTCAACGCT+TGG 0.460500 7:-84940347 None:intergenic
TTTGCTATTTCTTCTTTGGT+GGG 0.461967 7:-84938424 None:intergenic
TACCTAGGAGGTTGCGTACA+TGG 0.462181 7:-84940197 None:intergenic
TTTCGATGGAGCGAGCTGTA+TGG 0.462748 7:+84938506 MsG0780040965.01.T01:CDS
AGACTCGGACACAACTTTCC+AGG 0.467003 7:+84938531 MsG0780040965.01.T01:CDS
ATTGGCTTCTTCGCCGGAAG+AGG 0.467488 7:+84936708 MsG0780040965.01.T01:CDS
TCAGAAATTGGCAAGGTGTT+GGG 0.477054 7:+84940291 MsG0780040965.01.T01:CDS
TCAACTATGCTGCCTGCTGA+TGG 0.478314 7:+84936751 MsG0780040965.01.T01:CDS
TTTATATAATTGCTCAACCT+TGG 0.481097 7:-84940437 None:intergenic
ATGATGATTCACTATCTCTT+GGG 0.481618 7:+84936881 MsG0780040965.01.T01:CDS
TTCCAAAACAATTCGTCTGC+CGG 0.487773 7:+84937857 MsG0780040965.01.T01:CDS
GTCAGAAATTGGCAAGGTGT+TGG 0.493182 7:+84940290 MsG0780040965.01.T01:CDS
TTCGATGGAGCGAGCTGTAT+GGG 0.496745 7:+84938507 MsG0780040965.01.T01:CDS
CTTCAGATTGGCTTCTTCGC+CGG 0.497531 7:+84936702 MsG0780040965.01.T01:intron
AAGAGCATCGTGATGAGTAT+AGG 0.501804 7:+84936336 MsG0780040965.01.T01:CDS
GCTGAATGGGCAGATGGTGT+GGG 0.502616 7:+84937419 MsG0780040965.01.T01:CDS
AGTAAGCGTAAGTACTGAAC+CGG 0.503207 7:-84937794 None:intergenic
GAGTAGGAATTACAGTAGAT+AGG 0.505400 7:+84938449 MsG0780040965.01.T01:CDS
CTTACGCTTACTGGTGGATA+AGG 0.505548 7:+84937805 MsG0780040965.01.T01:CDS
TACAAGAACTCCGCTTTCGA+TGG 0.512841 7:+84938492 MsG0780040965.01.T01:CDS
CTCAAAACAAGCTGCTGCAG+TGG 0.518614 7:+84936819 MsG0780040965.01.T01:CDS
TGCCTGCTGATGGTTTCCAA+TGG 0.519704 7:+84936761 MsG0780040965.01.T01:CDS
ACAAAATCGTGAGGTCAATA+CGG 0.521532 7:+84937018 MsG0780040965.01.T01:CDS
ACGTAACCTTCTTTGTACAT+TGG 0.527391 7:-84937120 None:intergenic
TCTGCCCATTCAGCCAAAGT+TGG 0.529812 7:-84937410 None:intergenic
AGGGAAGTATGGGCCTTATG+AGG 0.530509 7:+84937739 MsG0780040965.01.T01:CDS
TACCGGCGATGTTGATGAGT+TGG 0.531127 7:+84936545 MsG0780040965.01.T01:CDS
GCGAGCTGTATGGGCAGACT+CGG 0.531907 7:+84938516 MsG0780040965.01.T01:CDS
AAGTTGAAAGAAGGACTTGA+CGG 0.532097 7:+84937152 MsG0780040965.01.T01:CDS
TCCCATTGGAAACCATCAGC+AGG 0.540739 7:-84936763 None:intergenic
AAAAGTCCAATGTACAAAGA+AGG 0.543806 7:+84937114 MsG0780040965.01.T01:CDS
ATTTGTGAGAAAATCAATAC+CGG 0.546496 7:+84936528 MsG0780040965.01.T01:CDS
CAAGAGTAAGTGCATCCCAT+TGG 0.548221 7:-84936777 None:intergenic
GGTCAATACGGCTTAAAGAA+AGG 0.550085 7:+84937030 MsG0780040965.01.T01:CDS
GGGAAGGAAGAATTCTAGAA+GGG 0.551200 7:-84936065 None:intergenic
AGACTGGCTGACTCTTCACT+TGG 0.553007 7:+84936990 MsG0780040965.01.T01:intron
CAAAAGAAAGGAAGGTACTC+AGG 0.556105 7:+84940229 MsG0780040965.01.T01:CDS
GTAGGCCAAGAAGAAGCTGC+AGG 0.556382 7:-84936272 None:intergenic
AGGAATAAGGGTACCTGAAG+GGG 0.561538 7:-84936085 None:intergenic
ATATCATAGGAGGGAAGTAT+GGG 0.564621 7:+84937729 MsG0780040965.01.T01:intron
TTTGCCTCCAAAAGAAAGGA+AGG 0.566764 7:+84940221 MsG0780040965.01.T01:CDS
CACAATGAAGTCGTTTCTGA+AGG 0.570570 7:-84937457 None:intergenic
CGCCAACTCATCAACATCGC+CGG 0.571072 7:-84936547 None:intergenic
GAAAAGTTCAAACCCCAAGC+TGG 0.571259 7:+84937768 MsG0780040965.01.T01:CDS
GCAGGAACAGCTTGGTCATG+AGG 0.572256 7:-84936254 None:intergenic
GAAGAAATAGCAAAGCGAGT+AGG 0.578606 7:+84938433 MsG0780040965.01.T01:CDS
AAGAAGCTGCAGGAACAGCT+TGG 0.580401 7:-84936262 None:intergenic
AGCCATGTACGCAACCTCCT+AGG 0.580915 7:+84940195 MsG0780040965.01.T01:CDS
TTGCTATTTCTTCTTTGGTG+GGG 0.584906 7:-84938423 None:intergenic
GTTGGGTGTGTGTAAGGAGA+GGG 0.590883 7:+84940308 MsG0780040965.01.T01:CDS
CATCAAGTTGTTGACTAACA+AGG 0.596849 7:-84940374 None:intergenic
TAGGAATAAGGGTACCTGAA+GGG 0.599072 7:-84936086 None:intergenic
ATCTTTGTCAGAAATTGGCA+AGG 0.600345 7:+84940284 MsG0780040965.01.T01:CDS
GGAAGAATTCTAGAAGGGAA+TGG 0.601143 7:-84936060 None:intergenic
TCTTGTAAAAGAACGGAGGT+AGG 0.606736 7:-84936317 None:intergenic
TCTGAAGGTCACGACAGCTA+AGG 0.610151 7:-84937442 None:intergenic
ACGATGCTCTTGTAAAAGAA+CGG 0.614648 7:-84936324 None:intergenic
GTGTTGCAAAACAACTAATG+AGG 0.615119 7:+84940172 MsG0780040965.01.T01:CDS
CTAGAAGGGAATGGTGTAGA+CGG 0.615333 7:-84936051 None:intergenic
CTGAACCGGCAACCAGCTTG+GGG 0.623406 7:-84937780 None:intergenic
ATAGGAATAAGGGTACCTGA+AGG 0.624172 7:-84936087 None:intergenic
ACAGCTCGCTCCATCGAAAG+CGG 0.630654 7:-84938502 None:intergenic
TCTTTACACATATGAAGTAG+CGG 0.632505 7:-84936359 None:intergenic
ATAAGGGTACCTGAAGGGGA+AGG 0.633867 7:-84936081 None:intergenic
CTTCAGAAACGACTTCATTG+TGG 0.636469 7:+84937458 MsG0780040965.01.T01:CDS
TAAAGAAGACAAATCACCCC+AGG 0.636708 7:+84936376 MsG0780040965.01.T01:CDS
TCAGTACTTACGCTTACTGG+TGG 0.637515 7:+84937799 MsG0780040965.01.T01:CDS
TGTTGGGTGTGTGTAAGGAG+AGG 0.638170 7:+84940307 MsG0780040965.01.T01:CDS
TTGGAGGCAAAATACCTAGG+AGG 0.638755 7:-84940209 None:intergenic
GGATAAGGCAAACAATAAGG+AGG 0.639166 7:+84937820 MsG0780040965.01.T01:CDS
ACTTTGGCTGAATGGGCAGA+TGG 0.654006 7:+84937413 MsG0780040965.01.T01:CDS
GATAAGGCAAACAATAAGGA+GGG 0.667443 7:+84937821 MsG0780040965.01.T01:CDS
TGAAGGCAACATTAAACACG+AGG 0.685715 7:+84936487 MsG0780040965.01.T01:intron
GAAGGGAATGGTGTAGACGG+AGG 0.686200 7:-84936048 None:intergenic
TTGGAAAGAACAAAATCGTG+AGG 0.689756 7:+84937009 MsG0780040965.01.T01:CDS
ATGCTCTTGTAAAAGAACGG+AGG 0.736774 7:-84936321 None:intergenic
TTGATCAATAGCATACACCA+AGG 0.737692 7:+84940420 MsG0780040965.01.T01:three_prime_UTR
GAAGGCAACATTAAACACGA+GGG 0.746893 7:+84936488 MsG0780040965.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACATGTATTAAATAAAATA+AGG - Chr7:84939890-84939909 None:intergenic 10.0%
!!! TTTAGATTTTTTTTTTTTGA+GGG + Chr7:84940484-84940503 MsG0780040965.01.T01:three_prime_UTR 10.0%
!!! TTTTAGATTTTTTTTTTTTG+AGG + Chr7:84940483-84940502 MsG0780040965.01.T01:three_prime_UTR 10.0%
!! AATATGAATAGATAGAATAA+TGG + Chr7:84939669-84939688 MsG0780040965.01.T01:intron 15.0%
!! ACATACTTAAATATATGATT+TGG - Chr7:84939083-84939102 None:intergenic 15.0%
!! ATCTATTAAAGAAACAAATT+TGG - Chr7:84936667-84936686 None:intergenic 15.0%
!! CATATATATATACATTGTAT+AGG + Chr7:84939115-84939134 MsG0780040965.01.T01:intron 15.0%
!! CTATACAATGTATATATATA+TGG - Chr7:84939117-84939136 None:intergenic 15.0%
!! TTAAAAAGAAATTAATGCAA+TGG - Chr7:84938265-84938284 None:intergenic 15.0%
!!! TCTATATTTTATTTTACTGA+AGG + Chr7:84936470-84936489 MsG0780040965.01.T01:intron 15.0%
!! AAAAAATCGTACATTAAAGA+AGG + Chr7:84938391-84938410 MsG0780040965.01.T01:CDS 20.0%
!! AAAATTGATATTTACGTTGA+AGG - Chr7:84938562-84938581 None:intergenic 20.0%
!! AACAAAAGAAATAGGAATAA+GGG - Chr7:84936100-84936119 None:intergenic 20.0%
!! ACATGTAAGTAAACTATATT+AGG + Chr7:84939903-84939922 MsG0780040965.01.T01:intron 20.0%
!! CAAAACATTTCAATGAAATA+TGG - Chr7:84937284-84937303 None:intergenic 20.0%
!! CAAAATCTTATTATAATTGC+AGG + Chr7:84940110-84940129 MsG0780040965.01.T01:intron 20.0%
!! GATACATTACTTGAAAAATA+AGG + Chr7:84940578-84940597 MsG0780040965.01.T01:three_prime_UTR 20.0%
!! TAACAAAAGAAATAGGAATA+AGG - Chr7:84936101-84936120 None:intergenic 20.0%
!! TGATAACTGTTTAAACATAT+TGG + Chr7:84938738-84938757 MsG0780040965.01.T01:intron 20.0%
!!! ACCATTAAAAAAGAAACTTT+TGG - Chr7:84938875-84938894 None:intergenic 20.0%
!!! ATTCTTTTGGTTTAGTATTT+TGG + Chr7:84939046-84939065 MsG0780040965.01.T01:intron 20.0%
!!! ATTTCATTGAAATGTTTTGT+AGG + Chr7:84937285-84937304 MsG0780040965.01.T01:intron 20.0%
!!! CTGCAATTATAATAAGATTT+TGG - Chr7:84940112-84940131 None:intergenic 20.0%
!!! TAATAAGATTTTGGTCAATT+TGG - Chr7:84940103-84940122 None:intergenic 20.0%
!!! TTCTTTTGGTTTAGTATTTT+GGG + Chr7:84939047-84939066 MsG0780040965.01.T01:intron 20.0%
! AAAACCTCAAGATAAATGTT+TGG + Chr7:84937629-84937648 MsG0780040965.01.T01:intron 25.0%
! AACATACTACCATAAACATA+AGG + Chr7:84938953-84938972 MsG0780040965.01.T01:intron 25.0%
! ACATACTACCATAAACATAA+GGG + Chr7:84938954-84938973 MsG0780040965.01.T01:intron 25.0%
! AGTAATAAAAAGCCAAATCA+AGG - Chr7:84936938-84936957 None:intergenic 25.0%
! AGTTTATATTAGATAAGCCT+GGG + Chr7:84938924-84938943 MsG0780040965.01.T01:intron 25.0%
! ATAAGCATAAACAACATTAC+TGG - Chr7:84936124-84936143 None:intergenic 25.0%
! ATTATTATTGAACTTCTCTG+TGG + Chr7:84939705-84939724 MsG0780040965.01.T01:intron 25.0%
! ATTTGTGAGAAAATCAATAC+CGG + Chr7:84936528-84936547 MsG0780040965.01.T01:CDS 25.0%
! CTAGTTTGATAAAACCTTAA+GGG + Chr7:84937906-84937925 MsG0780040965.01.T01:intron 25.0%
! GAAATAATTTAAACAGCCAT+TGG - Chr7:84937599-84937618 None:intergenic 25.0%
! GCTTATCTAATATAAACTGT+TGG - Chr7:84938922-84938941 None:intergenic 25.0%
! TAAACTAGTTAAACAAAACC+AGG + Chr7:84938993-84939012 MsG0780040965.01.T01:intron 25.0%
! TTACTGGTAACAAAAGAAAT+AGG - Chr7:84936108-84936127 None:intergenic 25.0%
! TTAGAGAAAAAGTTGAAAGA+AGG + Chr7:84937143-84937162 MsG0780040965.01.T01:CDS 25.0%
! TTGAAATACTGAAAAGAGAT+AGG + Chr7:84939425-84939444 MsG0780040965.01.T01:intron 25.0%
! TTTATATAATTGCTCAACCT+TGG - Chr7:84940440-84940459 None:intergenic 25.0%
!! AATAGATAGAATAATGGAGA+TGG + Chr7:84939675-84939694 MsG0780040965.01.T01:intron 25.0%
!! ACTAGTTTGATAAAACCTTA+AGG + Chr7:84937905-84937924 MsG0780040965.01.T01:intron 25.0%
!! ATGTTTTGTAGGTTCAATTA+AGG + Chr7:84937296-84937315 MsG0780040965.01.T01:intron 25.0%
!! ATTTGACTTAATTGTTGAGA+AGG + Chr7:84936206-84936225 MsG0780040965.01.T01:intron 25.0%
!! CTTTAACATTCATTTTCTGA+TGG + Chr7:84937704-84937723 MsG0780040965.01.T01:intron 25.0%
!! TACAATTTTACAATTCCTCT+AGG + Chr7:84939798-84939817 MsG0780040965.01.T01:intron 25.0%
!! TCTTGTAGTCAATTACATTT+TGG - Chr7:84938786-84938805 None:intergenic 25.0%
!! TTTTCTGATGGTAATATCAT+AGG + Chr7:84937716-84937735 MsG0780040965.01.T01:intron 25.0%
!!! AGGTTTTATCAAACTAGTTA+AGG - Chr7:84937903-84937922 None:intergenic 25.0%
!!! ATTGATTTTCTCACAAATTG+AGG - Chr7:84936526-84936545 None:intergenic 25.0%
!!! GCCAAAAGTTTCTTTTTTAA+TGG + Chr7:84938871-84938890 MsG0780040965.01.T01:intron 25.0%
!!! TATATTAGGCCTTGTTTATT+GGG + Chr7:84939917-84939936 MsG0780040965.01.T01:intron 25.0%
!!! TGCAATGGTAGTTATTTTAT+TGG - Chr7:84938250-84938269 None:intergenic 25.0%
!!! TTTCTTTTTTAATGGTGTGA+GGG + Chr7:84938879-84938898 MsG0780040965.01.T01:intron 25.0%
AAAAGTCCAATGTACAAAGA+AGG + Chr7:84937114-84937133 MsG0780040965.01.T01:CDS 30.0%
AAACCTACTAAATATGCATG+TGG + Chr7:84939214-84939233 MsG0780040965.01.T01:intron 30.0%
AAGAAACGTGAGAAGTAAAT+GGG + Chr7:84938159-84938178 MsG0780040965.01.T01:intron 30.0%
AAGAGAGTGGATCAAATATA+GGG + Chr7:84939561-84939580 MsG0780040965.01.T01:intron 30.0%
AAGCTTGTGAAATATGATGT+TGG + Chr7:84939143-84939162 MsG0780040965.01.T01:intron 30.0%
ACAAGTATTAAGTTCTGTTG+TGG + Chr7:84938822-84938841 MsG0780040965.01.T01:intron 30.0%
ACATTGCTAAATATTACCAG+GGG + Chr7:84937531-84937550 MsG0780040965.01.T01:intron 30.0%
AGAAAGTAAACAAACCCTTA+AGG - Chr7:84937923-84937942 None:intergenic 30.0%
AGTTAAGGAAATGAACAGAT+TGG - Chr7:84937888-84937907 None:intergenic 30.0%
ATACTTGTGCAAATTTGAGA+TGG - Chr7:84938810-84938829 None:intergenic 30.0%
ATGATGATTCACTATCTCTT+GGG + Chr7:84936881-84936900 MsG0780040965.01.T01:CDS 30.0%
CAATTGTGATAGAGAAAAGA+TGG + Chr7:84938027-84938046 MsG0780040965.01.T01:intron 30.0%
CACATTGCTAAATATTACCA+GGG + Chr7:84937530-84937549 MsG0780040965.01.T01:intron 30.0%
CAGTTTATATTAGATAAGCC+TGG + Chr7:84938923-84938942 MsG0780040965.01.T01:intron 30.0%
CATAATGTGTTATATGCAAC+AGG + Chr7:84937331-84937350 MsG0780040965.01.T01:intron 30.0%
CTAAAATTTACGATTCAGAC+TGG + Chr7:84936974-84936993 MsG0780040965.01.T01:intron 30.0%
CTGTTGCATATAACACATTA+TGG - Chr7:84937333-84937352 None:intergenic 30.0%
CTTCAAAATGAGAAAAGCTT+AGG - Chr7:84938186-84938205 None:intergenic 30.0%
GAGAAATCTTTGTCAGAAAT+TGG + Chr7:84940279-84940298 MsG0780040965.01.T01:CDS 30.0%
GATAAATGTTTGGCTAAAGT+TGG + Chr7:84937639-84937658 MsG0780040965.01.T01:intron 30.0%
GTATATTGTCTACTTCAGAT+TGG + Chr7:84936690-84936709 MsG0780040965.01.T01:intron 30.0%
TAAGAGAGTGGATCAAATAT+AGG + Chr7:84939560-84939579 MsG0780040965.01.T01:intron 30.0%
TCAATTCTGTAATAAGAGAG+TGG + Chr7:84939548-84939567 MsG0780040965.01.T01:intron 30.0%
TCAATTGATTGCTCAAATAC+AGG + Chr7:84937244-84937263 MsG0780040965.01.T01:CDS 30.0%
TCACATTGCTAAATATTACC+AGG + Chr7:84937529-84937548 MsG0780040965.01.T01:intron 30.0%
TCTTTACACATATGAAGTAG+CGG - Chr7:84936362-84936381 None:intergenic 30.0%
TGTTTATGTTGGATTACCTT+GGG - Chr7:84939844-84939863 None:intergenic 30.0%
TTAATTTATGCCTGTATGTG+AGG - Chr7:84940015-84940034 None:intergenic 30.0%
TTAGCCAAACATTTATCTTG+AGG - Chr7:84937636-84937655 None:intergenic 30.0%
TTCTCCTGAAAATAATATGC+TGG - Chr7:84938338-84938357 None:intergenic 30.0%
TTGTTTATGTTGGATTACCT+TGG - Chr7:84939845-84939864 None:intergenic 30.0%
! ATCAAACTTCAGTCTCATTT+TGG + Chr7:84937380-84937399 MsG0780040965.01.T01:CDS 30.0%
! ATTTAGTCTAGTTTAACCTG+AGG - Chr7:84939186-84939205 None:intergenic 30.0%
! ATTTTGTTCCTTACAGAAGT+TGG + Chr7:84939266-84939285 MsG0780040965.01.T01:intron 30.0%
! CAGTCTGAATCGTAAATTTT+AGG - Chr7:84936976-84936995 None:intergenic 30.0%
! CTAAGATTTGGTATTGAAGA+TGG + Chr7:84940252-84940271 MsG0780040965.01.T01:CDS 30.0%
! GGTTTCATTCATCATTCTTT+TGG + Chr7:84939033-84939052 MsG0780040965.01.T01:intron 30.0%
! TCTAGCTTAATGGTTAACTT+TGG + Chr7:84936909-84936928 MsG0780040965.01.T01:intron 30.0%
! TCTATGTTTGTTAGTTGAAG+AGG + Chr7:84938126-84938145 MsG0780040965.01.T01:intron 30.0%
!! CGTTTTAAATTGCTAGGAAA+GGG + Chr7:84937982-84938001 MsG0780040965.01.T01:intron 30.0%
!! CTATATTAGGCCTTGTTTAT+TGG + Chr7:84939916-84939935 MsG0780040965.01.T01:intron 30.0%
!! GTACATTGGACTTTTTAGTA+AGG - Chr7:84937109-84937128 None:intergenic 30.0%
!! TATGATGTTGGTCTTGTTTA+AGG + Chr7:84939155-84939174 MsG0780040965.01.T01:intron 30.0%
!! TCGATTCTATTTCTGTAACA+TGG + Chr7:84938310-84938329 MsG0780040965.01.T01:intron 30.0%
!! TCGTTTTAAATTGCTAGGAA+AGG + Chr7:84937981-84938000 MsG0780040965.01.T01:intron 30.0%
!! TGTGTTCGTTTTAAATTGCT+AGG + Chr7:84937976-84937995 MsG0780040965.01.T01:intron 30.0%
!! TTTGCTATTTCTTCTTTGGT+GGG - Chr7:84938427-84938446 None:intergenic 30.0%
!!! AATGAACAGATTGGTTTTAC+CGG - Chr7:84937879-84937898 None:intergenic 30.0%
!!! GTTTCTTTTTTAATGGTGTG+AGG + Chr7:84938878-84938897 MsG0780040965.01.T01:intron 30.0%
!!! TGTTTTGGAATGCAGAAATA+AGG - Chr7:84937847-84937866 None:intergenic 30.0%
AAGTTGAAAGAAGGACTTGA+CGG + Chr7:84937152-84937171 MsG0780040965.01.T01:CDS 35.0%
AATATCATAGGAGGGAAGTA+TGG + Chr7:84937728-84937747 MsG0780040965.01.T01:intron 35.0%
ACAAAATCGTGAGGTCAATA+CGG + Chr7:84937018-84937037 MsG0780040965.01.T01:CDS 35.0%
ACGACAAAAATAACTGAACC+TGG - Chr7:84936397-84936416 None:intergenic 35.0%
ACGATGCTCTTGTAAAAGAA+CGG - Chr7:84936327-84936346 None:intergenic 35.0%
ACGTAACCTTCTTTGTACAT+TGG - Chr7:84937123-84937142 None:intergenic 35.0%
ACTAGTTAAACAAAACCAGG+TGG + Chr7:84938996-84939015 MsG0780040965.01.T01:intron 35.0%
AGATATATTCATGCTAGAGC+GGG + Chr7:84939948-84939967 MsG0780040965.01.T01:intron 35.0%
AGCATGAATATATCTCTAGC+AGG - Chr7:84939943-84939962 None:intergenic 35.0%
AGGAATTACAGTAGATAGGT+TGG + Chr7:84938453-84938472 MsG0780040965.01.T01:CDS 35.0%
AGGCATGGAATTGTTGTATA+TGG + Chr7:84938220-84938239 MsG0780040965.01.T01:intron 35.0%
ATCAGTGCAAGCAAAAAACT+CGG - Chr7:84938722-84938741 None:intergenic 35.0%
ATCTTTGTCAGAAATTGGCA+AGG + Chr7:84940284-84940303 MsG0780040965.01.T01:CDS 35.0%
ATTGCAACATTAGAGAGAGT+CGG + Chr7:84939455-84939474 MsG0780040965.01.T01:intron 35.0%
ATTTAGCAATGTGAACTACC+AGG - Chr7:84937523-84937542 None:intergenic 35.0%
CAAATGATCCAACTTCTGTA+AGG - Chr7:84939277-84939296 None:intergenic 35.0%
CAAGAAACGTGAGAAGTAAA+TGG + Chr7:84938158-84938177 MsG0780040965.01.T01:intron 35.0%
CGACAAAAATAACTGAACCT+GGG - Chr7:84936396-84936415 None:intergenic 35.0%
CTGATGGTAATATCATAGGA+GGG + Chr7:84937720-84937739 MsG0780040965.01.T01:intron 35.0%
GACAAAAATAACTGAACCTG+GGG - Chr7:84936395-84936414 None:intergenic 35.0%
GACCAAGAAAAGCTAACTAT+TGG + Chr7:84939608-84939627 MsG0780040965.01.T01:intron 35.0%
GACGAACATTTACTACGATT+CGG - Chr7:84939868-84939887 None:intergenic 35.0%
GAGATATATTCATGCTAGAG+CGG + Chr7:84939947-84939966 MsG0780040965.01.T01:intron 35.0%
GAGTAGGAATTACAGTAGAT+AGG + Chr7:84938449-84938468 MsG0780040965.01.T01:CDS 35.0%
GATAAGGCAAACAATAAGGA+GGG + Chr7:84937821-84937840 MsG0780040965.01.T01:CDS 35.0%
GATGATGATTCACTATCTCT+TGG + Chr7:84936880-84936899 MsG0780040965.01.T01:CDS 35.0%
GCTTGATACCCTTATGTTTA+TGG - Chr7:84938965-84938984 None:intergenic 35.0%
GTGTTGCAAAACAACTAATG+AGG + Chr7:84940172-84940191 MsG0780040965.01.T01:CDS 35.0%
TAACTTTGGCATCCTTGATT+TGG + Chr7:84936923-84936942 MsG0780040965.01.T01:intron 35.0%
TACTGTGCAGAAAAACTAGT+AGG - Chr7:84936293-84936312 None:intergenic 35.0%
TAGTAAGTGATATCGTTGCA+GGG - Chr7:84938586-84938605 None:intergenic 35.0%
TCTGATGGTAATATCATAGG+AGG + Chr7:84937719-84937738 MsG0780040965.01.T01:intron 35.0%
TGTGATAGAGAAAAGATGGA+AGG + Chr7:84938031-84938050 MsG0780040965.01.T01:intron 35.0%
TGTTAATATGCACCTCTTGA+TGG + Chr7:84939307-84939326 MsG0780040965.01.T01:intron 35.0%
TTAAACAAAACCAGGTGGTT+TGG + Chr7:84939001-84939020 MsG0780040965.01.T01:intron 35.0%
TTAAGTTCTGTTGTGGATGA+TGG + Chr7:84938829-84938848 MsG0780040965.01.T01:intron 35.0%
TTGATCAATAGCATACACCA+AGG + Chr7:84940420-84940439 MsG0780040965.01.T01:three_prime_UTR 35.0%
TTGGAAAGAACAAAATCGTG+AGG + Chr7:84937009-84937028 MsG0780040965.01.T01:CDS 35.0%
! AACTTCAGTCTCATTTTGGA+AGG + Chr7:84937384-84937403 MsG0780040965.01.T01:CDS 35.0%
! ATATCATAGGAGGGAAGTAT+GGG + Chr7:84937729-84937748 MsG0780040965.01.T01:intron 35.0%
! ATCAAGAGGTGCATATTAAC+AGG - Chr7:84939308-84939327 None:intergenic 35.0%
! CATCAAGTTGTTGACTAACA+AGG - Chr7:84940377-84940396 None:intergenic 35.0%
! GAGAATTTCTATGCCCTTTT+GGG + Chr7:84938353-84938372 MsG0780040965.01.T01:intron 35.0%
! GGTACCAGCATATTATTTTC+AGG + Chr7:84938331-84938350 MsG0780040965.01.T01:intron 35.0%
! GTATTTTGCCTCCAAAAGAA+AGG + Chr7:84940217-84940236 MsG0780040965.01.T01:CDS 35.0%
! GTTTTGCAACACATACAGTT+GGG - Chr7:84940164-84940183 None:intergenic 35.0%
! TCTTGCTATGTCTAACGATT+GGG - Chr7:84939590-84939609 None:intergenic 35.0%
! TGTTTTGCAACACATACAGT+TGG - Chr7:84940165-84940184 None:intergenic 35.0%
!! ACTTCAGTCTCATTTTGGAA+GGG + Chr7:84937385-84937404 MsG0780040965.01.T01:CDS 35.0%
!! CATTGAGTTTACTTTTGTGC+TGG - Chr7:84939376-84939395 None:intergenic 35.0%
!! CTCAAAAGTTGCTTTGTTTC+AGG - Chr7:84937209-84937228 None:intergenic 35.0%
!! CTTTGCTATTTCTTCTTTGG+TGG - Chr7:84938428-84938447 None:intergenic 35.0%
!! TACGATTCGGTTGTTTATGT+TGG - Chr7:84939855-84939874 None:intergenic 35.0%
!! TCGCTTTGCTATTTCTTCTT+TGG - Chr7:84938431-84938450 None:intergenic 35.0%
!! TTGCTATTTCTTCTTTGGTG+GGG - Chr7:84938426-84938445 None:intergenic 35.0%
!! TTGGGTTAGTTCTAGCTTAA+TGG + Chr7:84936899-84936918 MsG0780040965.01.T01:intron 35.0%
!!! CATTTTGAAGTGTGGATTGT+CGG + Chr7:84938196-84938215 MsG0780040965.01.T01:intron 35.0%
!!! CTCCAATAGTTAGCTTTTCT+TGG - Chr7:84939613-84939632 None:intergenic 35.0%
!!! GCTTTTCTCATTTTGAAGTG+TGG + Chr7:84938188-84938207 MsG0780040965.01.T01:intron 35.0%
AAAACAGGCATACCATCAAG+AGG - Chr7:84939322-84939341 None:intergenic 40.0%
AAAGTTGGAACTGCAGTTGT+AGG + Chr7:84937654-84937673 MsG0780040965.01.T01:intron 40.0%
AACAGAGTGGTTACACAACA+GGG + Chr7:84939738-84939757 MsG0780040965.01.T01:intron 40.0%
AATATGCATGTGGCAGTGAT+TGG + Chr7:84939224-84939243 MsG0780040965.01.T01:intron 40.0%
AATCTCGACTTAGGTGGTTT+GGG + Chr7:84939507-84939526 MsG0780040965.01.T01:intron 40.0%
ACATTAAACACGAGGGTAAC+AGG + Chr7:84936495-84936514 MsG0780040965.01.T01:CDS 40.0%
AGATGCTTGAATCTCGACTT+AGG + Chr7:84939498-84939517 MsG0780040965.01.T01:intron 40.0%
AGTGGCTGAAGAGTTGAAAT+TGG + Chr7:84936837-84936856 MsG0780040965.01.T01:CDS 40.0%
ATACCTGCAATAAGTCCTGA+AGG - Chr7:84937568-84937587 None:intergenic 40.0%
ATGCTCTTGTAAAAGAACGG+AGG - Chr7:84936324-84936343 None:intergenic 40.0%
CAAATCAAAACCAAACCACC+TGG - Chr7:84939014-84939033 None:intergenic 40.0%
CACAATGAAGTCGTTTCTGA+AGG - Chr7:84937460-84937479 None:intergenic 40.0%
CTAGTAAGTGATATCGTTGC+AGG - Chr7:84938587-84938606 None:intergenic 40.0%
CTGCCACATGCATATTTAGT+AGG - Chr7:84939220-84939239 None:intergenic 40.0%
CTTCAGAAACGACTTCATTG+TGG + Chr7:84937458-84937477 MsG0780040965.01.T01:CDS 40.0%
GAAGAAACGAAATCCTCTTC+CGG - Chr7:84936724-84936743 None:intergenic 40.0%
GAAGAAATAGCAAAGCGAGT+AGG + Chr7:84938433-84938452 MsG0780040965.01.T01:CDS 40.0%
GAAGGCAACATTAAACACGA+GGG + Chr7:84936488-84936507 MsG0780040965.01.T01:intron 40.0%
GGATAAGGCAAACAATAAGG+AGG + Chr7:84937820-84937839 MsG0780040965.01.T01:CDS 40.0%
GGTCAATACGGCTTAAAGAA+AGG + Chr7:84937030-84937049 MsG0780040965.01.T01:CDS 40.0%
GGTGGATAAGGCAAACAATA+AGG + Chr7:84937817-84937836 MsG0780040965.01.T01:CDS 40.0%
TAAAGAAGACAAATCACCCC+AGG + Chr7:84936376-84936395 MsG0780040965.01.T01:CDS 40.0%
TCTTGTAAAAGAACGGAGGT+AGG - Chr7:84936320-84936339 None:intergenic 40.0%
TGAAGGCAACATTAAACACG+AGG + Chr7:84936487-84936506 MsG0780040965.01.T01:intron 40.0%
TTCCAAAACAATTCGTCTGC+CGG + Chr7:84937857-84937876 MsG0780040965.01.T01:CDS 40.0%
TTGCAACATTAGAGAGAGTC+GGG + Chr7:84939456-84939475 MsG0780040965.01.T01:intron 40.0%
TTTATGCCTGTATGTGAGGT+CGG - Chr7:84940011-84940030 None:intergenic 40.0%
TTTGCCTCCAAAAGAAAGGA+AGG + Chr7:84940221-84940240 MsG0780040965.01.T01:CDS 40.0%
! AAGGTACTCAGGCTAAGATT+TGG + Chr7:84940240-84940259 MsG0780040965.01.T01:CDS 40.0%
! ACTTTTCGACACTCCTCATA+AGG - Chr7:84937755-84937774 None:intergenic 40.0%
! AGTACCTTCCTTTCTTTTGG+AGG - Chr7:84940228-84940247 None:intergenic 40.0%
! CTGAGTACCTTCCTTTCTTT+TGG - Chr7:84940231-84940250 None:intergenic 40.0%
! CTTGTTTAAGGTTGATCCTC+AGG + Chr7:84939167-84939186 MsG0780040965.01.T01:intron 40.0%
! GGAAGAATTCTAGAAGGGAA+TGG - Chr7:84936063-84936082 None:intergenic 40.0%
! GGAGAATTTCTATGCCCTTT+TGG + Chr7:84938352-84938371 MsG0780040965.01.T01:intron 40.0%
! GGGAAGGAAGAATTCTAGAA+GGG - Chr7:84936068-84936087 None:intergenic 40.0%
! GTCTTGCTATGTCTAACGAT+TGG - Chr7:84939591-84939610 None:intergenic 40.0%
! TCAGAAATTGGCAAGGTGTT+GGG + Chr7:84940291-84940310 MsG0780040965.01.T01:CDS 40.0%
! TTCAACTCCCCATTTTGTAC+TGG + Chr7:84938677-84938696 MsG0780040965.01.T01:intron 40.0%
!! AAGAGCATCGTGATGAGTAT+AGG + Chr7:84936336-84936355 MsG0780040965.01.T01:CDS 40.0%
!! AGTAAGCGTAAGTACTGAAC+CGG - Chr7:84937797-84937816 None:intergenic 40.0%
!! ATAGGAATAAGGGTACCTGA+AGG - Chr7:84936090-84936109 None:intergenic 40.0%
!! CAAAAGAAAGGAAGGTACTC+AGG + Chr7:84940229-84940248 MsG0780040965.01.T01:CDS 40.0%
!! CTTTTGGAGGCAAAATACCT+AGG - Chr7:84940215-84940234 None:intergenic 40.0%
!! TAGGAATAAGGGTACCTGAA+GGG - Chr7:84936089-84936108 None:intergenic 40.0%
!! TGTATGATGGGTGTATGACA+CGG + Chr7:84939971-84939990 MsG0780040965.01.T01:intron 40.0%
!! TTTTGGAAGGGAACCAACTT+TGG + Chr7:84937397-84937416 MsG0780040965.01.T01:CDS 40.0%
!!! ATGCCTGTTTTTGCAAGTGA+CGG + Chr7:84939331-84939350 MsG0780040965.01.T01:intron 40.0%
!!! CAGGTGGTTTGGTTTTGATT+TGG + Chr7:84939012-84939031 MsG0780040965.01.T01:intron 40.0%
ACAGAGTGGTTACACAACAG+GGG + Chr7:84939739-84939758 MsG0780040965.01.T01:intron 45.0%
ACTCCGTCACTTGCAAAAAC+AGG - Chr7:84939337-84939356 None:intergenic 45.0%
AGAATTCTTCCTTCCCCTTC+AGG + Chr7:84936072-84936091 MsG0780040965.01.T01:CDS 45.0%
ATGCTCTGCGCTTGTTCTTA+TGG + Chr7:84937180-84937199 MsG0780040965.01.T01:CDS 45.0%
CAACAGAGTGGTTACACAAC+AGG + Chr7:84939737-84939756 MsG0780040965.01.T01:intron 45.0%
CAAGAGTAAGTGCATCCCAT+TGG - Chr7:84936780-84936799 None:intergenic 45.0%
CCACTCACCAGTACAAAATG+GGG - Chr7:84938687-84938706 None:intergenic 45.0%
CTAGAAGGGAATGGTGTAGA+CGG - Chr7:84936054-84936073 None:intergenic 45.0%
CTAGGCTCTCTAATTCCTAG+AGG - Chr7:84939816-84939835 None:intergenic 45.0%
CTGTTGTGTAACCACTCTGT+TGG - Chr7:84939739-84939758 None:intergenic 45.0%
GAAAAGTTCAAACCCCAAGC+TGG + Chr7:84937768-84937787 MsG0780040965.01.T01:CDS 45.0%
GAATCTCGACTTAGGTGGTT+TGG + Chr7:84939506-84939525 MsG0780040965.01.T01:intron 45.0%
GCCACTCACCAGTACAAAAT+GGG - Chr7:84938688-84938707 None:intergenic 45.0%
GGAACCAACTTTGGCTGAAT+GGG + Chr7:84937406-84937425 MsG0780040965.01.T01:CDS 45.0%
GGGGAAGGAAGAATTCTAGA+AGG - Chr7:84936069-84936088 None:intergenic 45.0%
GGTAGTATGTTATGCTTCCC+AGG - Chr7:84938944-84938963 None:intergenic 45.0%
GGTTCAGTACTTACGCTTAC+TGG + Chr7:84937796-84937815 MsG0780040965.01.T01:CDS 45.0%
GTATGCAGCAGTTGCATCTT+CGG + Chr7:84936577-84936596 MsG0780040965.01.T01:CDS 45.0%
GTCAGAAATTGGCAAGGTGT+TGG + Chr7:84940290-84940309 MsG0780040965.01.T01:CDS 45.0%
TAAGGAGAGGGTCAGACAAT+TGG + Chr7:84940320-84940339 MsG0780040965.01.T01:CDS 45.0%
TACAAGAACTCCGCTTTCGA+TGG + Chr7:84938492-84938511 MsG0780040965.01.T01:CDS 45.0%
TCAGTACTTACGCTTACTGG+TGG + Chr7:84937799-84937818 MsG0780040965.01.T01:CDS 45.0%
TCTAGCAGGCCCAATAAACA+AGG - Chr7:84939929-84939948 None:intergenic 45.0%
TGCAACATTAGAGAGAGTCG+GGG + Chr7:84939457-84939476 MsG0780040965.01.T01:intron 45.0%
TGCTTGAATCTCGACTTAGG+TGG + Chr7:84939501-84939520 MsG0780040965.01.T01:intron 45.0%
TGGATAACTGTCCAACAGAG+TGG + Chr7:84939725-84939744 MsG0780040965.01.T01:intron 45.0%
TTCCGCAATCTTGCCCAAAA+GGG - Chr7:84938369-84938388 None:intergenic 45.0%
TTGGAGGCAAAATACCTAGG+AGG - Chr7:84940212-84940231 None:intergenic 45.0%
! CTTACGCTTACTGGTGGATA+AGG + Chr7:84937805-84937824 MsG0780040965.01.T01:CDS 45.0%
! TACCGGCAGACGAATTGTTT+TGG - Chr7:84937862-84937881 None:intergenic 45.0%
! TTGAAGTGTGGATTGTCGGT+AGG + Chr7:84938200-84938219 MsG0780040965.01.T01:intron 45.0%
! TTTGCAAGTGACGGAGTGTT+GGG + Chr7:84939340-84939359 MsG0780040965.01.T01:intron 45.0%
!! AGGAATAAGGGTACCTGAAG+GGG - Chr7:84936088-84936107 None:intergenic 45.0%
!! TTTTGCAAGTGACGGAGTGT+TGG + Chr7:84939339-84939358 MsG0780040965.01.T01:intron 45.0%
AAGAAGCTGCAGGAACAGCT+TGG - Chr7:84936265-84936284 None:intergenic 50.0%
ACTTTGGCTGAATGGGCAGA+TGG + Chr7:84937413-84937432 MsG0780040965.01.T01:CDS 50.0%
AGACTCGGACACAACTTTCC+AGG + Chr7:84938531-84938550 MsG0780040965.01.T01:CDS 50.0%
ATGCTAGAGCGGGTGTATGA+TGG + Chr7:84939958-84939977 MsG0780040965.01.T01:intron 50.0%
CGCCACTCACCAGTACAAAA+TGG - Chr7:84938689-84938708 None:intergenic 50.0%
CGGACACAACTTTCCAGGTA+GGG + Chr7:84938536-84938555 MsG0780040965.01.T01:intron 50.0%
CTCAAAACAAGCTGCTGCAG+TGG + Chr7:84936819-84936838 MsG0780040965.01.T01:CDS 50.0%
CTGCCTTCAGGACTTATTGC+AGG + Chr7:84937562-84937581 MsG0780040965.01.T01:intron 50.0%
CTGTAACCGACCTCACATAC+AGG + Chr7:84940002-84940021 MsG0780040965.01.T01:intron 50.0%
CTGTTCCTGCAGCTTCTTCT+TGG + Chr7:84936267-84936286 MsG0780040965.01.T01:CDS 50.0%
CTTCCGCAATCTTGCCCAAA+AGG - Chr7:84938370-84938389 None:intergenic 50.0%
GATTCATGCCAACTTACGCC+TGG + Chr7:84937502-84937521 MsG0780040965.01.T01:intron 50.0%
GCCTGCTGATGGTTTCCAAT+GGG + Chr7:84936762-84936781 MsG0780040965.01.T01:CDS 50.0%
GCTAAATATTACCAGGGGCG+TGG + Chr7:84937536-84937555 MsG0780040965.01.T01:intron 50.0%
GGATTACCTTGGGAGAGACT+AGG - Chr7:84939834-84939853 None:intergenic 50.0%
GGGAACCAACTTTGGCTGAA+TGG + Chr7:84937405-84937424 MsG0780040965.01.T01:CDS 50.0%
GTGAACTACCAGGCGTAAGT+TGG - Chr7:84937513-84937532 None:intergenic 50.0%
GTTGGGTGTGTGTAAGGAGA+GGG + Chr7:84940308-84940327 MsG0780040965.01.T01:CDS 50.0%
TACCTAGGAGGTTGCGTACA+TGG - Chr7:84940200-84940219 None:intergenic 50.0%
TCAACTATGCTGCCTGCTGA+TGG + Chr7:84936751-84936770 MsG0780040965.01.T01:CDS 50.0%
TCCCATTGGAAACCATCAGC+AGG - Chr7:84936766-84936785 None:intergenic 50.0%
TCGGACACAACTTTCCAGGT+AGG + Chr7:84938535-84938554 MsG0780040965.01.T01:intron 50.0%
TCTGAAGGTCACGACAGCTA+AGG - Chr7:84937445-84937464 None:intergenic 50.0%
TCTGCCCATTCAGCCAAAGT+TGG - Chr7:84937413-84937432 None:intergenic 50.0%
TGCCTGCTGATGGTTTCCAA+TGG + Chr7:84936761-84936780 MsG0780040965.01.T01:CDS 50.0%
TGCTAGAGCGGGTGTATGAT+GGG + Chr7:84939959-84939978 MsG0780040965.01.T01:intron 50.0%
TGTTGGGTGTGTGTAAGGAG+AGG + Chr7:84940307-84940326 MsG0780040965.01.T01:CDS 50.0%
TTCGATGGAGCGAGCTGTAT+GGG + Chr7:84938507-84938526 MsG0780040965.01.T01:CDS 50.0%
TTTACGTTGAAGGCCCTACC+TGG - Chr7:84938552-84938571 None:intergenic 50.0%
TTTCGATGGAGCGAGCTGTA+TGG + Chr7:84938506-84938525 MsG0780040965.01.T01:CDS 50.0%
! AGACTGGCTGACTCTTCACT+TGG + Chr7:84936990-84937009 MsG0780040965.01.T01:intron 50.0%
! AGGGAAGTATGGGCCTTATG+AGG + Chr7:84937739-84937758 MsG0780040965.01.T01:CDS 50.0%
! GCAGGTATCGTCACTACCAA+TGG + Chr7:84937580-84937599 MsG0780040965.01.T01:intron 50.0%
! GCTTGAGCTTGTTCAACGCT+TGG - Chr7:84940350-84940369 None:intergenic 50.0%
! TACCGGCGATGTTGATGAGT+TGG + Chr7:84936545-84936564 MsG0780040965.01.T01:CDS 50.0%
! TGCCCTTTTGGGCAAGATTG+CGG + Chr7:84938364-84938383 MsG0780040965.01.T01:intron 50.0%
!! ATAAGGGTACCTGAAGGGGA+AGG - Chr7:84936084-84936103 None:intergenic 50.0%
!! CAAGGTGTTGGGTGTGTGTA+AGG + Chr7:84940302-84940321 MsG0780040965.01.T01:CDS 50.0%
!! CCCCATTTTGTACTGGTGAG+TGG + Chr7:84938684-84938703 MsG0780040965.01.T01:intron 50.0%
!! CTTCAGATTGGCTTCTTCGC+CGG + Chr7:84936702-84936721 MsG0780040965.01.T01:intron 50.0%
!!! CACTGCAGCAGCTTGTTTTG+AGG - Chr7:84936821-84936840 None:intergenic 50.0%
ACAGCTCGCTCCATCGAAAG+CGG - Chr7:84938505-84938524 None:intergenic 55.0%
ACTGAACCGGCAACCAGCTT+GGG - Chr7:84937784-84937803 None:intergenic 55.0%
AGAGAGCCTAGTCTCTCCCA+AGG + Chr7:84939825-84939844 MsG0780040965.01.T01:intron 55.0%
AGCCATGTACGCAACCTCCT+AGG + Chr7:84940195-84940214 MsG0780040965.01.T01:CDS 55.0%
CGCCAACTCATCAACATCGC+CGG - Chr7:84936550-84936569 None:intergenic 55.0%
GAAGGGAATGGTGTAGACGG+AGG - Chr7:84936051-84936070 None:intergenic 55.0%
GCAGGAACAGCTTGGTCATG+AGG - Chr7:84936257-84936276 None:intergenic 55.0%
GCTGAATGGGCAGATGGTGT+GGG + Chr7:84937419-84937438 MsG0780040965.01.T01:CDS 55.0%
GTAGGCCAAGAAGAAGCTGC+AGG - Chr7:84936275-84936294 None:intergenic 55.0%
TACTGAACCGGCAACCAGCT+TGG - Chr7:84937785-84937804 None:intergenic 55.0%
TCAAACCCCAAGCTGGTTGC+CGG + Chr7:84937775-84937794 MsG0780040965.01.T01:CDS 55.0%
! ATTGGCTTCTTCGCCGGAAG+AGG + Chr7:84936708-84936727 MsG0780040965.01.T01:CDS 55.0%
! GTGTGGATTGTCGGTAGGCA+TGG + Chr7:84938205-84938224 MsG0780040965.01.T01:intron 55.0%
CTGAACCGGCAACCAGCTTG+GGG - Chr7:84937783-84937802 None:intergenic 60.0%
GCGAGCTGTATGGGCAGACT+CGG + Chr7:84938516-84938535 MsG0780040965.01.T01:CDS 60.0%
GGCTGAATGGGCAGATGGTG+TGG + Chr7:84937418-84937437 MsG0780040965.01.T01:CDS 60.0%
GAAGGCAGAGACCACGCCCC+TGG - Chr7:84937550-84937569 None:intergenic 70.0%
GGGGCGTGGTCTCTGCCTTC+AGG + Chr7:84937550-84937569 MsG0780040965.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 84936039 84940632 84936039 ID=MsG0780040965.01;Name=MsG0780040965.01
Chr7 mRNA 84936039 84940632 84936039 ID=MsG0780040965.01.T01;Parent=MsG0780040965.01;Name=MsG0780040965.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0.62|0.66|1|1|1|9|213|519
Chr7 exon 84936039 84936123 84936039 ID=MsG0780040965.01.T01:exon:40894;Parent=MsG0780040965.01.T01
Chr7 exon 84936246 84936397 84936246 ID=MsG0780040965.01.T01:exon:40895;Parent=MsG0780040965.01.T01
Chr7 exon 84936492 84936616 84936492 ID=MsG0780040965.01.T01:exon:40896;Parent=MsG0780040965.01.T01
Chr7 exon 84936708 84936902 84936708 ID=MsG0780040965.01.T01:exon:40897;Parent=MsG0780040965.01.T01
Chr7 exon 84936992 84937265 84936992 ID=MsG0780040965.01.T01:exon:40898;Parent=MsG0780040965.01.T01
Chr7 exon 84937353 84937479 84937353 ID=MsG0780040965.01.T01:exon:40899;Parent=MsG0780040965.01.T01
Chr7 exon 84937738 84937878 84937738 ID=MsG0780040965.01.T01:exon:40900;Parent=MsG0780040965.01.T01
Chr7 exon 84938380 84938552 84938380 ID=MsG0780040965.01.T01:exon:40901;Parent=MsG0780040965.01.T01
Chr7 exon 84940132 84940632 84940132 ID=MsG0780040965.01.T01:exon:40902;Parent=MsG0780040965.01.T01
Chr7 CDS 84936039 84936123 84936039 ID=MsG0780040965.01.T01:cds;Parent=MsG0780040965.01.T01
Chr7 CDS 84936246 84936397 84936246 ID=MsG0780040965.01.T01:cds;Parent=MsG0780040965.01.T01
Chr7 CDS 84936492 84936616 84936492 ID=MsG0780040965.01.T01:cds;Parent=MsG0780040965.01.T01
Chr7 CDS 84936708 84936902 84936708 ID=MsG0780040965.01.T01:cds;Parent=MsG0780040965.01.T01
Chr7 CDS 84936992 84937265 84936992 ID=MsG0780040965.01.T01:cds;Parent=MsG0780040965.01.T01
Chr7 CDS 84937353 84937479 84937353 ID=MsG0780040965.01.T01:cds;Parent=MsG0780040965.01.T01
Chr7 CDS 84937738 84937878 84937738 ID=MsG0780040965.01.T01:cds;Parent=MsG0780040965.01.T01
Chr7 CDS 84938380 84938552 84938380 ID=MsG0780040965.01.T01:cds;Parent=MsG0780040965.01.T01
Chr7 CDS 84940132 84940419 84940132 ID=MsG0780040965.01.T01:cds;Parent=MsG0780040965.01.T01
Chr7 three_prime_UTR 84940420 84940632 84940420 ID=MsG0780040965.01.T01:three_prime_utr;Parent=MsG0780040965.01.T01
Gene Sequence

>MsG0780040965.01.T01

ATGTTTTCTCCTCCGTCTACACCATTCCCTTCTAGAATTCTTCCTTCCCCTTCAGGTACCCTTATTCCTATTTCTTTTGTTACCATTATGATGCCTCATGACCAAGCTGTTCCTGCAGCTTCTTCTTGGCCTACTAGTTTTTCTGCACAGTATTTTCCTACCTCCGTTCTTTTACAAGAGCATCGTGATGAGTATAGGCCGCTACTTCATATGTGTAAAGAAGACAAATCACCCCAGGCAACATTAAACACGAGGGTAACAGGTGTGACCTCAATTTGTGAGAAAATCAATACCGGCGATGTTGATGAGTTGGCGCATAACTGTATGCAGCAGTTGCATCTTCGGTGTCATTTACAAAACTTATTGGCTTCTTCGCCGGAAGAGGATTTCGTTTCTTCTTCTTCTTCAACTATGCTGCCTGCTGATGGTTTCCAATGGGATGCACTTACTCTTGCTAAGCAAGCTCTATCAGCCTCAAAACAAGCTGCTGCAGTGGCTGAAGAGTTGAAATTGGTTAAAGTTGACGATGATAATGATGATGATTCACTATCTCTTGGACTGGCTGACTCTTCACTTGGAAAGAACAAAATCGTGAGGTCAATACGGCTTAAAGAAAGGCGATCTAAACAGAGAAAAGTGTCTAACTCAAAAGTTCTTGATGACGAAATGTACCTTACTAAAAAGTCCAATGTACAAAGAAGGTTACGTTTAGAGAAAAAGTTGAAAGAAGGACTTGACGGAAATGATGCTCTGCGCTTGTTCTTATGGAGTCCTGAAACAAAGCAACTTTTGAGCGTTGAAGAAGAATCTCAATTGATTGCTCAAATACAGGATTTATTTAAATTGAAAGAAACAAAGATCAAACTTCAGTCTCATTTTGGAAGGGAACCAACTTTGGCTGAATGGGCAGATGGTGTGGGCCTTAGCTGTCGTGACCTTCAGAAACGACTTCATTGTGGAGGGAAGTATGGGCCTTATGAGGAGTGTCGAAAAGTTCAAACCCCAAGCTGGTTGCCGGTTCAGTACTTACGCTTACTGGTGGATAAGGCAAACAATAAGGAGGGCCTTATTTCTGCATTCCAAAACAATTCGTCTGCCGATTGCGGAAGCAAAAAATCGTACATTAAAGAAGGAAATCTTCACCCCACCAAAGAAGAAATAGCAAAGCGAGTAGGAATTACAGTAGATAGGTTGGAAATGTTGCTATTTTCTACAAGAACTCCGCTTTCGATGGAGCGAGCTGTATGGGCAGACTCGGACACAACTTTCCAGGAGATTACTGCAGACTCTGCAATTGAGATCCCAACTGTATGTGTTGCAAAACAACTAATGAGGAGCCATGTACGCAACCTCCTAGGTATTTTGCCTCCAAAAGAAAGGAAGGTACTCAGGCTAAGATTTGGTATTGAAGATGGCTATGAGAAATCTTTGTCAGAAATTGGCAAGGTGTTGGGTGTGTGTAAGGAGAGGGTCAGACAATTGGAGAGCCAAGCGTTGAACAAGCTCAAGCAGTGCCTTGTTAGTCAACAACTTGATGCATATGTAGACTTGATTGTATAG

Protein sequence

>MsG0780040965.01.T01

MFSPPSTPFPSRILPSPSGTLIPISFVTIMMPHDQAVPAASSWPTSFSAQYFPTSVLLQEHRDEYRPLLHMCKEDKSPQATLNTRVTGVTSICEKINTGDVDELAHNCMQQLHLRCHLQNLLASSPEEDFVSSSSSTMLPADGFQWDALTLAKQALSASKQAAAVAEELKLVKVDDDNDDDSLSLGLADSSLGKNKIVRSIRLKERRSKQRKVSNSKVLDDEMYLTKKSNVQRRLRLEKKLKEGLDGNDALRLFLWSPETKQLLSVEEESQLIAQIQDLFKLKETKIKLQSHFGREPTLAEWADGVGLSCRDLQKRLHCGGKYGPYEECRKVQTPSWLPVQYLRLLVDKANNKEGLISAFQNNSSADCGSKKSYIKEGNLHPTKEEIAKRVGITVDRLEMLLFSTRTPLSMERAVWADSDTTFQEITADSAIEIPTVCVAKQLMRSHVRNLLGILPPKERKVLRLRFGIEDGYEKSLSEIGKVLGVCKERVRQLESQALNKLKQCLVSQQLDAYVDLIV*