Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038923.01.T01 | XP_003623174.1 | 91.163 | 215 | 19 | 0 | 1 | 215 | 1 | 215 | 1.94E-140 | 402 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038923.01.T01 | P32110 | 71.296 | 216 | 61 | 1 | 1 | 215 | 1 | 216 | 1.74E-110 | 319 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038923.01.T01 | B7FN12 | 91.163 | 215 | 19 | 0 | 1 | 215 | 1 | 215 | 9.27e-141 | 402 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048036.01 | MsG0780038923.01 | 0.814849 | 1.249227e-51 | 8.475597e-49 |
MsG0080048347.01 | MsG0780038923.01 | 0.819159 | 1.344151e-52 | 1.026347e-49 |
MsG0080048352.01 | MsG0780038923.01 | 0.813784 | 2.148036e-51 | 1.415954e-48 |
MsG0080048904.01 | MsG0780038923.01 | 0.805226 | 1.478693e-49 | 7.780448e-47 |
MsG0080049066.01 | MsG0780038923.01 | -0.801378 | 9.264158e-49 | 4.417491e-46 |
MsG0180000440.01 | MsG0780038923.01 | 0.820098 | 8.206874e-53 | 6.433603e-50 |
MsG0180002274.01 | MsG0780038923.01 | 0.820458 | 6.785759e-53 | 5.372525e-50 |
MsG0180003757.01 | MsG0780038923.01 | -0.813418 | 2.586121e-51 | 1.687929e-48 |
MsG0180004777.01 | MsG0780038923.01 | 0.865439 | 5.902736e-65 | 1.920434e-61 |
MsG0180004919.01 | MsG0780038923.01 | 0.815420 | 9.327794e-52 | 6.427979e-49 |
MsG0180004941.01 | MsG0780038923.01 | 0.834061 | 3.726527e-56 | 4.372500e-53 |
MsG0180004942.01 | MsG0780038923.01 | 0.817038 | 4.055787e-52 | 2.921565e-49 |
MsG0180005328.01 | MsG0780038923.01 | 0.803843 | 2.872279e-49 | 1.458561e-46 |
MsG0180005356.01 | MsG0780038923.01 | 0.803423 | 3.511393e-49 | 1.763890e-46 |
MsG0180005357.01 | MsG0780038923.01 | 0.800956 | 1.130047e-48 | 5.331633e-46 |
MsG0180005542.01 | MsG0780038923.01 | 0.817381 | 3.395769e-52 | 2.469277e-49 |
MsG0180005873.01 | MsG0780038923.01 | 0.802431 | 5.629583e-49 | 2.757232e-46 |
MsG0280006414.01 | MsG0780038923.01 | 0.805874 | 1.081019e-49 | 5.783771e-47 |
MsG0280010802.01 | MsG0780038923.01 | 0.800391 | 1.473673e-48 | 6.853619e-46 |
MsG0280011165.01 | MsG0780038923.01 | 0.813899 | 2.026365e-51 | 1.339956e-48 |
MsG0280011193.01 | MsG0780038923.01 | 0.805482 | 1.306807e-49 | 6.921524e-47 |
MsG0280011203.01 | MsG0780038923.01 | 0.804130 | 2.504436e-49 | 1.281092e-46 |
MsG0280011299.01 | MsG0780038923.01 | -0.804919 | 1.714669e-49 | 8.951970e-47 |
MsG0280011301.01 | MsG0780038923.01 | -0.803207 | 3.892581e-49 | 1.944493e-46 |
MsG0380011613.01 | MsG0780038923.01 | 0.813371 | 2.647640e-51 | 1.725946e-48 |
MsG0380013100.01 | MsG0780038923.01 | 0.815215 | 1.036130e-51 | 7.099520e-49 |
MsG0380013272.01 | MsG0780038923.01 | 0.842889 | 1.962463e-58 | 3.017569e-55 |
MsG0380013278.01 | MsG0780038923.01 | 0.823588 | 1.277860e-53 | 1.104952e-50 |
MsG0680030719.01 | MsG0780038923.01 | 0.842548 | 2.418256e-58 | 3.679385e-55 |
MsG0680031429.01 | MsG0780038923.01 | 0.833887 | 4.118408e-56 | 4.807518e-53 |
MsG0680034229.01 | MsG0780038923.01 | -0.810821 | 9.524131e-51 | 5.800202e-48 |
MsG0680034852.01 | MsG0780038923.01 | 0.816564 | 5.182307e-52 | 3.684747e-49 |
MsG0680035496.01 | MsG0780038923.01 | 0.802078 | 6.654774e-49 | 3.230038e-46 |
MsG0480018628.01 | MsG0780038923.01 | -0.806840 | 6.767060e-50 | 3.711083e-47 |
MsG0480019295.01 | MsG0780038923.01 | 0.810413 | 1.166906e-50 | 7.029128e-48 |
MsG0480020784.01 | MsG0780038923.01 | 0.803334 | 3.662677e-49 | 1.835633e-46 |
MsG0480022319.01 | MsG0780038923.01 | 0.805697 | 1.177640e-49 | 6.272457e-47 |
MsG0480022638.01 | MsG0780038923.01 | 0.832765 | 7.843371e-56 | 8.852449e-53 |
MsG0480022655.01 | MsG0780038923.01 | 0.813950 | 1.974929e-51 | 1.307691e-48 |
MsG0480022812.01 | MsG0780038923.01 | 0.800675 | 1.289662e-48 | 6.041293e-46 |
MsG0480023187.01 | MsG0780038923.01 | -0.809636 | 1.715644e-50 | 1.012703e-47 |
MsG0480023819.01 | MsG0780038923.01 | 0.813268 | 2.789842e-51 | 1.813382e-48 |
MsG0580024408.01 | MsG0780038923.01 | 0.802306 | 5.973789e-49 | 2.916581e-46 |
MsG0580025145.01 | MsG0780038923.01 | 0.814210 | 1.730181e-51 | 1.153727e-48 |
MsG0580025440.01 | MsG0780038923.01 | 0.848786 | 4.910064e-60 | 9.113461e-57 |
MsG0580025683.01 | MsG0780038923.01 | 0.800414 | 1.457650e-48 | 6.783209e-46 |
MsG0380014934.01 | MsG0780038923.01 | 0.826559 | 2.538289e-54 | 2.388620e-51 |
MsG0380015009.01 | MsG0780038923.01 | 0.820946 | 5.242793e-53 | 4.207620e-50 |
MsG0380015010.01 | MsG0780038923.01 | 0.858573 | 7.510044e-63 | 1.925273e-59 |
MsG0380015070.01 | MsG0780038923.01 | 0.812236 | 4.692645e-51 | 2.967595e-48 |
MsG0380015369.01 | MsG0780038923.01 | 0.811762 | 5.952698e-51 | 3.716411e-48 |
MsG0380015616.01 | MsG0780038923.01 | 0.824538 | 7.645549e-54 | 6.791789e-51 |
MsG0380015629.01 | MsG0780038923.01 | 0.825941 | 3.561009e-54 | 3.292883e-51 |
MsG0380016261.01 | MsG0780038923.01 | 0.804511 | 2.086128e-49 | 1.077577e-46 |
MsG0380016270.01 | MsG0780038923.01 | 0.816486 | 5.394911e-52 | 3.827607e-49 |
MsG0380016801.01 | MsG0780038923.01 | 0.829406 | 5.239521e-55 | 5.357899e-52 |
MsG0380017115.01 | MsG0780038923.01 | 0.805464 | 1.318436e-49 | 6.980044e-47 |
MsG0380017151.01 | MsG0780038923.01 | 0.818963 | 1.489476e-52 | 1.131335e-49 |
MsG0380017579.01 | MsG0780038923.01 | 0.833048 | 6.668169e-56 | 7.590942e-53 |
MsG0380017690.01 | MsG0780038923.01 | 0.825612 | 4.263435e-54 | 3.905408e-51 |
MsG0380018026.01 | MsG0780038923.01 | 0.824106 | 9.660198e-54 | 8.475787e-51 |
MsG0580026095.01 | MsG0780038923.01 | 0.828918 | 6.882264e-55 | 6.936571e-52 |
MsG0580026427.01 | MsG0780038923.01 | 0.800869 | 1.177283e-48 | 5.542141e-46 |
MsG0580027733.01 | MsG0780038923.01 | 0.808570 | 2.902351e-50 | 1.665201e-47 |
MsG0580028999.01 | MsG0780038923.01 | 0.801188 | 1.012826e-48 | 4.806573e-46 |
MsG0580030145.01 | MsG0780038923.01 | 0.801350 | 9.386786e-49 | 4.472899e-46 |
MsG0680030336.01 | MsG0780038923.01 | 0.807828 | 4.177788e-50 | 2.350634e-47 |
MsG0280006649.01 | MsG0780038923.01 | 0.812945 | 3.283383e-51 | 2.115641e-48 |
MsG0280007216.01 | MsG0780038923.01 | 0.836365 | 9.765442e-57 | 1.228016e-53 |
MsG0280008405.01 | MsG0780038923.01 | 0.834147 | 3.545079e-56 | 4.169956e-53 |
MsG0280009167.01 | MsG0780038923.01 | 0.813153 | 2.956607e-51 | 1.915734e-48 |
MsG0680035779.01 | MsG0780038923.01 | 0.820736 | 5.860478e-53 | 4.675367e-50 |
MsG0680035841.01 | MsG0780038923.01 | 0.823173 | 1.597392e-53 | 1.365153e-50 |
MsG0780036513.01 | MsG0780038923.01 | 0.805725 | 1.162148e-49 | 6.194297e-47 |
MsG0780036661.01 | MsG0780038923.01 | 0.818338 | 2.065185e-52 | 1.541680e-49 |
MsG0780038123.01 | MsG0780038923.01 | 0.808373 | 3.198063e-50 | 1.825505e-47 |
MsG0780038922.01 | MsG0780038923.01 | 0.853424 | 2.411635e-61 | 5.208750e-58 |
MsG0780038923.01 | MsG0780038924.01 | 0.851201 | 1.035502e-60 | 2.079917e-57 |
MsG0780038923.01 | MsG0780038925.01 | 0.808527 | 2.964108e-50 | 1.698798e-47 |
MsG0780038923.01 | MsG0780038939.01 | 0.819690 | 1.017538e-52 | 7.885263e-50 |
MsG0780038923.01 | MsG0780038992.01 | 0.817737 | 2.823471e-52 | 2.073197e-49 |
MsG0780038923.01 | MsG0780039576.01 | 0.807093 | 5.982688e-50 | 3.302376e-47 |
MsG0780038923.01 | MsG0780039702.01 | 0.804441 | 2.156912e-49 | 1.112173e-46 |
MsG0780038923.01 | MsG0780039877.01 | 0.806349 | 8.589252e-50 | 4.651326e-47 |
MsG0780038923.01 | MsG0780039968.01 | 0.805982 | 1.026030e-49 | 5.504930e-47 |
MsG0780038923.01 | MsG0780040481.01 | 0.812959 | 3.260503e-51 | 2.101633e-48 |
MsG0780038923.01 | MsG0780040806.01 | 0.818612 | 1.790090e-52 | 1.346329e-49 |
MsG0780038923.01 | MsG0780041316.01 | 0.803912 | 2.779918e-49 | 1.414181e-46 |
MsG0780038923.01 | MsG0780041556.01 | 0.846449 | 2.157617e-59 | 3.715374e-56 |
MsG0780038923.01 | MsG0780041620.01 | -0.813837 | 2.090933e-51 | 1.380289e-48 |
MsG0780038923.01 | MsG0780041720.01 | -0.803569 | 3.273974e-49 | 1.650937e-46 |
MsG0780038923.01 | MsG0880041855.01 | -0.801032 | 1.089997e-48 | 5.152803e-46 |
MsG0780038923.01 | MsG0880042694.01 | 0.843031 | 1.798530e-58 | 2.777768e-55 |
MsG0780038923.01 | MsG0880042740.01 | 0.810401 | 1.174243e-50 | 7.070880e-48 |
MsG0780038923.01 | MsG0880042858.01 | -0.800694 | 1.278266e-48 | 5.990565e-46 |
MsG0780038923.01 | MsG0880043185.01 | 0.822954 | 1.796344e-53 | 1.525731e-50 |
MsG0780038923.01 | MsG0880043364.01 | 0.821752 | 3.416932e-53 | 2.804451e-50 |
MsG0780038923.01 | MsG0880043828.01 | 0.801627 | 8.236822e-49 | 3.952210e-46 |
MsG0780038923.01 | MsG0880044339.01 | -0.809006 | 2.341600e-50 | 1.359009e-47 |
MsG0780038923.01 | MsG0880044798.01 | 0.805863 | 1.086889e-49 | 5.813604e-47 |
MsG0780038923.01 | MsG0880045441.01 | 0.806862 | 6.694012e-50 | 3.673163e-47 |
MsG0780038923.01 | MsG0880045458.01 | 0.828959 | 6.727315e-55 | 6.788432e-52 |
MsG0780038923.01 | MsG0880045677.01 | 0.839706 | 1.349815e-57 | 1.879369e-54 |
MsG0780038923.01 | MsG0880046429.01 | 0.821347 | 4.236973e-53 | 3.438336e-50 |
MsG0780038923.01 | MsG0880046832.01 | 0.807895 | 4.041886e-50 | 2.278140e-47 |
MsG0780038923.01 | MsG0880046863.01 | 0.818973 | 1.482174e-52 | 1.126103e-49 |
MsG0780038923.01 | MsG0880046996.01 | 0.853991 | 1.657202e-61 | 3.647255e-58 |
MsG0780038923.01 | MsG0880047256.01 | 0.820224 | 7.680262e-53 | 6.040907e-50 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038923.01.T01 | MTR_7g065290 | 91.163 | 215 | 19 | 0 | 1 | 215 | 1 | 215 | 2.35e-144 | 402 |
MsG0780038923.01.T01 | MTR_7g065265 | 89.302 | 215 | 23 | 0 | 1 | 215 | 1 | 215 | 8.97e-141 | 393 |
MsG0780038923.01.T01 | MTR_7g065270 | 86.512 | 215 | 29 | 0 | 1 | 215 | 1 | 215 | 1.77e-136 | 382 |
MsG0780038923.01.T01 | MTR_7g065590 | 81.860 | 215 | 39 | 0 | 1 | 215 | 1 | 215 | 2.35e-129 | 364 |
MsG0780038923.01.T01 | MTR_7g065600 | 75.000 | 224 | 56 | 0 | 1 | 224 | 1 | 224 | 1.98e-125 | 354 |
MsG0780038923.01.T01 | MTR_7g065230 | 79.535 | 215 | 39 | 1 | 1 | 215 | 1 | 210 | 3.35e-123 | 348 |
MsG0780038923.01.T01 | MTR_7g065260 | 77.778 | 216 | 47 | 1 | 1 | 215 | 8 | 223 | 2.35e-113 | 324 |
MsG0780038923.01.T01 | MTR_7g065720 | 69.907 | 216 | 64 | 1 | 1 | 215 | 1 | 216 | 2.26e-108 | 311 |
MsG0780038923.01.T01 | MTR_7g065660 | 66.512 | 215 | 72 | 0 | 1 | 215 | 1 | 215 | 2.71e-107 | 308 |
MsG0780038923.01.T01 | MTR_7g065630 | 66.977 | 215 | 67 | 1 | 1 | 215 | 19 | 229 | 3.44e-104 | 301 |
MsG0780038923.01.T01 | MTR_7g065750 | 67.130 | 216 | 70 | 1 | 1 | 215 | 1 | 216 | 3.49e-104 | 300 |
MsG0780038923.01.T01 | MTR_4g019790 | 64.651 | 215 | 76 | 0 | 1 | 215 | 1 | 215 | 4.14e-103 | 298 |
MsG0780038923.01.T01 | MTR_7g065740 | 65.741 | 216 | 73 | 1 | 1 | 215 | 1 | 216 | 1.01e-102 | 296 |
MsG0780038923.01.T01 | MTR_4g019780 | 61.860 | 215 | 80 | 2 | 2 | 215 | 3 | 216 | 1.27e-95 | 278 |
MsG0780038923.01.T01 | MTR_7g065640 | 60.930 | 215 | 66 | 1 | 1 | 215 | 1 | 197 | 7.41e-94 | 273 |
MsG0780038923.01.T01 | MTR_7g065710 | 63.285 | 207 | 72 | 1 | 8 | 214 | 5 | 207 | 1.32e-93 | 273 |
MsG0780038923.01.T01 | MTR_7g065680 | 64.186 | 215 | 73 | 1 | 1 | 215 | 1 | 211 | 8.65e-90 | 264 |
MsG0780038923.01.T01 | MTR_7g065700 | 64.953 | 214 | 71 | 1 | 1 | 214 | 1 | 210 | 1.73e-89 | 263 |
MsG0780038923.01.T01 | MTR_6g080440 | 49.519 | 208 | 103 | 2 | 7 | 213 | 3 | 209 | 8.25e-68 | 208 |
MsG0780038923.01.T01 | MTR_1g090150 | 47.489 | 219 | 110 | 3 | 6 | 221 | 2 | 218 | 1.73e-65 | 202 |
MsG0780038923.01.T01 | MTR_3g099757 | 45.946 | 222 | 118 | 2 | 5 | 225 | 3 | 223 | 2.26e-62 | 194 |
MsG0780038923.01.T01 | MTR_8g087425 | 44.186 | 215 | 118 | 2 | 4 | 217 | 2 | 215 | 5.14e-60 | 188 |
MsG0780038923.01.T01 | MTR_8g087410 | 44.444 | 216 | 117 | 3 | 4 | 217 | 3 | 217 | 1.42e-56 | 179 |
MsG0780038923.01.T01 | MTR_1g115195 | 45.274 | 201 | 107 | 2 | 7 | 204 | 3 | 203 | 2.54e-56 | 179 |
MsG0780038923.01.T01 | MTR_5g040430 | 42.601 | 223 | 120 | 3 | 1 | 216 | 1 | 222 | 5.15e-56 | 178 |
MsG0780038923.01.T01 | MTR_1g090070 | 43.192 | 213 | 118 | 1 | 7 | 216 | 9 | 221 | 1.60e-53 | 172 |
MsG0780038923.01.T01 | MTR_4g059730 | 41.860 | 215 | 119 | 3 | 6 | 216 | 3 | 215 | 1.98e-52 | 169 |
MsG0780038923.01.T01 | MTR_5g037380 | 41.667 | 228 | 123 | 3 | 1 | 220 | 1 | 226 | 5.58e-52 | 168 |
MsG0780038923.01.T01 | MTR_1g090060 | 42.584 | 209 | 116 | 2 | 7 | 212 | 3 | 210 | 3.05e-51 | 166 |
MsG0780038923.01.T01 | MTR_1g090100 | 41.038 | 212 | 121 | 2 | 8 | 216 | 3 | 213 | 6.42e-50 | 162 |
MsG0780038923.01.T01 | MTR_1g090090 | 39.906 | 213 | 124 | 2 | 7 | 216 | 3 | 214 | 3.78e-49 | 160 |
MsG0780038923.01.T01 | MTR_8g061950 | 40.991 | 222 | 123 | 3 | 5 | 218 | 3 | 224 | 3.93e-49 | 160 |
MsG0780038923.01.T01 | MTR_3g467420 | 43.216 | 199 | 108 | 5 | 16 | 212 | 18 | 213 | 3.98e-45 | 150 |
MsG0780038923.01.T01 | MTR_2g070130 | 40.686 | 204 | 116 | 5 | 6 | 207 | 3 | 203 | 9.75e-45 | 149 |
MsG0780038923.01.T01 | MTR_2g070150 | 40.196 | 204 | 117 | 5 | 6 | 207 | 3 | 203 | 2.20e-44 | 147 |
MsG0780038923.01.T01 | MTR_3g467430 | 40.758 | 211 | 120 | 5 | 4 | 212 | 6 | 213 | 3.92e-43 | 145 |
MsG0780038923.01.T01 | MTR_2g070140 | 40.722 | 194 | 110 | 5 | 21 | 212 | 2 | 192 | 4.17e-43 | 144 |
MsG0780038923.01.T01 | MTR_4g124130 | 45.312 | 192 | 95 | 6 | 5 | 191 | 2 | 188 | 5.39e-43 | 144 |
MsG0780038923.01.T01 | MTR_2g070200 | 39.706 | 204 | 119 | 3 | 6 | 207 | 3 | 204 | 2.62e-42 | 143 |
MsG0780038923.01.T01 | MTR_2g070210 | 39.545 | 220 | 124 | 7 | 6 | 220 | 3 | 218 | 3.18e-42 | 142 |
MsG0780038923.01.T01 | MTR_2g070180 | 38.660 | 194 | 114 | 4 | 16 | 207 | 13 | 203 | 4.36e-41 | 139 |
MsG0780038923.01.T01 | MTR_8g056940 | 44.134 | 179 | 93 | 5 | 16 | 191 | 13 | 187 | 7.56e-41 | 139 |
MsG0780038923.01.T01 | MTR_2g070120 | 36.406 | 217 | 131 | 5 | 6 | 219 | 3 | 215 | 2.75e-40 | 137 |
MsG0780038923.01.T01 | MTR_2g070070 | 37.559 | 213 | 128 | 4 | 7 | 217 | 4 | 213 | 3.27e-37 | 130 |
MsG0780038923.01.T01 | MTR_2g070060 | 35.648 | 216 | 134 | 4 | 7 | 220 | 4 | 216 | 3.47e-36 | 127 |
MsG0780038923.01.T01 | MTR_5g076900 | 37.736 | 212 | 127 | 5 | 3 | 212 | 2 | 210 | 4.78e-36 | 127 |
MsG0780038923.01.T01 | MTR_0186s0030 | 47.328 | 131 | 65 | 3 | 16 | 144 | 13 | 141 | 2.18e-33 | 117 |
MsG0780038923.01.T01 | MTR_2g070110 | 37.255 | 204 | 122 | 4 | 16 | 217 | 13 | 212 | 1.69e-31 | 115 |
MsG0780038923.01.T01 | MTR_2g072120 | 46.154 | 65 | 34 | 1 | 51 | 114 | 2 | 66 | 1.88e-15 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038923.01.T01 | AT3G09270 | 55.760 | 217 | 92 | 4 | 3 | 216 | 2 | 217 | 8.19e-80 | 239 |
MsG0780038923.01.T01 | AT2G29420 | 48.131 | 214 | 109 | 2 | 3 | 215 | 5 | 217 | 1.40e-70 | 215 |
MsG0780038923.01.T01 | AT2G29490 | 48.571 | 210 | 103 | 4 | 1 | 207 | 1 | 208 | 7.69e-61 | 190 |
MsG0780038923.01.T01 | AT2G29450 | 48.792 | 207 | 104 | 2 | 3 | 207 | 2 | 208 | 9.56e-61 | 190 |
MsG0780038923.01.T01 | AT2G29460 | 46.411 | 209 | 109 | 3 | 1 | 207 | 1 | 208 | 1.75e-57 | 182 |
MsG0780038923.01.T01 | AT2G29480 | 47.368 | 209 | 107 | 3 | 1 | 207 | 1 | 208 | 2.19e-57 | 182 |
MsG0780038923.01.T01 | AT2G29440 | 46.411 | 209 | 108 | 4 | 1 | 207 | 1 | 207 | 7.76e-56 | 177 |
MsG0780038923.01.T01 | AT2G29470 | 45.498 | 211 | 109 | 5 | 1 | 207 | 1 | 209 | 3.31e-55 | 176 |
MsG0780038923.01.T01 | AT1G10370 | 41.176 | 221 | 121 | 3 | 1 | 214 | 1 | 219 | 1.67e-50 | 164 |
MsG0780038923.01.T01 | AT1G69930 | 38.813 | 219 | 128 | 2 | 2 | 214 | 7 | 225 | 4.27e-50 | 163 |
MsG0780038923.01.T01 | AT1G59700 | 43.694 | 222 | 117 | 4 | 5 | 218 | 4 | 225 | 1.01e-49 | 162 |
MsG0780038923.01.T01 | AT5G62480 | 40.179 | 224 | 123 | 3 | 8 | 221 | 9 | 231 | 2.28e-49 | 162 |
MsG0780038923.01.T01 | AT1G59670 | 42.308 | 208 | 112 | 3 | 5 | 204 | 4 | 211 | 2.73e-47 | 156 |
MsG0780038923.01.T01 | AT1G74590 | 37.991 | 229 | 135 | 3 | 1 | 223 | 1 | 228 | 5.08e-47 | 155 |
MsG0780038923.01.T01 | AT1G78380 | 40.845 | 213 | 121 | 4 | 7 | 217 | 4 | 213 | 8.58e-47 | 154 |
MsG0780038923.01.T01 | AT1G27130 | 39.189 | 222 | 126 | 4 | 1 | 214 | 1 | 221 | 1.54e-46 | 154 |
MsG0780038923.01.T01 | AT1G78340 | 41.096 | 219 | 123 | 5 | 6 | 221 | 3 | 218 | 2.68e-45 | 150 |
MsG0780038923.01.T01 | AT1G78370 | 39.196 | 199 | 116 | 4 | 16 | 212 | 13 | 208 | 6.33e-45 | 149 |
MsG0780038923.01.T01 | AT1G10360 | 37.864 | 206 | 121 | 2 | 6 | 204 | 4 | 209 | 1.15e-44 | 149 |
MsG0780038923.01.T01 | AT1G17170 | 40.191 | 209 | 119 | 4 | 6 | 212 | 3 | 207 | 7.81e-44 | 147 |
MsG0780038923.01.T01 | AT1G78320 | 39.904 | 208 | 120 | 4 | 5 | 210 | 2 | 206 | 1.67e-43 | 146 |
MsG0780038923.01.T01 | AT1G53680 | 39.524 | 210 | 122 | 4 | 1 | 207 | 1 | 208 | 4.35e-42 | 142 |
MsG0780038923.01.T01 | AT1G27140 | 37.500 | 216 | 125 | 4 | 1 | 207 | 1 | 215 | 5.95e-42 | 142 |
MsG0780038923.01.T01 | AT1G69920 | 37.946 | 224 | 129 | 4 | 1 | 214 | 26 | 249 | 7.47e-42 | 143 |
MsG0780038923.01.T01 | AT1G17180 | 37.850 | 214 | 128 | 4 | 6 | 217 | 3 | 213 | 1.43e-41 | 141 |
MsG0780038923.01.T01 | AT1G78360 | 39.815 | 216 | 124 | 5 | 7 | 219 | 4 | 216 | 1.07e-39 | 136 |
MsG0780038923.01.T01 | AT3G43800 | 37.387 | 222 | 129 | 7 | 4 | 218 | 2 | 220 | 3.29e-39 | 135 |
MsG0780038923.01.T01 | AT1G17190 | 42.135 | 178 | 98 | 4 | 16 | 191 | 14 | 188 | 7.48e-38 | 131 |
MsG0780038923.01.T01 | AT5G62480 | 31.839 | 223 | 117 | 3 | 8 | 221 | 9 | 205 | 2.06e-30 | 112 |
MsG0780038923.01.T01 | AT5G62480 | 31.839 | 223 | 116 | 3 | 8 | 221 | 9 | 204 | 2.46e-30 | 112 |
MsG0780038923.01.T01 | AT1G78320 | 32.367 | 207 | 110 | 4 | 5 | 210 | 2 | 179 | 5.54e-26 | 100 |
MsG0780038923.01.T01 | AT2G02380 | 26.512 | 215 | 139 | 7 | 5 | 207 | 9 | 216 | 1.78e-11 | 62.0 |
Find 49 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCAAAATAGATCAATTTA+AGG | 0.159458 | 7:-55399248 | None:intergenic |
AAAGAGCCTTGGCACGTTTC+TGG | 0.164876 | 7:-55400232 | MsG0780038923.01.T01:CDS |
TACCTTGTCATCTATGAAAT+TGG | 0.177857 | 7:+55400208 | None:intergenic |
TTGGATGATTGTTGAATTCT+TGG | 0.233990 | 7:+55399339 | None:intergenic |
CCAAGTGCTTCTTGTATAAC+AGG | 0.302176 | 7:+55399410 | None:intergenic |
TTCTTTGGTGGGGAGGATAT+TGG | 0.313435 | 7:-55399473 | MsG0780038923.01.T01:CDS |
TAAGGATCATTAGGCAAGAT+AGG | 0.313856 | 7:+55400257 | None:intergenic |
CTCTACGATGGCATCAAATA+AGG | 0.319615 | 7:-55400516 | None:intergenic |
TGGCTCCAATTGTAAAGCTT+TGG | 0.323925 | 7:+55399359 | None:intergenic |
GAGCTCAAGGACAAATTCTT+TGG | 0.339009 | 7:-55399488 | MsG0780038923.01.T01:CDS |
ACAGGAACTTTCTTATAAAC+AGG | 0.340787 | 7:+55400356 | None:intergenic |
GACTTTCATAGCTTTATAGA+AGG | 0.367540 | 7:+55399277 | None:intergenic |
CAACAATCATCCAATTGTTA+AGG | 0.374730 | 7:-55399330 | MsG0780038923.01.T01:CDS |
GTTCCTGTATTAGTTCATAA+TGG | 0.400419 | 7:-55400341 | MsG0780038923.01.T01:CDS |
AATTTCCAAAGCTTTACAAT+TGG | 0.423886 | 7:-55399364 | MsG0780038923.01.T01:CDS |
ATCTCCACCCTTGTTACAAA+TGG | 0.430811 | 7:+55400461 | None:intergenic |
GCCTCCTAGAGAGATCCTTT+TGG | 0.438799 | 7:-55399300 | MsG0780038923.01.T01:CDS |
GGAGATTGCTCTAAAATTGA+AGG | 0.444678 | 7:-55400444 | MsG0780038923.01.T01:CDS |
ACAAGCTTTCCGTACACCAT+TGG | 0.494016 | 7:+55399583 | None:intergenic |
TTGCCATTATGAACTAATAC+AGG | 0.495358 | 7:+55400338 | None:intergenic |
ATCACAAGTGACTCTGCTAT+AGG | 0.496284 | 7:+55400314 | None:intergenic |
AAGCTTTGGAAATTCTTCAC+TGG | 0.499393 | 7:+55399373 | None:intergenic |
AATATGAGCAAGAAAAGGTT+GGG | 0.503590 | 7:-55400409 | MsG0780038923.01.T01:CDS |
TTGAGTATATTGATGAGACT+TGG | 0.504629 | 7:-55400289 | MsG0780038923.01.T01:CDS |
AAGGATCATTAGGCAAGATA+GGG | 0.505915 | 7:+55400258 | None:intergenic |
TAGCTTTATAGAAGGCCAAA+AGG | 0.507889 | 7:+55399285 | None:intergenic |
CTCAAGGACAAATTCTTTGG+TGG | 0.512720 | 7:-55399485 | MsG0780038923.01.T01:CDS |
AAATATGAGCAAGAAAAGGT+TGG | 0.516900 | 7:-55400410 | MsG0780038923.01.T01:CDS |
TCAAGGACAAATTCTTTGGT+GGG | 0.523453 | 7:-55399484 | MsG0780038923.01.T01:CDS |
AGAACGTGAGAAGAGTATTG+AGG | 0.526929 | 7:-55399543 | MsG0780038923.01.T01:CDS |
CCTGTTATACAAGAAGCACT+TGG | 0.528703 | 7:-55399410 | MsG0780038923.01.T01:CDS |
ATTTCTTGAGAATGAGCTCA+AGG | 0.546430 | 7:-55399501 | MsG0780038923.01.T01:CDS |
ATCAAATAAGGAAGAGGTGA+AGG | 0.549693 | 7:-55400504 | MsG0780038923.01.T01:CDS |
ATACAAATATGAGCAAGAAA+AGG | 0.550926 | 7:-55400414 | MsG0780038923.01.T01:CDS |
GAGTATTGAGGAAACAAAAG+AGG | 0.559224 | 7:-55399531 | MsG0780038923.01.T01:CDS |
TGATCCTTATAAAAGAGCCT+TGG | 0.561258 | 7:-55400243 | MsG0780038923.01.T01:CDS |
ACCAGTGCTCCAATGGTGTA+CGG | 0.565464 | 7:-55399592 | MsG0780038923.01.T01:intron |
AAGGCCAAAAGGATCTCTCT+AGG | 0.571190 | 7:+55399296 | None:intergenic |
TGGAAAGTCCATTTGTAACA+AGG | 0.573831 | 7:-55400469 | MsG0780038923.01.T01:CDS |
CAAGGACAAATTCTTTGGTG+GGG | 0.574827 | 7:-55399483 | MsG0780038923.01.T01:CDS |
GATGGCATCAAATAAGGAAG+AGG | 0.575114 | 7:-55400510 | MsG0780038923.01.T01:CDS |
GGACAAATTCTTTGGTGGGG+AGG | 0.579613 | 7:-55399480 | MsG0780038923.01.T01:CDS |
TTGTGAGACCAGTGCTCCAA+TGG | 0.602330 | 7:-55399599 | MsG0780038923.01.T01:intron |
GGAAAGTCCATTTGTAACAA+GGG | 0.613221 | 7:-55400468 | MsG0780038923.01.T01:CDS |
GAGATTGCTCTAAAATTGAA+GGG | 0.615792 | 7:-55400443 | MsG0780038923.01.T01:CDS |
GTCCAATTTCATAGATGACA+AGG | 0.633419 | 7:-55400210 | MsG0780038923.01.T01:intron |
AAGTCCATTTGTAACAAGGG+TGG | 0.642673 | 7:-55400465 | MsG0780038923.01.T01:CDS |
ATTGGACCAGAAACGTGCCA+AGG | 0.673197 | 7:+55400226 | None:intergenic |
GCCAAAAGGATCTCTCTAGG+AGG | 0.687746 | 7:+55399299 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATTATTATTATTTTTTA+AGG | - | Chr7:55399632-55399651 | MsG0780038923.01.T01:intron | 0.0% |
!!! | GATTAACAAAATAATTTTTT+TGG | - | Chr7:55399755-55399774 | MsG0780038923.01.T01:intron | 10.0% |
!! | TTTGTTAAAAAACAAACAAT+TGG | + | Chr7:55399951-55399970 | None:intergenic | 15.0% |
!!! | AAGTTAATTGATTTGTTTTT+AGG | + | Chr7:55400083-55400102 | None:intergenic | 15.0% |
!!! | TGAAACAATTTTTAATCAAA+TGG | + | Chr7:55399861-55399880 | None:intergenic | 15.0% |
!! | ATTCGATTATTAGATTATCA+AGG | - | Chr7:55399787-55399806 | MsG0780038923.01.T01:intron | 20.0% |
!! | TTCGATTATTAGATTATCAA+GGG | - | Chr7:55399788-55399807 | MsG0780038923.01.T01:intron | 20.0% |
!!! | TTGATAATCTAATAATCGAA+TGG | + | Chr7:55399788-55399807 | None:intergenic | 20.0% |
!!! | TTTAGGTTAAATATAACATG+TGG | + | Chr7:55400066-55400085 | None:intergenic | 20.0% |
! | AAAAAACAAACAATTGGACT+CGG | + | Chr7:55399945-55399964 | None:intergenic | 25.0% |
! | AATTTCCAAAGCTTTACAAT+TGG | - | Chr7:55400395-55400414 | MsG0780038923.01.T01:CDS | 25.0% |
! | ACATGGATAAAAATAGAAGA+GGG | + | Chr7:55399584-55399603 | None:intergenic | 25.0% |
! | ATACAAATATGAGCAAGAAA+AGG | - | Chr7:55399345-55399364 | MsG0780038923.01.T01:CDS | 25.0% |
! | TAAAGTTGGATATATGAACT+TGG | + | Chr7:55399616-55399635 | None:intergenic | 25.0% |
! | TACATGGATAAAAATAGAAG+AGG | + | Chr7:55399585-55399604 | None:intergenic | 25.0% |
! | TATTTAGTGCTAACTAAAGT+TGG | + | Chr7:55399663-55399682 | None:intergenic | 25.0% |
!! | ATGGTACTTTATTTACCTTT+CGG | + | Chr7:55399842-55399861 | None:intergenic | 25.0% |
!! | CTAAGTAAATTTGAGATCTT+AGG | - | Chr7:55399688-55399707 | MsG0780038923.01.T01:intron | 25.0% |
!!! | CTTTTTTTTGTTGACAACAT+GGG | + | Chr7:55399726-55399745 | None:intergenic | 25.0% |
!!! | TCTTTTTTTTGTTGACAACA+TGG | + | Chr7:55399727-55399746 | None:intergenic | 25.0% |
!!! | TGAGAAAGTATCTAACTTAA+AGG | - | Chr7:55400039-55400058 | MsG0780038923.01.T01:intron | 25.0% |
AAAAACAAACAATTGGACTC+GGG | + | Chr7:55399944-55399963 | None:intergenic | 30.0% | |
AAATATGAGCAAGAAAAGGT+TGG | - | Chr7:55399349-55399368 | MsG0780038923.01.T01:CDS | 30.0% | |
AAGAATCTGAATTCGATTTC+TGG | + | Chr7:55399885-55399904 | None:intergenic | 30.0% | |
AATATGAGCAAGAAAAGGTT+GGG | - | Chr7:55399350-55399369 | MsG0780038923.01.T01:CDS | 30.0% | |
AATCCAAAAAGCTATGAGTA+CGG | + | Chr7:55400329-55400348 | None:intergenic | 30.0% | |
ACAGGAACTTTCTTATAAAC+AGG | + | Chr7:55399406-55399425 | None:intergenic | 30.0% | |
AGAATCTGAATTCGATTTCT+GGG | + | Chr7:55399884-55399903 | None:intergenic | 30.0% | |
CAACAATCATCCAATTGTTA+AGG | - | Chr7:55400429-55400448 | MsG0780038923.01.T01:CDS | 30.0% | |
GAGTAATGAGTTCCATAAAA+TGG | + | Chr7:55399920-55399939 | None:intergenic | 30.0% | |
GTTCCTGTATTAGTTCATAA+TGG | - | Chr7:55399418-55399437 | MsG0780038923.01.T01:CDS | 30.0% | |
TACCTTGTCATCTATGAAAT+TGG | + | Chr7:55399554-55399573 | None:intergenic | 30.0% | |
TTGAGTATATTGATGAGACT+TGG | - | Chr7:55399470-55399489 | MsG0780038923.01.T01:CDS | 30.0% | |
TTGCCATTATGAACTAATAC+AGG | + | Chr7:55399424-55399443 | None:intergenic | 30.0% | |
TTGGATGATTGTTGAATTCT+TGG | + | Chr7:55400423-55400442 | None:intergenic | 30.0% | |
! | GATCTTGATAATTCGAACTT+CGG | - | Chr7:55399816-55399835 | MsG0780038923.01.T01:intron | 30.0% |
! | GCTCTTTTATAAGGATCATT+AGG | + | Chr7:55399514-55399533 | None:intergenic | 30.0% |
! | GGCAATTTTTCCTTAACAAT+TGG | + | Chr7:55400442-55400461 | None:intergenic | 30.0% |
!! | CTAAACAATTCGCCATTTTA+TGG | - | Chr7:55399905-55399924 | MsG0780038923.01.T01:intron | 30.0% |
!! | GACTTTCATAGCTTTATAGA+AGG | + | Chr7:55400485-55400504 | None:intergenic | 30.0% |
!! | GAGATTGCTCTAAAATTGAA+GGG | - | Chr7:55399316-55399335 | MsG0780038923.01.T01:CDS | 30.0% |
AAGGATCATTAGGCAAGATA+GGG | + | Chr7:55399504-55399523 | None:intergenic | 35.0% | |
ATCAAATAAGGAAGAGGTGA+AGG | - | Chr7:55399255-55399274 | MsG0780038923.01.T01:CDS | 35.0% | |
ATTTCTTGAGAATGAGCTCA+AGG | - | Chr7:55400258-55400277 | MsG0780038923.01.T01:CDS | 35.0% | |
GGAAAGTCCATTTGTAACAA+GGG | - | Chr7:55399291-55399310 | MsG0780038923.01.T01:CDS | 35.0% | |
GTCCAATTTCATAGATGACA+AGG | - | Chr7:55399549-55399568 | MsG0780038923.01.T01:CDS | 35.0% | |
TAAGGATCATTAGGCAAGAT+AGG | + | Chr7:55399505-55399524 | None:intergenic | 35.0% | |
TCAAGGACAAATTCTTTGGT+GGG | - | Chr7:55400275-55400294 | MsG0780038923.01.T01:CDS | 35.0% | |
TGATCCTTATAAAAGAGCCT+TGG | - | Chr7:55399516-55399535 | MsG0780038923.01.T01:CDS | 35.0% | |
TGGAAAGTCCATTTGTAACA+AGG | - | Chr7:55399290-55399309 | MsG0780038923.01.T01:CDS | 35.0% | |
!! | AAGCTTTGGAAATTCTTCAC+TGG | + | Chr7:55400389-55400408 | None:intergenic | 35.0% |
!! | GAGTATTGAGGAAACAAAAG+AGG | - | Chr7:55400228-55400247 | MsG0780038923.01.T01:CDS | 35.0% |
!! | GGAGATTGCTCTAAAATTGA+AGG | - | Chr7:55399315-55399334 | MsG0780038923.01.T01:CDS | 35.0% |
!! | TAGCTTTATAGAAGGCCAAA+AGG | + | Chr7:55400477-55400496 | None:intergenic | 35.0% |
AAGTCCATTTGTAACAAGGG+TGG | - | Chr7:55399294-55399313 | MsG0780038923.01.T01:CDS | 40.0% | |
ATCACAAGTGACTCTGCTAT+AGG | + | Chr7:55399448-55399467 | None:intergenic | 40.0% | |
ATCTCCACCCTTGTTACAAA+TGG | + | Chr7:55399301-55399320 | None:intergenic | 40.0% | |
CAAGGACAAATTCTTTGGTG+GGG | - | Chr7:55400276-55400295 | MsG0780038923.01.T01:CDS | 40.0% | |
CCAAGTGCTTCTTGTATAAC+AGG | + | Chr7:55400352-55400371 | None:intergenic | 40.0% | |
CTCAAGGACAAATTCTTTGG+TGG | - | Chr7:55400274-55400293 | MsG0780038923.01.T01:CDS | 40.0% | |
GAGCTCAAGGACAAATTCTT+TGG | - | Chr7:55400271-55400290 | MsG0780038923.01.T01:CDS | 40.0% | |
TGGCTCCAATTGTAAAGCTT+TGG | + | Chr7:55400403-55400422 | None:intergenic | 40.0% | |
TTGTTGACAACATGGGTCTA+AGG | + | Chr7:55399719-55399738 | None:intergenic | 40.0% | |
! | AAGGAAGAGGTGAAGGTTTT+TGG | - | Chr7:55399262-55399281 | MsG0780038923.01.T01:CDS | 40.0% |
!! | AGAACGTGAGAAGAGTATTG+AGG | - | Chr7:55400216-55400235 | MsG0780038923.01.T01:CDS | 40.0% |
!! | AGAGGTGAAGGTTTTTGGAT+TGG | - | Chr7:55399267-55399286 | MsG0780038923.01.T01:CDS | 40.0% |
!! | AGCACTGGTCTCACAAATTA+AGG | + | Chr7:55400156-55400175 | None:intergenic | 40.0% |
!! | CCTGTTATACAAGAAGCACT+TGG | - | Chr7:55400349-55400368 | MsG0780038923.01.T01:CDS | 40.0% |
AAGGCCAAAAGGATCTCTCT+AGG | + | Chr7:55400466-55400485 | None:intergenic | 45.0% | |
ACAAGCTTTCCGTACACCAT+TGG | + | Chr7:55400179-55400198 | None:intergenic | 45.0% | |
GAACTTGGACTTGAGCTACA+TGG | + | Chr7:55399601-55399620 | None:intergenic | 45.0% | |
TAATTCGAACTTCGGCCGAA+AGG | - | Chr7:55399824-55399843 | MsG0780038923.01.T01:intron | 45.0% | |
TTCTTTGGTGGGGAGGATAT+TGG | - | Chr7:55400286-55400305 | MsG0780038923.01.T01:CDS | 45.0% | |
! | CGTGCCAAGGCTCTTTTATA+AGG | + | Chr7:55399523-55399542 | None:intergenic | 45.0% |
! | CTGCCGTACTCATAGCTTTT+TGG | - | Chr7:55400323-55400342 | MsG0780038923.01.T01:CDS | 45.0% |
!! | GGTGAAGGTTTTTGGATTGG+TGG | - | Chr7:55399270-55399289 | MsG0780038923.01.T01:CDS | 45.0% |
!! | AAAAATAATAATAATAAAGT+TGG | + | Chr7:55399630-55399649 | None:intergenic | 5.0% |
!!! | ATTAACAAAATAATTTTTTT+GGG | - | Chr7:55399756-55399775 | MsG0780038923.01.T01:intron | 5.0% |
AAAGAGCCTTGGCACGTTTC+TGG | - | Chr7:55399527-55399546 | MsG0780038923.01.T01:CDS | 50.0% | |
ACCAGTGCTCCAATGGTGTA+CGG | - | Chr7:55400167-55400186 | MsG0780038923.01.T01:intron | 50.0% | |
ATTGGACCAGAAACGTGCCA+AGG | + | Chr7:55399536-55399555 | None:intergenic | 50.0% | |
GCCAAAAGGATCTCTCTAGG+AGG | + | Chr7:55400463-55400482 | None:intergenic | 50.0% | |
GGACAAATTCTTTGGTGGGG+AGG | - | Chr7:55400279-55400298 | MsG0780038923.01.T01:CDS | 50.0% | |
TTGTGAGACCAGTGCTCCAA+TGG | - | Chr7:55400160-55400179 | MsG0780038923.01.T01:intron | 50.0% | |
! | GCCTCCTAGAGAGATCCTTT+TGG | - | Chr7:55400459-55400478 | MsG0780038923.01.T01:CDS | 50.0% |
TCCGTACACCATTGGAGCAC+TGG | + | Chr7:55400171-55400190 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 55399250 | 55400531 | 55399250 | ID=MsG0780038923.01;Name=MsG0780038923.01 |
Chr7 | mRNA | 55399250 | 55400531 | 55399250 | ID=MsG0780038923.01.T01;Parent=MsG0780038923.01;Name=MsG0780038923.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|226 |
Chr7 | exon | 55400211 | 55400531 | 55400211 | ID=MsG0780038923.01.T01:exon:15448;Parent=MsG0780038923.01.T01 |
Chr7 | exon | 55399250 | 55399609 | 55399250 | ID=MsG0780038923.01.T01:exon:15447;Parent=MsG0780038923.01.T01 |
Chr7 | CDS | 55400211 | 55400531 | 55400211 | ID=MsG0780038923.01.T01:cds;Parent=MsG0780038923.01.T01 |
Chr7 | CDS | 55399250 | 55399609 | 55399250 | ID=MsG0780038923.01.T01:cds;Parent=MsG0780038923.01.T01 |
Gene Sequence |
Protein sequence |