Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026148.01.T01 | XP_003613754.1 | 92 | 225 | 18 | 0 | 1 | 225 | 1 | 225 | 2.21E-152 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026148.01.T01 | Q9CA57 | 43.182 | 220 | 124 | 1 | 1 | 220 | 1 | 219 | 8.02E-65 | 203 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026148.01.T01 | G7KDY4 | 92.000 | 225 | 18 | 0 | 1 | 225 | 1 | 225 | 1.05e-152 | 432 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048134.01 | MsG0580026148.01 | 0.807900 | 4.031895e-50 | 2.272780e-47 |
| MsG0080048509.01 | MsG0580026148.01 | 0.801553 | 8.527346e-49 | 4.084144e-46 |
| MsG0080048889.01 | MsG0580026148.01 | 0.801738 | 7.815984e-49 | 3.760855e-46 |
| MsG0180000287.01 | MsG0580026148.01 | 0.826396 | 2.776333e-54 | 2.600593e-51 |
| MsG0180000367.01 | MsG0580026148.01 | 0.815482 | 9.040435e-52 | 6.240879e-49 |
| MsG0180000399.01 | MsG0580026148.01 | 0.812316 | 4.507782e-51 | 2.856807e-48 |
| MsG0180001079.01 | MsG0580026148.01 | 0.805416 | 1.349171e-49 | 7.133738e-47 |
| MsG0180001503.01 | MsG0580026148.01 | 0.819546 | 1.097346e-52 | 8.470009e-50 |
| MsG0180001513.01 | MsG0580026148.01 | 0.820051 | 8.411710e-53 | 6.585310e-50 |
| MsG0180001515.01 | MsG0580026148.01 | 0.824409 | 8.200045e-54 | 7.256489e-51 |
| MsG0180002255.01 | MsG0580026148.01 | 0.813159 | 2.947325e-51 | 1.910024e-48 |
| MsG0180003375.01 | MsG0580026148.01 | 0.825970 | 3.505680e-54 | 3.244315e-51 |
| MsG0180004059.01 | MsG0580026148.01 | 0.823094 | 1.666655e-53 | 1.421224e-50 |
| MsG0180004359.01 | MsG0580026148.01 | 0.802348 | 5.853767e-49 | 2.861029e-46 |
| MsG0180005353.01 | MsG0580026148.01 | 0.805923 | 1.056117e-49 | 5.657450e-47 |
| MsG0280011267.01 | MsG0580026148.01 | 0.831695 | 1.443171e-55 | 1.578142e-52 |
| MsG0280011269.01 | MsG0580026148.01 | 0.800178 | 1.628042e-48 | 7.530525e-46 |
| MsG0380011968.01 | MsG0580026148.01 | 0.812945 | 3.283206e-51 | 2.115533e-48 |
| MsG0380011974.01 | MsG0580026148.01 | 0.816952 | 4.242035e-52 | 3.048650e-49 |
| MsG0380012889.01 | MsG0580026148.01 | 0.850615 | 1.514459e-60 | 2.983649e-57 |
| MsG0380012981.01 | MsG0580026148.01 | 0.805093 | 1.576805e-49 | 8.268395e-47 |
| MsG0380013212.01 | MsG0580026148.01 | 0.814966 | 1.177008e-51 | 8.010806e-49 |
| MsG0380013213.01 | MsG0580026148.01 | 0.832978 | 6.943018e-56 | 7.886751e-53 |
| MsG0380013214.01 | MsG0580026148.01 | 0.831166 | 1.947268e-55 | 2.096066e-52 |
| MsG0380013219.01 | MsG0580026148.01 | 0.840993 | 6.219115e-58 | 9.012172e-55 |
| MsG0380013226.01 | MsG0580026148.01 | 0.851261 | 9.956553e-61 | 2.003801e-57 |
| MsG0380013239.01 | MsG0580026148.01 | 0.812521 | 4.065093e-51 | 2.590452e-48 |
| MsG0380013272.01 | MsG0580026148.01 | 0.805937 | 1.048707e-49 | 5.619942e-47 |
| MsG0380013415.01 | MsG0580026148.01 | 0.804738 | 1.870152e-49 | 9.718343e-47 |
| MsG0380014344.01 | MsG0580026148.01 | 0.808174 | 3.526158e-50 | 2.002327e-47 |
| MsG0380014410.01 | MsG0580026148.01 | 0.801541 | 8.574789e-49 | 4.105681e-46 |
| MsG0380014642.01 | MsG0580026148.01 | -0.801885 | 7.288746e-49 | 3.520665e-46 |
| MsG0480018559.01 | MsG0580026148.01 | 0.814028 | 1.898160e-51 | 1.259565e-48 |
| MsG0480018622.01 | MsG0580026148.01 | 0.803606 | 3.216895e-49 | 1.623609e-46 |
| MsG0480019346.01 | MsG0580026148.01 | 0.819201 | 1.315222e-52 | 1.005424e-49 |
| MsG0480019348.01 | MsG0580026148.01 | 0.824469 | 7.938562e-54 | 7.037525e-51 |
| MsG0480019484.01 | MsG0580026148.01 | -0.802176 | 6.352773e-49 | 3.091143e-46 |
| MsG0480019666.01 | MsG0580026148.01 | 0.816241 | 6.119338e-52 | 4.312869e-49 |
| MsG0480020539.01 | MsG0580026148.01 | 0.801233 | 9.919728e-49 | 4.712947e-46 |
| MsG0480020814.01 | MsG0580026148.01 | 0.815440 | 9.233383e-52 | 6.366525e-49 |
| MsG0480021129.01 | MsG0580026148.01 | 0.815173 | 1.058817e-51 | 7.246601e-49 |
| MsG0480021133.01 | MsG0580026148.01 | 0.859455 | 4.088641e-63 | 1.080469e-59 |
| MsG0480021234.01 | MsG0580026148.01 | 0.802128 | 6.498346e-49 | 3.158117e-46 |
| MsG0480021360.01 | MsG0580026148.01 | 0.808033 | 3.777316e-50 | 2.136843e-47 |
| MsG0480021551.01 | MsG0580026148.01 | 0.820201 | 7.772626e-53 | 6.109951e-50 |
| MsG0480021573.01 | MsG0580026148.01 | 0.824871 | 6.383096e-54 | 5.725118e-51 |
| MsG0480023322.01 | MsG0580026148.01 | 0.805885 | 1.075359e-49 | 5.755123e-47 |
| MsG0480023429.01 | MsG0580026148.01 | 0.848297 | 6.705769e-60 | 1.225063e-56 |
| MsG0480023432.01 | MsG0580026148.01 | 0.804516 | 2.081043e-49 | 1.075088e-46 |
| MsG0580025007.01 | MsG0580026148.01 | 0.808256 | 3.386913e-50 | 1.927403e-47 |
| MsG0580025023.01 | MsG0580026148.01 | 0.807964 | 3.907469e-50 | 2.206432e-47 |
| MsG0580025024.01 | MsG0580026148.01 | 0.829312 | 5.523394e-55 | 5.633318e-52 |
| MsG0580025105.01 | MsG0580026148.01 | -0.803935 | 2.749560e-49 | 1.399576e-46 |
| MsG0580025193.01 | MsG0580026148.01 | 0.818964 | 1.488918e-52 | 1.130925e-49 |
| MsG0580025961.01 | MsG0580026148.01 | 0.845618 | 3.628736e-59 | 6.082076e-56 |
| MsG0380015659.01 | MsG0580026148.01 | 0.807446 | 5.033790e-50 | 2.804382e-47 |
| MsG0380015711.01 | MsG0580026148.01 | 0.806449 | 8.181709e-50 | 4.442114e-47 |
| MsG0380016299.01 | MsG0580026148.01 | 0.816918 | 4.315583e-52 | 3.098412e-49 |
| MsG0380016476.01 | MsG0580026148.01 | 0.807647 | 4.564301e-50 | 2.555982e-47 |
| MsG0380017168.01 | MsG0580026148.01 | 0.808090 | 3.673154e-50 | 2.081125e-47 |
| MsG0380017200.01 | MsG0580026148.01 | 0.801586 | 8.396379e-49 | 4.024650e-46 |
| MsG0380017901.01 | MsG0580026148.01 | 0.800897 | 1.161869e-48 | 5.473581e-46 |
| MsG0480018406.01 | MsG0580026148.01 | 0.824327 | 8.570023e-54 | 7.566648e-51 |
| MsG0480018439.01 | MsG0580026148.01 | 0.836402 | 9.555526e-57 | 1.202885e-53 |
| MsG0480018440.01 | MsG0580026148.01 | 0.805566 | 1.254618e-49 | 6.659361e-47 |
| MsG0580026148.01 | MsG0580026492.01 | 0.804048 | 2.604210e-49 | 1.329382e-46 |
| MsG0580026148.01 | MsG0580026521.01 | 0.810396 | 1.177124e-50 | 7.087290e-48 |
| MsG0580026148.01 | MsG0580027276.01 | -0.821894 | 3.168019e-53 | 2.610835e-50 |
| MsG0580026148.01 | MsG0580027751.01 | 0.826228 | 3.043073e-54 | 2.836913e-51 |
| MsG0580026148.01 | MsG0580027752.01 | 0.818340 | 2.062922e-52 | 1.540094e-49 |
| MsG0580026148.01 | MsG0580027753.01 | 0.825745 | 3.964428e-54 | 3.645423e-51 |
| MsG0580026148.01 | MsG0580027777.01 | 0.812191 | 4.801021e-51 | 3.032392e-48 |
| MsG0580026148.01 | MsG0580029240.01 | 0.808979 | 2.373716e-50 | 1.376641e-47 |
| MsG0580026148.01 | MsG0580029937.01 | 0.804242 | 2.373322e-49 | 1.217474e-46 |
| MsG0580026148.01 | MsG0580029938.01 | 0.804799 | 1.815983e-49 | 9.451313e-47 |
| MsG0580026148.01 | MsG0680030960.01 | 0.805637 | 1.212661e-49 | 6.448542e-47 |
| MsG0580026148.01 | MsG0680034238.01 | 0.804379 | 2.221747e-49 | 1.143834e-46 |
| MsG0580026148.01 | MsG0680034310.01 | 0.819328 | 1.230338e-52 | 9.438198e-50 |
| MsG0580026148.01 | MsG0680034357.01 | 0.810677 | 1.023496e-50 | 6.209092e-48 |
| MsG0580026148.01 | MsG0680034418.01 | 0.800749 | 1.245362e-48 | 5.844599e-46 |
| MsG0580026148.01 | MsG0680034969.01 | 0.817061 | 4.008663e-52 | 2.889413e-49 |
| MsG0580026148.01 | MsG0680034974.01 | 0.834353 | 3.149014e-56 | 3.727515e-53 |
| MsG0580026148.01 | MsG0680034978.01 | 0.842955 | 1.885182e-58 | 2.904670e-55 |
| MsG0580026148.01 | MsG0780036054.01 | 0.811523 | 6.709066e-51 | 4.162385e-48 |
| MsG0580026148.01 | MsG0780036208.01 | 0.830298 | 3.177199e-55 | 3.333745e-52 |
| MsG0580026148.01 | MsG0780036376.01 | 0.812685 | 3.743050e-51 | 2.395515e-48 |
| MsG0580026148.01 | MsG0780036472.01 | 0.804501 | 2.095821e-49 | 1.082316e-46 |
| MsG0580026148.01 | MsG0780036649.01 | 0.837892 | 3.973941e-57 | 5.234624e-54 |
| MsG0580026148.01 | MsG0780036839.01 | 0.826277 | 2.962767e-54 | 2.765909e-51 |
| MsG0580026148.01 | MsG0780038307.01 | 0.831729 | 1.415364e-55 | 1.549454e-52 |
| MsG0580026148.01 | MsG0780038519.01 | 0.834313 | 3.222191e-56 | 3.809810e-53 |
| MsG0580026148.01 | MsG0780038914.01 | 0.828948 | 6.767570e-55 | 6.826905e-52 |
| MsG0580026148.01 | MsG0780039237.01 | 0.811040 | 8.542456e-51 | 5.232742e-48 |
| MsG0580026148.01 | MsG0780039431.01 | 0.811787 | 5.879157e-51 | 3.672910e-48 |
| MsG0580026148.01 | MsG0780039855.01 | 0.803172 | 3.957123e-49 | 1.975043e-46 |
| MsG0580026148.01 | MsG0780039883.01 | 0.839103 | 1.935837e-57 | 2.645898e-54 |
| MsG0580026148.01 | MsG0780039979.01 | 0.808770 | 2.630654e-50 | 1.517156e-47 |
| MsG0580026148.01 | MsG0780040154.01 | -0.803330 | 3.671053e-49 | 1.839606e-46 |
| MsG0580026148.01 | MsG0780040497.01 | 0.806130 | 9.551503e-50 | 5.143780e-47 |
| MsG0580026148.01 | MsG0780040498.01 | 0.828919 | 6.876851e-55 | 6.931383e-52 |
| MsG0580026148.01 | MsG0780040670.01 | 0.807744 | 4.352585e-50 | 2.443764e-47 |
| MsG0580026148.01 | MsG0780040991.01 | 0.801777 | 7.672987e-49 | 3.695805e-46 |
| MsG0580026148.01 | MsG0780041036.01 | 0.846944 | 1.579638e-59 | 2.763490e-56 |
| MsG0580026148.01 | MsG0880041978.01 | 0.814026 | 1.899788e-51 | 1.260572e-48 |
| MsG0580026148.01 | MsG0880042122.01 | 0.831740 | 1.406481e-55 | 1.540189e-52 |
| MsG0580026148.01 | MsG0880042642.01 | 0.802909 | 4.485222e-49 | 2.223650e-46 |
| MsG0580026148.01 | MsG0880043217.01 | 0.822395 | 2.423881e-53 | 2.026476e-50 |
| MsG0580026148.01 | MsG0880043530.01 | 0.847173 | 1.366859e-59 | 2.409113e-56 |
| MsG0580026148.01 | MsG0880043550.01 | 0.802721 | 4.904195e-49 | 2.419827e-46 |
| MsG0580026148.01 | MsG0880043906.01 | 0.813791 | 2.140926e-51 | 1.411536e-48 |
| MsG0580026148.01 | MsG0880043997.01 | 0.803363 | 3.613760e-49 | 1.812377e-46 |
| MsG0580026148.01 | MsG0880044317.01 | -0.811150 | 8.084158e-51 | 4.966274e-48 |
| MsG0580026148.01 | MsG0880045851.01 | 0.853897 | 1.762969e-61 | 3.867935e-58 |
| MsG0580026148.01 | MsG0880045854.01 | 0.837311 | 5.603377e-57 | 7.249900e-54 |
| MsG0580026148.01 | MsG0880046271.01 | 0.800392 | 1.472759e-48 | 6.849602e-46 |
| MsG0580026148.01 | MsG0880046273.01 | 0.823770 | 1.158331e-53 | 1.006889e-50 |
| MsG0580026148.01 | MsG0880046402.01 | 0.807545 | 4.797197e-50 | 2.679367e-47 |
| MsG0580026148.01 | MsG0880046932.01 | 0.807650 | 4.556239e-50 | 2.551724e-47 |
| MsG0580026148.01 | MsG0880047383.01 | 0.814723 | 1.332276e-51 | 9.008688e-49 |
| MsG0580026148.01 | MsG0880047697.01 | 0.813402 | 2.606071e-51 | 1.700303e-48 |
| MsG0580026148.01 | MsG0880047714.01 | 0.822959 | 1.791820e-53 | 1.522114e-50 |
| MsG0280006575.01 | MsG0580026148.01 | 0.801807 | 7.562826e-49 | 3.645630e-46 |
| MsG0280007670.01 | MsG0580026148.01 | 0.800773 | 1.231350e-48 | 5.782263e-46 |
| MsG0280007678.01 | MsG0580026148.01 | 0.829963 | 3.836582e-55 | 3.987028e-52 |
| MsG0280008495.01 | MsG0580026148.01 | 0.804810 | 1.806456e-49 | 9.404718e-47 |
| MsG0280008659.01 | MsG0580026148.01 | 0.812615 | 3.877847e-51 | 2.477157e-48 |
| MsG0280009232.01 | MsG0580026148.01 | 0.818535 | 1.863242e-52 | 1.398496e-49 |
| MsG0280009253.01 | MsG0580026148.01 | 0.837045 | 6.553955e-57 | 8.411603e-54 |
| MsG0280009526.01 | MsG0580026148.01 | 0.801850 | 7.410275e-49 | 3.576072e-46 |
| MsG0280010425.01 | MsG0580026148.01 | 0.820425 | 6.908014e-53 | 5.464222e-50 |
| MsG0280010515.01 | MsG0580026148.01 | 0.808930 | 2.430767e-50 | 1.407877e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0580026148.01 | MsG0580026149.01 | PPI |
| MsG0880047767.01 | MsG0580026148.01 | PPI |
| MsG0580026301.01 | MsG0580026148.01 | PPI |
| MsG0880047767.01 | MsG0580026148.01 | PPI |
| MsG0580026148.01 | MsG0880047766.01 | PPI |
| MsG0880047766.01 | MsG0580026148.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026148.01.T01 | MTR_5g040430 | 92.000 | 225 | 18 | 0 | 1 | 225 | 1 | 225 | 2.67e-156 | 432 |
| MsG0580026148.01.T01 | MTR_4g019780 | 50.233 | 215 | 101 | 2 | 7 | 221 | 8 | 216 | 5.26e-67 | 206 |
| MsG0580026148.01.T01 | MTR_4g019790 | 43.694 | 222 | 117 | 4 | 1 | 221 | 1 | 215 | 4.06e-61 | 191 |
| MsG0580026148.01.T01 | MTR_7g065660 | 42.342 | 222 | 120 | 3 | 1 | 221 | 1 | 215 | 5.86e-57 | 180 |
| MsG0580026148.01.T01 | MTR_1g090070 | 41.176 | 221 | 121 | 4 | 6 | 223 | 8 | 222 | 8.96e-56 | 177 |
| MsG0580026148.01.T01 | MTR_7g065630 | 41.441 | 222 | 118 | 4 | 1 | 221 | 19 | 229 | 9.62e-56 | 178 |
| MsG0580026148.01.T01 | MTR_3g099757 | 43.439 | 221 | 117 | 3 | 1 | 221 | 1 | 213 | 2.17e-55 | 176 |
| MsG0580026148.01.T01 | MTR_7g065600 | 41.441 | 222 | 122 | 3 | 1 | 221 | 1 | 215 | 3.03e-55 | 176 |
| MsG0580026148.01.T01 | MTR_1g090060 | 42.661 | 218 | 121 | 2 | 6 | 223 | 2 | 215 | 4.32e-55 | 176 |
| MsG0580026148.01.T01 | MTR_7g065720 | 41.704 | 223 | 121 | 3 | 1 | 221 | 1 | 216 | 5.54e-55 | 175 |
| MsG0580026148.01.T01 | MTR_7g065590 | 41.441 | 222 | 122 | 3 | 1 | 221 | 1 | 215 | 6.20e-55 | 175 |
| MsG0580026148.01.T01 | MTR_4g059730 | 42.534 | 221 | 119 | 5 | 5 | 223 | 2 | 216 | 1.27e-54 | 174 |
| MsG0580026148.01.T01 | MTR_7g065750 | 43.049 | 223 | 118 | 4 | 1 | 221 | 1 | 216 | 1.69e-54 | 174 |
| MsG0580026148.01.T01 | MTR_7g065740 | 40.807 | 223 | 123 | 3 | 1 | 221 | 1 | 216 | 8.43e-54 | 172 |
| MsG0580026148.01.T01 | MTR_8g087410 | 42.593 | 216 | 116 | 3 | 1 | 216 | 2 | 209 | 9.73e-54 | 172 |
| MsG0580026148.01.T01 | MTR_7g065230 | 43.243 | 222 | 113 | 4 | 1 | 221 | 1 | 210 | 1.25e-53 | 172 |
| MsG0580026148.01.T01 | MTR_7g065290 | 41.892 | 222 | 121 | 3 | 1 | 221 | 1 | 215 | 2.95e-53 | 171 |
| MsG0580026148.01.T01 | MTR_7g065265 | 41.284 | 218 | 120 | 3 | 1 | 217 | 1 | 211 | 7.18e-53 | 170 |
| MsG0580026148.01.T01 | MTR_7g065270 | 40.826 | 218 | 121 | 3 | 1 | 217 | 1 | 211 | 7.36e-51 | 165 |
| MsG0580026148.01.T01 | MTR_7g065260 | 41.509 | 212 | 118 | 2 | 1 | 212 | 8 | 213 | 1.27e-50 | 164 |
| MsG0580026148.01.T01 | MTR_8g087425 | 39.171 | 217 | 126 | 2 | 5 | 221 | 3 | 213 | 1.33e-50 | 164 |
| MsG0580026148.01.T01 | MTR_1g090100 | 41.667 | 216 | 122 | 2 | 8 | 223 | 3 | 214 | 1.89e-50 | 164 |
| MsG0580026148.01.T01 | MTR_2g070150 | 38.095 | 210 | 123 | 2 | 5 | 214 | 2 | 204 | 3.71e-50 | 162 |
| MsG0580026148.01.T01 | MTR_2g070060 | 36.771 | 223 | 131 | 3 | 5 | 224 | 2 | 217 | 1.35e-49 | 161 |
| MsG0580026148.01.T01 | MTR_7g065640 | 40.541 | 222 | 106 | 4 | 1 | 221 | 1 | 197 | 2.74e-49 | 160 |
| MsG0580026148.01.T01 | MTR_2g070180 | 37.559 | 213 | 122 | 3 | 5 | 215 | 2 | 205 | 3.97e-49 | 160 |
| MsG0580026148.01.T01 | MTR_6g080440 | 40.284 | 211 | 120 | 2 | 6 | 216 | 2 | 206 | 1.23e-48 | 159 |
| MsG0580026148.01.T01 | MTR_2g070130 | 36.771 | 223 | 131 | 3 | 5 | 224 | 2 | 217 | 4.27e-48 | 157 |
| MsG0580026148.01.T01 | MTR_1g090150 | 39.720 | 214 | 124 | 3 | 7 | 220 | 3 | 211 | 4.40e-48 | 158 |
| MsG0580026148.01.T01 | MTR_1g090090 | 40.654 | 214 | 119 | 4 | 6 | 217 | 2 | 209 | 1.26e-47 | 157 |
| MsG0580026148.01.T01 | MTR_2g070200 | 37.321 | 209 | 123 | 3 | 5 | 212 | 2 | 203 | 2.73e-47 | 155 |
| MsG0580026148.01.T01 | MTR_2g070120 | 39.623 | 212 | 119 | 4 | 5 | 215 | 2 | 205 | 4.67e-47 | 155 |
| MsG0580026148.01.T01 | MTR_5g037380 | 37.209 | 215 | 131 | 3 | 5 | 216 | 3 | 216 | 5.19e-47 | 155 |
| MsG0580026148.01.T01 | MTR_7g065710 | 38.942 | 208 | 115 | 4 | 8 | 214 | 5 | 201 | 9.29e-47 | 154 |
| MsG0580026148.01.T01 | MTR_8g061950 | 40.000 | 220 | 128 | 3 | 6 | 222 | 4 | 222 | 2.29e-46 | 154 |
| MsG0580026148.01.T01 | MTR_2g070140 | 37.624 | 202 | 119 | 2 | 21 | 222 | 2 | 196 | 8.86e-46 | 151 |
| MsG0580026148.01.T01 | MTR_7g065680 | 40.541 | 222 | 120 | 4 | 1 | 221 | 1 | 211 | 2.11e-45 | 150 |
| MsG0580026148.01.T01 | MTR_7g065700 | 42.326 | 215 | 112 | 5 | 1 | 214 | 1 | 204 | 6.92e-45 | 149 |
| MsG0580026148.01.T01 | MTR_2g070210 | 35.111 | 225 | 134 | 4 | 5 | 224 | 2 | 219 | 1.93e-43 | 145 |
| MsG0580026148.01.T01 | MTR_1g115195 | 37.209 | 215 | 132 | 3 | 6 | 220 | 2 | 213 | 3.72e-43 | 145 |
| MsG0580026148.01.T01 | MTR_2g070070 | 35.874 | 223 | 133 | 3 | 5 | 224 | 2 | 217 | 1.46e-42 | 143 |
| MsG0580026148.01.T01 | MTR_8g056940 | 37.379 | 206 | 120 | 4 | 5 | 209 | 2 | 199 | 1.81e-42 | 143 |
| MsG0580026148.01.T01 | MTR_2g070110 | 37.220 | 223 | 129 | 5 | 5 | 224 | 2 | 216 | 1.58e-41 | 140 |
| MsG0580026148.01.T01 | MTR_3g467420 | 33.173 | 208 | 131 | 3 | 6 | 212 | 8 | 208 | 3.45e-40 | 137 |
| MsG0580026148.01.T01 | MTR_5g076900 | 36.364 | 209 | 124 | 4 | 8 | 215 | 7 | 207 | 7.93e-40 | 136 |
| MsG0580026148.01.T01 | MTR_3g467430 | 33.333 | 210 | 132 | 3 | 4 | 212 | 6 | 208 | 6.16e-39 | 134 |
| MsG0580026148.01.T01 | MTR_0186s0030 | 46.970 | 132 | 68 | 2 | 5 | 135 | 2 | 132 | 1.72e-37 | 128 |
| MsG0580026148.01.T01 | MTR_4g124130 | 39.459 | 185 | 104 | 3 | 6 | 187 | 3 | 182 | 1.42e-36 | 128 |
| MsG0580026148.01.T01 | MTR_2g072120 | 44.286 | 70 | 39 | 0 | 51 | 120 | 2 | 71 | 3.77e-20 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026148.01.T01 | AT1G74590 | 43.182 | 220 | 124 | 1 | 1 | 220 | 1 | 219 | 8.18e-66 | 203 |
| MsG0580026148.01.T01 | AT5G62480 | 44.000 | 225 | 122 | 3 | 1 | 221 | 1 | 225 | 1.23e-64 | 201 |
| MsG0580026148.01.T01 | AT3G09270 | 42.922 | 219 | 119 | 2 | 8 | 225 | 7 | 220 | 2.97e-58 | 184 |
| MsG0580026148.01.T01 | AT2G29450 | 46.544 | 217 | 104 | 6 | 4 | 216 | 3 | 211 | 2.64e-55 | 176 |
| MsG0580026148.01.T01 | AT2G29490 | 38.767 | 227 | 130 | 4 | 1 | 225 | 1 | 220 | 1.33e-53 | 172 |
| MsG0580026148.01.T01 | AT2G29480 | 40.000 | 225 | 126 | 4 | 1 | 223 | 1 | 218 | 1.93e-53 | 171 |
| MsG0580026148.01.T01 | AT2G29460 | 37.778 | 225 | 131 | 4 | 1 | 223 | 1 | 218 | 7.60e-53 | 170 |
| MsG0580026148.01.T01 | AT2G29440 | 42.857 | 217 | 112 | 6 | 1 | 214 | 1 | 208 | 1.14e-52 | 169 |
| MsG0580026148.01.T01 | AT2G29420 | 38.991 | 218 | 125 | 3 | 5 | 221 | 7 | 217 | 4.81e-52 | 168 |
| MsG0580026148.01.T01 | AT2G29470 | 37.885 | 227 | 131 | 5 | 1 | 224 | 1 | 220 | 2.77e-49 | 161 |
| MsG0580026148.01.T01 | AT5G62480 | 37.778 | 225 | 110 | 4 | 1 | 221 | 1 | 199 | 7.64e-48 | 157 |
| MsG0580026148.01.T01 | AT5G62480 | 37.333 | 225 | 110 | 4 | 1 | 221 | 1 | 198 | 4.15e-47 | 155 |
| MsG0580026148.01.T01 | AT1G78380 | 34.906 | 212 | 131 | 2 | 5 | 216 | 2 | 206 | 1.77e-46 | 154 |
| MsG0580026148.01.T01 | AT1G10370 | 37.443 | 219 | 136 | 1 | 5 | 222 | 3 | 221 | 9.08e-46 | 152 |
| MsG0580026148.01.T01 | AT1G78320 | 35.211 | 213 | 131 | 2 | 7 | 219 | 4 | 209 | 1.57e-45 | 151 |
| MsG0580026148.01.T01 | AT1G17180 | 36.321 | 212 | 128 | 2 | 5 | 216 | 2 | 206 | 2.77e-45 | 150 |
| MsG0580026148.01.T01 | AT1G27130 | 36.406 | 217 | 134 | 3 | 4 | 217 | 3 | 218 | 7.54e-45 | 149 |
| MsG0580026148.01.T01 | AT1G53680 | 38.865 | 229 | 128 | 5 | 1 | 224 | 1 | 222 | 2.40e-44 | 148 |
| MsG0580026148.01.T01 | AT1G10360 | 37.089 | 213 | 133 | 1 | 5 | 216 | 3 | 215 | 3.57e-44 | 148 |
| MsG0580026148.01.T01 | AT1G78340 | 37.430 | 179 | 107 | 1 | 5 | 183 | 2 | 175 | 8.99e-44 | 146 |
| MsG0580026148.01.T01 | AT1G78370 | 32.536 | 209 | 134 | 2 | 9 | 217 | 6 | 207 | 2.55e-43 | 145 |
| MsG0580026148.01.T01 | AT1G17170 | 37.788 | 217 | 123 | 4 | 5 | 219 | 2 | 208 | 3.05e-43 | 145 |
| MsG0580026148.01.T01 | AT3G43800 | 34.956 | 226 | 136 | 5 | 1 | 223 | 1 | 218 | 2.45e-42 | 143 |
| MsG0580026148.01.T01 | AT1G69930 | 36.190 | 210 | 132 | 2 | 8 | 216 | 13 | 221 | 4.98e-42 | 142 |
| MsG0580026148.01.T01 | AT1G59670 | 37.615 | 218 | 131 | 5 | 1 | 215 | 1 | 216 | 7.62e-42 | 142 |
| MsG0580026148.01.T01 | AT1G69920 | 35.849 | 212 | 131 | 4 | 2 | 210 | 30 | 239 | 1.12e-40 | 140 |
| MsG0580026148.01.T01 | AT1G78360 | 33.796 | 216 | 135 | 4 | 5 | 219 | 2 | 210 | 5.73e-40 | 137 |
| MsG0580026148.01.T01 | AT1G59700 | 37.900 | 219 | 131 | 5 | 1 | 216 | 1 | 217 | 1.36e-39 | 136 |
| MsG0580026148.01.T01 | AT1G17190 | 32.075 | 212 | 137 | 2 | 5 | 216 | 3 | 207 | 5.43e-39 | 134 |
| MsG0580026148.01.T01 | AT1G27140 | 34.375 | 224 | 142 | 3 | 4 | 223 | 3 | 225 | 2.83e-38 | 133 |
| MsG0580026148.01.T01 | AT1G78320 | 29.577 | 213 | 116 | 3 | 7 | 219 | 4 | 182 | 2.04e-30 | 111 |
Find 60 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAATACATCGATGAAATT+TGG | 0.107039 | 5:+31396583 | MsG0580026148.01.T01:CDS |
| AAGGTATACCCTTCACTTTA+AGG | 0.260399 | 5:-31396437 | None:intergenic |
| CTTCCTTTATGCACGAGAAT+TGG | 0.274141 | 5:-31396534 | None:intergenic |
| TTCTCTCTTCCCCTCGAGAT+TGG | 0.312134 | 5:-31397347 | None:intergenic |
| TGAATACATCGATGAAATTT+GGG | 0.316149 | 5:+31396584 | MsG0580026148.01.T01:CDS |
| TCACCAGAGGATGTTCCTTC+AGG | 0.317622 | 5:-31397590 | None:intergenic |
| TCCTCCTCCACATACTTATA+AGG | 0.330006 | 5:-31396456 | None:intergenic |
| GTGTTTCACCGTTGAAGAAT+TGG | 0.344571 | 5:-31397446 | None:intergenic |
| AGGTATACCCTTCACTTTAA+GGG | 0.348321 | 5:-31396436 | None:intergenic |
| AAGTTGTGTTGTTGGGAAAC+TGG | 0.356374 | 5:+31396382 | MsG0580026148.01.T01:CDS |
| GTACAATCCTGTCCATAAAA+AGG | 0.369292 | 5:+31396509 | MsG0580026148.01.T01:CDS |
| TTCCTTTATGCACGAGAATT+GGG | 0.383723 | 5:-31396533 | None:intergenic |
| CGGACTTTAGCCCTTTGATA+AGG | 0.406040 | 5:-31396636 | None:intergenic |
| GCCCTTTGATAAGGATCCTC+TGG | 0.413467 | 5:-31396627 | None:intergenic |
| GTCCCAATTCTCGTGCATAA+AGG | 0.433737 | 5:+31396531 | MsG0580026148.01.T01:CDS |
| ATACTTGTGGTGTTTGAAGA+AGG | 0.446735 | 5:+31397396 | MsG0580026148.01.T01:CDS |
| TTTAAGGGCTAGTTCTACTT+TGG | 0.446812 | 5:-31396421 | None:intergenic |
| CACCAGAGGATGTTCCTTCA+GGG | 0.461065 | 5:-31397589 | None:intergenic |
| GGATCCTCTGGCAAGAGGTT+GGG | 0.461982 | 5:-31396615 | None:intergenic |
| TCACTTGTTTCTTCACCCAT+TGG | 0.466957 | 5:-31396360 | None:intergenic |
| TGCCCTGAAGGAACATCCTC+TGG | 0.468440 | 5:+31397587 | MsG0580026148.01.T01:CDS |
| TGGAATATGCGGTAGCTACT+AGG | 0.468988 | 5:-31397327 | None:intergenic |
| GGCCTCTTGAAATGCTTCAT+AGG | 0.472305 | 5:-31397508 | None:intergenic |
| TACTTTCTGATCAAAGTAGT+TGG | 0.476161 | 5:-31396667 | None:intergenic |
| AACAAGTGAAGTTGTGTTGT+TGG | 0.484549 | 5:+31396374 | MsG0580026148.01.T01:CDS |
| ACAAGTGAAGTTGTGTTGTT+GGG | 0.494791 | 5:+31396375 | MsG0580026148.01.T01:CDS |
| ACCTTATAAGTATGTGGAGG+AGG | 0.505083 | 5:+31396455 | MsG0580026148.01.T01:CDS |
| AGGATCCTCTGGCAAGAGGT+TGG | 0.510711 | 5:-31396616 | None:intergenic |
| GCCAGAGGATCCTTATCAAA+GGG | 0.523043 | 5:+31396626 | MsG0580026148.01.T01:CDS |
| AGTTGTGTTGTTGGGAAACT+GGG | 0.523666 | 5:+31396383 | MsG0580026148.01.T01:CDS |
| TACTTGTGGTGTTTGAAGAA+GGG | 0.526991 | 5:+31397397 | MsG0580026148.01.T01:CDS |
| AAAGAAAGCTGCAGAAGACA+TGG | 0.529969 | 5:+31397368 | MsG0580026148.01.T01:CDS |
| ACTTCCTCCTCATGACAAGT+TGG | 0.553330 | 5:+31397620 | MsG0580026148.01.T01:CDS |
| ACTTGTGGTGTTTGAAGAAG+GGG | 0.559414 | 5:+31397398 | MsG0580026148.01.T01:CDS |
| AGAACTAGCCCTTAAAGTGA+AGG | 0.562510 | 5:+31396428 | MsG0580026148.01.T01:CDS |
| TCCTCCTCATGACAAGTTGG+TGG | 0.565432 | 5:+31397623 | MsG0580026148.01.T01:CDS |
| CACCTATGAAGCATTTCAAG+AGG | 0.567937 | 5:+31397506 | MsG0580026148.01.T01:CDS |
| GGGTATACCTTATAAGTATG+TGG | 0.568824 | 5:+31396449 | MsG0580026148.01.T01:CDS |
| TGCCAGAGGATCCTTATCAA+AGG | 0.569024 | 5:+31396625 | MsG0580026148.01.T01:CDS |
| GAAGGAACATCCTCTGGTGA+AGG | 0.571290 | 5:+31397593 | MsG0580026148.01.T01:CDS |
| GAACTAGCCCTTAAAGTGAA+GGG | 0.575201 | 5:+31396429 | MsG0580026148.01.T01:CDS |
| GCCACCAACTTGTCATGAGG+AGG | 0.584492 | 5:-31397624 | None:intergenic |
| AAGCAATTCCAATTCTTCAA+CGG | 0.590305 | 5:+31397438 | MsG0580026148.01.T01:CDS |
| CGTGAAGACCTCTACATCAC+AGG | 0.591485 | 5:-31397529 | None:intergenic |
| GATAAGGATCCTCTGGCAAG+AGG | 0.598863 | 5:-31396620 | None:intergenic |
| CATGTGGGTGAATGCCCTGA+AGG | 0.604982 | 5:+31397575 | MsG0580026148.01.T01:CDS |
| TCAAGAGGCCTGTGATGTAG+AGG | 0.605424 | 5:+31397521 | MsG0580026148.01.T01:CDS |
| ACCGCATATTCCAATCTCGA+GGG | 0.607070 | 5:+31397337 | MsG0580026148.01.T01:CDS |
| TTGGCCACCAACTTGTCATG+AGG | 0.608148 | 5:-31397627 | None:intergenic |
| TTCTTCAACGGTGAAACACT+AGG | 0.614103 | 5:+31397450 | MsG0580026148.01.T01:CDS |
| ACTAGGACTCCTCGACATTG+TGG | 0.623667 | 5:+31397467 | MsG0580026148.01.T01:CDS |
| TTCATAGGTGCAAGAAGTCG+CGG | 0.631066 | 5:-31397493 | None:intergenic |
| CCCCTCGAGATTGGAATATG+CGG | 0.640121 | 5:-31397338 | None:intergenic |
| GGAAGTGTTTCCTTCACCAG+AGG | 0.655838 | 5:-31397603 | None:intergenic |
| TACCGCATATTCCAATCTCG+AGG | 0.660052 | 5:+31397336 | MsG0580026148.01.T01:CDS |
| TATTCCCAACCTCTTGCCAG+AGG | 0.672074 | 5:+31396611 | MsG0580026148.01.T01:CDS |
| CCGCATATTCCAATCTCGAG+GGG | 0.675024 | 5:+31397338 | MsG0580026148.01.T01:CDS |
| TATACCTTATAAGTATGTGG+AGG | 0.683481 | 5:+31396452 | MsG0580026148.01.T01:CDS |
| TCGCGGCTACCACAATGTCG+AGG | 0.706634 | 5:-31397476 | None:intergenic |
| AGACATGGAAGAGATACTTG+TGG | 0.720343 | 5:+31397383 | MsG0580026148.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATATAAGTAGAAAA+GGG | - | Chr5:31396766-31396785 | None:intergenic | 10.0% |
| !! | TATATAAATATAAGTAGAAA+AGG | - | Chr5:31396767-31396786 | None:intergenic | 10.0% |
| !!! | TCCAATAATACTTTTTATTT+TGG | - | Chr5:31397649-31397668 | None:intergenic | 15.0% |
| !! | ATTGGTAAGTTACTTAAAAT+TGG | - | Chr5:31397034-31397053 | None:intergenic | 20.0% |
| !!! | GCCAAAATAAAAAGTATTAT+TGG | + | Chr5:31397645-31397664 | MsG0580026148.01.T01:CDS | 20.0% |
| !!! | TGTCTTCTCTTAATAATTTT+AGG | - | Chr5:31396942-31396961 | None:intergenic | 20.0% |
| ! | AAGTAACTTACCAATAGTTA+TGG | + | Chr5:31397039-31397058 | MsG0580026148.01.T01:intron | 25.0% |
| ! | AATAGTTATGGAGGTAAAAT+AGG | + | Chr5:31397051-31397070 | MsG0580026148.01.T01:intron | 25.0% |
| ! | TGAATACATCGATGAAATTT+GGG | + | Chr5:31396584-31396603 | MsG0580026148.01.T01:CDS | 25.0% |
| ! | TTGAATACATCGATGAAATT+TGG | + | Chr5:31396583-31396602 | MsG0580026148.01.T01:CDS | 25.0% |
| ! | TTGTATCTAACCACTTAAAT+TGG | + | Chr5:31397122-31397141 | MsG0580026148.01.T01:intron | 25.0% |
| !! | CATTTTCTTGTTAGTCAATT+TGG | + | Chr5:31396914-31396933 | MsG0580026148.01.T01:intron | 25.0% |
| !! | TATTTTACCTCCATAACTAT+TGG | - | Chr5:31397052-31397071 | None:intergenic | 25.0% |
| AAGCAATTCCAATTCTTCAA+CGG | + | Chr5:31397438-31397457 | MsG0580026148.01.T01:CDS | 30.0% | |
| ACTGTTATATCAAGTCTCTA+GGG | - | Chr5:31397273-31397292 | None:intergenic | 30.0% | |
| CTTTATCCACTAAAAGAACA+AGG | + | Chr5:31397154-31397173 | MsG0580026148.01.T01:intron | 30.0% | |
| TAACTTACCAATAGTTATGG+AGG | + | Chr5:31397042-31397061 | MsG0580026148.01.T01:intron | 30.0% | |
| TACTGTTATATCAAGTCTCT+AGG | - | Chr5:31397274-31397293 | None:intergenic | 30.0% | |
| TACTTTCTGATCAAAGTAGT+TGG | - | Chr5:31396670-31396689 | None:intergenic | 30.0% | |
| TATACCTTATAAGTATGTGG+AGG | + | Chr5:31396452-31396471 | MsG0580026148.01.T01:CDS | 30.0% | |
| TTCACCCACATGAAAAATTT+CGG | - | Chr5:31397567-31397586 | None:intergenic | 30.0% | |
| ! | AAAAATTTCGGCATCTTTTC+GGG | - | Chr5:31397555-31397574 | None:intergenic | 30.0% |
| ! | GAAAAATTTCGGCATCTTTT+CGG | - | Chr5:31397556-31397575 | None:intergenic | 30.0% |
| !! | TTCTTTTAGTGGATAAAGTG+AGG | - | Chr5:31397152-31397171 | None:intergenic | 30.0% |
| AACAAGTGAAGTTGTGTTGT+TGG | + | Chr5:31396374-31396393 | MsG0580026148.01.T01:CDS | 35.0% | |
| AAGGTATACCCTTCACTTTA+AGG | - | Chr5:31396440-31396459 | None:intergenic | 35.0% | |
| ACTAAAAGAACAAGGTGGAT+AGG | + | Chr5:31397162-31397181 | MsG0580026148.01.T01:intron | 35.0% | |
| AGGTATACCCTTCACTTTAA+GGG | - | Chr5:31396439-31396458 | None:intergenic | 35.0% | |
| ATACTTGTGGTGTTTGAAGA+AGG | + | Chr5:31397396-31397415 | MsG0580026148.01.T01:CDS | 35.0% | |
| CTAAAAGAACAAGGTGGATA+GGG | + | Chr5:31397163-31397182 | MsG0580026148.01.T01:intron | 35.0% | |
| GGGTATACCTTATAAGTATG+TGG | + | Chr5:31396449-31396468 | MsG0580026148.01.T01:CDS | 35.0% | |
| GTACAATCCTGTCCATAAAA+AGG | + | Chr5:31396509-31396528 | MsG0580026148.01.T01:CDS | 35.0% | |
| TACTTGTGGTGTTTGAAGAA+GGG | + | Chr5:31397397-31397416 | MsG0580026148.01.T01:CDS | 35.0% | |
| TAGGGATAAAATTGGCTACT+AGG | - | Chr5:31397255-31397274 | None:intergenic | 35.0% | |
| TATCCACTAAAAGAACAAGG+TGG | + | Chr5:31397157-31397176 | MsG0580026148.01.T01:intron | 35.0% | |
| TTCCTTTATGCACGAGAATT+GGG | - | Chr5:31396536-31396555 | None:intergenic | 35.0% | |
| ! | ACAAGTGAAGTTGTGTTGTT+GGG | + | Chr5:31396375-31396394 | MsG0580026148.01.T01:CDS | 35.0% |
| ! | AGATGCCGAAATTTTTCATG+TGG | + | Chr5:31397559-31397578 | MsG0580026148.01.T01:CDS | 35.0% |
| ! | CAAGTCTCTAGGGATAAAAT+TGG | - | Chr5:31397263-31397282 | None:intergenic | 35.0% |
| ! | GATGCCGAAATTTTTCATGT+GGG | + | Chr5:31397560-31397579 | MsG0580026148.01.T01:CDS | 35.0% |
| ! | TATCCACCTTGTTCTTTTAG+TGG | - | Chr5:31397163-31397182 | None:intergenic | 35.0% |
| !! | TTTAAGGGCTAGTTCTACTT+TGG | - | Chr5:31396424-31396443 | None:intergenic | 35.0% |
| AAAGAAAGCTGCAGAAGACA+TGG | + | Chr5:31397368-31397387 | MsG0580026148.01.T01:CDS | 40.0% | |
| AACCTATTAGCTAGGTACGA+CGG | + | Chr5:31397091-31397110 | MsG0580026148.01.T01:intron | 40.0% | |
| ACCTTATAAGTATGTGGAGG+AGG | + | Chr5:31396455-31396474 | MsG0580026148.01.T01:CDS | 40.0% | |
| ACTTGTGGTGTTTGAAGAAG+GGG | + | Chr5:31397398-31397417 | MsG0580026148.01.T01:CDS | 40.0% | |
| AGAACTAGCCCTTAAAGTGA+AGG | + | Chr5:31396428-31396447 | MsG0580026148.01.T01:CDS | 40.0% | |
| AGACATGGAAGAGATACTTG+TGG | + | Chr5:31397383-31397402 | MsG0580026148.01.T01:CDS | 40.0% | |
| AGCTAATAGGTTAAACCCAC+CGG | - | Chr5:31397083-31397102 | None:intergenic | 40.0% | |
| CAAAGTAGTTGGCCCAAAAA+CGG | - | Chr5:31396659-31396678 | None:intergenic | 40.0% | |
| CTTCCTTTATGCACGAGAAT+TGG | - | Chr5:31396537-31396556 | None:intergenic | 40.0% | |
| GAACTAGCCCTTAAAGTGAA+GGG | + | Chr5:31396429-31396448 | MsG0580026148.01.T01:CDS | 40.0% | |
| GTGAGGCAAACCAATTTAAG+TGG | - | Chr5:31397135-31397154 | None:intergenic | 40.0% | |
| GTGGGTTTAACCTATTAGCT+AGG | + | Chr5:31397083-31397102 | MsG0580026148.01.T01:intron | 40.0% | |
| GTGTTTCACCGTTGAAGAAT+TGG | - | Chr5:31397449-31397468 | None:intergenic | 40.0% | |
| TCCTCCTCCACATACTTATA+AGG | - | Chr5:31396459-31396478 | None:intergenic | 40.0% | |
| TTCTTCAACGGTGAAACACT+AGG | + | Chr5:31397450-31397469 | MsG0580026148.01.T01:CDS | 40.0% | |
| ! | AAAGGGCTAAAGTCCGTTTT+TGG | + | Chr5:31396643-31396662 | MsG0580026148.01.T01:CDS | 40.0% |
| ! | AAGTTGTGTTGTTGGGAAAC+TGG | + | Chr5:31396382-31396401 | MsG0580026148.01.T01:CDS | 40.0% |
| ! | AGTTGTGTTGTTGGGAAACT+GGG | + | Chr5:31396383-31396402 | MsG0580026148.01.T01:CDS | 40.0% |
| ! | ATTGGGACCTTTTTATGGAC+AGG | - | Chr5:31396519-31396538 | None:intergenic | 40.0% |
| ! | CACCTATGAAGCATTTCAAG+AGG | + | Chr5:31397506-31397525 | MsG0580026148.01.T01:CDS | 40.0% |
| ! | CGAGAATTGGGACCTTTTTA+TGG | - | Chr5:31396524-31396543 | None:intergenic | 40.0% |
| !! | AAGGGCTAAAGTCCGTTTTT+GGG | + | Chr5:31396644-31396663 | MsG0580026148.01.T01:CDS | 40.0% |
| AAGAACAAGGTGGATAGGGT+TGG | + | Chr5:31397167-31397186 | MsG0580026148.01.T01:intron | 45.0% | |
| ACCGCATATTCCAATCTCGA+GGG | + | Chr5:31397337-31397356 | MsG0580026148.01.T01:CDS | 45.0% | |
| ACTTCCTCCTCATGACAAGT+TGG | + | Chr5:31397620-31397639 | MsG0580026148.01.T01:CDS | 45.0% | |
| ATCCGTCGTACCTAGCTAAT+AGG | - | Chr5:31397096-31397115 | None:intergenic | 45.0% | |
| CGGACTTTAGCCCTTTGATA+AGG | - | Chr5:31396639-31396658 | None:intergenic | 45.0% | |
| GCCAGAGGATCCTTATCAAA+GGG | + | Chr5:31396626-31396645 | MsG0580026148.01.T01:CDS | 45.0% | |
| GCTAATAGGTTAAACCCACC+GGG | - | Chr5:31397082-31397101 | None:intergenic | 45.0% | |
| GGCCTCTTGAAATGCTTCAT+AGG | - | Chr5:31397511-31397530 | None:intergenic | 45.0% | |
| GTCCCAATTCTCGTGCATAA+AGG | + | Chr5:31396531-31396550 | MsG0580026148.01.T01:CDS | 45.0% | |
| TACCGCATATTCCAATCTCG+AGG | + | Chr5:31397336-31397355 | MsG0580026148.01.T01:CDS | 45.0% | |
| TGCCAGAGGATCCTTATCAA+AGG | + | Chr5:31396625-31396644 | MsG0580026148.01.T01:CDS | 45.0% | |
| TGGAATATGCGGTAGCTACT+AGG | - | Chr5:31397330-31397349 | None:intergenic | 45.0% | |
| TTCATAGGTGCAAGAAGTCG+CGG | - | Chr5:31397496-31397515 | None:intergenic | 45.0% | |
| ! | GAGGTAAAATAGGTTGAGCC+CGG | + | Chr5:31397061-31397080 | MsG0580026148.01.T01:intron | 45.0% |
| ! | TAAAATAGGTTGAGCCCGGT+GGG | + | Chr5:31397065-31397084 | MsG0580026148.01.T01:intron | 45.0% |
| !! | TAGCTAGGTACGACGGATTA+AGG | + | Chr5:31397098-31397117 | MsG0580026148.01.T01:intron | 45.0% |
| !!! | ATATATAATTTGTTTTTTTA+AGG | + | Chr5:31396782-31396801 | MsG0580026148.01.T01:intron | 5.0% |
| !!! | TATATAATTTGTTTTTTTAA+GGG | + | Chr5:31396783-31396802 | MsG0580026148.01.T01:intron | 5.0% |
| ACTAGGACTCCTCGACATTG+TGG | + | Chr5:31397467-31397486 | MsG0580026148.01.T01:CDS | 50.0% | |
| CACCAGAGGATGTTCCTTCA+GGG | - | Chr5:31397592-31397611 | None:intergenic | 50.0% | |
| CCCCTCGAGATTGGAATATG+CGG | - | Chr5:31397341-31397360 | None:intergenic | 50.0% | |
| CCGCATATTCCAATCTCGAG+GGG | + | Chr5:31397338-31397357 | MsG0580026148.01.T01:CDS | 50.0% | |
| CGTGAAGACCTCTACATCAC+AGG | - | Chr5:31397532-31397551 | None:intergenic | 50.0% | |
| GAAGGAACATCCTCTGGTGA+AGG | + | Chr5:31397593-31397612 | MsG0580026148.01.T01:CDS | 50.0% | |
| GATAAGGATCCTCTGGCAAG+AGG | - | Chr5:31396623-31396642 | None:intergenic | 50.0% | |
| GCCCTTTGATAAGGATCCTC+TGG | - | Chr5:31396630-31396649 | None:intergenic | 50.0% | |
| TATTCCCAACCTCTTGCCAG+AGG | + | Chr5:31396611-31396630 | MsG0580026148.01.T01:CDS | 50.0% | |
| TCAAGAGGCCTGTGATGTAG+AGG | + | Chr5:31397521-31397540 | MsG0580026148.01.T01:CDS | 50.0% | |
| TCACCAGAGGATGTTCCTTC+AGG | - | Chr5:31397593-31397612 | None:intergenic | 50.0% | |
| TTCTCTCTTCCCCTCGAGAT+TGG | - | Chr5:31397350-31397369 | None:intergenic | 50.0% | |
| TTGGCCACCAACTTGTCATG+AGG | - | Chr5:31397630-31397649 | None:intergenic | 50.0% | |
| ! | GTAAAATAGGTTGAGCCCGG+TGG | + | Chr5:31397064-31397083 | MsG0580026148.01.T01:intron | 50.0% |
| ! | TCCTCCTCATGACAAGTTGG+TGG | + | Chr5:31397623-31397642 | MsG0580026148.01.T01:CDS | 50.0% |
| !! | GGAAGTGTTTCCTTCACCAG+AGG | - | Chr5:31397606-31397625 | None:intergenic | 50.0% |
| AGGATCCTCTGGCAAGAGGT+TGG | - | Chr5:31396619-31396638 | None:intergenic | 55.0% | |
| CATGTGGGTGAATGCCCTGA+AGG | + | Chr5:31397575-31397594 | MsG0580026148.01.T01:CDS | 55.0% | |
| GCCACCAACTTGTCATGAGG+AGG | - | Chr5:31397627-31397646 | None:intergenic | 55.0% | |
| GGATCCTCTGGCAAGAGGTT+GGG | - | Chr5:31396618-31396637 | None:intergenic | 55.0% | |
| TGCCCTGAAGGAACATCCTC+TGG | + | Chr5:31397587-31397606 | MsG0580026148.01.T01:CDS | 55.0% | |
| !! | GGTGGATAGGGTTGGCTCAT+CGG | + | Chr5:31397175-31397194 | MsG0580026148.01.T01:intron | 55.0% |
| !! | GTGGATAGGGTTGGCTCATC+GGG | + | Chr5:31397176-31397195 | MsG0580026148.01.T01:intron | 55.0% |
| TCGCGGCTACCACAATGTCG+AGG | - | Chr5:31397479-31397498 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 31396363 | 31397674 | 31396363 | ID=MsG0580026148.01;Name=MsG0580026148.01 |
| Chr5 | mRNA | 31396363 | 31397674 | 31396363 | ID=MsG0580026148.01.T01;Parent=MsG0580026148.01;Name=MsG0580026148.01.T01;_AED=0.48;_eAED=0.49;_QI=0|0|0|1|1|1|2|0|225 |
| Chr5 | exon | 31396363 | 31396686 | 31396363 | ID=MsG0580026148.01.T01:exon:24866;Parent=MsG0580026148.01.T01 |
| Chr5 | exon | 31397321 | 31397674 | 31397321 | ID=MsG0580026148.01.T01:exon:24867;Parent=MsG0580026148.01.T01 |
| Chr5 | CDS | 31396363 | 31396686 | 31396363 | ID=MsG0580026148.01.T01:cds;Parent=MsG0580026148.01.T01 |
| Chr5 | CDS | 31397321 | 31397674 | 31397321 | ID=MsG0580026148.01.T01:cds;Parent=MsG0580026148.01.T01 |
| Gene Sequence |
| Protein sequence |
