AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004662.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004662.01.T01 MTR_1g084140 90.278 576 22 5 1 545 1 573 0.0 991
MsG0180004662.01.T01 MTR_4g013240 24.733 469 268 16 136 539 32 480 5.95e-17 84.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004662.01.T01 AT5G26820 59.797 592 199 8 1 557 7 594 0.0 646
MsG0180004662.01.T01 AT5G03570 24.709 344 218 8 219 531 146 479 3.77e-14 75.5
MsG0180004662.01.T01 AT5G03570 24.709 344 218 8 219 531 146 479 3.77e-14 75.5
MsG0180004662.01.T01 AT5G03570 24.709 344 218 8 219 531 101 434 4.88e-14 75.1

Find 160 sgRNAs with CRISPR-Local

Find 437 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAATTGCTCACTATTATT+TGG 0.097948 1:-80973214 MsG0180004662.01.T01:three_prime_UTR
GCCTGTAATTCTTCTGTAAA+TGG 0.167514 1:-80973425 MsG0180004662.01.T01:three_prime_UTR
GCAGATTACAGGATGAAATT+TGG 0.168385 1:+80976837 None:intergenic
GCAAACGATCCTTCTCATTT+TGG 0.171545 1:-80974171 MsG0180004662.01.T01:CDS
CTAATTGTTTCCGACATATT+TGG 0.201309 1:+80973504 None:intergenic
CTCATAGATAGATAAGATTT+TGG 0.205931 1:-80979320 MsG0180004662.01.T01:five_prime_UTR
ATCTGCTTAAAAGTTGTTTC+TGG 0.226919 1:-80976820 MsG0180004662.01.T01:CDS
AAGCTTTGTGGTGTGGCTTT+GGG 0.232750 1:-80977544 MsG0180004662.01.T01:CDS
TATCTATGAGAATAAGATTA+TGG 0.243371 1:+80979333 None:intergenic
CTAAACTTTAGAAAAGAATA+TGG 0.260660 1:+80973302 None:intergenic
TCCATTTACAGAAGAATTAC+AGG 0.265566 1:+80973424 None:intergenic
TGCTCACTATTATTTGGATT+TGG 0.268353 1:-80973208 MsG0180004662.01.T01:three_prime_UTR
TCGACTCTGGTCAAGCAATT+TGG 0.274301 1:-80975964 MsG0180004662.01.T01:CDS
GAAGCTTTGTGGTGTGGCTT+TGG 0.281406 1:-80977545 MsG0180004662.01.T01:CDS
CATAATAAATTGAGTTAGTT+AGG 0.289204 1:-80973373 MsG0180004662.01.T01:three_prime_UTR
TAAAATCAATACTGATATTC+TGG 0.298842 1:-80978772 MsG0180004662.01.T01:CDS
AAATCTCAGGCTTCTGTATC+AGG 0.306728 1:+80973461 None:intergenic
GCGTCCATGGTTTGTCGTAT+TGG 0.321719 1:-80977587 MsG0180004662.01.T01:CDS
GCTACTCCGGCACACCCTGC+TGG 0.330733 1:-80978565 MsG0180004662.01.T01:CDS
ATGTTTGAATGGATATTATA+CGG 0.332340 1:+80979366 None:intergenic
GGTGAAATGGATGAGATTAA+AGG 0.336046 1:+80979098 None:intergenic
CACAGCTGACAGGAGTTAAT+AGG 0.336528 1:-80977404 MsG0180004662.01.T01:intron
AACAGAGAACTTACTGTAAC+AGG 0.338783 1:+80976778 None:intergenic
CCAGGCTGGGGCAGTTGGGT+TGG 0.341613 1:-80975834 MsG0180004662.01.T01:intron
CAACAGGTTTGTGATGGTTT+AGG 0.341872 1:+80976620 None:intergenic
TACTGATATACAATTGGAAT+TGG 0.354236 1:-80978862 MsG0180004662.01.T01:CDS
AGAAGTTGCTGTTGCAAGTC+TGG 0.361361 1:-80974226 MsG0180004662.01.T01:CDS
GGGGCGCAAATTATCCAAAC+TGG 0.362063 1:-80974285 MsG0180004662.01.T01:CDS
GGGTTGCAAATGAGCGTGAC+TGG 0.367569 1:-80977522 MsG0180004662.01.T01:CDS
CTCTTGCCAGTTGCTGTGGT+GGG 0.374283 1:-80977869 MsG0180004662.01.T01:CDS
GCCTTGTTGCAAAGACTGTT+GGG 0.384254 1:-80973539 MsG0180004662.01.T01:CDS
TCCATCATTGGAGGATTTAG+TGG 0.389879 1:-80976027 MsG0180004662.01.T01:CDS
TTTGTCGTATTGGTTTCAGC+TGG 0.397742 1:-80977577 MsG0180004662.01.T01:CDS
ACAAGAAACGAGGACAACTA+TGG 0.398430 1:-80979136 MsG0180004662.01.T01:exon
AACGAATACTGATATACAAT+TGG 0.400757 1:-80978868 MsG0180004662.01.T01:CDS
TGAGTTGGACGAAACCTAAC+TGG 0.405581 1:-80979190 MsG0180004662.01.T01:five_prime_UTR
TGTGCACTAATATAATATAA+AGG 0.405676 1:+80973394 None:intergenic
AAGAAACCCACCACAGCAAC+TGG 0.408080 1:+80977863 None:intergenic
CTACATTGCTTCTGCGTCCA+TGG 0.410181 1:-80977600 MsG0180004662.01.T01:CDS
ATCTATGAGAATAAGATTAT+GGG 0.412735 1:+80979334 None:intergenic
AACATTCGTGTCTTCGACTC+TGG 0.414974 1:-80975977 MsG0180004662.01.T01:CDS
TGGATGATGGGATCCCAGTT+TGG 0.424363 1:+80974271 None:intergenic
AGTTGTTTCTGGCTTAATGA+TGG 0.425463 1:-80976809 MsG0180004662.01.T01:CDS
TGCCTTGTTGCAAAGACTGT+TGG 0.428527 1:-80973540 MsG0180004662.01.T01:CDS
ATAGCTGGAGCATTGCTGTT+TGG 0.430015 1:-80976871 MsG0180004662.01.T01:CDS
TGGTGGAAAACCAGTTGTTA+AGG 0.430182 1:-80976485 MsG0180004662.01.T01:intron
ACTAAAGTGGCTATAATTGT+TGG 0.430851 1:-80977839 MsG0180004662.01.T01:CDS
ATGAGATTTGCTTTGGATGA+TGG 0.434327 1:+80974258 None:intergenic
CAGGATGAAATTTGGAAAGA+AGG 0.437395 1:+80976845 None:intergenic
CTTCAAGCTGTGGAACTTGA+AGG 0.439189 1:+80979163 None:intergenic
TAATACCTCTGAGTGATAGA+AGG 0.441855 1:+80979000 None:intergenic
TTTGCTTGTGCAAGTGCGAC+TGG 0.446486 1:+80977381 None:intergenic
TATAATTGTTGGTGGTCCCT+TGG 0.449655 1:-80977828 MsG0180004662.01.T01:intron
CCTCTTGCCAGTTGCTGTGG+TGG 0.452842 1:-80977870 MsG0180004662.01.T01:CDS
AGTCCCGATGAGATTTGCTT+TGG 0.459197 1:+80974251 None:intergenic
TTGTCGTATTGGTTTCAGCT+GGG 0.460813 1:-80977576 MsG0180004662.01.T01:CDS
GGCTTACATCCATCCATCAT+TGG 0.464689 1:-80976039 MsG0180004662.01.T01:CDS
TTCATCGAATGATCTGCAAC+AGG 0.464699 1:+80976604 None:intergenic
AAGAAGGAGGAATGGTGAAA+TGG 0.466110 1:+80979085 None:intergenic
CAGCATGGATGTTCTGTAGA+TGG 0.466645 1:-80974110 MsG0180004662.01.T01:intron
TATTATTTGGATTTGGCTGA+AGG 0.467519 1:-80973201 MsG0180004662.01.T01:three_prime_UTR
AGCTTTGTGGTGTGGCTTTG+GGG 0.469755 1:-80977543 MsG0180004662.01.T01:CDS
TGATAGAAGGATAGTAATTG+AGG 0.470293 1:+80979013 None:intergenic
GGTGGAAAACCAGTTGTTAA+GGG 0.471640 1:-80976484 MsG0180004662.01.T01:intron
GCATCAGATGCTGACAGTAT+AGG 0.471700 1:-80976575 MsG0180004662.01.T01:intron
GGGGCTATTGAGAAGCTTTG+TGG 0.472566 1:-80977556 MsG0180004662.01.T01:CDS
GTTGTTTCTGGCTTAATGAT+GGG 0.482162 1:-80976808 MsG0180004662.01.T01:CDS
TTTCTACCGGCGTTCTTGAC+CGG 0.483139 1:-80976643 MsG0180004662.01.T01:CDS
TCCACTAAATCCTCCAATGA+TGG 0.486598 1:+80976026 None:intergenic
AAAACCAGTTGTTAAGGGTC+TGG 0.491610 1:-80976479 MsG0180004662.01.T01:intron
AACTTGAAGGAAAACCAGTT+AGG 0.492169 1:+80979176 None:intergenic
TGAGATTTGCTTTGGATGAT+GGG 0.493099 1:+80974259 None:intergenic
CTCGGCTGGAAAGAGTATCT+TGG 0.496656 1:-80976445 MsG0180004662.01.T01:CDS
GGAATAATGTAATGTTTGAA+TGG 0.498362 1:+80979355 None:intergenic
GGTTTATTTCCACAGCTGAC+AGG 0.500274 1:-80977414 MsG0180004662.01.T01:intron
GGAATTGGATCATGTTAATG+AGG 0.503114 1:-80978847 MsG0180004662.01.T01:CDS
ATTGAGTTAGTTAGGTGTCT+AGG 0.503347 1:-80973365 MsG0180004662.01.T01:three_prime_UTR
CTACTCCGGCACACCCTGCT+GGG 0.504482 1:-80978564 MsG0180004662.01.T01:intron
TGGAAGCTATCAAGCTCGGC+TGG 0.508035 1:-80976459 MsG0180004662.01.T01:CDS
CATCCAAAGCAAATCTCATC+GGG 0.512204 1:-80974254 MsG0180004662.01.T01:CDS
GCAATACTAGCAGGAAGGAC+TGG 0.519217 1:+80976418 None:intergenic
TTACAATCAGAGACAAGAAA+AGG 0.520529 1:+80975735 None:intergenic
GGTGGGTTTCTTCACTAAAG+TGG 0.522472 1:-80977852 MsG0180004662.01.T01:CDS
TCAAGCTTTATTTCTCAGCA+TGG 0.524182 1:-80975807 MsG0180004662.01.T01:CDS
ATCCCACCATATAACCCAGC+AGG 0.525279 1:+80978550 None:intergenic
AAGCCTCTTGCCAGTTGCTG+TGG 0.527013 1:-80977873 MsG0180004662.01.T01:CDS
TCTAATAAGACTGCATGAGT+TGG 0.528023 1:-80979205 MsG0180004662.01.T01:five_prime_UTR
TCCTTCCTGCTAGTATTGCG+TGG 0.529013 1:-80976414 MsG0180004662.01.T01:CDS
TATTGAGAAGCTTTGTGGTG+TGG 0.529833 1:-80977551 MsG0180004662.01.T01:CDS
AACGCCGGTAGAAAGCTTGT+TGG 0.538024 1:+80976652 None:intergenic
GGTTGATGCGAGAAAGAAGG+AGG 0.539493 1:+80979072 None:intergenic
ATGCGAGAAAGAAGGAGGAA+TGG 0.541534 1:+80979077 None:intergenic
AATGTTGTCTCTTCTATCAG+TGG 0.542189 1:-80974139 MsG0180004662.01.T01:CDS
TGAGCGTGACTGGGTTGTGC+TGG 0.542195 1:-80977512 MsG0180004662.01.T01:intron
TTAACCAACAAGCTTTCTAC+CGG 0.542347 1:-80976656 MsG0180004662.01.T01:CDS
TATAACCCAGCAGGGTGTGC+CGG 0.542542 1:+80978559 None:intergenic
GAAGGTTGATGCGAGAAAGA+AGG 0.545398 1:+80979069 None:intergenic
TGAACATTACTCAAAACAAA+GGG 0.547754 1:-80979246 MsG0180004662.01.T01:five_prime_UTR
TTGTCTCTTCTATCAGTGGT+TGG 0.547810 1:-80974135 MsG0180004662.01.T01:CDS
ACATGTCATATGATGTCGTA+GGG 0.548784 1:-80974305 MsG0180004662.01.T01:CDS
TCTTGTGAAACTTCAAGCTG+TGG 0.549218 1:+80979153 None:intergenic
CTAAATCCTCCAATGATGGA+TGG 0.550468 1:+80976030 None:intergenic
TTCAATATTGTTCTTACACC+AGG 0.554964 1:-80976379 MsG0180004662.01.T01:CDS
AGCACCCACGCAATACTAGC+AGG 0.557563 1:+80976409 None:intergenic
ACATGTTCTTGCAGCTACTC+CGG 0.558596 1:-80978578 MsG0180004662.01.T01:CDS
CAAGAGGCTTGAATGAATCA+AGG 0.559351 1:+80977886 None:intergenic
CTTTACAAAACGTTTATGCA+TGG 0.559652 1:+80973338 None:intergenic
CTTTGCAACAAGGCAGCTAG+TGG 0.560103 1:+80973548 None:intergenic
GCTTTGTGGTGTGGCTTTGG+GGG 0.562182 1:-80977542 MsG0180004662.01.T01:CDS
CTGGCAGAGTCTCTAATGCT+TGG 0.562890 1:-80974207 MsG0180004662.01.T01:CDS
ATTATTTGGATTTGGCTGAA+GGG 0.563097 1:-80973200 MsG0180004662.01.T01:three_prime_UTR
CCTTCCTGCTAGTATTGCGT+GGG 0.565115 1:-80976413 MsG0180004662.01.T01:CDS
GTTGCAAAGACTGTTGGGTG+TGG 0.565452 1:-80973534 MsG0180004662.01.T01:CDS
AGAGACAAGAAAAGGAGAAG+AGG 0.569930 1:+80975743 None:intergenic
ATTACTCAAAACAAAGGGAA+AGG 0.570265 1:-80979241 MsG0180004662.01.T01:five_prime_UTR
TGAATCAAGGCAATGGCAGA+AGG 0.572956 1:+80977899 None:intergenic
TATCAGTGGTTGGTGCAGCA+TGG 0.573779 1:-80974125 MsG0180004662.01.T01:CDS
GAAATGGATGAGATTAAAGG+AGG 0.575293 1:+80979101 None:intergenic
TCATCCAAAGCAAATCTCAT+CGG 0.577100 1:-80974255 MsG0180004662.01.T01:CDS
CGATAGCGTAATCTCGAAGA+AGG 0.580595 1:+80979051 None:intergenic
AATGCTGTCATCAAACTGCC+TGG 0.581730 1:+80976361 None:intergenic
ATGAACATTACTCAAAACAA+AGG 0.582795 1:-80979247 MsG0180004662.01.T01:five_prime_UTR
GGTTGCAAATGAGCGTGACT+GGG 0.583770 1:-80977521 MsG0180004662.01.T01:CDS
TGTCGTATTGGTTTCAGCTG+GGG 0.584794 1:-80977575 MsG0180004662.01.T01:CDS
GCTAAACATCCAAAATGAGA+AGG 0.588441 1:+80974162 None:intergenic
AAAGTGGCTATAATTGTTGG+TGG 0.593039 1:-80977836 MsG0180004662.01.T01:CDS
AATCAATACTGATATTCTGG+TGG 0.598210 1:-80978769 MsG0180004662.01.T01:CDS
GTTAATGAGGATAAGAGTGA+AGG 0.602355 1:-80978834 MsG0180004662.01.T01:CDS
AGGTTTGTGATGGTTTAGGC+CGG 0.604701 1:+80976624 None:intergenic
GAAACCAATACGACAAACCA+TGG 0.610451 1:+80977583 None:intergenic
AAATGGATGAGATTAAAGGA+GGG 0.610645 1:+80979102 None:intergenic
ACAGACTTGCTGCGGAATTG+TGG 0.612079 1:-80973272 MsG0180004662.01.T01:three_prime_UTR
ACCCAACAGTCTTTGCAACA+AGG 0.612889 1:+80973538 None:intergenic
GAAATGTAACAGACTTGCTG+CGG 0.616619 1:-80973280 MsG0180004662.01.T01:three_prime_UTR
TCTCAGGCTTCTGTATCAGG+TGG 0.616834 1:+80973464 None:intergenic
GCTTGAATGAATCAAGGCAA+TGG 0.619193 1:+80977892 None:intergenic
TTACATCCATCCATCATTGG+AGG 0.619549 1:-80976036 MsG0180004662.01.T01:CDS
TCGAATTGATCTGTTATCTG+AGG 0.619996 1:-80977346 MsG0180004662.01.T01:intron
GGTCTGGAAGCTATCAAGCT+CGG 0.620628 1:-80976463 MsG0180004662.01.T01:CDS
CACATGTCATATGATGTCGT+AGG 0.620963 1:-80974306 MsG0180004662.01.T01:CDS
TATGTCGGAAACAATTAGCA+TGG 0.622256 1:-80973499 MsG0180004662.01.T01:CDS
GATCTGCAACAGGTTTGTGA+TGG 0.622696 1:+80976614 None:intergenic
CCACCACAGCAACTGGCAAG+AGG 0.629861 1:+80977870 None:intergenic
TGGACAAGAACCAAATATGT+CGG 0.632352 1:-80973514 MsG0180004662.01.T01:CDS
GGGCGCAAATTATCCAAACT+GGG 0.634115 1:-80974284 MsG0180004662.01.T01:CDS
AGCAATGTAGACACTGAAGT+AGG 0.635319 1:+80977613 None:intergenic
CCCACGCAATACTAGCAGGA+AGG 0.637832 1:+80976413 None:intergenic
GCTGTTGCTGTATATATGAG+TGG 0.644425 1:-80975785 MsG0180004662.01.T01:CDS
AATGTAGACACTGAAGTAGG+AGG 0.659268 1:+80977616 None:intergenic
TTTAGGCCGGTCAAGAACGC+CGG 0.663850 1:+80976637 None:intergenic
AGACACTGAAGTAGGAGGCA+CGG 0.667896 1:+80977621 None:intergenic
TCCCACCATATAACCCAGCA+GGG 0.668296 1:+80978551 None:intergenic
GTCGGAAACAATTAGCATGG+TGG 0.674364 1:-80973496 MsG0180004662.01.T01:CDS
TGTCAAGACAGTATCTACAA+AGG 0.690460 1:+80978713 None:intergenic
CAAGACAGTATCTACAAAGG+CGG 0.696073 1:+80978716 None:intergenic
ACTATCCTTCTATCACTCAG+AGG 0.699376 1:-80979005 MsG0180004662.01.T01:intron
CATGTCATATGATGTCGTAG+GGG 0.709264 1:-80974304 MsG0180004662.01.T01:CDS
TTGAAGTTTCACAAGAAACG+AGG 0.711096 1:-80979146 MsG0180004662.01.T01:five_prime_UTR
TTTGAATGGATATTATACGG+CGG 0.727405 1:+80979369 None:intergenic
AGCTGCTGATAGTAACTGAG+TGG 0.727569 1:+80977663 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAGTGTTATATTGTATT+GGG - Chr1:80975420-80975439 MsG0180004662.01.T01:intron 15.0%
!! GAATAAATAATATGCAATTT+GGG + Chr1:80978091-80978110 None:intergenic 15.0%
!! TAATTATTTATGATTCTTAG+TGG - Chr1:80975100-80975119 MsG0180004662.01.T01:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - Chr1:80975419-80975438 MsG0180004662.01.T01:intron 15.0%
!! TGAATAAATAATATGCAATT+TGG + Chr1:80978092-80978111 None:intergenic 15.0%
!! TTGAAAATAAAGAATTTACA+AGG + Chr1:80977892-80977911 None:intergenic 15.0%
!! TTGTTAGATAAAATATTGTT+AGG + Chr1:80978938-80978957 None:intergenic 15.0%
!!! AAAATAGAATGATTGATTTT+AGG + Chr1:80974845-80974864 None:intergenic 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG - Chr1:80975355-80975374 MsG0180004662.01.T01:intron 15.0%
!!! ATATCAGTATTGATTTTAAT+CGG + Chr1:80973761-80973780 None:intergenic 15.0%
!!! CTTTAAAAATTTCAGTAAAT+TGG - Chr1:80978860-80978879 MsG0180004662.01.T01:CDS 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG - Chr1:80975354-80975373 MsG0180004662.01.T01:intron 15.0%
!!! TTTTTCAAAGGAAAAATAAT+TGG + Chr1:80977024-80977043 None:intergenic 15.0%
!! AAAAATAAAAGTGATCCAAA+AGG - Chr1:80977183-80977202 MsG0180004662.01.T01:intron 20.0%
!! AAAAATACATAAGACTGAAT+TGG + Chr1:80978898-80978917 None:intergenic 20.0%
!! AAAATAAAAGTGATCCAAAA+GGG - Chr1:80977184-80977203 MsG0180004662.01.T01:intron 20.0%
!! AAAGTGGAATATATTGTATT+GGG - Chr1:80975379-80975398 MsG0180004662.01.T01:intron 20.0%
!! AAATAAATTAGTGACCTAAA+TGG - Chr1:80977821-80977840 MsG0180004662.01.T01:intron 20.0%
!! AACATTGCAAATTGTTTATA+GGG - Chr1:80977535-80977554 MsG0180004662.01.T01:CDS 20.0%
!! AATGTGCATTATATATTTGA+TGG - Chr1:80977315-80977334 MsG0180004662.01.T01:intron 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - Chr1:80975452-80975471 MsG0180004662.01.T01:intron 20.0%
!! ATAGAGAAAATACAAAGTTA+TGG - Chr1:80977257-80977276 MsG0180004662.01.T01:intron 20.0%
!! ATCTATGAGAATAAGATTAT+GGG + Chr1:80973204-80973223 None:intergenic 20.0%
!! ATGTTTGAATGGATATTATA+CGG + Chr1:80973172-80973191 None:intergenic 20.0%
!! ATTTAGGTCACTAATTTATT+TGG + Chr1:80977822-80977841 None:intergenic 20.0%
!! CATAATAAATTGAGTTAGTT+AGG - Chr1:80979162-80979181 MsG0180004662.01.T01:five_prime_UTR 20.0%
!! GAAATTCGAACTTATATAAA+TGG + Chr1:80973591-80973610 None:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - Chr1:80975453-80975472 MsG0180004662.01.T01:intron 20.0%
!! TAAAATCAATACTGATATTC+TGG - Chr1:80973763-80973782 MsG0180004662.01.T01:intron 20.0%
!! TAACATTGCAAATTGTTTAT+AGG - Chr1:80977534-80977553 MsG0180004662.01.T01:CDS 20.0%
!! TAGAGAAAATACAAAGTTAT+GGG - Chr1:80977258-80977277 MsG0180004662.01.T01:intron 20.0%
!! TATCTATGAGAATAAGATTA+TGG + Chr1:80973205-80973224 None:intergenic 20.0%
!! TATGTATGAAATCACAAAAT+AGG + Chr1:80974296-80974315 None:intergenic 20.0%
!! TGTGCACTAATATAATATAA+AGG + Chr1:80979144-80979163 None:intergenic 20.0%
!! TTACATAAATATCAAAACTG+AGG + Chr1:80978496-80978515 None:intergenic 20.0%
!! TTCAAACAATCTTACAAAAA+AGG + Chr1:80977719-80977738 None:intergenic 20.0%
!! TTCATGAGACAATAATAAAT+TGG + Chr1:80975572-80975591 None:intergenic 20.0%
!! TTTATTCAAACAATGACTAA+AGG + Chr1:80977166-80977185 None:intergenic 20.0%
!!! AAATCAATCATTCTATTTTC+AGG - Chr1:80974846-80974865 MsG0180004662.01.T01:intron 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG - Chr1:80975356-80975375 MsG0180004662.01.T01:intron 20.0%
!!! ATTCTAAAATTTCCTAAGAA+AGG + Chr1:80978796-80978815 None:intergenic 20.0%
!!! CATTGTTTCTTATCTTTTTA+TGG - Chr1:80973898-80973917 MsG0180004662.01.T01:intron 20.0%
!!! CATTTTTTGAAATACAAACT+TGG - Chr1:80978110-80978129 MsG0180004662.01.T01:intron 20.0%
!!! CTAAACTTTAGAAAAGAATA+TGG + Chr1:80979236-80979255 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - Chr1:80975489-80975508 MsG0180004662.01.T01:intron 20.0%
!!! TAAAAGTATGCTAATTAACT+TGG + Chr1:80975226-80975245 None:intergenic 20.0%
!!! TACTGTTTTGATGAAAAAAT+TGG - Chr1:80979394-80979413 MsG0180004662.01.T01:five_prime_UTR 20.0%
!!! TGTATTTTCTCTATATTTCA+AGG + Chr1:80977251-80977270 None:intergenic 20.0%
!!! TGTTATATTTTTCCTTTCTT+AGG - Chr1:80978781-80978800 MsG0180004662.01.T01:CDS 20.0%
!!! TTTAAAATTGTGTCTTTCTT+CGG - Chr1:80974143-80974162 MsG0180004662.01.T01:CDS 20.0%
! AAATAAAAGTGATCCAAAAG+GGG - Chr1:80977185-80977204 MsG0180004662.01.T01:intron 25.0%
! AAATAACAAACTACATGTCA+AGG + Chr1:80975076-80975095 None:intergenic 25.0%
! AACACATGATATTTGTAAAG+AGG + Chr1:80977683-80977702 None:intergenic 25.0%
! AACGAATACTGATATACAAT+TGG - Chr1:80973667-80973686 MsG0180004662.01.T01:intron 25.0%
! AATAACAAACTACATGTCAA+GGG + Chr1:80975075-80975094 None:intergenic 25.0%
! ACACATGATATTTGTAAAGA+GGG + Chr1:80977682-80977701 None:intergenic 25.0%
! ACATTGCAAATTGTTTATAG+GGG - Chr1:80977536-80977555 MsG0180004662.01.T01:CDS 25.0%
! AGACATGTCATAGAAAAATA+TGG + Chr1:80978552-80978571 None:intergenic 25.0%
! AGTATATGCTTATATCTATC+TGG - Chr1:80976030-80976049 MsG0180004662.01.T01:CDS 25.0%
! ATATATTTGGATATGGACAA+AGG - Chr1:80977564-80977583 MsG0180004662.01.T01:CDS 25.0%
! ATGAACATTACTCAAAACAA+AGG - Chr1:80973288-80973307 MsG0180004662.01.T01:three_prime_UTR 25.0%
! ATTTCAAGGACAAAATTCAT+AGG + Chr1:80977237-80977256 None:intergenic 25.0%
! CAAAGTAGGTCAATTAAATT+GGG + Chr1:80975319-80975338 None:intergenic 25.0%
! CTAAGACAACATATATGATA+TGG + Chr1:80974041-80974060 None:intergenic 25.0%
! CTTAGATACCAAATATCAAA+GGG + Chr1:80976845-80976864 None:intergenic 25.0%
! GAAAAATATGGTAGTAAACA+AGG + Chr1:80978540-80978559 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - Chr1:80975378-80975397 MsG0180004662.01.T01:intron 25.0%
! GGAAAGAATATATTTGGATA+TGG - Chr1:80977557-80977576 MsG0180004662.01.T01:CDS 25.0%
! GGAATAATGTAATGTTTGAA+TGG + Chr1:80973183-80973202 None:intergenic 25.0%
! GTATGTGAAAATTTCCTAAA+TGG - Chr1:80976211-80976230 MsG0180004662.01.T01:intron 25.0%
! TAACCTAAAAAACTAATCCT+CGG + Chr1:80976435-80976454 None:intergenic 25.0%
! TACTGATATACAATTGGAAT+TGG - Chr1:80973673-80973692 MsG0180004662.01.T01:intron 25.0%
! TATAGGGGAAAGAATATATT+TGG - Chr1:80977551-80977570 MsG0180004662.01.T01:CDS 25.0%
! TATTGTCTCATGAAATATTC+AGG - Chr1:80975578-80975597 MsG0180004662.01.T01:intron 25.0%
! TCTTAGATACCAAATATCAA+AGG + Chr1:80976846-80976865 None:intergenic 25.0%
! TGAACATTACTCAAAACAAA+GGG - Chr1:80973289-80973308 MsG0180004662.01.T01:three_prime_UTR 25.0%
! TGATATGGATGTAGTTATTA+AGG + Chr1:80974026-80974045 None:intergenic 25.0%
! TGATTGTAAGTCACTAAAAA+AGG - Chr1:80976814-80976833 MsG0180004662.01.T01:CDS 25.0%
! TGTATGAGTGAAAAAAGATT+TGG - Chr1:80978061-80978080 MsG0180004662.01.T01:intron 25.0%
! TTACATTCCACAAGTAAATA+GGG + Chr1:80974217-80974236 None:intergenic 25.0%
! TTCAAAGGAAAAATAATTGG+AGG + Chr1:80977021-80977040 None:intergenic 25.0%
! TTCAGGAGACAATAATAAAT+TGG + Chr1:80975260-80975279 None:intergenic 25.0%
! TTTACATTCCACAAGTAAAT+AGG + Chr1:80974218-80974237 None:intergenic 25.0%
!! AACAAAAAATGTCCTTTTCT+TGG - Chr1:80978586-80978605 MsG0180004662.01.T01:CDS 25.0%
!! AATACAAACTTGGATTTTGA+TGG - Chr1:80978120-80978139 MsG0180004662.01.T01:intron 25.0%
!! ACAAAAAATGTCCTTTTCTT+GGG - Chr1:80978587-80978606 MsG0180004662.01.T01:CDS 25.0%
!! ATTACTTCATTTTGAGCAAA+TGG - Chr1:80979361-80979380 MsG0180004662.01.T01:five_prime_UTR 25.0%
!! CTCATAGATAGATAAGATTT+TGG - Chr1:80973215-80973234 MsG0180004662.01.T01:three_prime_UTR 25.0%
!! GATATTTTCACCTTTACTAA+GGG + Chr1:80978836-80978855 None:intergenic 25.0%
!! TAGCATACTTTTATACTTCT+CGG - Chr1:80975233-80975252 MsG0180004662.01.T01:intron 25.0%
!! TTGAAAATATTCTCTTTTCC+AGG - Chr1:80976683-80976702 MsG0180004662.01.T01:intron 25.0%
!!! AGGAAATTTTAGAATTCTGT+TGG - Chr1:80978801-80978820 MsG0180004662.01.T01:CDS 25.0%
!!! ATTTGTCATCGATTTTTCAA+AGG + Chr1:80977036-80977055 None:intergenic 25.0%
!!! ATTTTTCAATTTCAGATAGC+TGG - Chr1:80975649-80975668 MsG0180004662.01.T01:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - Chr1:80975488-80975507 MsG0180004662.01.T01:intron 25.0%
!!! GTTTTGATGAAAAAATTGGT+AGG - Chr1:80979398-80979417 MsG0180004662.01.T01:five_prime_UTR 25.0%
!!! TCCTTTTCCTTGTTTTATTT+GGG - Chr1:80976408-80976427 MsG0180004662.01.T01:CDS 25.0%
!!! TGTTTCTACAGATTTTATCA+CGG - Chr1:80978200-80978219 MsG0180004662.01.T01:intron 25.0%
!!! TTATGGTTTGTTATGTATGT+AGG - Chr1:80973915-80973934 MsG0180004662.01.T01:intron 25.0%
!!! TTCCTTTTCCTTGTTTTATT+TGG - Chr1:80976407-80976426 MsG0180004662.01.T01:CDS 25.0%
AAAGCCATAGAAAAAATCTC+AGG + Chr1:80979090-80979109 None:intergenic 30.0%
AAATACAAAGTTATGGGACA+AGG - Chr1:80977264-80977283 MsG0180004662.01.T01:intron 30.0%
AAATGCTGAAAATCTTACGT+TGG - Chr1:80974319-80974338 MsG0180004662.01.T01:CDS 30.0%
AAATGGATGAGATTAAAGGA+GGG + Chr1:80973436-80973455 None:intergenic 30.0%
AACAATCCATATCACCATTT+AGG + Chr1:80977838-80977857 None:intergenic 30.0%
AAGATTGTTTGAACGTATCT+AGG - Chr1:80977726-80977745 MsG0180004662.01.T01:intron 30.0%
AAGTGCTTTCATTTGTTTGA+TGG - Chr1:80974370-80974389 MsG0180004662.01.T01:intron 30.0%
AATCAATACTGATATTCTGG+TGG - Chr1:80973766-80973785 MsG0180004662.01.T01:intron 30.0%
AATCTGTTGTATAACTGCAT+TGG - Chr1:80978636-80978655 MsG0180004662.01.T01:intron 30.0%
AATTTGTGAGTTTCAAAGTC+AGG + Chr1:80975632-80975651 None:intergenic 30.0%
ACTAAAGTGGCTATAATTGT+TGG - Chr1:80974696-80974715 MsG0180004662.01.T01:intron 30.0%
ACTGAGGATGATAAGAAAAA+AGG + Chr1:80978480-80978499 None:intergenic 30.0%
ACTTCTTTCAAGCTTCAAAT+AGG - Chr1:80977464-80977483 MsG0180004662.01.T01:intron 30.0%
AGAAAGTTCCTGAATATTTC+AGG + Chr1:80975277-80975296 None:intergenic 30.0%
AGTGCTTTCATTTGTTTGAT+GGG - Chr1:80974371-80974390 MsG0180004662.01.T01:intron 30.0%
ATATGCTTATATCTATCTGG+TGG - Chr1:80976033-80976052 MsG0180004662.01.T01:CDS 30.0%
ATCAATCCCTATAGTAACTT+TGG + Chr1:80977383-80977402 None:intergenic 30.0%
ATTACTCAAAACAAAGGGAA+AGG - Chr1:80973294-80973313 MsG0180004662.01.T01:three_prime_UTR 30.0%
ATTATTTGGATTTGGCTGAA+GGG - Chr1:80979335-80979354 MsG0180004662.01.T01:five_prime_UTR 30.0%
ATTCCATATGTATAGAGCAA+TGG + Chr1:80974257-80974276 None:intergenic 30.0%
ATTTGTGAGTTTCAAAGTCA+GGG + Chr1:80975631-80975650 None:intergenic 30.0%
CAAACATCAATAAGTGTACA+AGG + Chr1:80974506-80974525 None:intergenic 30.0%
CCAAAGTAGGTCAATTAAAT+TGG + Chr1:80975320-80975339 None:intergenic 30.0%
CCAATTTAATTGACCTACTT+TGG - Chr1:80975317-80975336 MsG0180004662.01.T01:intron 30.0%
CTAATTGTTTCCGACATATT+TGG + Chr1:80979034-80979053 None:intergenic 30.0%
CTCAATTGCTCACTATTATT+TGG - Chr1:80979321-80979340 MsG0180004662.01.T01:five_prime_UTR 30.0%
CTTTACAAAACGTTTATGCA+TGG + Chr1:80979200-80979219 None:intergenic 30.0%
GACGATCACTATTTACAAAA+AGG + Chr1:80977616-80977635 None:intergenic 30.0%
GTGATAAAATCTGTAGAAAC+AGG + Chr1:80978201-80978220 None:intergenic 30.0%
GTGCATTATATATTTGATGG+TGG - Chr1:80977318-80977337 MsG0180004662.01.T01:intron 30.0%
TAACTACTTAACTGTCATTC+AGG - Chr1:80974770-80974789 MsG0180004662.01.T01:intron 30.0%
TACACTTATTGATGTTTGTG+TGG - Chr1:80974508-80974527 MsG0180004662.01.T01:intron 30.0%
TACATTCCACAAGTAAATAG+GGG + Chr1:80974216-80974235 None:intergenic 30.0%
TAGTTATATGCAGAAACTCT+CGG + Chr1:80974756-80974775 None:intergenic 30.0%
TATACAATAACCACATCAGT+AGG + Chr1:80977640-80977659 None:intergenic 30.0%
TATCCATTGCTCTATACATA+TGG - Chr1:80974251-80974270 MsG0180004662.01.T01:CDS 30.0%
TATGTATAGAGCAATGGATA+CGG + Chr1:80974251-80974270 None:intergenic 30.0%
TATTATTTGGATTTGGCTGA+AGG - Chr1:80979334-80979353 MsG0180004662.01.T01:five_prime_UTR 30.0%
TATTGTCTCCTGAAATATTC+AGG - Chr1:80975266-80975285 MsG0180004662.01.T01:intron 30.0%
TCCATTTACAGAAGAATTAC+AGG + Chr1:80979114-80979133 None:intergenic 30.0%
TCCCAAATAAAACAAGGAAA+AGG + Chr1:80976412-80976431 None:intergenic 30.0%
TGATAGAAGGATAGTAATTG+AGG + Chr1:80973525-80973544 None:intergenic 30.0%
TGATATTTGTAAAGAGGGTT+TGG + Chr1:80977677-80977696 None:intergenic 30.0%
TGATGACCAAAGTTACTATA+GGG - Chr1:80977374-80977393 MsG0180004662.01.T01:CDS 30.0%
TGCTCACTATTATTTGGATT+TGG - Chr1:80979327-80979346 MsG0180004662.01.T01:five_prime_UTR 30.0%
TGTATAAATAAAGGGGAAAG+TGG - Chr1:80975363-80975382 MsG0180004662.01.T01:intron 30.0%
TTACAATCAGAGACAAGAAA+AGG + Chr1:80976803-80976822 None:intergenic 30.0%
TTCAATATTGTTCTTACACC+AGG - Chr1:80976156-80976175 MsG0180004662.01.T01:intron 30.0%
TTGATGAAAAAATTGGTAGG+TGG - Chr1:80979401-80979420 MsG0180004662.01.T01:five_prime_UTR 30.0%
TTGCATAAATACCAAAGTTG+AGG + Chr1:80978615-80978634 None:intergenic 30.0%
TTTGAATGGATATTATACGG+CGG + Chr1:80973169-80973188 None:intergenic 30.0%
! AAGGTGATATCAAACAGTTT+TGG + Chr1:80974468-80974487 None:intergenic 30.0%
! ACAACTTTTAAGCAGATTAC+AGG + Chr1:80975712-80975731 None:intergenic 30.0%
! AGGTTTTTCCCTTTGATATT+TGG - Chr1:80976834-80976853 MsG0180004662.01.T01:CDS 30.0%
! ATATCCTGCTTGATTTTACA+AGG + Chr1:80974812-80974831 None:intergenic 30.0%
! ATCTGCTTAAAAGTTGTTTC+TGG - Chr1:80975715-80975734 MsG0180004662.01.T01:intron 30.0%
! ATTTGTTAGCAAACTAGACT+TGG - Chr1:80977923-80977942 MsG0180004662.01.T01:CDS 30.0%
! CAAGCAATTTGGCATTTTAA+AGG - Chr1:80976582-80976601 MsG0180004662.01.T01:CDS 30.0%
! CGATATTTTCACCTTTACTA+AGG + Chr1:80978837-80978856 None:intergenic 30.0%
! TGTATTGGGTGAAAATTTTG+CGG - Chr1:80977948-80977967 MsG0180004662.01.T01:CDS 30.0%
! TTGAAATGGGTCAGTTATTT+TGG - Chr1:80975466-80975485 MsG0180004662.01.T01:intron 30.0%
! TTGATGACCAAAGTTACTAT+AGG - Chr1:80977373-80977392 MsG0180004662.01.T01:CDS 30.0%
! TTGCATTGTTGCAAATTTTG+TGG - Chr1:80974590-80974609 MsG0180004662.01.T01:intron 30.0%
!! AAACTAGACTTGGTTTGTAT+TGG - Chr1:80977933-80977952 MsG0180004662.01.T01:CDS 30.0%
!! AACTAGACTTGGTTTGTATT+GGG - Chr1:80977934-80977953 MsG0180004662.01.T01:CDS 30.0%
!! AGATAGTGTGTTTTGAATAC+TGG - Chr1:80977860-80977879 MsG0180004662.01.T01:CDS 30.0%
!! AGCTTCATTGTTTTTCTAAC+TGG - Chr1:80977971-80977990 MsG0180004662.01.T01:intron 30.0%
!! TAGCCTACTTTTATACTTCT+CGG - Chr1:80975545-80975564 MsG0180004662.01.T01:intron 30.0%
!! TATATATTTGATGGTGGTGT+TGG - Chr1:80977324-80977343 MsG0180004662.01.T01:intron 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG - Chr1:80975467-80975486 MsG0180004662.01.T01:intron 30.0%
!! TGCTAATGGATTGAAATGAT+AGG - Chr1:80976891-80976910 MsG0180004662.01.T01:intron 30.0%
!!! GGTTGTTTTTTCATAGGTTT+AGG - Chr1:80973857-80973876 MsG0180004662.01.T01:intron 30.0%
!!! TTTGCAATTTTAGAGTATCC+AGG + Chr1:80976928-80976947 None:intergenic 30.0%
AAAGAAGCTTCCCAAAGAAA+GGG + Chr1:80976238-80976257 None:intergenic 35.0%
AAAGATTATGCTGCCAATGA+GGG - Chr1:80976284-80976303 MsG0180004662.01.T01:intron 35.0%
AAAGTGGCTATAATTGTTGG+TGG - Chr1:80974699-80974718 MsG0180004662.01.T01:intron 35.0%
AACAAGGAACGATAAATGCA+AGG + Chr1:80978524-80978543 None:intergenic 35.0%
AACAGAGAACTTACTGTAAC+AGG + Chr1:80975760-80975779 None:intergenic 35.0%
AACTTGAAGGAAAACCAGTT+AGG + Chr1:80973362-80973381 None:intergenic 35.0%
AATGTTGTCTCTTCTATCAG+TGG - Chr1:80978396-80978415 MsG0180004662.01.T01:intron 35.0%
ACAAGGAACGATAAATGCAA+GGG + Chr1:80978523-80978542 None:intergenic 35.0%
ACATATGGAATTGTGGAATG+TGG - Chr1:80974266-80974285 MsG0180004662.01.T01:CDS 35.0%
ACATGTCATATGATGTCGTA+GGG - Chr1:80978230-80978249 MsG0180004662.01.T01:intron 35.0%
ACATTCCACAAGTAAATAGG+GGG + Chr1:80974215-80974234 None:intergenic 35.0%
ACTGTCGTATGAAATCTTCA+GGG + Chr1:80976013-80976032 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG - Chr1:80975502-80975521 MsG0180004662.01.T01:intron 35.0%
AGGCTTAACAAGAAGCTTTA+AGG + Chr1:80977103-80977122 None:intergenic 35.0%
ATACTCCTAGGTCATATCTA+GGG - Chr1:80976990-80977009 MsG0180004662.01.T01:intron 35.0%
ATGAAATCTTCAGGGTCTAT+GGG + Chr1:80976005-80976024 None:intergenic 35.0%
ATTGAGTTAGTTAGGTGTCT+AGG - Chr1:80979170-80979189 MsG0180004662.01.T01:five_prime_UTR 35.0%
CAATAAGTGTACAAGGCATA+AGG + Chr1:80974499-80974518 None:intergenic 35.0%
CAGGATGAAATTTGGAAAGA+AGG + Chr1:80975693-80975712 None:intergenic 35.0%
CCTATGAAAAAACAACCTAC+AGG + Chr1:80973854-80973873 None:intergenic 35.0%
CTGAAGTAAGTTAATGAACG+AGG + Chr1:80975795-80975814 None:intergenic 35.0%
GAAATGGATGAGATTAAAGG+AGG + Chr1:80973437-80973456 None:intergenic 35.0%
GAATATAATTTCGACAGCCT+TGG - Chr1:80976864-80976883 MsG0180004662.01.T01:CDS 35.0%
GCAGATTACAGGATGAAATT+TGG + Chr1:80975701-80975720 None:intergenic 35.0%
GCCTGTAATTCTTCTGTAAA+TGG - Chr1:80979110-80979129 MsG0180004662.01.T01:CDS 35.0%
GCTAAACATCCAAAATGAGA+AGG + Chr1:80978376-80978395 None:intergenic 35.0%
GCTCTATACATATGGAATTG+TGG - Chr1:80974259-80974278 MsG0180004662.01.T01:CDS 35.0%
GGAATTGGATCATGTTAATG+AGG - Chr1:80973688-80973707 MsG0180004662.01.T01:intron 35.0%
GGTGAAATGGATGAGATTAA+AGG + Chr1:80973440-80973459 None:intergenic 35.0%
GTAGGTCAATTAAATTGGGA+CGG + Chr1:80975315-80975334 None:intergenic 35.0%
GTTAATGAGGATAAGAGTGA+AGG - Chr1:80973701-80973720 MsG0180004662.01.T01:intron 35.0%
TAAAGATTATGCTGCCAATG+AGG - Chr1:80976283-80976302 MsG0180004662.01.T01:intron 35.0%
TAATACCTCTGAGTGATAGA+AGG + Chr1:80973538-80973557 None:intergenic 35.0%
TACTGTCGTATGAAATCTTC+AGG + Chr1:80976014-80976033 None:intergenic 35.0%
TAGTGACCTAAATGGTGATA+TGG - Chr1:80977829-80977848 MsG0180004662.01.T01:CDS 35.0%
TATGAAATCTTCAGGGTCTA+TGG + Chr1:80976006-80976025 None:intergenic 35.0%
TATGTCGGAAACAATTAGCA+TGG - Chr1:80979036-80979055 MsG0180004662.01.T01:CDS 35.0%
TCATCCAAAGCAAATCTCAT+CGG - Chr1:80978280-80978299 MsG0180004662.01.T01:intron 35.0%
TCGAATTGATCTGTTATCTG+AGG - Chr1:80975189-80975208 MsG0180004662.01.T01:intron 35.0%
TCTAATAAGACTGCATGAGT+TGG - Chr1:80973330-80973349 MsG0180004662.01.T01:three_prime_UTR 35.0%
TCTGTGTGAAAAACCAAAGT+AGG + Chr1:80975333-80975352 None:intergenic 35.0%
TGATAGGTATAATTGAAGCC+TGG - Chr1:80976907-80976926 MsG0180004662.01.T01:intron 35.0%
TGGACAAGAACCAAATATGT+CGG - Chr1:80979021-80979040 MsG0180004662.01.T01:CDS 35.0%
TGTCAAGACAGTATCTACAA+AGG + Chr1:80973825-80973844 None:intergenic 35.0%
TTAACCAACAAGCTTTCTAC+CGG - Chr1:80975879-80975898 MsG0180004662.01.T01:intron 35.0%
TTGAAGCTTGAAAGAAGTTC+TGG + Chr1:80977462-80977481 None:intergenic 35.0%
TTGAAGTTTCACAAGAAACG+AGG - Chr1:80973389-80973408 MsG0180004662.01.T01:three_prime_UTR 35.0%
! AAATATTCTCTTTTCCAGGC+TGG - Chr1:80976687-80976706 MsG0180004662.01.T01:intron 35.0%
! AATATTCTCTTTTCCAGGCT+GGG - Chr1:80976688-80976707 MsG0180004662.01.T01:intron 35.0%
! AGTGGAATGTGTGCTTTTAT+GGG - Chr1:80976526-80976545 MsG0180004662.01.T01:intron 35.0%
! ATGAGATTTGCTTTGGATGA+TGG + Chr1:80978280-80978299 None:intergenic 35.0%
! TAGTGGAATGTGTGCTTTTA+TGG - Chr1:80976525-80976544 MsG0180004662.01.T01:intron 35.0%
! TGAGATTTGCTTTGGATGAT+GGG + Chr1:80978279-80978298 None:intergenic 35.0%
! TGATGACAGCATTTTTAACG+CGG - Chr1:80976184-80976203 MsG0180004662.01.T01:intron 35.0%
! TTGTTTTCTAACGACGGTAT+AGG - Chr1:80978738-80978757 MsG0180004662.01.T01:CDS 35.0%
!! AGTTGTTTCTGGCTTAATGA+TGG - Chr1:80975726-80975745 MsG0180004662.01.T01:intron 35.0%
!! ATCCATTAATTTGCCAACCA+AGG + Chr1:80974727-80974746 None:intergenic 35.0%
!! GTTGTTTCTGGCTTAATGAT+GGG - Chr1:80975727-80975746 MsG0180004662.01.T01:intron 35.0%
!! TATGTAGGTTTTGTCTGAAG+AGG - Chr1:80973930-80973949 MsG0180004662.01.T01:intron 35.0%
!! TCAAGCTTTATTTCTCAGCA+TGG - Chr1:80976728-80976747 MsG0180004662.01.T01:intron 35.0%
!! TCCATTAATTTGCCAACCAA+GGG + Chr1:80974726-80974745 None:intergenic 35.0%
!!! CCTGTAGGTTGTTTTTTCAT+AGG - Chr1:80973851-80973870 MsG0180004662.01.T01:intron 35.0%
!!! GAAGCCTGAGATTTTTTCTA+TGG - Chr1:80979083-80979102 MsG0180004662.01.T01:CDS 35.0%
!!! GTATTGATTTTAATCGGCAC+AGG + Chr1:80973755-80973774 None:intergenic 35.0%
AAAACCAGTTGTTAAGGGTC+TGG - Chr1:80976056-80976075 MsG0180004662.01.T01:intron 40.0%
AAAAGTGATCCAAAAGGGGA+GGG - Chr1:80977189-80977208 MsG0180004662.01.T01:intron 40.0%
AAACTACATGTCAAGGGAAC+AGG + Chr1:80975069-80975088 None:intergenic 40.0%
AAATCTCAGGCTTCTGTATC+AGG + Chr1:80979077-80979096 None:intergenic 40.0%
AACAATTGAGGAGGGAAACT+TGG + Chr1:80976471-80976490 None:intergenic 40.0%
AACCCATGTTCGAATGTCAA+AGG + Chr1:80977501-80977520 None:intergenic 40.0%
AAGAAGGAGGAATGGTGAAA+TGG + Chr1:80973453-80973472 None:intergenic 40.0%
AAGATTATGCTGCCAATGAG+GGG - Chr1:80976285-80976304 MsG0180004662.01.T01:intron 40.0%
AAGGCATAAGGCACGTAATA+AGG + Chr1:80974487-80974506 None:intergenic 40.0%
AAGTTGAGGATCCCAAGAAA+AGG + Chr1:80978601-80978620 None:intergenic 40.0%
AATGTAGACACTGAAGTAGG+AGG + Chr1:80974922-80974941 None:intergenic 40.0%
ACAAGAAACGAGGACAACTA+TGG - Chr1:80973399-80973418 MsG0180004662.01.T01:three_prime_UTR 40.0%
ACAAGGAAAGACAAGGTTGT+GGG - Chr1:80977281-80977300 MsG0180004662.01.T01:intron 40.0%
ACCCATGTTCGAATGTCAAA+GGG + Chr1:80977500-80977519 None:intergenic 40.0%
ACTATCCTTCTATCACTCAG+AGG - Chr1:80973530-80973549 MsG0180004662.01.T01:CDS 40.0%
AGAACATGAAAACCCCTCAT+TGG + Chr1:80976300-80976319 None:intergenic 40.0%
AGAGACAAGAAAAGGAGAAG+AGG + Chr1:80976795-80976814 None:intergenic 40.0%
AGATACAGCTGTGATGCATT+TGG - Chr1:80977063-80977082 MsG0180004662.01.T01:intron 40.0%
AGCAATGTAGACACTGAAGT+AGG + Chr1:80974925-80974944 None:intergenic 40.0%
AGCACTTCATCTAAGTGACA+GGG + Chr1:80974178-80974197 None:intergenic 40.0%
AGTATCCAGGCTTCATTGAT+AGG - Chr1:80977777-80977796 MsG0180004662.01.T01:intron 40.0%
ATACAGCTGTGATGCATTTG+GGG - Chr1:80977065-80977084 MsG0180004662.01.T01:intron 40.0%
ATGAACTGCTTACACTTGTC+TGG - Chr1:80978715-80978734 MsG0180004662.01.T01:CDS 40.0%
CAAAACCCCCTATTTACTTG+TGG - Chr1:80974207-80974226 MsG0180004662.01.T01:CDS 40.0%
CAACAGGTTTGTGATGGTTT+AGG + Chr1:80975918-80975937 None:intergenic 40.0%
CAAGACAGTATCTACAAAGG+CGG + Chr1:80973822-80973841 None:intergenic 40.0%
CAAGAGGCTTGAATGAATCA+AGG + Chr1:80974652-80974671 None:intergenic 40.0%
CAATCCATTAGCAACTACCA+AGG + Chr1:80976884-80976903 None:intergenic 40.0%
CACATGTCATATGATGTCGT+AGG - Chr1:80978229-80978248 MsG0180004662.01.T01:intron 40.0%
CATCCAAAGCAAATCTCATC+GGG - Chr1:80978281-80978300 MsG0180004662.01.T01:intron 40.0%
CATGTCATATGATGTCGTAG+GGG - Chr1:80978231-80978250 MsG0180004662.01.T01:intron 40.0%
CCTAAATGGTCCCTTTCTTT+GGG - Chr1:80976225-80976244 MsG0180004662.01.T01:intron 40.0%
CTTATTGATGTTTGTGTGGC+TGG - Chr1:80974512-80974531 MsG0180004662.01.T01:intron 40.0%
GAAAAAACAACCTACAGGCA+AGG + Chr1:80973849-80973868 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG - Chr1:80975503-80975522 MsG0180004662.01.T01:intron 40.0%
GAAACCAATACGACAAACCA+TGG + Chr1:80974955-80974974 None:intergenic 40.0%
GAAAGAAGCTTCCCAAAGAA+AGG + Chr1:80976239-80976258 None:intergenic 40.0%
GAATTCCTATCAATGAAGCC+TGG + Chr1:80977785-80977804 None:intergenic 40.0%
GATACAGCTGTGATGCATTT+GGG - Chr1:80977064-80977083 MsG0180004662.01.T01:intron 40.0%
GATACTCCTAGGTCATATCT+AGG - Chr1:80976989-80977008 MsG0180004662.01.T01:intron 40.0%
GCTGTTGCTGTATATATGAG+TGG - Chr1:80976750-80976769 MsG0180004662.01.T01:intron 40.0%
GCTTGAATGAATCAAGGCAA+TGG + Chr1:80974646-80974665 None:intergenic 40.0%
GGTGGAAAACCAGTTGTTAA+GGG - Chr1:80976051-80976070 MsG0180004662.01.T01:intron 40.0%
GTAAGCCTGTAGAACAATTG+AGG + Chr1:80976483-80976502 None:intergenic 40.0%
GTCAATTAAATTGGGACGGA+GGG + Chr1:80975311-80975330 None:intergenic 40.0%
TAAAAGTGATCCAAAAGGGG+AGG - Chr1:80977188-80977207 MsG0180004662.01.T01:intron 40.0%
TCCACTAAATCCTCCAATGA+TGG + Chr1:80976512-80976531 None:intergenic 40.0%
TCCATCATTGGAGGATTTAG+TGG - Chr1:80976508-80976527 MsG0180004662.01.T01:intron 40.0%
TCCCTTGGTTGGCAAATTAA+TGG - Chr1:80974722-80974741 MsG0180004662.01.T01:intron 40.0%
TCCTAAATGGTCCCTTTCTT+TGG - Chr1:80976224-80976243 MsG0180004662.01.T01:intron 40.0%
TCTTGTGAAACTTCAAGCTG+TGG + Chr1:80973385-80973404 None:intergenic 40.0%
TGGTGGAAAACCAGTTGTTA+AGG - Chr1:80976050-80976069 MsG0180004662.01.T01:intron 40.0%
TTACATCCATCCATCATTGG+AGG - Chr1:80976499-80976518 MsG0180004662.01.T01:intron 40.0%
TTATGGGACAAGGAAAGACA+AGG - Chr1:80977274-80977293 MsG0180004662.01.T01:intron 40.0%
TTCATCGAATGATCTGCAAC+AGG + Chr1:80975934-80975953 None:intergenic 40.0%
TTGGACTTCTTGAATTGGCT+GGG - Chr1:80977343-80977362 MsG0180004662.01.T01:intron 40.0%
TTGTCTCTTCTATCAGTGGT+TGG - Chr1:80978400-80978419 MsG0180004662.01.T01:intron 40.0%
TTTCTTGGGATCCTCAACTT+TGG - Chr1:80978601-80978620 MsG0180004662.01.T01:CDS 40.0%
! AATGTGTGCTTTTATGGGTG+TGG - Chr1:80976531-80976550 MsG0180004662.01.T01:intron 40.0%
! ATATTCTCTTTTCCAGGCTG+GGG - Chr1:80976689-80976708 MsG0180004662.01.T01:intron 40.0%
! ATCGAAGTGTGTGTGTTTTG+TGG + Chr1:80973250-80973269 None:intergenic 40.0%
! CAAATTTTGTGGAGCAGCTT+TGG - Chr1:80974601-80974620 MsG0180004662.01.T01:intron 40.0%
! CACAAGTAAATAGGGGGTTT+TGG + Chr1:80974209-80974228 None:intergenic 40.0%
! CTAAATCCTCCAATGATGGA+TGG + Chr1:80976508-80976527 None:intergenic 40.0%
! CTACAGATTTTATCACGGCT+AGG - Chr1:80978205-80978224 MsG0180004662.01.T01:intron 40.0%
! GCAAACGATCCTTCTCATTT+TGG - Chr1:80978364-80978383 MsG0180004662.01.T01:intron 40.0%
! GGACCGAGAAGTATAAAAGT+AGG + Chr1:80975239-80975258 None:intergenic 40.0%
! TATTGAGAAGCTTTGTGGTG+TGG - Chr1:80974984-80975003 MsG0180004662.01.T01:intron 40.0%
! TGAGCCTTGTAAAATCAAGC+AGG - Chr1:80974805-80974824 MsG0180004662.01.T01:intron 40.0%
! TGGTGTTGGACTTCTTGAAT+TGG - Chr1:80977338-80977357 MsG0180004662.01.T01:intron 40.0%
! TTTTCTAACGACGGTATAGG+AGG - Chr1:80978741-80978760 MsG0180004662.01.T01:CDS 40.0%
!! AAGTTCTGGCTCTACTGAAT+TGG + Chr1:80977448-80977467 None:intergenic 40.0%
!! GAAATGTAACAGACTTGCTG+CGG - Chr1:80979255-80979274 MsG0180004662.01.T01:five_prime_UTR 40.0%
!! GTCTGGTTGTTTTCTAACGA+CGG - Chr1:80978732-80978751 MsG0180004662.01.T01:CDS 40.0%
!! TAGGAGTATCGTATGAGTGT+CGG + Chr1:80976979-80976998 None:intergenic 40.0%
!! TATAATTGTTGGTGGTCCCT+TGG - Chr1:80974707-80974726 MsG0180004662.01.T01:intron 40.0%
!! TTGTCGTATTGGTTTCAGCT+GGG - Chr1:80974959-80974978 MsG0180004662.01.T01:intron 40.0%
!! TTTGTCGTATTGGTTTCAGC+TGG - Chr1:80974958-80974977 MsG0180004662.01.T01:intron 40.0%
!!! AGGCTTTTTTGTTCGTCTGT+TGG + Chr1:80978460-80978479 None:intergenic 40.0%
!!! GGACCGAGGATTAGTTTTTT+AGG - Chr1:80976429-80976448 MsG0180004662.01.T01:CDS 40.0%
AACATTCGTGTCTTCGACTC+TGG - Chr1:80976558-80976577 MsG0180004662.01.T01:intron 45.0%
AACTTCAGATGTGCCTAGCT+TGG - Chr1:80974417-80974436 MsG0180004662.01.T01:intron 45.0%
AATGCTGTCATCAAACTGCC+TGG + Chr1:80976177-80976196 None:intergenic 45.0%
ACATGTTCTTGCAGCTACTC+CGG - Chr1:80973957-80973976 MsG0180004662.01.T01:intron 45.0%
ACCCAACAGTCTTTGCAACA+AGG + Chr1:80979000-80979019 None:intergenic 45.0%
AGCCTGTAGAACAATTGAGG+AGG + Chr1:80976480-80976499 None:intergenic 45.0%
AGCTGCTGATAGTAACTGAG+TGG + Chr1:80974875-80974894 None:intergenic 45.0%
AGGTTTGTGATGGTTTAGGC+CGG + Chr1:80975914-80975933 None:intergenic 45.0%
ATCCAAAAGGGGAGGGAATT+TGG - Chr1:80977196-80977215 MsG0180004662.01.T01:intron 45.0%
ATGCGAGAAAGAAGGAGGAA+TGG + Chr1:80973461-80973480 None:intergenic 45.0%
ATGCTCCCTAGATATGACCT+AGG + Chr1:80976998-80977017 None:intergenic 45.0%
CACAGCTGACAGGAGTTAAT+AGG - Chr1:80975131-80975150 MsG0180004662.01.T01:intron 45.0%
CAGCATGGATGTTCTGTAGA+TGG - Chr1:80978425-80978444 MsG0180004662.01.T01:intron 45.0%
CCCAAAGAAAGGGACCATTT+AGG + Chr1:80976228-80976247 None:intergenic 45.0%
CCTCGGTCCCAAATAAAACA+AGG + Chr1:80976418-80976437 None:intergenic 45.0%
CGATAGCGTAATCTCGAAGA+AGG + Chr1:80973487-80973506 None:intergenic 45.0%
CTATTAACTCCTGTCAGCTG+TGG + Chr1:80975133-80975152 None:intergenic 45.0%
CTTCAAGCTGTGGAACTTGA+AGG + Chr1:80973375-80973394 None:intergenic 45.0%
GACAACAAGATCACCAAGCT+AGG + Chr1:80974433-80974452 None:intergenic 45.0%
GACAAGGAAAGACAAGGTTG+TGG - Chr1:80977280-80977299 MsG0180004662.01.T01:intron 45.0%
GACACTCATACGATACTCCT+AGG - Chr1:80976978-80976997 MsG0180004662.01.T01:intron 45.0%
GAGCACTTCATCTAAGTGAC+AGG + Chr1:80974179-80974198 None:intergenic 45.0%
GATCTGCAACAGGTTTGTGA+TGG + Chr1:80975924-80975943 None:intergenic 45.0%
GCAGATGACACCCTTAGTAA+AGG - Chr1:80978823-80978842 MsG0180004662.01.T01:CDS 45.0%
GCATCAGATGCTGACAGTAT+AGG - Chr1:80975960-80975979 MsG0180004662.01.T01:CDS 45.0%
GCCCTTTGACATTCGAACAT+GGG - Chr1:80977496-80977515 MsG0180004662.01.T01:intron 45.0%
GCCTGTAGAACAATTGAGGA+GGG + Chr1:80976479-80976498 None:intergenic 45.0%
GGCTTACATCCATCCATCAT+TGG - Chr1:80976496-80976515 MsG0180004662.01.T01:intron 45.0%
GGGCGCAAATTATCCAAACT+GGG - Chr1:80978251-80978270 MsG0180004662.01.T01:intron 45.0%
GGTCAATTAAATTGGGACGG+AGG + Chr1:80975312-80975331 None:intergenic 45.0%
GGTTTATTTCCACAGCTGAC+AGG - Chr1:80975121-80975140 MsG0180004662.01.T01:intron 45.0%
GTCGGAAACAATTAGCATGG+TGG - Chr1:80979039-80979058 MsG0180004662.01.T01:CDS 45.0%
GTTGGACTTCTTGAATTGGC+TGG - Chr1:80977342-80977361 MsG0180004662.01.T01:intron 45.0%
TCCCTCCTCAATTGTTCTAC+AGG - Chr1:80976475-80976494 MsG0180004662.01.T01:intron 45.0%
TCGACTCTGGTCAAGCAATT+TGG - Chr1:80976571-80976590 MsG0180004662.01.T01:intron 45.0%
TGAATCAAGGCAATGGCAGA+AGG + Chr1:80974639-80974658 None:intergenic 45.0%
TGCCCTTTGACATTCGAACA+TGG - Chr1:80977495-80977514 MsG0180004662.01.T01:intron 45.0%
TTCAGGGTCTATGGGAAGAT+CGG + Chr1:80975997-80976016 None:intergenic 45.0%
! AACCAAATTCCCTCCCCTTT+TGG + Chr1:80977201-80977220 None:intergenic 45.0%
! AAGCTTTGTGGTGTGGCTTT+GGG - Chr1:80974991-80975010 MsG0180004662.01.T01:intron 45.0%
! ACAGCATTTTTAACGCGGCA+TGG - Chr1:80976189-80976208 MsG0180004662.01.T01:intron 45.0%
! ACAGCCTTGGTAGTTGCTAA+TGG - Chr1:80976877-80976896 MsG0180004662.01.T01:intron 45.0%
! AGAAGTTGCTGTTGCAAGTC+TGG - Chr1:80978309-80978328 MsG0180004662.01.T01:intron 45.0%
! AGTCCCGATGAGATTTGCTT+TGG + Chr1:80978287-80978306 None:intergenic 45.0%
! GCCTTGTTGCAAAGACTGTT+GGG - Chr1:80978996-80979015 MsG0180004662.01.T01:intron 45.0%
! GGTGGGTTTCTTCACTAAAG+TGG - Chr1:80974683-80974702 MsG0180004662.01.T01:intron 45.0%
! TGAGTTGGACGAAACCTAAC+TGG - Chr1:80973345-80973364 MsG0180004662.01.T01:three_prime_UTR 45.0%
! TGCCTTGTTGCAAAGACTGT+TGG - Chr1:80978995-80979014 MsG0180004662.01.T01:intron 45.0%
!! ATAGCTGGAGCATTGCTGTT+TGG - Chr1:80975664-80975683 MsG0180004662.01.T01:intron 45.0%
!! GAAGGTTGATGCGAGAAAGA+AGG + Chr1:80973469-80973488 None:intergenic 45.0%
!! TGTCGTATTGGTTTCAGCTG+GGG - Chr1:80974960-80974979 MsG0180004662.01.T01:intron 45.0%
!!! AGCAGCTTTGGACTTTTGCT+TGG - Chr1:80974613-80974632 MsG0180004662.01.T01:intron 45.0%
!!! CCTTGTTTTATTTGGGACCG+AGG - Chr1:80976415-80976434 MsG0180004662.01.T01:CDS 45.0%
AACGCCGGTAGAAAGCTTGT+TGG + Chr1:80975886-80975905 None:intergenic 50.0%
AAGAAACCCACCACAGCAAC+TGG + Chr1:80974675-80974694 None:intergenic 50.0%
AATTGATACTCCCTCCGTCC+CGG + Chr1:80975524-80975543 None:intergenic 50.0%
ACCCTGCTGGGTTATATGGT+GGG - Chr1:80973983-80974002 MsG0180004662.01.T01:intron 50.0%
AGACACTGAAGTAGGAGGCA+CGG + Chr1:80974917-80974936 None:intergenic 50.0%
ATCCCACCATATAACCCAGC+AGG + Chr1:80973988-80974007 None:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - Chr1:80975507-80975526 MsG0180004662.01.T01:intron 50.0%
CCTTCCTGCTAGTATTGCGT+GGG - Chr1:80976122-80976141 MsG0180004662.01.T01:intron 50.0%
CTAACGACGGTATAGGAGGA+CGG - Chr1:80978745-80978764 MsG0180004662.01.T01:CDS 50.0%
CTACATTGCTTCTGCGTCCA+TGG - Chr1:80974935-80974954 MsG0180004662.01.T01:intron 50.0%
CTGGCAGAGTCTCTAATGCT+TGG - Chr1:80978328-80978347 MsG0180004662.01.T01:intron 50.0%
CTTACGTTGGTGCAGCTTGT+TGG - Chr1:80974332-80974351 MsG0180004662.01.T01:intron 50.0%
CTTTGCAACAAGGCAGCTAG+TGG + Chr1:80978990-80979009 None:intergenic 50.0%
GCAATACTAGCAGGAAGGAC+TGG + Chr1:80976120-80976139 None:intergenic 50.0%
GCTTCCAGACCCTTAACAAC+TGG + Chr1:80976063-80976082 None:intergenic 50.0%
GGGGCGCAAATTATCCAAAC+TGG - Chr1:80978250-80978269 MsG0180004662.01.T01:intron 50.0%
GGGGCTATTGAGAAGCTTTG+TGG - Chr1:80974979-80974998 MsG0180004662.01.T01:intron 50.0%
GGTCTGGAAGCTATCAAGCT+CGG - Chr1:80976072-80976091 MsG0180004662.01.T01:intron 50.0%
GGTTGCAAATGAGCGTGACT+GGG - Chr1:80975014-80975033 MsG0180004662.01.T01:intron 50.0%
GTCTTGACATCCTTGCCTGT+AGG - Chr1:80973836-80973855 MsG0180004662.01.T01:intron 50.0%
GTGATCGTCACCTACTGATG+TGG - Chr1:80977627-80977646 MsG0180004662.01.T01:CDS 50.0%
GTTGCAAAGACTGTTGGGTG+TGG - Chr1:80979001-80979020 MsG0180004662.01.T01:intron 50.0%
TAACGACGGTATAGGAGGAC+GGG - Chr1:80978746-80978765 MsG0180004662.01.T01:CDS 50.0%
TCCCACCATATAACCCAGCA+GGG + Chr1:80973987-80974006 None:intergenic 50.0%
TCCTTCCTGCTAGTATTGCG+TGG - Chr1:80976121-80976140 MsG0180004662.01.T01:intron 50.0%
TCTCAGGCTTCTGTATCAGG+TGG + Chr1:80979074-80979093 None:intergenic 50.0%
TTTCTACCGGCGTTCTTGAC+CGG - Chr1:80975892-80975911 MsG0180004662.01.T01:intron 50.0%
TTTGCTTGTGCAAGTGCGAC+TGG + Chr1:80975157-80975176 None:intergenic 50.0%
! AGCTTTGTGGTGTGGCTTTG+GGG - Chr1:80974992-80975011 MsG0180004662.01.T01:intron 50.0%
! GAAGCTTTGTGGTGTGGCTT+TGG - Chr1:80974990-80975009 MsG0180004662.01.T01:intron 50.0%
! GCGTCCATGGTTTGTCGTAT+TGG - Chr1:80974948-80974967 MsG0180004662.01.T01:intron 50.0%
! GGTTGATGCGAGAAAGAAGG+AGG + Chr1:80973466-80973485 None:intergenic 50.0%
! TATCAGTGGTTGGTGCAGCA+TGG - Chr1:80978410-80978429 MsG0180004662.01.T01:intron 50.0%
!! ACAGACTTGCTGCGGAATTG+TGG - Chr1:80979263-80979282 MsG0180004662.01.T01:five_prime_UTR 50.0%
!! ATTGTTGGTGGTCCCTTGGT+TGG - Chr1:80974711-80974730 MsG0180004662.01.T01:intron 50.0%
!! CTCGGCTGGAAAGAGTATCT+TGG - Chr1:80976090-80976109 MsG0180004662.01.T01:intron 50.0%
!! TGGATGATGGGATCCCAGTT+TGG + Chr1:80978267-80978286 None:intergenic 50.0%
AACGACGGTATAGGAGGACG+GGG - Chr1:80978747-80978766 MsG0180004662.01.T01:CDS 55.0%
AAGCCTCTTGCCAGTTGCTG+TGG - Chr1:80974662-80974681 MsG0180004662.01.T01:intron 55.0%
AGCACCCACGCAATACTAGC+AGG + Chr1:80976129-80976148 None:intergenic 55.0%
CACCCTGCTGGGTTATATGG+TGG - Chr1:80973982-80974001 MsG0180004662.01.T01:intron 55.0%
CCCACGCAATACTAGCAGGA+AGG + Chr1:80976125-80976144 None:intergenic 55.0%
CGCGCTGCGTATAAGTATCC+AGG - Chr1:80977764-80977783 MsG0180004662.01.T01:intron 55.0%
CTCTTGCCAGTTGCTGTGGT+GGG - Chr1:80974666-80974685 MsG0180004662.01.T01:intron 55.0%
GCACACCCTGCTGGGTTATA+TGG - Chr1:80973979-80973998 MsG0180004662.01.T01:intron 55.0%
GCAGCGCGTATGATGCAATG+TGG + Chr1:80977752-80977771 None:intergenic 55.0%
GGGGAGGGAATTTGGTTGTG+TGG - Chr1:80977204-80977223 MsG0180004662.01.T01:intron 55.0%
GGGTTGCAAATGAGCGTGAC+TGG - Chr1:80975013-80975032 MsG0180004662.01.T01:intron 55.0%
GTCAGTTATTCCGGGACGGA+GGG - Chr1:80975511-80975530 MsG0180004662.01.T01:intron 55.0%
TATAACCCAGCAGGGTGTGC+CGG + Chr1:80973979-80973998 None:intergenic 55.0%
TGGAAGCTATCAAGCTCGGC+TGG - Chr1:80976076-80976095 MsG0180004662.01.T01:intron 55.0%
TTTAGGCCGGTCAAGAACGC+CGG + Chr1:80975901-80975920 None:intergenic 55.0%
! TTTTCCAGGCTGGGGCAGTT+GGG - Chr1:80976697-80976716 MsG0180004662.01.T01:intron 55.0%
!! GCTTTGTGGTGTGGCTTTGG+GGG - Chr1:80974993-80975012 MsG0180004662.01.T01:intron 55.0%
ACGACGGTATAGGAGGACGG+GGG - Chr1:80978748-80978767 MsG0180004662.01.T01:CDS 60.0%
CCACCACAGCAACTGGCAAG+AGG + Chr1:80974668-80974687 None:intergenic 60.0%
CCTCTTGCCAGTTGCTGTGG+TGG - Chr1:80974665-80974684 MsG0180004662.01.T01:intron 60.0%
GGTCAGTTATTCCGGGACGG+AGG - Chr1:80975510-80975529 MsG0180004662.01.T01:intron 60.0%
GTATAGGAGGACGGGGGGAA+GGG - Chr1:80978754-80978773 MsG0180004662.01.T01:CDS 60.0%
TGAGCGTGACTGGGTTGTGC+TGG - Chr1:80975023-80975042 MsG0180004662.01.T01:intron 60.0%
! CTTTTCCAGGCTGGGGCAGT+TGG - Chr1:80976696-80976715 MsG0180004662.01.T01:intron 60.0%
CGACGGTATAGGAGGACGGG+GGG - Chr1:80978749-80978768 MsG0180004662.01.T01:CDS 65.0%
CTACTCCGGCACACCCTGCT+GGG - Chr1:80973971-80973990 MsG0180004662.01.T01:intron 65.0%
GGTATAGGAGGACGGGGGGA+AGG - Chr1:80978753-80978772 MsG0180004662.01.T01:CDS 65.0%
CCAACCCAACTGCCCCAGCC+TGG + Chr1:80976704-80976723 None:intergenic 70.0%
CCAGGCTGGGGCAGTTGGGT+TGG - Chr1:80976701-80976720 MsG0180004662.01.T01:intron 70.0%
GCTACTCCGGCACACCCTGC+TGG - Chr1:80973970-80973989 MsG0180004662.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 80973137 80979420 80973137 ID=MsG0180004662.01;Name=MsG0180004662.01
Chr1 mRNA 80973137 80979420 80973137 ID=MsG0180004662.01.T01;Parent=MsG0180004662.01;Name=MsG0180004662.01.T01;_AED=0.48;_eAED=0.48;_QI=281|0.75|0.76|1|1|1|13|329|578
Chr1 exon 80973137 80973580 80973137 ID=MsG0180004662.01.T01:exon:34328;Parent=MsG0180004662.01.T01
Chr1 exon 80974111 80974346 80974111 ID=MsG0180004662.01.T01:exon:34327;Parent=MsG0180004662.01.T01
Chr1 exon 80975739 80975852 80975739 ID=MsG0180004662.01.T01:exon:34326;Parent=MsG0180004662.01.T01
Chr1 exon 80975954 80976060 80975954 ID=MsG0180004662.01.T01:exon:34325;Parent=MsG0180004662.01.T01
Chr1 exon 80976347 80976493 80976347 ID=MsG0180004662.01.T01:exon:34324;Parent=MsG0180004662.01.T01
Chr1 exon 80976576 80976693 80976576 ID=MsG0180004662.01.T01:exon:34323;Parent=MsG0180004662.01.T01
Chr1 exon 80976792 80976893 80976792 ID=MsG0180004662.01.T01:exon:34322;Parent=MsG0180004662.01.T01
Chr1 exon 80977347 80977421 80977347 ID=MsG0180004662.01.T01:exon:34321;Parent=MsG0180004662.01.T01
Chr1 exon 80977513 80977689 80977513 ID=MsG0180004662.01.T01:exon:34320;Parent=MsG0180004662.01.T01
Chr1 exon 80977829 80977967 80977829 ID=MsG0180004662.01.T01:exon:34319;Parent=MsG0180004662.01.T01
Chr1 exon 80978565 80978620 80978565 ID=MsG0180004662.01.T01:exon:34318;Parent=MsG0180004662.01.T01
Chr1 exon 80978704 80978920 80978704 ID=MsG0180004662.01.T01:exon:34317;Parent=MsG0180004662.01.T01
Chr1 exon 80979006 80979420 80979006 ID=MsG0180004662.01.T01:exon:34316;Parent=MsG0180004662.01.T01
Chr1 five_prime_UTR 80979140 80979420 80979140 ID=MsG0180004662.01.T01:five_prime_utr;Parent=MsG0180004662.01.T01
Chr1 CDS 80979006 80979139 80979006 ID=MsG0180004662.01.T01:cds;Parent=MsG0180004662.01.T01
Chr1 CDS 80978704 80978920 80978704 ID=MsG0180004662.01.T01:cds;Parent=MsG0180004662.01.T01
Chr1 CDS 80978565 80978620 80978565 ID=MsG0180004662.01.T01:cds;Parent=MsG0180004662.01.T01
Chr1 CDS 80977829 80977967 80977829 ID=MsG0180004662.01.T01:cds;Parent=MsG0180004662.01.T01
Chr1 CDS 80977513 80977689 80977513 ID=MsG0180004662.01.T01:cds;Parent=MsG0180004662.01.T01
Chr1 CDS 80977347 80977421 80977347 ID=MsG0180004662.01.T01:cds;Parent=MsG0180004662.01.T01
Chr1 CDS 80976792 80976893 80976792 ID=MsG0180004662.01.T01:cds;Parent=MsG0180004662.01.T01
Chr1 CDS 80976576 80976693 80976576 ID=MsG0180004662.01.T01:cds;Parent=MsG0180004662.01.T01
Chr1 CDS 80976347 80976493 80976347 ID=MsG0180004662.01.T01:cds;Parent=MsG0180004662.01.T01
Chr1 CDS 80975954 80976060 80975954 ID=MsG0180004662.01.T01:cds;Parent=MsG0180004662.01.T01
Chr1 CDS 80975739 80975852 80975739 ID=MsG0180004662.01.T01:cds;Parent=MsG0180004662.01.T01
Chr1 CDS 80974111 80974346 80974111 ID=MsG0180004662.01.T01:cds;Parent=MsG0180004662.01.T01
Chr1 CDS 80973466 80973580 80973466 ID=MsG0180004662.01.T01:cds;Parent=MsG0180004662.01.T01
Chr1 three_prime_UTR 80973137 80973465 80973137 ID=MsG0180004662.01.T01:three_prime_utr;Parent=MsG0180004662.01.T01
Gene Sequence

>MsG0180004662.01.T01

ATGGTTATTGCTTCGCCCTCCTTTAATCTCATCCATTTCACCATTCCTCCTTCTTTCTCGCATCAACCTTCTTCGAGATTACGCTATCGCTGTAAACGATTAAACCTCAATTACTATCCTTCTATCACTCAGAGATTTGCGTGTATAAGTTCGAGATGTTCAATAACGAATACTGATATACAATTGGAATTGGATCATGTTAATGAGGATAAGAGTGAAGGAACGTGTTCAATTGTTGAACAAGAATGTCCTGTGCCGATTAAAATCAATACTGATATTCTGGTGGAGAATGATTCTTTGAATTTACTCTCTGAAACCGCCTTTGTAGATACTGTCTTGACATCCTTGCCTGTTTTGTCTGAAGAGGAACAACATGTTCTTGCAGCTACTCCGGCACACCCTGCTGGTTGCATTGTTGCAAATTTTGTGGAGCAGCTTTGGACTTTTGCTTGGCCTTCTGCCATTGCCTTGATTCATTCAAGCCTCTTGCCAGTTGCTGTGGTGGGTTTCTTCACTAAAGTGGCTATAATTGTTGGTGGTCCCTTGGCAGCCACTCAGTTACTATCAGCAGCTATGATTATACATGCTCATTCCGTGCCTCCTACTTCAGTGTCTACATTGCTTCTGCGTCCATGGTTTGTCGTATTGGTTTCAGCTGGGGCTATTGAGAAGCTTTGTGGTGTGGCTTTGGGGGTTGCAAATGAGCGTGACTGGGTTGTGCTGCTGACAGGAGTTAATAGGCCAGTCGCACTTGCACAAGCAAATGCTGTTCTAAATCGAATTGATCTGTTATCTGAGATAGCTGGAGCATTGCTGTTTGGAGTCCTTCTTTCCAAATTTCATCCTGTAATCTGCTTAAAAGTTGTTTCTGGCTTAATGATGGGACTGCTGCCTGTTACAATTATTTTAACATGTTTAACCAACAAGCTTTCTACCGGCGTTCTTGACCGGCCTAAACCATCACAAACCTGTTGCAGATCATTCGATGAATATTCTGCATCAGATGCTGACAGTATAGTTGTTAAGGGTCTGGAAGCTATCAAGCTCGGCTGGAAAGAGTATCTTGGTCAGCCAGTCCTTCCTGCTAGTATTGCGTGGGTGCTTCTCTACTTCAATATTGTTCTTACACCAGGCAGTTTGATGACAGCATTTTTAACGCGGCATGGCTTACATCCATCCATCATTGGAGGATTTAGTGGAATGTGTGCTTTTATGGGTGTGGCAGCAACATTCGTGTCTTCGACTCTGGTCAAGCAATTTGGCATTTTAAAGGCTGGGGCAGTTGGGTTGGTGTTTCAAGCTTTATTTCTCAGCATGGCTGTTGCTGTATATATGAGTGGATCAATATCACATCAGAGTCCTCTTCTCCTTTTCTTGTCTCTGATTATTTTATCACGGCTAGGACACATGTCATATGATGTCGTAGGGGCGCAAATTATCCAAACTGGGATCCCATCATCCAAAGCAAATCTCATCGGGACTACAGAAGTTGCTGTTGCAAGTCTGGCAGAGTCTCTAATGCTTGGTGTTGCAATAATCGCAAACGATCCTTCTCATTTTGGATGTTTAGCAATGTTGTCTCTTCTATCAGTGGTTGGTGCAGCATGGATGTTCTGTAGATGTTGTTCTGTTCCACTAGCTGCCTTGTTGCAAAGACTGTTGGGTGTGGACAAGAACCAAATATGTCGGAAACAATTAGCATGGTGGATGATTTATCCACCTGATACAGAAGCCTGA

Protein sequence

>MsG0180004662.01.T01

MVIASPSFNLIHFTIPPSFSHQPSSRLRYRCKRLNLNYYPSITQRFACISSRCSITNTDIQLELDHVNEDKSEGTCSIVEQECPVPIKINTDILVENDSLNLLSETAFVDTVLTSLPVLSEEEQHVLAATPAHPAGCIVANFVEQLWTFAWPSAIALIHSSLLPVAVVGFFTKVAIIVGGPLAATQLLSAAMIIHAHSVPPTSVSTLLLRPWFVVLVSAGAIEKLCGVALGVANERDWVVLLTGVNRPVALAQANAVLNRIDLLSEIAGALLFGVLLSKFHPVICLKVVSGLMMGLLPVTIILTCLTNKLSTGVLDRPKPSQTCCRSFDEYSASDADSIVVKGLEAIKLGWKEYLGQPVLPASIAWVLLYFNIVLTPGSLMTAFLTRHGLHPSIIGGFSGMCAFMGVAATFVSSTLVKQFGILKAGAVGLVFQALFLSMAVAVYMSGSISHQSPLLLFLSLIILSRLGHMSYDVVGAQIIQTGIPSSKANLIGTTEVAVASLAESLMLGVAIIANDPSHFGCLAMLSLLSVVGAAWMFCRCCSVPLAALLQRLLGVDKNQICRKQLAWWMIYPPDTEA*