AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047767.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047767.01.T02 MTR_4g134380 94.298 228 11 1 1 228 1 226 1.70e-161 445
MsG0880047767.01.T02 MTR_4g134370 86.425 221 27 1 11 228 6 226 6.59e-142 396
MsG0880047767.01.T02 MTR_4g134380 92.655 177 11 1 1 177 1 175 3.07e-120 339
MsG0880047767.01.T02 MTR_4g134360 88.889 126 11 1 20 145 16 138 3.83e-77 229
MsG0880047767.01.T02 MTR_2g070210 30.047 213 130 8 17 222 4 204 7.98e-16 73.9
MsG0880047767.01.T02 MTR_2g070150 32.164 171 97 5 17 183 4 159 3.07e-15 72.0
MsG0880047767.01.T02 MTR_2g070180 30.588 170 101 5 17 183 4 159 2.17e-14 70.1
MsG0880047767.01.T02 MTR_4g124130 32.941 170 102 5 15 183 2 160 2.67e-14 69.7
MsG0880047767.01.T02 MTR_2g070200 31.765 170 100 4 17 183 4 160 1.13e-13 68.2
MsG0880047767.01.T02 MTR_3g064700 30.348 201 121 5 20 204 5 202 1.53e-13 67.4
MsG0880047767.01.T02 MTR_3g450930 31.953 169 100 5 27 186 11 173 3.87e-13 66.6
MsG0880047767.01.T02 MTR_8g061950 28.767 219 128 9 20 223 8 213 6.88e-13 66.2
MsG0880047767.01.T02 MTR_7g065660 30.435 207 112 8 31 224 21 208 9.07e-13 65.5
MsG0880047767.01.T02 MTR_5g090910 32.075 159 100 5 31 183 15 171 2.16e-12 64.3
MsG0880047767.01.T02 MTR_2g070140 32.278 158 88 5 30 183 1 143 4.38e-12 63.5
MsG0880047767.01.T02 MTR_7g065720 26.214 206 123 7 31 224 21 209 6.04e-12 63.2
MsG0880047767.01.T02 MTR_1g088845 26.786 168 112 3 26 186 12 175 7.95e-12 62.8
MsG0880047767.01.T02 MTR_3g450790 30.380 158 95 5 31 179 15 166 9.94e-12 62.8
MsG0880047767.01.T02 MTR_3g467420 31.214 173 100 6 15 183 7 164 1.05e-11 62.8
MsG0880047767.01.T02 MTR_0186s0030 36.170 94 56 2 16 108 3 93 1.77e-11 60.5
MsG0880047767.01.T02 MTR_2g070130 29.240 171 102 6 17 183 4 159 2.27e-11 61.6
MsG0880047767.01.T02 MTR_5g090920 31.515 165 93 5 31 183 15 171 2.98e-11 61.2
MsG0880047767.01.T02 MTR_8g056940 28.070 171 106 5 16 183 3 159 3.45e-11 61.2
MsG0880047767.01.T02 MTR_2g070120 29.412 170 103 6 17 183 4 159 3.92e-11 60.8
MsG0880047767.01.T02 MTR_7g065230 26.667 210 135 7 15 220 5 199 8.16e-11 60.1
MsG0880047767.01.T01 MTR_4g134380 94.298 228 11 1 1 228 1 226 1.70e-161 445
MsG0880047767.01.T01 MTR_4g134370 86.425 221 27 1 11 228 6 226 6.59e-142 396
MsG0880047767.01.T01 MTR_4g134380 92.655 177 11 1 1 177 1 175 3.07e-120 339
MsG0880047767.01.T01 MTR_4g134360 88.889 126 11 1 20 145 16 138 3.83e-77 229
MsG0880047767.01.T01 MTR_2g070210 30.047 213 130 8 17 222 4 204 7.98e-16 73.9
MsG0880047767.01.T01 MTR_2g070150 32.164 171 97 5 17 183 4 159 3.07e-15 72.0
MsG0880047767.01.T01 MTR_2g070180 30.588 170 101 5 17 183 4 159 2.17e-14 70.1
MsG0880047767.01.T01 MTR_4g124130 32.941 170 102 5 15 183 2 160 2.67e-14 69.7
MsG0880047767.01.T01 MTR_2g070200 31.765 170 100 4 17 183 4 160 1.13e-13 68.2
MsG0880047767.01.T01 MTR_3g064700 30.348 201 121 5 20 204 5 202 1.53e-13 67.4
MsG0880047767.01.T01 MTR_3g450930 31.953 169 100 5 27 186 11 173 3.87e-13 66.6
MsG0880047767.01.T01 MTR_8g061950 28.767 219 128 9 20 223 8 213 6.88e-13 66.2
MsG0880047767.01.T01 MTR_7g065660 30.435 207 112 8 31 224 21 208 9.07e-13 65.5
MsG0880047767.01.T01 MTR_5g090910 32.075 159 100 5 31 183 15 171 2.16e-12 64.3
MsG0880047767.01.T01 MTR_2g070140 32.278 158 88 5 30 183 1 143 4.38e-12 63.5
MsG0880047767.01.T01 MTR_7g065720 26.214 206 123 7 31 224 21 209 6.04e-12 63.2
MsG0880047767.01.T01 MTR_1g088845 26.786 168 112 3 26 186 12 175 7.95e-12 62.8
MsG0880047767.01.T01 MTR_3g450790 30.380 158 95 5 31 179 15 166 9.94e-12 62.8
MsG0880047767.01.T01 MTR_3g467420 31.214 173 100 6 15 183 7 164 1.05e-11 62.8
MsG0880047767.01.T01 MTR_0186s0030 36.170 94 56 2 16 108 3 93 1.77e-11 60.5
MsG0880047767.01.T01 MTR_2g070130 29.240 171 102 6 17 183 4 159 2.27e-11 61.6
MsG0880047767.01.T01 MTR_5g090920 31.515 165 93 5 31 183 15 171 2.98e-11 61.2
MsG0880047767.01.T01 MTR_8g056940 28.070 171 106 5 16 183 3 159 3.45e-11 61.2
MsG0880047767.01.T01 MTR_2g070120 29.412 170 103 6 17 183 4 159 3.92e-11 60.8
MsG0880047767.01.T01 MTR_7g065230 26.667 210 135 7 15 220 5 199 8.16e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047767.01.T02 AT2G02380 61.751 217 82 1 10 226 4 219 3.94e-97 283
MsG0880047767.01.T02 AT2G02390 61.792 212 80 1 15 226 6 216 4.08e-94 275
MsG0880047767.01.T02 AT2G02390 59.817 219 80 2 15 226 6 223 3.70e-91 268
MsG0880047767.01.T02 AT2G02390 62.703 185 68 1 15 199 6 189 3.68e-80 238
MsG0880047767.01.T02 AT2G02390 59.524 168 67 1 59 226 21 187 4.77e-70 213
MsG0880047767.01.T02 AT2G30870 33.951 162 92 4 27 179 11 166 1.78e-16 75.5
MsG0880047767.01.T02 AT2G30860 32.051 156 95 4 31 179 15 166 2.21e-13 67.4
MsG0880047767.01.T02 AT2G29460 27.189 217 135 7 13 220 3 205 6.41e-13 66.2
MsG0880047767.01.T02 AT1G78320 34.783 115 70 3 15 127 2 113 7.34e-13 65.9
MsG0880047767.01.T02 AT2G30860 36.752 117 70 3 31 143 15 131 7.72e-13 64.7
MsG0880047767.01.T02 AT3G09270 28.372 215 134 8 14 220 3 205 1.76e-12 64.7
MsG0880047767.01.T02 AT2G29490 28.111 217 133 7 13 220 3 205 3.37e-12 63.9
MsG0880047767.01.T02 AT1G78340 28.235 170 103 5 17 182 4 158 3.65e-12 63.9
MsG0880047767.01.T02 AT5G41210 27.869 183 110 5 17 185 3 177 8.92e-11 60.5
MsG0880047767.01.T02 AT2G29480 28.111 217 133 7 13 220 3 205 8.99e-11 60.1
MsG0880047767.01.T01 AT2G02380 61.751 217 82 1 10 226 4 219 3.94e-97 283
MsG0880047767.01.T01 AT2G02390 61.792 212 80 1 15 226 6 216 4.08e-94 275
MsG0880047767.01.T01 AT2G02390 59.817 219 80 2 15 226 6 223 3.70e-91 268
MsG0880047767.01.T01 AT2G02390 62.703 185 68 1 15 199 6 189 3.68e-80 238
MsG0880047767.01.T01 AT2G02390 59.524 168 67 1 59 226 21 187 4.77e-70 213
MsG0880047767.01.T01 AT2G30870 33.951 162 92 4 27 179 11 166 1.78e-16 75.5
MsG0880047767.01.T01 AT2G30860 32.051 156 95 4 31 179 15 166 2.21e-13 67.4
MsG0880047767.01.T01 AT2G29460 27.189 217 135 7 13 220 3 205 6.41e-13 66.2
MsG0880047767.01.T01 AT1G78320 34.783 115 70 3 15 127 2 113 7.34e-13 65.9
MsG0880047767.01.T01 AT2G30860 36.752 117 70 3 31 143 15 131 7.72e-13 64.7
MsG0880047767.01.T01 AT3G09270 28.372 215 134 8 14 220 3 205 1.76e-12 64.7
MsG0880047767.01.T01 AT2G29490 28.111 217 133 7 13 220 3 205 3.37e-12 63.9
MsG0880047767.01.T01 AT1G78340 28.235 170 103 5 17 182 4 158 3.65e-12 63.9
MsG0880047767.01.T01 AT5G41210 27.869 183 110 5 17 185 3 177 8.92e-11 60.5
MsG0880047767.01.T01 AT2G29480 28.111 217 133 7 13 220 3 205 8.99e-11 60.1

Find 49 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGGGATGGGGTCATTTAC+TGG 0.237427 8:+90568051 MsG0880047767.01.T01:three_prime_UTR
GTTATTAGGCGGTGATGGTT+GGG 0.290466 8:+90568023 MsG0880047767.01.T01:three_prime_UTR
TGGTTGGGGCCTTGAGGGGA+TGG 0.318183 8:+90568038 MsG0880047767.01.T01:three_prime_UTR
GTTGGGGCCTTGAGGGGATG+GGG 0.322678 8:+90568040 MsG0880047767.01.T01:three_prime_UTR
GGAAATGCTAACAAGTGTTT+AGG 0.332770 8:+90568273 MsG0880047767.01.T01:three_prime_UTR
CGGCTGAGAGCAAGGTTATT+AGG 0.333654 8:+90568009 MsG0880047767.01.T01:three_prime_UTR
GGTTGGGGCCTTGAGGGGAT+GGG 0.339886 8:+90568039 MsG0880047767.01.T01:three_prime_UTR
GGTGATGGTTGGGGCCTTGA+GGG 0.354664 8:+90568033 MsG0880047767.01.T01:three_prime_UTR
CGGTGATGGTTGGGGCCTTG+AGG 0.358993 8:+90568032 MsG0880047767.01.T01:three_prime_UTR
TCAAGTTTCACTCTTTGTTT+CGG 0.368914 8:+90568154 MsG0880047767.01.T01:three_prime_UTR
TAGTTTCCACATCGTATTCT+CGG 0.383744 8:+90567288 MsG0880047767.01.T01:intron
GGTTATTAGGCGGTGATGGT+TGG 0.389205 8:+90568022 MsG0880047767.01.T01:three_prime_UTR
CAGAAGTGCAACCTCATGTT+AGG 0.397352 8:+90567132 MsG0880047767.01.T01:intron
CATATTAGTGGGTGTGTTCA+AGG 0.407084 8:+90568214 MsG0880047767.01.T01:three_prime_UTR
TGGGGTCATTTACTGGGCAG+TGG 0.430993 8:+90568058 MsG0880047767.01.T01:three_prime_UTR
AGATACTTTATGTAGCAATA+AGG 0.436165 8:+90567217 MsG0880047767.01.T01:three_prime_UTR
GTCGTTTGAGAGAGATATGT+GGG 0.441071 8:+90568128 MsG0880047767.01.T01:three_prime_UTR
TTATTAGGCGGTGATGGTTG+GGG 0.458713 8:+90568024 MsG0880047767.01.T01:three_prime_UTR
AATTAAAATAAGAGTAATGT+TGG 0.461443 8:-90568247 None:intergenic
GTGATGGTTGGGGCCTTGAG+GGG 0.479781 8:+90568034 MsG0880047767.01.T01:three_prime_UTR
AGGGGATGGGGTCATTTACT+GGG 0.488627 8:+90568052 MsG0880047767.01.T01:three_prime_UTR
GGACCTACTGATTTAGCAGC+TGG 0.488945 8:+90567172 MsG0880047767.01.T01:three_prime_UTR
CGGCGCAGCGGCTGAGAGCA+AGG 0.489596 8:+90568001 MsG0880047767.01.T01:intron
CTCTTTGTTTCGGTCGCATG+TGG 0.495106 8:+90568164 MsG0880047767.01.T01:three_prime_UTR
AACGGCGGCCGTTGCAGCAA+AGG 0.496055 8:+90568085 MsG0880047767.01.T01:three_prime_UTR
ATTAAAATAAGAGTAATGTT+GGG 0.528434 8:-90568246 None:intergenic
GGGGTCATTTACTGGGCAGT+GGG 0.530887 8:+90568059 MsG0880047767.01.T01:three_prime_UTR
AGAGTGTCGTGTCATATTAG+TGG 0.531064 8:+90568202 MsG0880047767.01.T01:three_prime_UTR
GCAAGGTTATTAGGCGGTGA+TGG 0.533444 8:+90568018 MsG0880047767.01.T01:three_prime_UTR
CGATGTGGAAACTAAACACT+AGG 0.545707 8:-90567279 None:intergenic
CTCAAACGACCAACCACCAT+CGG 0.555136 8:-90568115 None:intergenic
GAGTGTCGTGTCATATTAGT+GGG 0.555394 8:+90568203 MsG0880047767.01.T01:three_prime_UTR
TAGGTTGGAGAAATTGCAGC+AGG 0.559202 8:+90567151 MsG0880047767.01.T01:three_prime_UTR
CAACCAGCTGCTAAATCAGT+AGG 0.560800 8:-90567175 None:intergenic
TACGTGCAATAGATTACACT+TGG 0.576214 8:-90567243 None:intergenic
ATATTAGTGGGTGTGTTCAA+GGG 0.579480 8:+90568215 MsG0880047767.01.T01:three_prime_UTR
AGTGCAACCTCATGTTAGGT+TGG 0.581824 8:+90567136 MsG0880047767.01.T01:three_prime_UTR
GTACTCAACCTTTGCTGCAA+CGG 0.583821 8:-90568093 None:intergenic
CAGCAAAGGTTGAGTACCGA+TGG 0.587952 8:+90568099 MsG0880047767.01.T01:three_prime_UTR
GGTCGTTTGAGAGAGATATG+TGG 0.596424 8:+90568127 MsG0880047767.01.T01:three_prime_UTR
TTACTGGGCAGTGGGACGAA+CGG 0.599850 8:+90568067 MsG0880047767.01.T01:three_prime_UTR
GGTTGAGTACCGATGGTGGT+TGG 0.626566 8:+90568106 MsG0880047767.01.T01:three_prime_UTR
CAAAGGTTGAGTACCGATGG+TGG 0.630580 8:+90568102 MsG0880047767.01.T01:three_prime_UTR
TAAATGACCCCATCCCCTCA+AGG 0.634170 8:-90568047 None:intergenic
AATTTCTCCAACCTAACATG+AGG 0.644626 8:-90567143 None:intergenic
CTGGGCAGTGGGACGAACGG+CGG 0.664870 8:+90568070 MsG0880047767.01.T01:three_prime_UTR
TCGTTTGAGAGAGATATGTG+GGG 0.690231 8:+90568129 MsG0880047767.01.T01:three_prime_UTR
CTGAGAGCAAGGTTATTAGG+CGG 0.705464 8:+90568012 MsG0880047767.01.T01:three_prime_UTR
ATTTGACCGAGAATACGATG+TGG 0.719821 8:-90567294 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACCATAAATAATTAATAA+TGG - Chr8:90567558-90567577 None:intergenic 10.0%
!! ACATTCAATTATAAAAATAT+TGG - Chr8:90565813-90565832 None:intergenic 10.0%
!! ACCAAAAATAAAATAAAAAT+AGG + Chr8:90565262-90565281 MsG0880047767.01.T01:intron 10.0%
!! AGAATAAAGATAATAAAAAA+TGG + Chr8:90567396-90567415 MsG0880047767.01.T01:intron 10.0%
!! TAAACTATTCAAATAATAAA+TGG - Chr8:90567011-90567030 None:intergenic 10.0%
!!! AAATTTGTTTTTATATCTTT+TGG + Chr8:90567313-90567332 MsG0880047767.01.T01:intron 10.0%
!!! AATTTTATTTTTTATTATCC+GGG + Chr8:90563878-90563897 MsG0880047767.01.T01:intron 10.0%
!!! ACTTGTTTTTTTTTTTTTTT+TGG + Chr8:90568298-90568317 MsG0880047767.01.T01:three_prime_UTR 10.0%
!!! ATTACTCTTATTTTAATTTA+GGG + Chr8:90568252-90568271 MsG0880047767.01.T01:three_prime_UTR 10.0%
!!! TAAAATTTTTTTTGTTTGTT+AGG + Chr8:90565719-90565738 MsG0880047767.01.T01:intron 10.0%
!!! TCCTATTTTTATTTTATTTT+TGG - Chr8:90565266-90565285 None:intergenic 10.0%
!! AAATTATCCTTATTAACTAT+TGG - Chr8:90563591-90563610 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + Chr8:90563590-90563609 MsG0880047767.01.T01:intron 15.0%
!! AATTAAAATAAGAGTAATGT+TGG - Chr8:90568250-90568269 None:intergenic 15.0%
!! ATTAAAATAAGAGTAATGTT+GGG - Chr8:90568249-90568268 None:intergenic 15.0%
!! ATTTCACTATAGAAAATAAA+AGG - Chr8:90566756-90566775 None:intergenic 15.0%
!! CTACCATTATTAATTATTTA+TGG + Chr8:90567552-90567571 MsG0880047767.01.T01:intron 15.0%
!!! ACAAGTTTTTGAAAATTAAT+AGG + Chr8:90566072-90566091 MsG0880047767.01.T01:intron 15.0%
!!! ATTTTATTTTTTATTATCCG+GGG + Chr8:90563879-90563898 MsG0880047767.01.T01:intron 15.0%
!!! CAAGTTTTTGAAAATTAATA+GGG + Chr8:90566073-90566092 MsG0880047767.01.T01:intron 15.0%
!!! CATTACTCTTATTTTAATTT+AGG + Chr8:90568251-90568270 MsG0880047767.01.T01:three_prime_UTR 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG - Chr8:90563464-90563483 None:intergenic 15.0%
!!! TGTGTTTTATTTCTTTAAAT+TGG + Chr8:90567591-90567610 MsG0880047767.01.T01:intron 15.0%
!!! TTTTTTGACTTTTTATAGAT+TGG + Chr8:90563823-90563842 MsG0880047767.01.T01:intron 15.0%
!! AAAATTATCATATGCTTTAG+AGG - Chr8:90566980-90566999 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + Chr8:90563581-90563600 MsG0880047767.01.T01:intron 20.0%
!! AAAGATAATAAAAAATGGAG+AGG + Chr8:90567401-90567420 MsG0880047767.01.T01:intron 20.0%
!! AAGATAATAAAAAATGGAGA+GGG + Chr8:90567402-90567421 MsG0880047767.01.T01:intron 20.0%
!! AATAAAAATAGGAACATATG+AGG + Chr8:90565273-90565292 MsG0880047767.01.T01:intron 20.0%
!! AATAAAAATATAAAGGAGTG+AGG - Chr8:90565564-90565583 None:intergenic 20.0%
!! AATAAATGGATAATGTCATT+TGG + Chr8:90567495-90567514 MsG0880047767.01.T01:intron 20.0%
!! AATATAAGAGAATCCATTTA+CGG - Chr8:90564516-90564535 None:intergenic 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - Chr8:90563624-90563643 None:intergenic 20.0%
!! ACTGAATATAATCTATTATC+TGG - Chr8:90567830-90567849 None:intergenic 20.0%
!! ACTTAATTACTTATAGTATG+TGG - Chr8:90564372-90564391 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - Chr8:90563504-90563523 None:intergenic 20.0%
!! AGTATAGTTAGTAATATGTT+GGG + Chr8:90565603-90565622 MsG0880047767.01.T01:intron 20.0%
!! AGTGAGTCTTAATTTATTTA+AGG - Chr8:90563922-90563941 None:intergenic 20.0%
!! ATAAATTATGACATAGGTTA+GGG - Chr8:90564056-90564075 None:intergenic 20.0%
!! CTTCATTTGCTTAAAATAAA+TGG + Chr8:90567481-90567500 MsG0880047767.01.T01:intron 20.0%
!! GATACTATAAATTATGACAT+AGG - Chr8:90564062-90564081 None:intergenic 20.0%
!! GTGAGTCTTAATTTATTTAA+GGG - Chr8:90563921-90563940 None:intergenic 20.0%
!! TAATTGGAAGAATTTATTGA+TGG + Chr8:90563343-90563362 MsG0880047767.01.T01:intron 20.0%
!! TACATTTCTTGATAAACATT+TGG + Chr8:90565202-90565221 MsG0880047767.01.T01:intron 20.0%
!! TAGTATAGTTAGTAATATGT+TGG + Chr8:90565602-90565621 MsG0880047767.01.T01:intron 20.0%
!! TATAAATTATGACATAGGTT+AGG - Chr8:90564057-90564076 None:intergenic 20.0%
!! TCTAATGGAAAAAAAAACTT+TGG + Chr8:90567365-90567384 MsG0880047767.01.T01:intron 20.0%
!! TGTTGAATTGATGTTAAAAA+GGG - Chr8:90563206-90563225 None:intergenic 20.0%
!!! AAATACAAAAAAGTATGTAG+TGG + Chr8:90567526-90567545 MsG0880047767.01.T01:intron 20.0%
!!! AATACAAAAAAGTATGTAGT+GGG + Chr8:90567527-90567546 MsG0880047767.01.T01:intron 20.0%
!!! ATTTTAACGACACTTAAAAA+AGG + Chr8:90563706-90563725 MsG0880047767.01.T01:intron 20.0%
!!! TAAAATTTTGCAAAAGTACA+TGG + Chr8:90566574-90566593 MsG0880047767.01.T01:intron 20.0%
!!! TAAATTCTTTCTAAAGCTAT+TGG - Chr8:90564851-90564870 None:intergenic 20.0%
!!! TAGATGTTTTTAACATCTAA+TGG + Chr8:90567350-90567369 MsG0880047767.01.T01:intron 20.0%
!!! TCTTTCTTGGAATATATTTT+TGG + Chr8:90566126-90566145 MsG0880047767.01.T01:intron 20.0%
!!! TGTTTTGCTGTTATTTAAAA+GGG + Chr8:90564646-90564665 MsG0880047767.01.T01:intron 20.0%
!!! TTAGTAATAACTTCCTTTTT+TGG - Chr8:90563793-90563812 None:intergenic 20.0%
!!! TTTGTTTTTATATCTTTTGG+TGG + Chr8:90567316-90567335 MsG0880047767.01.T01:intron 20.0%
!!! TTTTAACGACACTTAAAAAA+GGG + Chr8:90563707-90563726 MsG0880047767.01.T01:intron 20.0%
!!! TTTTATTTTTTATTATCCGG+GGG + Chr8:90563880-90563899 MsG0880047767.01.T01:intron 20.0%
!!! TTTTTTTTTTGGTACAGATT+AGG + Chr8:90568309-90568328 MsG0880047767.01.T01:three_prime_UTR 20.0%
! AAATTCAATCTTTCGTAAGT+TGG + Chr8:90565302-90565321 MsG0880047767.01.T01:intron 25.0%
! AACTTACGAAAGATTGAATT+TGG - Chr8:90565303-90565322 None:intergenic 25.0%
! AAGTAGAAGTTTCATCTAAA+TGG + Chr8:90565031-90565050 MsG0880047767.01.T01:intron 25.0%
! AAGTGCATGCAAAAAATAAT+TGG + Chr8:90563327-90563346 MsG0880047767.01.T01:intron 25.0%
! AATAGATTATATTCAGTCAC+AGG + Chr8:90567833-90567852 MsG0880047767.01.T01:intron 25.0%
! AATCAAAGAAGCTAAAGTAA+TGG - Chr8:90566348-90566367 None:intergenic 25.0%
! AATGAAACACATACGAAATT+TGG + Chr8:90565103-90565122 MsG0880047767.01.T01:intron 25.0%
! ACACGTTTATTATCATTTGT+AGG + Chr8:90566183-90566202 MsG0880047767.01.T01:intron 25.0%
! AGACATTGTAGATTTAGAAA+AGG - Chr8:90564223-90564242 None:intergenic 25.0%
! AGATACTTTATGTAGCAATA+AGG + Chr8:90567217-90567236 MsG0880047767.01.T01:three_prime_UTR 25.0%
! ATAAAATTGTCCAAAATTCG+AGG - Chr8:90567693-90567712 None:intergenic 25.0%
! ATAATCTATTATCTGGACAA+TGG - Chr8:90567823-90567842 None:intergenic 25.0%
! ATATAAGAGAATCCATTTAC+GGG - Chr8:90564515-90564534 None:intergenic 25.0%
! CAAATGATAATAAACGTGTT+AGG - Chr8:90566182-90566201 None:intergenic 25.0%
! CACGAAACAATCAATAAATT+GGG - Chr8:90567743-90567762 None:intergenic 25.0%
! GAATGAATGAATGAATGTAA+AGG - Chr8:90563949-90563968 None:intergenic 25.0%
! GATCTTTACTCATTAATTAG+AGG - Chr8:90567459-90567478 None:intergenic 25.0%
! GTGTTGAATTGATGTTAAAA+AGG - Chr8:90563207-90563226 None:intergenic 25.0%
! TAAATTATGACATAGGTTAG+GGG - Chr8:90564055-90564074 None:intergenic 25.0%
! TAATCTATTATCTGGACAAT+GGG - Chr8:90567822-90567841 None:intergenic 25.0%
! TACTAAAAGCTTAAGCAAAT+AGG - Chr8:90566441-90566460 None:intergenic 25.0%
! TAGTTTCAAAAGCAATACTT+TGG - Chr8:90563567-90563586 None:intergenic 25.0%
! TCATGTAATCTTGATAGAAT+AGG - Chr8:90566860-90566879 None:intergenic 25.0%
! TTACATTCATTCATTCATTC+AGG + Chr8:90563949-90563968 MsG0880047767.01.T01:intron 25.0%
! TTTCTCTCTCTCAAAATTAT+AGG + Chr8:90564622-90564641 MsG0880047767.01.T01:intron 25.0%
! TTTGAAGAACACAAAATGAA+AGG - Chr8:90566489-90566508 None:intergenic 25.0%
!! AAAATTTTATCTGTGAAGCA+CGG - Chr8:90565708-90565727 None:intergenic 25.0%
!! ATGATTTTGAACCTAACAAA+TGG + Chr8:90565392-90565411 MsG0880047767.01.T01:intron 25.0%
!! ATTAAAACGAGAGTATAACA+AGG + Chr8:90563366-90563385 MsG0880047767.01.T01:intron 25.0%
!! TGTTATTTAAAAGGGAGAAA+AGG + Chr8:90564654-90564673 MsG0880047767.01.T01:intron 25.0%
!! TTCTTTCAATAGCTTTTCAA+GGG - Chr8:90565843-90565862 None:intergenic 25.0%
!!! CTGTTTTGCTGTTATTTAAA+AGG + Chr8:90564645-90564664 MsG0880047767.01.T01:intron 25.0%
AAAAACTTGTGATCTGACTT+TGG - Chr8:90566062-90566081 None:intergenic 30.0%
AAACATTTGGACTTAATCTG+TGG + Chr8:90565215-90565234 MsG0880047767.01.T01:intron 30.0%
AAACCTATCTCTAGTAAGTA+GGG - Chr8:90565746-90565765 None:intergenic 30.0%
AAAGAGGATGCATTCATTTA+AGG + Chr8:90566679-90566698 MsG0880047767.01.T01:intron 30.0%
AAAGAGTCAAAAATAACAGC+AGG - Chr8:90564175-90564194 None:intergenic 30.0%
AAAGATTCACTCCATTTGTT+AGG - Chr8:90565406-90565425 None:intergenic 30.0%
AAAGCAGTTAATCTGTTGAA+GGG + Chr8:90563988-90564007 MsG0880047767.01.T01:CDS 30.0%
AAGAGGATGCATTCATTTAA+GGG + Chr8:90566680-90566699 MsG0880047767.01.T01:intron 30.0%
AAGAGTCAAAAATAACAGCA+GGG - Chr8:90564174-90564193 None:intergenic 30.0%
AAGATGATAGTCCAATAATC+AGG - Chr8:90567654-90567673 None:intergenic 30.0%
ACATTGCTAGCCAAAAAATT+TGG - Chr8:90565953-90565972 None:intergenic 30.0%
ACGAAATTTGGCTATTACAA+TGG + Chr8:90565115-90565134 MsG0880047767.01.T01:intron 30.0%
ACTCACTAAAACTAGATTTC+CGG + Chr8:90567981-90568000 MsG0880047767.01.T01:intron 30.0%
AGTAAGTCATGTGATGAATT+TGG - Chr8:90566806-90566825 None:intergenic 30.0%
ATAGAATAGGAAACTCATTC+TGG - Chr8:90566847-90566866 None:intergenic 30.0%
ATGGATAAAATCAGTCATTG+TGG + Chr8:90566711-90566730 MsG0880047767.01.T01:intron 30.0%
ATTCACATGGTAGTATTCTA+TGG + Chr8:90566256-90566275 MsG0880047767.01.T01:intron 30.0%
CAACGTTTCAAAGATCAAAT+TGG + Chr8:90566644-90566663 MsG0880047767.01.T01:intron 30.0%
CATTGCTAGCCAAAAAATTT+GGG - Chr8:90565952-90565971 None:intergenic 30.0%
CCACGAAACAATCAATAAAT+TGG - Chr8:90567744-90567763 None:intergenic 30.0%
CGTTTATTATCATTTGTAGG+CGG + Chr8:90566186-90566205 MsG0880047767.01.T01:intron 30.0%
GACATAATTGACACTAATGA+TGG - Chr8:90564900-90564919 None:intergenic 30.0%
GTAAGTCATGTGATGAATTT+GGG - Chr8:90566805-90566824 None:intergenic 30.0%
GTCCAGAATGTAATCAAAAA+AGG + Chr8:90564794-90564813 MsG0880047767.01.T01:CDS 30.0%
TAAGAGATTCAACATTCACA+TGG + Chr8:90566243-90566262 MsG0880047767.01.T01:CDS 30.0%
TATTTAAGGGAAATGCTAAC+CGG - Chr8:90563908-90563927 None:intergenic 30.0%
TCATTAATTAGAGGTAGAGA+TGG - Chr8:90567450-90567469 None:intergenic 30.0%
TGTTAGGTTCAAAATCATTG+AGG - Chr8:90565390-90565409 None:intergenic 30.0%
! AAATTTTATCTGTGAAGCAC+GGG - Chr8:90565707-90565726 None:intergenic 30.0%
! CATTCTGGTTGAACAATTAA+GGG - Chr8:90566832-90566851 None:intergenic 30.0%
! CCAATTTATTGATTGTTTCG+TGG + Chr8:90567741-90567760 MsG0880047767.01.T01:intron 30.0%
! CTAGCTGATTCAATAATTTG+GGG + Chr8:90566943-90566962 MsG0880047767.01.T01:intron 30.0%
! CTCTAAAAAATCCACTATCT+CGG + Chr8:90563396-90563415 MsG0880047767.01.T01:intron 30.0%
! GCTAGCTGATTCAATAATTT+GGG + Chr8:90566942-90566961 MsG0880047767.01.T01:intron 30.0%
! GTTCTTTCAATAGCTTTTCA+AGG - Chr8:90565844-90565863 None:intergenic 30.0%
! TACTTTAGCTTCTTTGATTG+AGG + Chr8:90566349-90566368 MsG0880047767.01.T01:intron 30.0%
! TCAAGTTTCACTCTTTGTTT+CGG + Chr8:90568154-90568173 MsG0880047767.01.T01:three_prime_UTR 30.0%
! TCATTCTGGTTGAACAATTA+AGG - Chr8:90566833-90566852 None:intergenic 30.0%
! TGAAACTTCTACTTCTCTTT+TGG - Chr8:90565025-90565044 None:intergenic 30.0%
! TTGGTTTCTCTTCTTATTTC+TGG - Chr8:90565247-90565266 None:intergenic 30.0%
! TTTTTGCTTTAACCACTTGT+TGG + Chr8:90566599-90566618 MsG0880047767.01.T01:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG + Chr8:90563673-90563692 MsG0880047767.01.T01:intron 30.0%
!! ATATTTTTGTGCGGGAATAA+GGG + Chr8:90566286-90566305 MsG0880047767.01.T01:intron 30.0%
!! CTTATATTGATTTCATCCAC+AGG + Chr8:90564528-90564547 MsG0880047767.01.T01:intron 30.0%
!! TAACAAATGTTATTTCCACC+AGG - Chr8:90565455-90565474 None:intergenic 30.0%
!! TATATTTTTGTGCGGGAATA+AGG + Chr8:90566285-90566304 MsG0880047767.01.T01:intron 30.0%
!! TGGAGTTAGTTCTGTTAAAA+GGG + Chr8:90565918-90565937 MsG0880047767.01.T01:intron 30.0%
!! TTGGAGTTAGTTCTGTTAAA+AGG + Chr8:90565917-90565936 MsG0880047767.01.T01:intron 30.0%
!!! AGCCTTTTTTGATTACATTC+TGG - Chr8:90564799-90564818 None:intergenic 30.0%
!!! CGATGTTTGATTTTAATTGC+TGG + Chr8:90567103-90567122 MsG0880047767.01.T01:intron 30.0%
!!! GTTTTTGATAGTGAGAACAA+TGG - Chr8:90567946-90567965 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - Chr8:90563672-90563691 None:intergenic 30.0%
AAAAAATCCACTATCTCGGT+TGG + Chr8:90563400-90563419 MsG0880047767.01.T01:intron 35.0%
AACAGCTTGCAAAATTAGCT+CGG - Chr8:90567917-90567936 None:intergenic 35.0%
AAGCTATTGAAAGAACACAC+TGG + Chr8:90565848-90565867 MsG0880047767.01.T01:CDS 35.0%
AAGCTTAAGCAAATAGGCAA+TGG - Chr8:90566435-90566454 None:intergenic 35.0%
AAGTACATTGAGGGAAAAGT+TGG + Chr8:90564749-90564768 MsG0880047767.01.T01:CDS 35.0%
AATGGAGTGAATCTTTCGAT+TGG + Chr8:90565410-90565429 MsG0880047767.01.T01:intron 35.0%
AATTTCTCCAACCTAACATG+AGG - Chr8:90567146-90567165 None:intergenic 35.0%
ACTGAAACTCGTATCTAGTA+AGG - Chr8:90565769-90565788 None:intergenic 35.0%
AGAGGATGCATTCATTTAAG+GGG + Chr8:90566681-90566700 MsG0880047767.01.T01:intron 35.0%
AGATCTTAGCTCCTGATTAT+TGG + Chr8:90567640-90567659 MsG0880047767.01.T01:intron 35.0%
AGCATGACCCTTTCTTTAAT+TGG - Chr8:90563737-90563756 None:intergenic 35.0%
AGCTATTGAAAGAACACACT+GGG + Chr8:90565849-90565868 MsG0880047767.01.T01:CDS 35.0%
AGGGGTTGTAATGAAACATA+TGG + Chr8:90566305-90566324 MsG0880047767.01.T01:intron 35.0%
AGTTAGTAATATGTTGGGAG+TGG + Chr8:90565608-90565627 MsG0880047767.01.T01:intron 35.0%
ATATTCAGTCACAGGTGTTT+GGG + Chr8:90567841-90567860 MsG0880047767.01.T01:intron 35.0%
ATCTAAATGGCATGGAAATG+AGG + Chr8:90565044-90565063 MsG0880047767.01.T01:intron 35.0%
CAAAATCATTGAGGTCCTAA+AGG - Chr8:90565381-90565400 None:intergenic 35.0%
CAAAGCAGTTAATCTGTTGA+AGG + Chr8:90563987-90564006 MsG0880047767.01.T01:CDS 35.0%
CACTAGATTTGCATCTTTCT+TGG + Chr8:90566113-90566132 MsG0880047767.01.T01:intron 35.0%
CATGGTATGTTGCTAATGAT+TGG + Chr8:90565898-90565917 MsG0880047767.01.T01:intron 35.0%
CCCTACTGATATTCACAAAA+GGG + Chr8:90564320-90564339 MsG0880047767.01.T01:CDS 35.0%
CTGGTTAAGGATACCAAAAA+AGG + Chr8:90563777-90563796 MsG0880047767.01.T01:intron 35.0%
CTGTAAATCCACAAAATGGT+TGG - Chr8:90564686-90564705 None:intergenic 35.0%
CTGTTAAAGTGATGACAAGT+TGG + Chr8:90564415-90564434 MsG0880047767.01.T01:intron 35.0%
GAAACCTATCTCTAGTAAGT+AGG - Chr8:90565747-90565766 None:intergenic 35.0%
GAAGTTTCATCTAAATGGCA+TGG + Chr8:90565036-90565055 MsG0880047767.01.T01:intron 35.0%
GGAAATGCTAACAAGTGTTT+AGG + Chr8:90568273-90568292 MsG0880047767.01.T01:three_prime_UTR 35.0%
GGATTTACAGTGCATATGAT+AGG + Chr8:90564696-90564715 MsG0880047767.01.T01:intron 35.0%
GTAATCAAAAAAGGCTTCAC+AGG + Chr8:90564803-90564822 MsG0880047767.01.T01:CDS 35.0%
GTTAGTAATATGTTGGGAGT+GGG + Chr8:90565609-90565628 MsG0880047767.01.T01:intron 35.0%
TACGTGCAATAGATTACACT+TGG - Chr8:90567246-90567265 None:intergenic 35.0%
TAGTTTCCACATCGTATTCT+CGG + Chr8:90567288-90567307 MsG0880047767.01.T01:intron 35.0%
TATATTCAGTCACAGGTGTT+TGG + Chr8:90567840-90567859 MsG0880047767.01.T01:intron 35.0%
TCATTTAAGGGGGTTCAATA+TGG + Chr8:90566692-90566711 MsG0880047767.01.T01:intron 35.0%
TCCAGAACATGAATTTGAAC+AGG - Chr8:90564472-90564491 None:intergenic 35.0%
TCCCTACTGATATTCACAAA+AGG + Chr8:90564319-90564338 MsG0880047767.01.T01:CDS 35.0%
TCCTCAATTTAACCCGTAAA+TGG + Chr8:90564500-90564519 MsG0880047767.01.T01:intron 35.0%
TCCTGTTCAAATTCATGTTC+TGG + Chr8:90564468-90564487 MsG0880047767.01.T01:intron 35.0%
TGACTCTTTCGCTATTATCA+TGG + Chr8:90564186-90564205 MsG0880047767.01.T01:CDS 35.0%
TGCACTGTAAATCCACAAAA+TGG - Chr8:90564690-90564709 None:intergenic 35.0%
TGGACAATGGGAAATTATGA+AGG - Chr8:90567810-90567829 None:intergenic 35.0%
TTAGTAATATGTTGGGAGTG+GGG + Chr8:90565610-90565629 MsG0880047767.01.T01:intron 35.0%
TTGAGAGAGAGAAAAAGAGA+TGG - Chr8:90564616-90564635 None:intergenic 35.0%
TTGGTCATTCAATCAGAAAG+AGG + Chr8:90566663-90566682 MsG0880047767.01.T01:intron 35.0%
! ACATATGGCTTTTATTGCTG+TGG + Chr8:90566320-90566339 MsG0880047767.01.T01:intron 35.0%
! AGGAGATTTAGGTTATGAAG+GGG - Chr8:90564583-90564602 None:intergenic 35.0%
! ATATTAGTGGGTGTGTTCAA+GGG + Chr8:90568215-90568234 MsG0880047767.01.T01:three_prime_UTR 35.0%
! ATTTGTTAGCTTGAGCATTC+AGG + Chr8:90565467-90565486 MsG0880047767.01.T01:intron 35.0%
! CAAAAGGGCTATCAATTTTC+AGG + Chr8:90564335-90564354 MsG0880047767.01.T01:CDS 35.0%
! CAGGAGATTTAGGTTATGAA+GGG - Chr8:90564584-90564603 None:intergenic 35.0%
! CCCTTTTGTGAATATCAGTA+GGG - Chr8:90564323-90564342 None:intergenic 35.0%
! GGCTAGCTGATTCAATAATT+TGG + Chr8:90566941-90566960 MsG0880047767.01.T01:intron 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - Chr8:90563542-90563561 None:intergenic 35.0%
! GTTTACTTTCTCGATCCTTT+TGG + Chr8:90564998-90565017 MsG0880047767.01.T01:intron 35.0%
! TACTTCTCTTTTGGACCAAA+AGG - Chr8:90565016-90565035 None:intergenic 35.0%
! TCCATTTACGGGTTAAATTG+AGG - Chr8:90564504-90564523 None:intergenic 35.0%
! TGAATCTTTCGATTGGTCAA+AGG + Chr8:90565417-90565436 MsG0880047767.01.T01:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - Chr8:90563538-90563557 None:intergenic 35.0%
! TGTTTGCAGAAGTACATTGA+GGG + Chr8:90564740-90564759 MsG0880047767.01.T01:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - Chr8:90563438-90563457 None:intergenic 35.0%
!! AGGGAGTACCAATTAAAGAA+AGG + Chr8:90563726-90563745 MsG0880047767.01.T01:intron 35.0%
!! GGGAGTACCAATTAAAGAAA+GGG + Chr8:90563727-90563746 MsG0880047767.01.T01:intron 35.0%
!! GGTCTCGATATATTTTTGTG+CGG + Chr8:90566277-90566296 MsG0880047767.01.T01:intron 35.0%
!! GTCTCGATATATTTTTGTGC+GGG + Chr8:90566278-90566297 MsG0880047767.01.T01:intron 35.0%
!! TATTTTTGTGCGGGAATAAG+GGG + Chr8:90566287-90566306 MsG0880047767.01.T01:intron 35.0%
!!! GGAAATCTAGTTTTAGTGAG+TGG - Chr8:90567982-90568001 None:intergenic 35.0%
AAAAAAGAGAGGATCGAACC+AGG - Chr8:90564027-90564046 None:intergenic 40.0%
AAAGAGATGGCTTACATACC+AGG - Chr8:90564603-90564622 None:intergenic 40.0%
AACACAAGGCTAAAACTGAC+AGG - Chr8:90566394-90566413 None:intergenic 40.0%
AACTCCTCCAATACGAATAC+AGG - Chr8:90563133-90563152 None:intergenic 40.0%
ACACAAGGCTAAAACTGACA+GGG - Chr8:90566393-90566412 None:intergenic 40.0%
AGAACAGGAACAAAACCAAC+AGG - Chr8:90564142-90564161 None:intergenic 40.0%
AGAGGATGTCTATCTCCTTT+AGG + Chr8:90565363-90565382 MsG0880047767.01.T01:intron 40.0%
AGCCAAAAAATTTGGGCTAC+TGG - Chr8:90565945-90565964 None:intergenic 40.0%
AGCTGATCCTGTATTCGTAT+TGG + Chr8:90563123-90563142 MsG0880047767.01.T01:CDS 40.0%
ATATCAACCAGTTGTCTTGC+TGG + Chr8:90565339-90565358 MsG0880047767.01.T01:intron 40.0%
ATTATGAGATCCCAGCATTC+CGG + Chr8:90566885-90566904 MsG0880047767.01.T01:CDS 40.0%
ATTTGACCGAGAATACGATG+TGG - Chr8:90567297-90567316 None:intergenic 40.0%
CCCTGATGAAAAACTTCCAT+GGG + Chr8:90564772-90564791 MsG0880047767.01.T01:CDS 40.0%
CCTTCATAACCTAAATCTCC+TGG + Chr8:90564582-90564601 MsG0880047767.01.T01:CDS 40.0%
CGATGTGGAAACTAAACACT+AGG - Chr8:90567282-90567301 None:intergenic 40.0%
GAACAGGAACAAAACCAACA+GGG - Chr8:90564141-90564160 None:intergenic 40.0%
GAGGATGCATTCATTTAAGG+GGG + Chr8:90566682-90566701 MsG0880047767.01.T01:intron 40.0%
GCTTACATACCAGGAGATTT+AGG - Chr8:90564594-90564613 None:intergenic 40.0%
GTCGTTTGAGAGAGATATGT+GGG + Chr8:90568128-90568147 MsG0880047767.01.T01:three_prime_UTR 40.0%
TAAATGGCATGGAAATGAGG+TGG + Chr8:90565047-90565066 MsG0880047767.01.T01:intron 40.0%
TAGGGGTAAGGAAAAAAGAG+AGG - Chr8:90564038-90564057 None:intergenic 40.0%
TATGACATAGGTTAGGGGTA+AGG - Chr8:90564050-90564069 None:intergenic 40.0%
TATGCATTGCTCGCAGTATT+TGG + Chr8:90564266-90564285 MsG0880047767.01.T01:intron 40.0%
TATTGAAAGAACACACTGGG+AGG + Chr8:90565852-90565871 MsG0880047767.01.T01:CDS 40.0%
TCAATGCGATGAGAGCAATT+GGG + Chr8:90565161-90565180 MsG0880047767.01.T01:intron 40.0%
TCGTTTGAGAGAGATATGTG+GGG + Chr8:90568129-90568148 MsG0880047767.01.T01:three_prime_UTR 40.0%
TGAATATCAGTAGGGAGCAA+AGG - Chr8:90564315-90564334 None:intergenic 40.0%
TGATCCTGTATTCGTATTGG+AGG + Chr8:90563126-90563145 MsG0880047767.01.T01:CDS 40.0%
TTAGATGCAGCATGTAACTG+AGG - Chr8:90566226-90566245 None:intergenic 40.0%
TTGATTACATTCTGGACCCA+TGG - Chr8:90564791-90564810 None:intergenic 40.0%
! ACCCATGGAAGTTTTTCATC+AGG - Chr8:90564776-90564795 None:intergenic 40.0%
! AGAGCTACTACCTCGAATTT+TGG + Chr8:90567680-90567699 MsG0880047767.01.T01:intron 40.0%
! AGGAGTGTGAACAAAACACA+AGG - Chr8:90566408-90566427 None:intergenic 40.0%
! CAAAGGTATACTAGTAGACC+TGG + Chr8:90565434-90565453 MsG0880047767.01.T01:intron 40.0%
! CATATTAGTGGGTGTGTTCA+AGG + Chr8:90568214-90568233 MsG0880047767.01.T01:three_prime_UTR 40.0%
! CCAGGAGATTTAGGTTATGA+AGG - Chr8:90564585-90564604 None:intergenic 40.0%
! CCCATGGAAGTTTTTCATCA+GGG - Chr8:90564775-90564794 None:intergenic 40.0%
! CTGATTCAATAATTTGGGGC+TGG + Chr8:90566947-90566966 MsG0880047767.01.T01:three_prime_UTR 40.0%
! CTGTTTGCAGAAGTACATTG+AGG + Chr8:90564739-90564758 MsG0880047767.01.T01:intron 40.0%
! GAGTGTCGTGTCATATTAGT+GGG + Chr8:90568203-90568222 MsG0880047767.01.T01:three_prime_UTR 40.0%
! GCCCTTTTGTGAATATCAGT+AGG - Chr8:90564324-90564343 None:intergenic 40.0%
! GGAACAAACCAACCATTTTG+TGG + Chr8:90564675-90564694 MsG0880047767.01.T01:intron 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - Chr8:90563539-90563558 None:intergenic 40.0%
! TACGGGTTAAATTGAGGAAC+AGG - Chr8:90564498-90564517 None:intergenic 40.0%
! TACTGGAGACGAAGTTTTCA+TGG + Chr8:90565880-90565899 MsG0880047767.01.T01:CDS 40.0%
!! AGAGTGTCGTGTCATATTAG+TGG + Chr8:90568202-90568221 MsG0880047767.01.T01:three_prime_UTR 40.0%
!! GTGTTTTGTTCACACTCCTT+TGG + Chr8:90566409-90566428 MsG0880047767.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + Chr8:90563677-90563696 MsG0880047767.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - Chr8:90563696-90563677 None:intergenic 40.0%
!!! GTCCAGTAGCCCAAATTTTT+TGG + Chr8:90565940-90565959 MsG0880047767.01.T01:intron 40.0%
AAGGGAGAACAATCTCATCC+TGG + Chr8:90564006-90564025 MsG0880047767.01.T01:CDS 45.0%
AGCAAATAGGCAATGGCCAA+AGG - Chr8:90566428-90566447 None:intergenic 45.0%
AGGTATACTAGTAGACCTGG+TGG + Chr8:90565437-90565456 MsG0880047767.01.T01:intron 45.0%
AGTGCAACCTCATGTTAGGT+TGG + Chr8:90567136-90567155 MsG0880047767.01.T01:three_prime_UTR 45.0%
CAACCAGCTGCTAAATCAGT+AGG - Chr8:90567178-90567197 None:intergenic 45.0%
CAAGAAGTGGAGTGATACAG+AGG - Chr8:90565649-90565668 None:intergenic 45.0%
CTGAGAGCAAGGTTATTAGG+CGG + Chr8:90568012-90568031 MsG0880047767.01.T01:three_prime_UTR 45.0%
CTTCACTAACAGCCAACAAG+TGG - Chr8:90566614-90566633 None:intergenic 45.0%
GAAACAATACTGACAGCCTG+TGG - Chr8:90564547-90564566 None:intergenic 45.0%
GCCCTGATGAAAAACTTCCA+TGG + Chr8:90564771-90564790 MsG0880047767.01.T01:CDS 45.0%
GGTCCCTACTTACTAGAGAT+AGG + Chr8:90565740-90565759 MsG0880047767.01.T01:intron 45.0%
GGTCGTTTGAGAGAGATATG+TGG + Chr8:90568127-90568146 MsG0880047767.01.T01:three_prime_UTR 45.0%
GTACTCAACCTTTGCTGCAA+CGG - Chr8:90568096-90568115 None:intergenic 45.0%
GTCAATGCGATGAGAGCAAT+TGG + Chr8:90565160-90565179 MsG0880047767.01.T01:intron 45.0%
TACGAGTTTCAGTGTGTTGC+TGG + Chr8:90565776-90565795 MsG0880047767.01.T01:intron 45.0%
TCTGTGAAGCACGGGATATA+AGG - Chr8:90565699-90565718 None:intergenic 45.0%
TGAAGCACGGGATATAAGGT+TGG - Chr8:90565695-90565714 None:intergenic 45.0%
TGGAGTGATACAGAGGTCAA+TGG - Chr8:90565642-90565661 None:intergenic 45.0%
TGGTATCCTTAACCAGTGTC+CGG - Chr8:90563773-90563792 None:intergenic 45.0%
TTATGAGATCCCAGCATTCC+GGG + Chr8:90566886-90566905 MsG0880047767.01.T01:CDS 45.0%
TTTGTTCCTGTTCTCGTCGA+TGG + Chr8:90564148-90564167 MsG0880047767.01.T01:CDS 45.0%
! CAGAAGTGCAACCTCATGTT+AGG + Chr8:90567132-90567151 MsG0880047767.01.T01:intron 45.0%
! GTTATTAGGCGGTGATGGTT+GGG + Chr8:90568023-90568042 MsG0880047767.01.T01:three_prime_UTR 45.0%
! TAGGTTGGAGAAATTGCAGC+AGG + Chr8:90567151-90567170 MsG0880047767.01.T01:three_prime_UTR 45.0%
! TTATTAGGCGGTGATGGTTG+GGG + Chr8:90568024-90568043 MsG0880047767.01.T01:three_prime_UTR 45.0%
!! CTTTGAGGTTGAGAGCGATT+CGG - Chr8:90563172-90563191 None:intergenic 45.0%
!! TTTTTATTATCCGGGGGCAC+CGG + Chr8:90563886-90563905 MsG0880047767.01.T01:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + Chr8:90563676-90563695 MsG0880047767.01.T01:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - Chr8:90563695-90563676 None:intergenic 45.0%
!! TCATAAAAATAAAAATATAA+AGG - Chr8:90565571-90565590 None:intergenic 5.0%
!!! TAATTTTATTTTTTATTATC+CGG + Chr8:90563877-90563896 MsG0880047767.01.T01:intron 5.0%
AAACTAGATTTCCGGCGCAG+CGG + Chr8:90567989-90568008 MsG0880047767.01.T01:intron 50.0%
AGGGGATGGGGTCATTTACT+GGG + Chr8:90568052-90568071 MsG0880047767.01.T01:three_prime_UTR 50.0%
AGTGAGTGGTGAATCACTCG+TGG - Chr8:90567968-90567987 None:intergenic 50.0%
CAAAACCAACAGGGTTGAGC+TGG - Chr8:90564132-90564151 None:intergenic 50.0%
CGAATCGCTCTCAACCTCAA+AGG + Chr8:90563170-90563189 MsG0880047767.01.T01:CDS 50.0%
CGGCTGAGAGCAAGGTTATT+AGG + Chr8:90568009-90568028 MsG0880047767.01.T01:three_prime_UTR 50.0%
CTCAAACGACCAACCACCAT+CGG - Chr8:90568118-90568137 None:intergenic 50.0%
GAGAATCAGCCAGATGCAGT+AGG + Chr8:90566920-90566939 MsG0880047767.01.T01:CDS 50.0%
GAGGTGGGGAAATCAAGAAG+TGG - Chr8:90565662-90565681 None:intergenic 50.0%
GCAAGGTTATTAGGCGGTGA+TGG + Chr8:90568018-90568037 MsG0880047767.01.T01:three_prime_UTR 50.0%
GCATTGCTCGCAGTATTTGG+AGG + Chr8:90564269-90564288 MsG0880047767.01.T01:intron 50.0%
GGGAGCAAAGGATGTTGTTG+AGG - Chr8:90564303-90564322 None:intergenic 50.0%
GGTATCCTTAACCAGTGTCC+GGG - Chr8:90563772-90563791 None:intergenic 50.0%
GTACACTCCAACCGAGATAG+TGG - Chr8:90563410-90563429 None:intergenic 50.0%
TAAATGACCCCATCCCCTCA+AGG - Chr8:90568050-90568069 None:intergenic 50.0%
TCGCTCTCAACCTCAAAGGT+AGG + Chr8:90563174-90563193 MsG0880047767.01.T01:intron 50.0%
TTTCTCCAGCTCAACCCTGT+TGG + Chr8:90564124-90564143 MsG0880047767.01.T01:CDS 50.0%
! ACTGCATCTGGCTGATTCTC+TGG - Chr8:90566920-90566939 None:intergenic 50.0%
! ATCAGCTAGCCTACTGCATC+TGG - Chr8:90566932-90566951 None:intergenic 50.0%
! CTCTTTGTTTCGGTCGCATG+TGG + Chr8:90568164-90568183 MsG0880047767.01.T01:three_prime_UTR 50.0%
! GATTCTCTGGCAAAGCATCC+CGG - Chr8:90566907-90566926 None:intergenic 50.0%
! GGTTATTAGGCGGTGATGGT+TGG + Chr8:90568022-90568041 MsG0880047767.01.T01:three_prime_UTR 50.0%
!! CAAAGGTTGAGTACCGATGG+TGG + Chr8:90568102-90568121 MsG0880047767.01.T01:three_prime_UTR 50.0%
!! CAGCAAAGGTTGAGTACCGA+TGG + Chr8:90568099-90568118 MsG0880047767.01.T01:three_prime_UTR 50.0%
!! GGACCTACTGATTTAGCAGC+TGG + Chr8:90567172-90567191 MsG0880047767.01.T01:three_prime_UTR 50.0%
!! GGGATATAAGGTTGGCCTGA+TGG - Chr8:90565687-90565706 None:intergenic 50.0%
ACCAGTTGTCTTGCTGGCAG+AGG + Chr8:90565345-90565364 MsG0880047767.01.T01:intron 55.0%
AGGGAAGCGACCTACCTTTG+AGG - Chr8:90563187-90563206 None:intergenic 55.0%
ATCCTTAACCAGTGTCCGGG+CGG - Chr8:90563769-90563788 None:intergenic 55.0%
ATTTCCCCACCTCGACCATC+AGG + Chr8:90565669-90565688 MsG0880047767.01.T01:intron 55.0%
GAGGGGATGGGGTCATTTAC+TGG + Chr8:90568051-90568070 MsG0880047767.01.T01:three_prime_UTR 55.0%
GGGGTCATTTACTGGGCAGT+GGG + Chr8:90568059-90568078 MsG0880047767.01.T01:three_prime_UTR 55.0%
TCCTCTGCCAGCAAGACAAC+TGG - Chr8:90565349-90565368 None:intergenic 55.0%
TGGGGTCATTTACTGGGCAG+TGG + Chr8:90568058-90568077 MsG0880047767.01.T01:three_prime_UTR 55.0%
TTACTGGGCAGTGGGACGAA+CGG + Chr8:90568067-90568086 MsG0880047767.01.T01:three_prime_UTR 55.0%
! CACACTGGGAGGTATGCTAC+TGG + Chr8:90565863-90565882 MsG0880047767.01.T01:CDS 55.0%
! GAGAGCGATTCGGACTCGAA+AGG - Chr8:90563162-90563181 None:intergenic 55.0%
! GCAAAGCATCCCGGAATGCT+GGG - Chr8:90566898-90566917 None:intergenic 55.0%
!! GGTTGAGTACCGATGGTGGT+TGG + Chr8:90568106-90568125 MsG0880047767.01.T01:three_prime_UTR 55.0%
!! TAAGGTTGGCCTGATGGTCG+AGG - Chr8:90565681-90565700 None:intergenic 55.0%
GAAATGCTAACCGGTGCCCC+CGG - Chr8:90563899-90563918 None:intergenic 60.0%
GTGATGGTTGGGGCCTTGAG+GGG + Chr8:90568034-90568053 MsG0880047767.01.T01:three_prime_UTR 60.0%
TCCTTAACCAGTGTCCGGGC+GGG - Chr8:90563768-90563787 None:intergenic 60.0%
TTGGCCTGATGGTCGAGGTG+GGG - Chr8:90565676-90565695 None:intergenic 60.0%
! GGCAAAGCATCCCGGAATGC+TGG - Chr8:90566899-90566918 None:intergenic 60.0%
! GGTGATGGTTGGGGCCTTGA+GGG + Chr8:90568033-90568052 MsG0880047767.01.T01:three_prime_UTR 60.0%
! GTTGGCCTGATGGTCGAGGT+GGG - Chr8:90565677-90565696 None:intergenic 60.0%
AACGGCGGCCGTTGCAGCAA+AGG + Chr8:90568085-90568104 MsG0880047767.01.T01:three_prime_UTR 65.0%
CATGCTAACCACTGCCCGCC+CGG + Chr8:90563751-90563770 MsG0880047767.01.T01:intron 65.0%
GCAGGGCCATCGACGAGAAC+AGG - Chr8:90564157-90564176 None:intergenic 65.0%
GGTTGGGGCCTTGAGGGGAT+GGG + Chr8:90568039-90568058 MsG0880047767.01.T01:three_prime_UTR 65.0%
GTTGGGGCCTTGAGGGGATG+GGG + Chr8:90568040-90568059 MsG0880047767.01.T01:three_prime_UTR 65.0%
TGGTTGGGGCCTTGAGGGGA+TGG + Chr8:90568038-90568057 MsG0880047767.01.T01:three_prime_UTR 65.0%
! CGGTGATGGTTGGGGCCTTG+AGG + Chr8:90568032-90568051 MsG0880047767.01.T01:three_prime_UTR 65.0%
!! GGTTGGCCTGATGGTCGAGG+TGG - Chr8:90565678-90565697 None:intergenic 65.0%
CTGGGCAGTGGGACGAACGG+CGG + Chr8:90568070-90568089 MsG0880047767.01.T01:three_prime_UTR 70.0%
CTTGCTCTCAGCCGCTGCGC+CGG - Chr8:90568003-90568022 None:intergenic 70.0%
! GCCCGCCCGGACACTGGTTA+AGG + Chr8:90563764-90563783 MsG0880047767.01.T01:intron 70.0%
ACCACTGCCCGCCCGGACAC+TGG + Chr8:90563758-90563777 MsG0880047767.01.T01:intron 75.0%
ACCAGTGTCCGGGCGGGCAG+TGG - Chr8:90563762-90563781 None:intergenic 75.0%
CGGCGCAGCGGCTGAGAGCA+AGG + Chr8:90568001-90568020 MsG0880047767.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 90563074 90568367 90563074 ID=MsG0880047767.01;Name=MsG0880047767.01
Chr8 mRNA 90563074 90568367 90563074 ID=MsG0880047767.01.T01;Parent=MsG0880047767.01;Name=MsG0880047767.01.T01;_AED=0.47;_eAED=0.47;_QI=0|1|0.90|1|0.8|0.72|11|485|228
Chr8 exon 90567135 90567238 90567135 ID=MsG0880047767.01.T01:exon:18889;Parent=MsG0880047767.01.T01
Chr8 exon 90568009 90568367 90568009 ID=MsG0880047767.01.T01:exon:18890;Parent=MsG0880047767.01.T01
Chr8 CDS 90563074 90563191 90563074 ID=MsG0880047767.01.T01:cds;Parent=MsG0880047767.01.T01
Chr8 CDS 90563971 90564027 90563971 ID=MsG0880047767.01.T01:cds;Parent=MsG0880047767.01.T01
Chr8 CDS 90564122 90564207 90564122 ID=MsG0880047767.01.T01:cds;Parent=MsG0880047767.01.T01
Chr8 CDS 90564282 90564356 90564282 ID=MsG0880047767.01.T01:cds;Parent=MsG0880047767.01.T01
Chr8 CDS 90564550 90564603 90564550 ID=MsG0880047767.01.T01:cds;Parent=MsG0880047767.01.T01
Chr8 CDS 90564749 90564824 90564749 ID=MsG0880047767.01.T01:cds;Parent=MsG0880047767.01.T01
Chr8 CDS 90565840 90565901 90565840 ID=MsG0880047767.01.T01:cds;Parent=MsG0880047767.01.T01
Chr8 CDS 90566205 90566264 90566205 ID=MsG0880047767.01.T01:cds;Parent=MsG0880047767.01.T01
Chr8 CDS 90566848 90566946 90566848 ID=MsG0880047767.01.T01:cds;Parent=MsG0880047767.01.T01
Chr8 three_prime_UTR 90566947 90566968 90566947 ID=MsG0880047767.01.T01:three_prime_utr;Parent=MsG0880047767.01.T01
Chr8 three_prime_UTR 90567135 90567238 90567135 ID=MsG0880047767.01.T01:three_prime_utr;Parent=MsG0880047767.01.T01
Chr8 three_prime_UTR 90568009 90568367 90568009 ID=MsG0880047767.01.T01:three_prime_utr;Parent=MsG0880047767.01.T01
Chr8 mRNA 90563074 90567432 90563074 ID=MsG0880047767.01.T02;Parent=MsG0880047767.01;Name=MsG0880047767.01.T02;_AED=0.48;_eAED=0.48;_QI=0|1|0.9|1|0.88|0.8|10|320|228
Chr8 exon 90567135 90567432 90567135 ID=MsG0880047767.01.T02:exon:18891;Parent=MsG0880047767.01.T02
Chr8 CDS 90563074 90563191 90563074 ID=MsG0880047767.01.T02:cds;Parent=MsG0880047767.01.T02
Chr8 CDS 90563971 90564027 90563971 ID=MsG0880047767.01.T02:cds;Parent=MsG0880047767.01.T02
Chr8 CDS 90564122 90564207 90564122 ID=MsG0880047767.01.T02:cds;Parent=MsG0880047767.01.T02
Chr8 CDS 90564282 90564356 90564282 ID=MsG0880047767.01.T02:cds;Parent=MsG0880047767.01.T02
Chr8 CDS 90564550 90564603 90564550 ID=MsG0880047767.01.T02:cds;Parent=MsG0880047767.01.T02
Chr8 CDS 90564749 90564824 90564749 ID=MsG0880047767.01.T02:cds;Parent=MsG0880047767.01.T02
Chr8 CDS 90565840 90565901 90565840 ID=MsG0880047767.01.T02:cds;Parent=MsG0880047767.01.T02
Chr8 CDS 90566205 90566264 90566205 ID=MsG0880047767.01.T02:cds;Parent=MsG0880047767.01.T02
Chr8 CDS 90566848 90566946 90566848 ID=MsG0880047767.01.T02:cds;Parent=MsG0880047767.01.T02
Chr8 three_prime_UTR 90566947 90566968 90566947 ID=MsG0880047767.01.T02:three_prime_utr;Parent=MsG0880047767.01.T02
Chr8 three_prime_UTR 90567135 90567432 90567135 ID=MsG0880047767.01.T02:three_prime_utr;Parent=MsG0880047767.01.T02
Gene Sequence

>MsG0880047767.01.T02

TTGAACAAGGCAAACGCAAGTGTTATTGTTGAAGAAGAACAAGAACAACAGCTGATCCTGTATTCGTATTGGAGGAGTTCGTGTTCCTTTCGAGTCCGAATCGCTCTCAACCTCAAAGGTCTCAAATATGAGTACAAAGCAGTTAATCTGTTGAAGGGAGAACAATCTCATCCTGAGTTTCTCCAGCTCAACCCTGTTGGTTTTGTTCCTGTTCTCGTCGATGGCCCTGCTGTTATTTTTGACTCTTTCGCTATTATCATGTATTTGGAGGATAAGTATCCTCAACAACATCCTTTGCTCCCTACTGATATTCACAAAAGGGCTATCAATTTTCAGGCTGTCAGTATTGTTTCTTCATCAATACAACCCCTTCATAACCTAAATCTCCTGAAGTACATTGAGGGAAAAGTTGGCCCTGATGAAAAACTTCCATGGGTCCAGAATGTAATCAAAAAAGGCTTCACAGCCCTTGAAAAGCTATTGAAAGAACACACTGGGAGGTATGCTACTGGAGACGAAGTTTTCATGGCGGATATATTTTTAGCACCTCAGTTACATGCTGCATCTAAGAGATTCAACATTCACATGAATGAGTTTCCTATTCTATCAAGATTACATGAGACATATTATGAGATCCCAGCATTCCGGGATGCTTTGCCAGAGAATCAGCCAGATGCAGTAGGCTAG

>MsG0880047767.01.T01

TTGAACAAGGCAAACGCAAGTGTTATTGTTGAAGAAGAACAAGAACAACAGCTGATCCTGTATTCGTATTGGAGGAGTTCGTGTTCCTTTCGAGTCCGAATCGCTCTCAACCTCAAAGGTCTCAAATATGAGTACAAAGCAGTTAATCTGTTGAAGGGAGAACAATCTCATCCTGAGTTTCTCCAGCTCAACCCTGTTGGTTTTGTTCCTGTTCTCGTCGATGGCCCTGCTGTTATTTTTGACTCTTTCGCTATTATCATGTATTTGGAGGATAAGTATCCTCAACAACATCCTTTGCTCCCTACTGATATTCACAAAAGGGCTATCAATTTTCAGGCTGTCAGTATTGTTTCTTCATCAATACAACCCCTTCATAACCTAAATCTCCTGAAGTACATTGAGGGAAAAGTTGGCCCTGATGAAAAACTTCCATGGGTCCAGAATGTAATCAAAAAAGGCTTCACAGCCCTTGAAAAGCTATTGAAAGAACACACTGGGAGGTATGCTACTGGAGACGAAGTTTTCATGGCGGATATATTTTTAGCACCTCAGTTACATGCTGCATCTAAGAGATTCAACATTCACATGAATGAGTTTCCTATTCTATCAAGATTACATGAGACATATTATGAGATCCCAGCATTCCGGGATGCTTTGCCAGAGAATCAGCCAGATGCAGTAGGCTAG
Protein sequence

>MsG0880047767.01.T02

LNKANASVIVEEEQEQQLILYSYWRSSCSFRVRIALNLKGLKYEYKAVNLLKGEQSHPEFLQLNPVGFVPVLVDGPAVIFDSFAIIMYLEDKYPQQHPLLPTDIHKRAINFQAVSIVSSSIQPLHNLNLLKYIEGKVGPDEKLPWVQNVIKKGFTALEKLLKEHTGRYATGDEVFMADIFLAPQLHAASKRFNIHMNEFPILSRLHETYYEIPAFRDALPENQPDAVG*

>MsG0880047767.01.T01

LNKANASVIVEEEQEQQLILYSYWRSSCSFRVRIALNLKGLKYEYKAVNLLKGEQSHPEFLQLNPVGFVPVLVDGPAVIFDSFAIIMYLEDKYPQQHPLLPTDIHKRAINFQAVSIVSSSIQPLHNLNLLKYIEGKVGPDEKLPWVQNVIKKGFTALEKLLKEHTGRYATGDEVFMADIFLAPQLHAASKRFNIHMNEFPILSRLHETYYEIPAFRDALPENQPDAVG*