Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038930.01.T01 | XP_003623196.1 | 94.643 | 224 | 12 | 0 | 1 | 224 | 1 | 224 | 8.03E-155 | 438 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038930.01.T01 | P32110 | 71.556 | 225 | 63 | 1 | 1 | 224 | 1 | 225 | 8.73E-116 | 332 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038930.01.T01 | G7L6H0 | 94.643 | 224 | 12 | 0 | 1 | 224 | 1 | 224 | 3.83e-155 | 438 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048177.01 | MsG0780038930.01 | 0.821982 | 3.021562e-53 | 2.496283e-50 |
| MsG0080048203.01 | MsG0780038930.01 | 0.836304 | 1.011971e-56 | 1.270404e-53 |
| MsG0080048204.01 | MsG0780038930.01 | 0.821267 | 4.422420e-53 | 3.580527e-50 |
| MsG0080048205.01 | MsG0780038930.01 | 0.852573 | 4.225866e-61 | 8.867646e-58 |
| MsG0080048206.01 | MsG0780038930.01 | 0.841614 | 4.270893e-58 | 6.310370e-55 |
| MsG0080048207.01 | MsG0780038930.01 | 0.842136 | 3.108767e-58 | 4.669005e-55 |
| MsG0080048208.01 | MsG0780038930.01 | 0.828194 | 1.029182e-54 | 1.015773e-51 |
| MsG0180000222.01 | MsG0780038930.01 | 0.801671 | 8.065263e-49 | 3.874380e-46 |
| MsG0180000673.01 | MsG0780038930.01 | 0.833481 | 5.202453e-56 | 5.998879e-53 |
| MsG0180001043.01 | MsG0780038930.01 | 0.810270 | 1.253090e-50 | 7.519995e-48 |
| MsG0180001355.01 | MsG0780038930.01 | 0.804965 | 1.676884e-49 | 8.764790e-47 |
| MsG0180001453.01 | MsG0780038930.01 | 0.803315 | 3.697101e-49 | 1.851942e-46 |
| MsG0180001921.01 | MsG0780038930.01 | 0.819462 | 1.147023e-52 | 8.832885e-50 |
| MsG0180001922.01 | MsG0780038930.01 | 0.821094 | 4.846602e-53 | 3.905627e-50 |
| MsG0180003252.01 | MsG0780038930.01 | 0.803760 | 2.989569e-49 | 1.514824e-46 |
| MsG0180004947.01 | MsG0780038930.01 | 0.823707 | 1.197985e-53 | 1.039566e-50 |
| MsG0180006016.01 | MsG0780038930.01 | 0.803948 | 2.732479e-49 | 1.391322e-46 |
| MsG0180006047.01 | MsG0780038930.01 | 0.813004 | 3.187048e-51 | 2.056903e-48 |
| MsG0380013436.01 | MsG0780038930.01 | 0.805114 | 1.560856e-49 | 8.189189e-47 |
| MsG0380014561.01 | MsG0780038930.01 | 0.804227 | 2.389723e-49 | 1.225441e-46 |
| MsG0680030720.01 | MsG0780038930.01 | 0.810153 | 1.327934e-50 | 7.944947e-48 |
| MsG0680031459.01 | MsG0780038930.01 | 0.822208 | 2.678613e-53 | 2.227315e-50 |
| MsG0680031802.01 | MsG0780038930.01 | 0.830743 | 2.472862e-55 | 2.628865e-52 |
| MsG0680035460.01 | MsG0780038930.01 | 0.808197 | 3.486629e-50 | 1.981041e-47 |
| MsG0680035582.01 | MsG0780038930.01 | 0.822588 | 2.186388e-53 | 1.838009e-50 |
| MsG0480018904.01 | MsG0780038930.01 | 0.815129 | 1.083037e-51 | 7.403604e-49 |
| MsG0480020445.01 | MsG0780038930.01 | 0.813194 | 2.895637e-51 | 1.878390e-48 |
| MsG0480020487.01 | MsG0780038930.01 | 0.816310 | 5.908425e-52 | 4.172221e-49 |
| MsG0480023517.01 | MsG0780038930.01 | 0.817909 | 2.582640e-52 | 1.905178e-49 |
| MsG0480023923.01 | MsG0780038930.01 | 0.811561 | 6.583200e-51 | 4.088276e-48 |
| MsG0580026068.01 | MsG0780038930.01 | 0.801969 | 7.007301e-49 | 3.391554e-46 |
| MsG0380015149.01 | MsG0780038930.01 | 0.822662 | 2.100609e-53 | 1.769523e-50 |
| MsG0380015324.01 | MsG0780038930.01 | 0.808257 | 3.384543e-50 | 1.926134e-47 |
| MsG0380015931.01 | MsG0780038930.01 | 0.846695 | 1.848418e-59 | 3.208261e-56 |
| MsG0380015986.01 | MsG0780038930.01 | 0.801214 | 1.000863e-48 | 4.752810e-46 |
| MsG0380017286.01 | MsG0780038930.01 | 0.864229 | 1.412948e-64 | 4.404181e-61 |
| MsG0580026596.01 | MsG0780038930.01 | 0.819479 | 1.136443e-52 | 8.755706e-50 |
| MsG0580027034.01 | MsG0780038930.01 | 0.852608 | 4.130092e-61 | 8.677225e-58 |
| MsG0580027073.01 | MsG0780038930.01 | 0.800117 | 1.675306e-48 | 7.737250e-46 |
| MsG0580027360.01 | MsG0780038930.01 | 0.811058 | 8.463705e-51 | 5.187012e-48 |
| MsG0580028416.01 | MsG0780038930.01 | 0.854109 | 1.531995e-61 | 3.385162e-58 |
| MsG0580029691.01 | MsG0780038930.01 | 0.807929 | 3.975569e-50 | 2.242729e-47 |
| MsG0580029758.01 | MsG0780038930.01 | 0.878986 | 1.801096e-69 | 9.599796e-66 |
| MsG0680030303.01 | MsG0780038930.01 | 0.804309 | 2.297781e-49 | 1.180814e-46 |
| MsG0280007272.01 | MsG0780038930.01 | 0.851829 | 6.876266e-61 | 1.409304e-57 |
| MsG0280007369.01 | MsG0780038930.01 | 0.802142 | 6.456378e-49 | 3.138810e-46 |
| MsG0280007391.01 | MsG0780038930.01 | 0.808758 | 2.646593e-50 | 1.525902e-47 |
| MsG0280007549.01 | MsG0780038930.01 | 0.803776 | 2.965993e-49 | 1.503483e-46 |
| MsG0280007714.01 | MsG0780038930.01 | 0.845160 | 4.829487e-59 | 7.976451e-56 |
| MsG0280008073.01 | MsG0780038930.01 | 0.812935 | 3.300535e-51 | 2.126100e-48 |
| MsG0280009235.01 | MsG0780038930.01 | 0.807911 | 4.011481e-50 | 2.261884e-47 |
| MsG0280010416.01 | MsG0780038930.01 | 0.815891 | 7.328534e-52 | 5.115405e-49 |
| MsG0780036210.01 | MsG0780038930.01 | 0.805717 | 1.166662e-49 | 6.217051e-47 |
| MsG0780036854.01 | MsG0780038930.01 | 0.820740 | 5.846942e-53 | 4.665094e-50 |
| MsG0780038444.01 | MsG0780038930.01 | 0.826033 | 3.387489e-54 | 3.140403e-51 |
| MsG0780038921.01 | MsG0780038930.01 | 0.805195 | 1.500790e-49 | 7.890590e-47 |
| MsG0780038930.01 | MsG0780039875.01 | 0.808072 | 3.706558e-50 | 2.098959e-47 |
| MsG0780038930.01 | MsG0780040679.01 | 0.837480 | 5.069392e-57 | 6.593932e-54 |
| MsG0780038930.01 | MsG0780040758.01 | 0.816605 | 5.072506e-52 | 3.610849e-49 |
| MsG0780038930.01 | MsG0880042049.01 | 0.823055 | 1.701470e-53 | 1.449383e-50 |
| MsG0780038930.01 | MsG0880042319.01 | 0.806898 | 6.576665e-50 | 3.612049e-47 |
| MsG0780038930.01 | MsG0880042843.01 | 0.823411 | 1.405541e-53 | 1.209163e-50 |
| MsG0780038930.01 | MsG0880042965.01 | 0.819487 | 1.131785e-52 | 8.721716e-50 |
| MsG0780038930.01 | MsG0880043287.01 | 0.810781 | 9.716124e-51 | 5.910847e-48 |
| MsG0780038930.01 | MsG0880045106.01 | 0.835297 | 1.821402e-56 | 2.218224e-53 |
| MsG0780038930.01 | MsG0880046058.01 | 0.810600 | 1.063367e-50 | 6.437585e-48 |
| MsG0780038930.01 | MsG0880046244.01 | 0.813473 | 2.514454e-51 | 1.643662e-48 |
| MsG0780038930.01 | MsG0880046329.01 | 0.816655 | 4.945450e-52 | 3.525195e-49 |
| MsG0780038930.01 | MsG0880047019.01 | 0.813389 | 2.624257e-51 | 1.711526e-48 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038930.01.T01 | MTR_7g065600 | 94.643 | 224 | 12 | 0 | 1 | 224 | 1 | 224 | 9.72e-159 | 438 |
| MsG0780038930.01.T01 | MTR_7g065590 | 79.911 | 224 | 45 | 0 | 1 | 224 | 1 | 224 | 2.80e-135 | 379 |
| MsG0780038930.01.T01 | MTR_7g065290 | 77.232 | 224 | 51 | 0 | 1 | 224 | 1 | 224 | 4.83e-130 | 365 |
| MsG0780038930.01.T01 | MTR_7g065265 | 74.107 | 224 | 58 | 0 | 1 | 224 | 1 | 224 | 1.07e-123 | 350 |
| MsG0780038930.01.T01 | MTR_7g065230 | 75.893 | 224 | 49 | 1 | 1 | 224 | 1 | 219 | 2.30e-123 | 348 |
| MsG0780038930.01.T01 | MTR_7g065270 | 72.768 | 224 | 61 | 0 | 1 | 224 | 1 | 224 | 2.03e-121 | 344 |
| MsG0780038930.01.T01 | MTR_7g065260 | 76.444 | 225 | 52 | 1 | 1 | 224 | 8 | 232 | 3.11e-116 | 331 |
| MsG0780038930.01.T01 | MTR_7g065720 | 69.333 | 225 | 68 | 1 | 1 | 224 | 1 | 225 | 1.13e-114 | 327 |
| MsG0780038930.01.T01 | MTR_7g065660 | 67.713 | 223 | 72 | 0 | 1 | 223 | 1 | 223 | 4.71e-113 | 323 |
| MsG0780038930.01.T01 | MTR_7g065740 | 62.946 | 224 | 82 | 1 | 1 | 223 | 1 | 224 | 3.61e-107 | 308 |
| MsG0780038930.01.T01 | MTR_7g065630 | 66.816 | 223 | 70 | 1 | 1 | 223 | 19 | 237 | 4.34e-107 | 308 |
| MsG0780038930.01.T01 | MTR_7g065750 | 63.839 | 224 | 80 | 1 | 1 | 223 | 1 | 224 | 3.03e-104 | 300 |
| MsG0780038930.01.T01 | MTR_4g019790 | 60.987 | 223 | 87 | 0 | 1 | 223 | 1 | 223 | 8.80e-103 | 296 |
| MsG0780038930.01.T01 | MTR_7g065640 | 61.883 | 223 | 67 | 1 | 1 | 223 | 1 | 205 | 4.48e-99 | 286 |
| MsG0780038930.01.T01 | MTR_7g065710 | 64.734 | 207 | 69 | 1 | 8 | 214 | 5 | 207 | 5.86e-96 | 279 |
| MsG0780038930.01.T01 | MTR_4g019780 | 62.150 | 214 | 79 | 2 | 3 | 215 | 4 | 216 | 1.30e-93 | 273 |
| MsG0780038930.01.T01 | MTR_7g065680 | 65.766 | 222 | 72 | 1 | 1 | 222 | 1 | 218 | 8.07e-93 | 271 |
| MsG0780038930.01.T01 | MTR_7g065700 | 64.019 | 214 | 73 | 1 | 1 | 214 | 1 | 210 | 1.33e-87 | 258 |
| MsG0780038930.01.T01 | MTR_1g090150 | 44.796 | 221 | 117 | 2 | 5 | 222 | 1 | 219 | 5.75e-65 | 201 |
| MsG0780038930.01.T01 | MTR_6g080440 | 47.826 | 207 | 106 | 2 | 8 | 213 | 4 | 209 | 1.19e-63 | 197 |
| MsG0780038930.01.T01 | MTR_8g087425 | 46.789 | 218 | 114 | 2 | 4 | 220 | 2 | 218 | 1.70e-63 | 197 |
| MsG0780038930.01.T01 | MTR_3g099757 | 48.636 | 220 | 111 | 2 | 5 | 223 | 3 | 221 | 2.86e-62 | 194 |
| MsG0780038930.01.T01 | MTR_8g087410 | 45.161 | 217 | 116 | 3 | 1 | 216 | 1 | 215 | 3.29e-58 | 184 |
| MsG0780038930.01.T01 | MTR_1g115195 | 45.070 | 213 | 114 | 2 | 7 | 216 | 3 | 215 | 4.49e-58 | 183 |
| MsG0780038930.01.T01 | MTR_5g040430 | 41.892 | 222 | 121 | 3 | 1 | 215 | 1 | 221 | 1.36e-57 | 182 |
| MsG0780038930.01.T01 | MTR_1g090070 | 42.793 | 222 | 118 | 4 | 8 | 223 | 10 | 228 | 1.02e-56 | 180 |
| MsG0780038930.01.T01 | MTR_1g090100 | 42.986 | 221 | 120 | 4 | 7 | 223 | 2 | 220 | 9.62e-55 | 174 |
| MsG0780038930.01.T01 | MTR_1g090060 | 42.081 | 221 | 122 | 4 | 8 | 224 | 4 | 222 | 7.65e-54 | 172 |
| MsG0780038930.01.T01 | MTR_5g037380 | 43.182 | 220 | 115 | 3 | 1 | 212 | 1 | 218 | 9.22e-54 | 172 |
| MsG0780038930.01.T01 | MTR_4g059730 | 39.906 | 213 | 124 | 2 | 6 | 215 | 3 | 214 | 8.74e-52 | 167 |
| MsG0780038930.01.T01 | MTR_8g061950 | 42.922 | 219 | 117 | 3 | 5 | 215 | 3 | 221 | 3.77e-51 | 166 |
| MsG0780038930.01.T01 | MTR_1g090090 | 41.627 | 209 | 116 | 4 | 8 | 212 | 4 | 210 | 1.48e-50 | 164 |
| MsG0780038930.01.T01 | MTR_2g070200 | 40.196 | 204 | 118 | 3 | 6 | 207 | 3 | 204 | 1.07e-43 | 146 |
| MsG0780038930.01.T01 | MTR_2g070150 | 38.235 | 204 | 121 | 4 | 6 | 207 | 3 | 203 | 4.07e-42 | 142 |
| MsG0780038930.01.T01 | MTR_3g467420 | 42.000 | 200 | 111 | 4 | 7 | 204 | 9 | 205 | 4.34e-42 | 142 |
| MsG0780038930.01.T01 | MTR_2g070130 | 37.864 | 206 | 123 | 4 | 6 | 209 | 3 | 205 | 6.95e-41 | 139 |
| MsG0780038930.01.T01 | MTR_2g070180 | 37.745 | 204 | 122 | 4 | 6 | 207 | 3 | 203 | 1.30e-40 | 138 |
| MsG0780038930.01.T01 | MTR_2g070140 | 37.629 | 194 | 116 | 4 | 21 | 212 | 2 | 192 | 5.98e-40 | 136 |
| MsG0780038930.01.T01 | MTR_4g124130 | 43.229 | 192 | 99 | 6 | 5 | 191 | 2 | 188 | 1.31e-39 | 136 |
| MsG0780038930.01.T01 | MTR_3g467430 | 39.901 | 203 | 117 | 4 | 4 | 204 | 6 | 205 | 1.51e-38 | 133 |
| MsG0780038930.01.T01 | MTR_8g056940 | 42.458 | 179 | 98 | 4 | 16 | 192 | 13 | 188 | 3.32e-38 | 132 |
| MsG0780038930.01.T01 | MTR_5g076900 | 38.164 | 207 | 123 | 4 | 3 | 207 | 2 | 205 | 3.78e-38 | 132 |
| MsG0780038930.01.T01 | MTR_2g070210 | 37.915 | 211 | 124 | 5 | 6 | 212 | 3 | 210 | 4.07e-38 | 132 |
| MsG0780038930.01.T01 | MTR_2g070120 | 37.864 | 206 | 123 | 4 | 6 | 209 | 3 | 205 | 1.14e-37 | 131 |
| MsG0780038930.01.T01 | MTR_2g070070 | 38.693 | 199 | 117 | 4 | 8 | 204 | 5 | 200 | 9.24e-36 | 126 |
| MsG0780038930.01.T01 | MTR_2g070060 | 36.634 | 202 | 123 | 4 | 8 | 207 | 5 | 203 | 3.89e-35 | 124 |
| MsG0780038930.01.T01 | MTR_2g070110 | 37.186 | 199 | 119 | 4 | 16 | 212 | 13 | 207 | 1.76e-30 | 112 |
| MsG0780038930.01.T01 | MTR_0186s0030 | 45.385 | 130 | 69 | 2 | 16 | 144 | 13 | 141 | 3.28e-30 | 109 |
| MsG0780038930.01.T01 | MTR_2g072120 | 44.615 | 65 | 35 | 1 | 51 | 114 | 2 | 66 | 3.78e-15 | 68.2 |
| MsG0780038930.01.T01 | MTR_4g134370 | 28.571 | 210 | 126 | 8 | 10 | 204 | 18 | 218 | 5.52e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038930.01.T01 | AT3G09270 | 50.893 | 224 | 106 | 4 | 3 | 223 | 2 | 224 | 3.18e-76 | 229 |
| MsG0780038930.01.T01 | AT2G29420 | 48.402 | 219 | 111 | 2 | 3 | 220 | 5 | 222 | 4.08e-72 | 219 |
| MsG0780038930.01.T01 | AT2G29490 | 47.847 | 209 | 106 | 3 | 1 | 207 | 1 | 208 | 4.36e-60 | 188 |
| MsG0780038930.01.T01 | AT2G29450 | 43.498 | 223 | 124 | 2 | 3 | 223 | 2 | 224 | 1.03e-56 | 180 |
| MsG0780038930.01.T01 | AT2G29460 | 43.694 | 222 | 122 | 3 | 1 | 220 | 1 | 221 | 2.16e-55 | 176 |
| MsG0780038930.01.T01 | AT2G29480 | 44.498 | 209 | 113 | 3 | 1 | 207 | 1 | 208 | 3.05e-54 | 173 |
| MsG0780038930.01.T01 | AT1G10370 | 43.439 | 221 | 116 | 3 | 1 | 214 | 1 | 219 | 5.80e-53 | 170 |
| MsG0780038930.01.T01 | AT2G29440 | 41.778 | 225 | 127 | 4 | 1 | 223 | 1 | 223 | 1.52e-52 | 169 |
| MsG0780038930.01.T01 | AT2G29470 | 43.810 | 210 | 114 | 4 | 1 | 207 | 1 | 209 | 1.80e-52 | 169 |
| MsG0780038930.01.T01 | AT1G69930 | 38.839 | 224 | 131 | 2 | 2 | 219 | 7 | 230 | 1.25e-51 | 167 |
| MsG0780038930.01.T01 | AT1G10360 | 41.262 | 206 | 114 | 2 | 6 | 204 | 4 | 209 | 4.55e-50 | 163 |
| MsG0780038930.01.T01 | AT1G27130 | 40.000 | 225 | 126 | 4 | 1 | 217 | 1 | 224 | 5.44e-49 | 160 |
| MsG0780038930.01.T01 | AT1G59700 | 44.037 | 218 | 114 | 3 | 5 | 214 | 4 | 221 | 7.99e-49 | 160 |
| MsG0780038930.01.T01 | AT1G59670 | 43.269 | 208 | 110 | 3 | 5 | 204 | 4 | 211 | 1.28e-48 | 159 |
| MsG0780038930.01.T01 | AT5G62480 | 39.367 | 221 | 123 | 4 | 5 | 215 | 6 | 225 | 8.48e-46 | 152 |
| MsG0780038930.01.T01 | AT1G27140 | 38.767 | 227 | 129 | 4 | 1 | 218 | 1 | 226 | 1.10e-44 | 149 |
| MsG0780038930.01.T01 | AT1G17170 | 40.826 | 218 | 121 | 5 | 6 | 220 | 3 | 215 | 6.94e-44 | 147 |
| MsG0780038930.01.T01 | AT1G78320 | 40.865 | 208 | 118 | 4 | 5 | 210 | 2 | 206 | 7.66e-44 | 147 |
| MsG0780038930.01.T01 | AT1G78370 | 41.206 | 199 | 112 | 4 | 16 | 212 | 13 | 208 | 1.88e-43 | 145 |
| MsG0780038930.01.T01 | AT1G78380 | 41.063 | 207 | 117 | 4 | 8 | 212 | 5 | 208 | 3.27e-43 | 145 |
| MsG0780038930.01.T01 | AT1G69920 | 37.445 | 227 | 132 | 4 | 1 | 217 | 26 | 252 | 1.89e-42 | 144 |
| MsG0780038930.01.T01 | AT1G78340 | 41.148 | 209 | 118 | 4 | 6 | 212 | 3 | 208 | 2.53e-42 | 143 |
| MsG0780038930.01.T01 | AT1G74590 | 34.361 | 227 | 142 | 3 | 1 | 221 | 1 | 226 | 2.66e-42 | 143 |
| MsG0780038930.01.T01 | AT1G53680 | 38.571 | 210 | 124 | 4 | 1 | 207 | 1 | 208 | 1.98e-40 | 138 |
| MsG0780038930.01.T01 | AT1G17180 | 37.799 | 209 | 125 | 4 | 6 | 212 | 3 | 208 | 2.78e-39 | 135 |
| MsG0780038930.01.T01 | AT1G78360 | 39.904 | 208 | 119 | 5 | 8 | 212 | 5 | 209 | 2.48e-38 | 132 |
| MsG0780038930.01.T01 | AT1G17190 | 38.785 | 214 | 124 | 5 | 1 | 212 | 1 | 209 | 5.04e-38 | 132 |
| MsG0780038930.01.T01 | AT3G43800 | 35.749 | 207 | 124 | 6 | 4 | 204 | 2 | 205 | 2.66e-35 | 125 |
| MsG0780038930.01.T01 | AT5G62480 | 31.364 | 220 | 116 | 4 | 5 | 215 | 6 | 199 | 3.78e-28 | 106 |
| MsG0780038930.01.T01 | AT5G62480 | 31.364 | 220 | 115 | 4 | 5 | 215 | 6 | 198 | 7.69e-28 | 105 |
| MsG0780038930.01.T01 | AT1G78320 | 33.816 | 207 | 107 | 4 | 5 | 210 | 2 | 179 | 2.82e-27 | 103 |
| MsG0780038930.01.T01 | AT2G02380 | 29.302 | 215 | 133 | 6 | 5 | 207 | 9 | 216 | 3.64e-17 | 77.4 |
| MsG0780038930.01.T01 | AT2G02390 | 29.817 | 218 | 132 | 7 | 3 | 207 | 4 | 213 | 1.21e-16 | 76.3 |
| MsG0780038930.01.T01 | AT2G02390 | 28.889 | 225 | 132 | 8 | 3 | 207 | 4 | 220 | 2.70e-14 | 69.7 |
| MsG0780038930.01.T01 | AT2G02390 | 41.237 | 97 | 53 | 2 | 3 | 96 | 4 | 99 | 8.94e-14 | 67.8 |
Find 48 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGCCTTGGCTCGTTTC+TGG | 0.120947 | 7:-55497617 | MsG0780038930.01.T01:CDS |
| CAGGAAAATGTGAAGCTTTA+TGG | 0.125337 | 7:-55497882 | MsG0780038930.01.T01:CDS |
| GAGCTTAAGGATAATTTCTT+TGG | 0.282538 | 7:-55496571 | MsG0780038930.01.T01:CDS |
| TAAGGATCAGAAGGCAATAT+TGG | 0.299422 | 7:+55497642 | None:intergenic |
| ACAGGAACCTTCTTGTAAAC+AGG | 0.304362 | 7:+55497741 | None:intergenic |
| GCCTCCTAGAGAAGGACTTT+TGG | 0.337294 | 7:-55496383 | MsG0780038930.01.T01:CDS |
| AATTCTTGAGAATGAGCTTA+AGG | 0.354197 | 7:-55496584 | MsG0780038930.01.T01:CDS |
| TTCTTTGGTGGAGAGGAGAT+TGG | 0.368042 | 7:-55496556 | MsG0780038930.01.T01:CDS |
| GGCAATTTATCCTTAACAAC+TGG | 0.375316 | 7:+55496403 | None:intergenic |
| TTGACTCCATTTGTAAAGCT+TGG | 0.384299 | 7:+55496441 | None:intergenic |
| CACCAACCATCCAGTTGTTA+AGG | 0.388600 | 7:-55496413 | MsG0780038930.01.T01:CDS |
| TGACTCCATTTGTAAAGCTT+GGG | 0.390868 | 7:+55496442 | None:intergenic |
| CACTAAGATGGCATCAAATC+AGG | 0.391111 | 7:-55497901 | None:intergenic |
| TTTGTTGCTTCTTGTACAAT+GGG | 0.408906 | 7:+55496493 | None:intergenic |
| TACAAATATGAGTTAGAAAA+GGG | 0.419037 | 7:-55497798 | MsG0780038930.01.T01:CDS |
| GTTTGTTGCTTCTTGTACAA+TGG | 0.430175 | 7:+55496492 | None:intergenic |
| ATCACAAGGGATTCTGATAT+AGG | 0.433145 | 7:+55497699 | None:intergenic |
| GACCAAGTTCATAGATGATA+AGG | 0.434027 | 7:-55497595 | MsG0780038930.01.T01:intron |
| ATCTCCACCCTGCTCACAAA+TGG | 0.436953 | 7:+55497846 | None:intergenic |
| ATACAAATATGAGTTAGAAA+AGG | 0.446746 | 7:-55497799 | MsG0780038930.01.T01:CDS |
| CTTAAGGATAATTTCTTTGG+TGG | 0.454634 | 7:-55496568 | MsG0780038930.01.T01:CDS |
| GGAGATTGCTCTAACATTGA+AGG | 0.460355 | 7:-55497829 | MsG0780038930.01.T01:CDS |
| AATTTCCCAAGCTTTACAAA+TGG | 0.474830 | 7:-55496447 | MsG0780038930.01.T01:CDS |
| TACCTTATCATCTATGAACT+TGG | 0.479710 | 7:+55497593 | None:intergenic |
| ATCCTTAACAACTGGATGGT+TGG | 0.488666 | 7:+55496411 | None:intergenic |
| TTATCATTATGAACTAATAC+AGG | 0.517988 | 7:+55497723 | None:intergenic |
| GGATAATTTCTTTGGTGGAG+AGG | 0.526031 | 7:-55496563 | MsG0780038930.01.T01:CDS |
| TGTGAAGCTTTATGGAATGA+TGG | 0.547157 | 7:-55497874 | MsG0780038930.01.T01:CDS |
| GATAAATTGCCTCCTAGAGA+AGG | 0.547220 | 7:-55496391 | MsG0780038930.01.T01:CDS |
| TGATCCTTACAAAAGAGCCT+TGG | 0.548089 | 7:-55497628 | MsG0780038930.01.T01:CDS |
| TGGCAAGTCCATTTGTGAGC+AGG | 0.549506 | 7:-55497854 | MsG0780038930.01.T01:CDS |
| TTGAGTATGTCGATGAGACC+TGG | 0.549849 | 7:-55497674 | MsG0780038930.01.T01:CDS |
| TAAGCCAAAAGTCCTTCTCT+AGG | 0.550201 | 7:+55496379 | None:intergenic |
| CAGGAACCTTCTTGTAAACA+GGG | 0.551890 | 7:+55497742 | None:intergenic |
| AGAACGTGAGAAAGCTATTG+AGG | 0.557970 | 7:-55496626 | MsG0780038930.01.T01:CDS |
| ATTTATCCTTAACAACTGGA+TGG | 0.561475 | 7:+55496407 | None:intergenic |
| AATATGAGTTAGAAAAGGGA+GGG | 0.564400 | 7:-55497794 | MsG0780038930.01.T01:CDS |
| ATACAACCCTGTTTACAAGA+AGG | 0.566628 | 7:-55497748 | MsG0780038930.01.T01:CDS |
| GGCAAGTCCATTTGTGAGCA+GGG | 0.574715 | 7:-55497853 | MsG0780038930.01.T01:CDS |
| AAATATGAGTTAGAAAAGGG+AGG | 0.578650 | 7:-55497795 | MsG0780038930.01.T01:CDS |
| GAGATTGCTCTAACATTGAA+GGG | 0.597295 | 7:-55497828 | MsG0780038930.01.T01:CDS |
| CGACATACTCAAGAATCACA+AGG | 0.607291 | 7:+55497685 | None:intergenic |
| GCCAAAAGTCCTTCTCTAGG+AGG | 0.619286 | 7:+55496382 | None:intergenic |
| ACCAGTGTTTAAGTGCTGCA+CGG | 0.628510 | 7:-55496675 | MsG0780038930.01.T01:intron |
| CTTGGTCCAGAAACGAGCCA+AGG | 0.682377 | 7:+55497611 | None:intergenic |
| TTGTTGCTTCTTGTACAATG+GGG | 0.684989 | 7:+55496494 | None:intergenic |
| GACATACTCAAGAATCACAA+GGG | 0.702786 | 7:+55497686 | None:intergenic |
| AAGTCCATTTGTGAGCAGGG+TGG | 0.747804 | 7:-55497850 | MsG0780038930.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTTTTCTTTTTAAAATTA+CGG | + | Chr7:55497193-55497212 | None:intergenic | 10.0% |
| !!! | TAGTTTTCATTTTTAAATTA+CGG | - | Chr7:55497064-55497083 | MsG0780038930.01.T01:intron | 10.0% |
| !! | AATAAATATGATATTTGAAG+CGG | + | Chr7:55497297-55497316 | None:intergenic | 15.0% |
| !! | AATATTTAAGAAGAATAATC+TGG | - | Chr7:55497424-55497443 | MsG0780038930.01.T01:intron | 15.0% |
| !! | ATACAAATATGAGTTAGAAA+AGG | - | Chr7:55496434-55496453 | MsG0780038930.01.T01:CDS | 20.0% |
| !! | TACAAATATGAGTTAGAAAA+GGG | - | Chr7:55496435-55496454 | MsG0780038930.01.T01:CDS | 20.0% |
| !! | TTATCATTATGAACTAATAC+AGG | + | Chr7:55496513-55496532 | None:intergenic | 20.0% |
| !!! | ACACTGGTTTTAAAAAATTA+AGG | + | Chr7:55497546-55497565 | None:intergenic | 20.0% |
| !!! | CACTTTTAAAGTGTATAAAT+GGG | - | Chr7:55496739-55496758 | MsG0780038930.01.T01:intron | 20.0% |
| !!! | TCACTTTTAAAGTGTATAAA+TGG | - | Chr7:55496738-55496757 | MsG0780038930.01.T01:intron | 20.0% |
| ! | ATAGAGAAAAACAATACATG+TGG | - | Chr7:55496951-55496970 | MsG0780038930.01.T01:intron | 25.0% |
| ! | ATGACTATTATATATGCATG+TGG | - | Chr7:55497335-55497354 | MsG0780038930.01.T01:intron | 25.0% |
| ! | TAAAATATTTCACAAGCATG+TGG | - | Chr7:55496873-55496892 | MsG0780038930.01.T01:intron | 25.0% |
| ! | TTATTCAACAAAACGAGTAA+CGG | - | Chr7:55497312-55497331 | MsG0780038930.01.T01:intron | 25.0% |
| !! | TGAAATATAATGACTTGTGA+CGG | + | Chr7:55497384-55497403 | None:intergenic | 25.0% |
| !!! | ATGTATTGTTTTTCTCTATG+CGG | + | Chr7:55496950-55496969 | None:intergenic | 25.0% |
| AAATATGAGTTAGAAAAGGG+AGG | - | Chr7:55496438-55496457 | MsG0780038930.01.T01:CDS | 30.0% | |
| AATATGAGTTAGAAAAGGGA+GGG | - | Chr7:55496439-55496458 | MsG0780038930.01.T01:CDS | 30.0% | |
| AATTCTTGAGAATGAGCTTA+AGG | - | Chr7:55497649-55497668 | MsG0780038930.01.T01:CDS | 30.0% | |
| AATTTCCCAAGCTTTACAAA+TGG | - | Chr7:55497786-55497805 | MsG0780038930.01.T01:CDS | 30.0% | |
| ATTTATCCTTAACAACTGGA+TGG | + | Chr7:55497829-55497848 | None:intergenic | 30.0% | |
| CTTAAGGATAATTTCTTTGG+TGG | - | Chr7:55497665-55497684 | MsG0780038930.01.T01:CDS | 30.0% | |
| GAGCTTAAGGATAATTTCTT+TGG | - | Chr7:55497662-55497681 | MsG0780038930.01.T01:CDS | 30.0% | |
| TACCTTATCATCTATGAACT+TGG | + | Chr7:55496643-55496662 | None:intergenic | 30.0% | |
| TGTATATTATATGCAGGGAT+CGG | + | Chr7:55496783-55496802 | None:intergenic | 30.0% | |
| ! | TTTGTTGCTTCTTGTACAAT+GGG | + | Chr7:55497743-55497762 | None:intergenic | 30.0% |
| !! | CAATATTGGATTTTGTTTCC+AGG | + | Chr7:55496580-55496599 | None:intergenic | 30.0% |
| AAATACCACAAACTTCACTG+AGG | - | Chr7:55496996-55497015 | MsG0780038930.01.T01:intron | 35.0% | |
| AATACCACAAACTTCACTGA+GGG | - | Chr7:55496997-55497016 | MsG0780038930.01.T01:intron | 35.0% | |
| ATACAACCCTGTTTACAAGA+AGG | - | Chr7:55496485-55496504 | MsG0780038930.01.T01:CDS | 35.0% | |
| ATACGCTAGAGAGACATTTA+GGG | + | Chr7:55497260-55497279 | None:intergenic | 35.0% | |
| ATATTTCACAAGCATGTGGA+TGG | - | Chr7:55496877-55496896 | MsG0780038930.01.T01:intron | 35.0% | |
| ATCACAAGGGATTCTGATAT+AGG | + | Chr7:55496537-55496556 | None:intergenic | 35.0% | |
| CAGGAAAATGTGAAGCTTTA+TGG | - | Chr7:55496351-55496370 | MsG0780038930.01.T01:CDS | 35.0% | |
| GAATTACGTTCATGTGTTCT+CGG | + | Chr7:55496824-55496843 | None:intergenic | 35.0% | |
| GACATACTCAAGAATCACAA+GGG | + | Chr7:55496550-55496569 | None:intergenic | 35.0% | |
| GACCAAGTTCATAGATGATA+AGG | - | Chr7:55496638-55496657 | MsG0780038930.01.T01:CDS | 35.0% | |
| GACGCTGTATATTATATGCA+GGG | + | Chr7:55496788-55496807 | None:intergenic | 35.0% | |
| GAGATTGCTCTAACATTGAA+GGG | - | Chr7:55496405-55496424 | MsG0780038930.01.T01:CDS | 35.0% | |
| GGCAATTTATCCTTAACAAC+TGG | + | Chr7:55497833-55497852 | None:intergenic | 35.0% | |
| TAAGGATCAGAAGGCAATAT+TGG | + | Chr7:55496594-55496613 | None:intergenic | 35.0% | |
| TATACGCTAGAGAGACATTT+AGG | + | Chr7:55497261-55497280 | None:intergenic | 35.0% | |
| TGACTCCATTTGTAAAGCTT+GGG | + | Chr7:55497794-55497813 | None:intergenic | 35.0% | |
| TTGACTCCATTTGTAAAGCT+TGG | + | Chr7:55497795-55497814 | None:intergenic | 35.0% | |
| ! | GTTTGTTGCTTCTTGTACAA+TGG | + | Chr7:55497744-55497763 | None:intergenic | 35.0% |
| ! | TGTGAAGCTTTATGGAATGA+TGG | - | Chr7:55496359-55496378 | MsG0780038930.01.T01:CDS | 35.0% |
| ! | TTGTTGCTTCTTGTACAATG+GGG | + | Chr7:55497742-55497761 | None:intergenic | 35.0% |
| !! | TATAATGACTTGTGACGGAT+TGG | + | Chr7:55497379-55497398 | None:intergenic | 35.0% |
| ACAGGAACCTTCTTGTAAAC+AGG | + | Chr7:55496495-55496514 | None:intergenic | 40.0% | |
| AGAACGTGAGAAAGCTATTG+AGG | - | Chr7:55497607-55497626 | MsG0780038930.01.T01:CDS | 40.0% | |
| ATCCTTAACAACTGGATGGT+TGG | + | Chr7:55497825-55497844 | None:intergenic | 40.0% | |
| CAGGAACCTTCTTGTAAACA+GGG | + | Chr7:55496494-55496513 | None:intergenic | 40.0% | |
| CGACATACTCAAGAATCACA+AGG | + | Chr7:55496551-55496570 | None:intergenic | 40.0% | |
| GATAAATTGCCTCCTAGAGA+AGG | - | Chr7:55497842-55497861 | MsG0780038930.01.T01:CDS | 40.0% | |
| GGACGCTGTATATTATATGC+AGG | + | Chr7:55496789-55496808 | None:intergenic | 40.0% | |
| GGAGATTGCTCTAACATTGA+AGG | - | Chr7:55496404-55496423 | MsG0780038930.01.T01:CDS | 40.0% | |
| GGATAATTTCTTTGGTGGAG+AGG | - | Chr7:55497670-55497689 | MsG0780038930.01.T01:CDS | 40.0% | |
| TAAGCCAAAAGTCCTTCTCT+AGG | + | Chr7:55497857-55497876 | None:intergenic | 40.0% | |
| TGATCCTTACAAAAGAGCCT+TGG | - | Chr7:55496605-55496624 | MsG0780038930.01.T01:CDS | 40.0% | |
| TGTGTTTGGATGGAAGGTTT+AGG | - | Chr7:55497020-55497039 | MsG0780038930.01.T01:intron | 40.0% | |
| ! | ATTTGAAGCGGTTCTCAATG+TGG | + | Chr7:55497285-55497304 | None:intergenic | 40.0% |
| ! | CTGCAGTCTTCATAGCTTTT+TGG | - | Chr7:55497714-55497733 | MsG0780038930.01.T01:CDS | 40.0% |
| ! | GCTCTTTTGTAAGGATCAGA+AGG | + | Chr7:55496603-55496622 | None:intergenic | 40.0% |
| ! | TCTTTATTTGTGCGCATGTG+TGG | - | Chr7:55496849-55496868 | MsG0780038930.01.T01:intron | 40.0% |
| ATGGAAGGTTTAGGAGTGGA+AGG | - | Chr7:55497029-55497048 | MsG0780038930.01.T01:intron | 45.0% | |
| CACCAACCATCCAGTTGTTA+AGG | - | Chr7:55497820-55497839 | MsG0780038930.01.T01:CDS | 45.0% | |
| CTTGGATTGAGGGTTTAGGA+GGG | + | Chr7:55497233-55497252 | None:intergenic | 45.0% | |
| TCATGTGTTCTCGGTTCAGT+TGG | + | Chr7:55496815-55496834 | None:intergenic | 45.0% | |
| TGGAAGGTTTAGGAGTGGAA+GGG | - | Chr7:55497030-55497049 | MsG0780038930.01.T01:intron | 45.0% | |
| TGTGCTTGGATTGAGGGTTT+AGG | + | Chr7:55497237-55497256 | None:intergenic | 45.0% | |
| TTAGGGTGTGCTTGGATTGA+GGG | + | Chr7:55497243-55497262 | None:intergenic | 45.0% | |
| TTCTTTGGTGGAGAGGAGAT+TGG | - | Chr7:55497677-55497696 | MsG0780038930.01.T01:CDS | 45.0% | |
| TTGAGTATGTCGATGAGACC+TGG | - | Chr7:55496559-55496578 | MsG0780038930.01.T01:CDS | 45.0% | |
| TTGGATGGAAGGTTTAGGAG+TGG | - | Chr7:55497025-55497044 | MsG0780038930.01.T01:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | + | Chr7:55497232-55497251 | None:intergenic | 45.0% | |
| ! | AACTTCACTGAGGGTGTGTT+TGG | - | Chr7:55497006-55497025 | MsG0780038930.01.T01:intron | 45.0% |
| ! | ACCAGTGTTTAAGTGCTGCA+CGG | - | Chr7:55497558-55497577 | MsG0780038930.01.T01:intron | 45.0% |
| ! | AGAGACATTTAGGGTGTGCT+TGG | + | Chr7:55497251-55497270 | None:intergenic | 45.0% |
| ! | TGTTCTCGGTTCAGTTGGTA+GGG | + | Chr7:55496810-55496829 | None:intergenic | 45.0% |
| ! | TTTAGGGTGTGCTTGGATTG+AGG | + | Chr7:55497244-55497263 | None:intergenic | 45.0% |
| AAGTCCATTTGTGAGCAGGG+TGG | - | Chr7:55496383-55496402 | MsG0780038930.01.T01:CDS | 50.0% | |
| AGGGATCGGAGTTCGAACTT+CGG | + | Chr7:55496769-55496788 | None:intergenic | 50.0% | |
| ATCTCCACCCTGCTCACAAA+TGG | + | Chr7:55496390-55496409 | None:intergenic | 50.0% | |
| CACACCCTCAGTGAAGTTTG+TGG | + | Chr7:55497004-55497023 | None:intergenic | 50.0% | |
| GCCAAAAGTCCTTCTCTAGG+AGG | + | Chr7:55497854-55497873 | None:intergenic | 50.0% | |
| GCTTGGATTGAGGGTTTAGG+AGG | + | Chr7:55497234-55497253 | None:intergenic | 50.0% | |
| GGCAAGTCCATTTGTGAGCA+GGG | - | Chr7:55496380-55496399 | MsG0780038930.01.T01:CDS | 50.0% | |
| GTGTTCTCGGTTCAGTTGGT+AGG | + | Chr7:55496811-55496830 | None:intergenic | 50.0% | |
| TAGGAGTGGAAGGGAGATGA+GGG | - | Chr7:55497039-55497058 | MsG0780038930.01.T01:intron | 50.0% | |
| TCCGTGCAGCACTTAAACAC+TGG | + | Chr7:55497562-55497581 | None:intergenic | 50.0% | |
| TGGCAAGTCCATTTGTGAGC+AGG | - | Chr7:55496379-55496398 | MsG0780038930.01.T01:CDS | 50.0% | |
| TTAGGAGTGGAAGGGAGATG+AGG | - | Chr7:55497038-55497057 | MsG0780038930.01.T01:intron | 50.0% | |
| ! | AAAGAGCCTTGGCTCGTTTC+TGG | - | Chr7:55496616-55496635 | MsG0780038930.01.T01:CDS | 50.0% |
| ! | CGAGCCAAGGCTCTTTTGTA+AGG | + | Chr7:55496612-55496631 | None:intergenic | 50.0% |
| ! | GCCTCCTAGAGAAGGACTTT+TGG | - | Chr7:55497850-55497869 | MsG0780038930.01.T01:CDS | 50.0% |
| ! | TCACTGAGGGTGTGTTTGGA+TGG | - | Chr7:55497010-55497029 | MsG0780038930.01.T01:intron | 50.0% |
| ! | TGAGGGTGTGTTTGGATGGA+AGG | - | Chr7:55497014-55497033 | MsG0780038930.01.T01:intron | 50.0% |
| ATTGAGGGTTTAGGAGGGGC+AGG | + | Chr7:55497228-55497247 | None:intergenic | 55.0% | |
| CTTGGTCCAGAAACGAGCCA+AGG | + | Chr7:55496625-55496644 | None:intergenic | 55.0% | |
| TTGAGGGTTTAGGAGGGGCA+GGG | + | Chr7:55497227-55497246 | None:intergenic | 55.0% | |
| GGTTTAGGAGGGGCAGGGAG+AGG | + | Chr7:55497222-55497241 | None:intergenic | 65.0% | |
| TAGGAGGGGCAGGGAGAGGA+GGG | + | Chr7:55497218-55497237 | None:intergenic | 65.0% | |
| TTAGGAGGGGCAGGGAGAGG+AGG | + | Chr7:55497219-55497238 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 55496339 | 55497916 | 55496339 | ID=MsG0780038930.01;Name=MsG0780038930.01 |
| Chr7 | mRNA | 55496339 | 55497916 | 55496339 | ID=MsG0780038930.01.T01;Parent=MsG0780038930.01;Name=MsG0780038930.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|224 |
| Chr7 | exon | 55497596 | 55497916 | 55497596 | ID=MsG0780038930.01.T01:exon:15487;Parent=MsG0780038930.01.T01 |
| Chr7 | exon | 55496339 | 55496692 | 55496339 | ID=MsG0780038930.01.T01:exon:15486;Parent=MsG0780038930.01.T01 |
| Chr7 | CDS | 55497596 | 55497916 | 55497596 | ID=MsG0780038930.01.T01:cds;Parent=MsG0780038930.01.T01 |
| Chr7 | CDS | 55496339 | 55496692 | 55496339 | ID=MsG0780038930.01.T01:cds;Parent=MsG0780038930.01.T01 |
| Gene Sequence |
| Protein sequence |
