Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038939.01.T01 | XP_003623208.1 | 96 | 225 | 9 | 0 | 1 | 225 | 1 | 225 | 1.80E-156 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038939.01.T01 | P32110 | 77.434 | 226 | 49 | 2 | 1 | 225 | 1 | 225 | 3.75E-126 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038939.01.T01 | G7L6I2 | 96.000 | 225 | 9 | 0 | 1 | 225 | 1 | 225 | 8.61e-157 | 442 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047831.01 | MsG0780038939.01 | 0.828135 | 1.063846e-54 | 1.048153e-51 |
| MsG0080048036.01 | MsG0780038939.01 | 0.860501 | 1.976216e-63 | 5.413746e-60 |
| MsG0080048345.01 | MsG0780038939.01 | 0.817805 | 2.725922e-52 | 2.005303e-49 |
| MsG0080048347.01 | MsG0780038939.01 | 0.875985 | 1.999468e-68 | 9.532813e-65 |
| MsG0080048348.01 | MsG0780038939.01 | 0.822679 | 2.081533e-53 | 1.754298e-50 |
| MsG0080048349.01 | MsG0780038939.01 | 0.829904 | 3.965329e-55 | 4.114301e-52 |
| MsG0080048350.01 | MsG0780038939.01 | 0.834604 | 2.722644e-56 | 3.247197e-53 |
| MsG0080048352.01 | MsG0780038939.01 | 0.865628 | 5.143511e-65 | 1.685084e-61 |
| MsG0080048889.01 | MsG0780038939.01 | 0.806410 | 8.337065e-50 | 4.521895e-47 |
| MsG0080049066.01 | MsG0780038939.01 | -0.813575 | 2.387553e-51 | 1.565027e-48 |
| MsG0180000234.01 | MsG0780038939.01 | 0.810299 | 1.234924e-50 | 7.416396e-48 |
| MsG0180000337.01 | MsG0780038939.01 | 0.833191 | 6.143997e-56 | 7.023814e-53 |
| MsG0180000583.01 | MsG0780038939.01 | 0.825521 | 4.479641e-54 | 4.092696e-51 |
| MsG0180001072.01 | MsG0780038939.01 | -0.807880 | 4.071532e-50 | 2.293956e-47 |
| MsG0180001463.01 | MsG0780038939.01 | 0.813106 | 3.027814e-51 | 1.959343e-48 |
| MsG0180001533.01 | MsG0780038939.01 | 0.828641 | 8.030877e-55 | 8.029584e-52 |
| MsG0180001691.01 | MsG0780038939.01 | 0.810886 | 9.221839e-51 | 5.626015e-48 |
| MsG0180002099.01 | MsG0780038939.01 | -0.819970 | 8.778585e-53 | 6.856822e-50 |
| MsG0180002214.01 | MsG0780038939.01 | -0.807954 | 3.927213e-50 | 2.217000e-47 |
| MsG0180002274.01 | MsG0780038939.01 | 0.932947 | 3.955400e-95 | 2.729384e-90 |
| MsG0180002425.01 | MsG0780038939.01 | -0.801978 | 6.976670e-49 | 3.377498e-46 |
| MsG0180002935.01 | MsG0780038939.01 | 0.818800 | 1.622174e-52 | 1.226428e-49 |
| MsG0180003235.01 | MsG0780038939.01 | 0.830015 | 3.724507e-55 | 3.876359e-52 |
| MsG0180003240.01 | MsG0780038939.01 | 0.813621 | 2.333331e-51 | 1.531364e-48 |
| MsG0180003248.01 | MsG0780038939.01 | 0.846306 | 2.359848e-59 | 4.044057e-56 |
| MsG0180003249.01 | MsG0780038939.01 | 0.835783 | 1.372589e-56 | 1.695870e-53 |
| MsG0180003250.01 | MsG0780038939.01 | 0.839807 | 1.270361e-57 | 1.774366e-54 |
| MsG0180003338.01 | MsG0780038939.01 | 0.858081 | 1.052158e-62 | 2.653472e-59 |
| MsG0180003350.01 | MsG0780038939.01 | -0.821609 | 3.685857e-53 | 3.012979e-50 |
| MsG0180003687.01 | MsG0780038939.01 | 0.804684 | 1.919350e-49 | 9.959379e-47 |
| MsG0180003757.01 | MsG0780038939.01 | -0.832069 | 1.166464e-55 | 1.289648e-52 |
| MsG0180004203.01 | MsG0780038939.01 | 0.849545 | 3.019009e-60 | 5.742247e-57 |
| MsG0180004301.01 | MsG0780038939.01 | -0.808039 | 3.766246e-50 | 2.130894e-47 |
| MsG0180004328.01 | MsG0780038939.01 | 0.834879 | 2.321615e-56 | 2.791644e-53 |
| MsG0180004502.01 | MsG0780038939.01 | -0.821188 | 4.610330e-53 | 3.725008e-50 |
| MsG0180004773.01 | MsG0780038939.01 | -0.843475 | 1.369599e-58 | 2.145347e-55 |
| MsG0180004941.01 | MsG0780038939.01 | 0.826465 | 2.672435e-54 | 2.508165e-51 |
| MsG0180004942.01 | MsG0780038939.01 | 0.844696 | 6.442423e-59 | 1.048539e-55 |
| MsG0180004957.01 | MsG0780038939.01 | -0.807113 | 5.922715e-50 | 3.270992e-47 |
| MsG0180005328.01 | MsG0780038939.01 | 0.815672 | 8.199526e-52 | 5.689702e-49 |
| MsG0180005356.01 | MsG0780038939.01 | 0.869266 | 3.521587e-66 | 1.313310e-62 |
| MsG0180005357.01 | MsG0780038939.01 | 0.843479 | 1.366328e-58 | 2.140454e-55 |
| MsG0180005358.01 | MsG0780038939.01 | 0.864801 | 9.360582e-65 | 2.976835e-61 |
| MsG0180005417.01 | MsG0780038939.01 | 0.824363 | 8.404877e-54 | 7.428652e-51 |
| MsG0180005542.01 | MsG0780038939.01 | 0.818671 | 1.735653e-52 | 1.307569e-49 |
| MsG0180005648.01 | MsG0780038939.01 | 0.853240 | 2.722587e-61 | 5.844133e-58 |
| MsG0180006212.01 | MsG0780038939.01 | -0.808705 | 2.715692e-50 | 1.563578e-47 |
| MsG0180006227.01 | MsG0780038939.01 | -0.812199 | 4.781515e-51 | 3.020731e-48 |
| MsG0280006381.01 | MsG0780038939.01 | -0.816039 | 6.790499e-52 | 4.759663e-49 |
| MsG0280006442.01 | MsG0780038939.01 | 0.813053 | 3.109437e-51 | 2.009385e-48 |
| MsG0280006452.01 | MsG0780038939.01 | -0.803294 | 3.734675e-49 | 1.869763e-46 |
| MsG0280010802.01 | MsG0780038939.01 | 0.857778 | 1.294494e-62 | 3.231256e-59 |
| MsG0280011042.01 | MsG0780038939.01 | 0.801083 | 1.064458e-48 | 5.038380e-46 |
| MsG0280011165.01 | MsG0780038939.01 | 0.857984 | 1.124260e-62 | 2.826146e-59 |
| MsG0280011193.01 | MsG0780038939.01 | 0.845783 | 3.273514e-59 | 5.517136e-56 |
| MsG0280011203.01 | MsG0780038939.01 | 0.847255 | 1.298410e-59 | 2.294400e-56 |
| MsG0280011236.01 | MsG0780038939.01 | 0.828959 | 6.725245e-55 | 6.786453e-52 |
| MsG0280011238.01 | MsG0780038939.01 | 0.858352 | 8.737769e-63 | 2.223527e-59 |
| MsG0280011267.01 | MsG0780038939.01 | 0.831096 | 2.025850e-55 | 2.176209e-52 |
| MsG0280011301.01 | MsG0780038939.01 | -0.819477 | 1.137785e-52 | 8.765510e-50 |
| MsG0380011613.01 | MsG0780038939.01 | 0.840817 | 6.919290e-58 | 9.972870e-55 |
| MsG0380011635.01 | MsG0780038939.01 | 0.840065 | 1.087884e-57 | 1.532043e-54 |
| MsG0380011974.01 | MsG0780038939.01 | 0.829927 | 3.913809e-55 | 4.063190e-52 |
| MsG0380012400.01 | MsG0780038939.01 | 0.807649 | 4.559031e-50 | 2.553181e-47 |
| MsG0380012654.01 | MsG0780038939.01 | 0.837295 | 5.655801e-57 | 7.313984e-54 |
| MsG0380013114.01 | MsG0780038939.01 | -0.832177 | 1.097093e-55 | 1.216754e-52 |
| MsG0380013272.01 | MsG0780038939.01 | 0.841176 | 5.567859e-58 | 8.114493e-55 |
| MsG0380013285.01 | MsG0780038939.01 | 0.813594 | 2.365231e-51 | 1.551185e-48 |
| MsG0380013300.01 | MsG0780038939.01 | 0.861934 | 7.233987e-64 | 2.081362e-60 |
| MsG0380013449.01 | MsG0780038939.01 | 0.844342 | 8.021241e-59 | 1.291065e-55 |
| MsG0380013452.01 | MsG0780038939.01 | 0.848654 | 5.339919e-60 | 9.868547e-57 |
| MsG0380013458.01 | MsG0780038939.01 | 0.814337 | 1.621761e-51 | 1.085225e-48 |
| MsG0380014639.01 | MsG0780038939.01 | -0.813067 | 3.087107e-51 | 1.995698e-48 |
| MsG0380014735.01 | MsG0780038939.01 | -0.802199 | 6.282588e-49 | 3.058711e-46 |
| MsG0680030960.01 | MsG0780038939.01 | 0.829988 | 3.782033e-55 | 3.933267e-52 |
| MsG0680031009.01 | MsG0780038939.01 | 0.824017 | 1.013442e-53 | 8.869339e-51 |
| MsG0680031813.01 | MsG0780038939.01 | -0.818478 | 1.919998e-52 | 1.438812e-49 |
| MsG0680034229.01 | MsG0780038939.01 | -0.824813 | 6.585034e-54 | 5.896554e-51 |
| MsG0680034255.01 | MsG0780038939.01 | 0.807464 | 4.991800e-50 | 2.782293e-47 |
| MsG0680034316.01 | MsG0780038939.01 | 0.828835 | 7.208002e-55 | 7.246927e-52 |
| MsG0680034317.01 | MsG0780038939.01 | 0.838078 | 3.559405e-57 | 4.715159e-54 |
| MsG0680035584.01 | MsG0780038939.01 | -0.804603 | 1.995761e-49 | 1.033404e-46 |
| MsG0480018628.01 | MsG0780038939.01 | -0.834213 | 3.412364e-56 | 4.022128e-53 |
| MsG0480019017.01 | MsG0780038939.01 | 0.805326 | 1.409120e-49 | 7.433566e-47 |
| MsG0480019217.01 | MsG0780038939.01 | 0.803490 | 3.400607e-49 | 1.711191e-46 |
| MsG0480019295.01 | MsG0780038939.01 | 0.808800 | 2.591509e-50 | 1.495805e-47 |
| MsG0480019726.01 | MsG0780038939.01 | 0.803524 | 3.346187e-49 | 1.685343e-46 |
| MsG0480020497.01 | MsG0780038939.01 | 0.821567 | 3.770734e-53 | 3.078793e-50 |
| MsG0480020958.01 | MsG0780038939.01 | 0.802271 | 6.073152e-49 | 2.962312e-46 |
| MsG0480021131.01 | MsG0780038939.01 | 0.803429 | 3.501617e-49 | 1.759220e-46 |
| MsG0480021327.01 | MsG0780038939.01 | -0.835972 | 1.228721e-56 | 1.526817e-53 |
| MsG0480021331.01 | MsG0780038939.01 | -0.827667 | 1.378598e-54 | 1.339723e-51 |
| MsG0480022125.01 | MsG0780038939.01 | 0.811391 | 7.167628e-51 | 4.431247e-48 |
| MsG0480022309.01 | MsG0780038939.01 | 0.806919 | 6.509739e-50 | 3.577257e-47 |
| MsG0480022310.01 | MsG0780038939.01 | 0.826054 | 3.348201e-54 | 3.105887e-51 |
| MsG0480022311.01 | MsG0780038939.01 | 0.801136 | 1.038033e-48 | 4.919888e-46 |
| MsG0480022400.01 | MsG0780038939.01 | 0.827578 | 1.448125e-54 | 1.403596e-51 |
| MsG0480022515.01 | MsG0780038939.01 | 0.801615 | 8.281725e-49 | 3.972623e-46 |
| MsG0480022655.01 | MsG0780038939.01 | 0.822913 | 1.836470e-53 | 1.558085e-50 |
| MsG0480022735.01 | MsG0780038939.01 | 0.816812 | 4.559671e-52 | 3.264091e-49 |
| MsG0480022736.01 | MsG0780038939.01 | 0.811519 | 6.724412e-51 | 4.171487e-48 |
| MsG0480023107.01 | MsG0780038939.01 | 0.854876 | 9.188080e-62 | 2.081992e-58 |
| MsG0480023152.01 | MsG0780038939.01 | -0.831043 | 2.087343e-55 | 2.238720e-52 |
| MsG0480023187.01 | MsG0780038939.01 | -0.820147 | 7.999492e-53 | 6.279186e-50 |
| MsG0480023267.01 | MsG0780038939.01 | 0.811990 | 5.310789e-51 | 3.335924e-48 |
| MsG0480023303.01 | MsG0780038939.01 | 0.806237 | 9.069865e-50 | 4.897917e-47 |
| MsG0480023349.01 | MsG0780038939.01 | 0.824008 | 1.018667e-53 | 8.912669e-51 |
| MsG0480023658.01 | MsG0780038939.01 | 0.820413 | 6.950288e-53 | 5.495985e-50 |
| MsG0480023695.01 | MsG0780038939.01 | -0.822901 | 1.848825e-53 | 1.567979e-50 |
| MsG0480023819.01 | MsG0780038939.01 | 0.819179 | 1.330257e-52 | 1.016320e-49 |
| MsG0480023921.01 | MsG0780038939.01 | 0.836793 | 7.597066e-57 | 9.677054e-54 |
| MsG0580024176.01 | MsG0780038939.01 | 0.847974 | 8.235217e-60 | 1.488816e-56 |
| MsG0580024217.01 | MsG0780038939.01 | 0.808070 | 3.709264e-50 | 2.100401e-47 |
| MsG0580024218.01 | MsG0780038939.01 | 0.863302 | 2.743389e-64 | 8.277880e-61 |
| MsG0580024219.01 | MsG0780038939.01 | 0.854435 | 1.233524e-61 | 2.754494e-58 |
| MsG0580024220.01 | MsG0780038939.01 | 0.820936 | 5.271460e-53 | 4.229313e-50 |
| MsG0580024260.01 | MsG0780038939.01 | 0.827474 | 1.534050e-54 | 1.482563e-51 |
| MsG0580024408.01 | MsG0780038939.01 | 0.854916 | 8.950291e-62 | 2.030696e-58 |
| MsG0580024493.01 | MsG0780038939.01 | -0.803929 | 2.756925e-49 | 1.403118e-46 |
| MsG0580024990.01 | MsG0780038939.01 | 0.809094 | 2.242642e-50 | 1.304683e-47 |
| MsG0580025682.01 | MsG0780038939.01 | 0.807102 | 5.956297e-50 | 3.288514e-47 |
| MsG0580025683.01 | MsG0780038939.01 | 0.802167 | 6.380303e-49 | 3.103863e-46 |
| MsG0580025870.01 | MsG0780038939.01 | 0.817079 | 3.972194e-52 | 2.864393e-49 |
| MsG0380015009.01 | MsG0780038939.01 | 0.823094 | 1.666361e-53 | 1.421005e-50 |
| MsG0380015010.01 | MsG0780038939.01 | 0.843807 | 1.116755e-58 | 1.767524e-55 |
| MsG0380015080.01 | MsG0780038939.01 | 0.811115 | 8.226060e-51 | 5.048785e-48 |
| MsG0380015110.01 | MsG0780038939.01 | 0.805409 | 1.353690e-49 | 7.156446e-47 |
| MsG0380015200.01 | MsG0780038939.01 | -0.807152 | 5.810924e-50 | 3.212619e-47 |
| MsG0380015201.01 | MsG0780038939.01 | -0.818552 | 1.846721e-52 | 1.386702e-49 |
| MsG0380015323.01 | MsG0780038939.01 | 0.809538 | 1.801330e-50 | 1.060433e-47 |
| MsG0380015369.01 | MsG0780038939.01 | 0.815575 | 8.618123e-52 | 5.964152e-49 |
| MsG0380015572.01 | MsG0780038939.01 | 0.825415 | 4.745952e-54 | 4.322880e-51 |
| MsG0380015752.01 | MsG0780038939.01 | -0.801849 | 7.413812e-49 | 3.577685e-46 |
| MsG0380016086.01 | MsG0780038939.01 | 0.806539 | 7.832762e-50 | 4.262424e-47 |
| MsG0380016261.01 | MsG0780038939.01 | 0.800373 | 1.486027e-48 | 6.908139e-46 |
| MsG0380016270.01 | MsG0780038939.01 | 0.806525 | 7.887113e-50 | 4.290349e-47 |
| MsG0380016476.01 | MsG0780038939.01 | 0.811206 | 7.861817e-51 | 4.836845e-48 |
| MsG0380016801.01 | MsG0780038939.01 | 0.824914 | 6.234476e-54 | 5.598764e-51 |
| MsG0380016839.01 | MsG0780038939.01 | 0.803549 | 3.306731e-49 | 1.666524e-46 |
| MsG0380016881.01 | MsG0780038939.01 | -0.807696 | 4.456344e-50 | 2.498706e-47 |
| MsG0380016934.01 | MsG0780038939.01 | -0.806787 | 6.942575e-50 | 3.802049e-47 |
| MsG0380016935.01 | MsG0780038939.01 | -0.836331 | 9.964071e-57 | 1.251797e-53 |
| MsG0380017115.01 | MsG0780038939.01 | 0.800518 | 1.388400e-48 | 6.477825e-46 |
| MsG0380017151.01 | MsG0780038939.01 | 0.856310 | 3.508590e-62 | 8.337740e-59 |
| MsG0380017405.01 | MsG0780038939.01 | -0.842659 | 2.259347e-58 | 3.449075e-55 |
| MsG0380017406.01 | MsG0780038939.01 | -0.805910 | 1.062407e-49 | 5.689440e-47 |
| MsG0380017690.01 | MsG0780038939.01 | 0.861255 | 1.166727e-63 | 3.280678e-60 |
| MsG0380017754.01 | MsG0780038939.01 | 0.841646 | 4.187647e-58 | 6.192997e-55 |
| MsG0380017812.01 | MsG0780038939.01 | -0.800592 | 1.340886e-48 | 6.267895e-46 |
| MsG0480018201.01 | MsG0780038939.01 | -0.828327 | 9.562680e-55 | 9.473698e-52 |
| MsG0480018202.01 | MsG0780038939.01 | -0.821517 | 3.871474e-53 | 3.156470e-50 |
| MsG0480018203.01 | MsG0780038939.01 | -0.820101 | 8.195768e-53 | 6.425378e-50 |
| MsG0580026162.01 | MsG0780038939.01 | 0.812507 | 4.095353e-51 | 2.608716e-48 |
| MsG0580026492.01 | MsG0780038939.01 | 0.806838 | 6.770730e-50 | 3.713042e-47 |
| MsG0580026925.01 | MsG0780038939.01 | 0.822352 | 2.480717e-53 | 2.071357e-50 |
| MsG0580027638.01 | MsG0780038939.01 | 0.846565 | 2.005747e-59 | 3.466457e-56 |
| MsG0580027646.01 | MsG0780038939.01 | 0.814503 | 1.490397e-51 | 1.001876e-48 |
| MsG0580028999.01 | MsG0780038939.01 | 0.814187 | 1.750765e-51 | 1.166774e-48 |
| MsG0580029296.01 | MsG0780038939.01 | 0.803920 | 2.768651e-49 | 1.408740e-46 |
| MsG0580029555.01 | MsG0780038939.01 | 0.800431 | 1.446098e-48 | 6.732371e-46 |
| MsG0580029626.01 | MsG0780038939.01 | 0.823192 | 1.581361e-53 | 1.352176e-50 |
| MsG0580029664.01 | MsG0780038939.01 | 0.801235 | 9.909396e-49 | 4.708272e-46 |
| MsG0580030133.01 | MsG0780038939.01 | 0.870696 | 1.200923e-66 | 4.714969e-63 |
| MsG0580030135.01 | MsG0780038939.01 | 0.858186 | 9.794676e-63 | 2.478750e-59 |
| MsG0580030145.01 | MsG0780038939.01 | 0.846048 | 2.774582e-59 | 4.715804e-56 |
| MsG0580030197.01 | MsG0780038939.01 | -0.810995 | 8.736592e-51 | 5.345723e-48 |
| MsG0580030237.01 | MsG0780038939.01 | -0.801521 | 8.658400e-49 | 4.143636e-46 |
| MsG0280006883.01 | MsG0780038939.01 | 0.817910 | 2.581266e-52 | 1.904231e-49 |
| MsG0280007216.01 | MsG0780038939.01 | 0.855449 | 6.261517e-62 | 1.446202e-58 |
| MsG0280007649.01 | MsG0780038939.01 | -0.814779 | 1.294872e-51 | 8.768558e-49 |
| MsG0280007650.01 | MsG0780038939.01 | -0.819946 | 8.889940e-53 | 6.938888e-50 |
| MsG0280007759.01 | MsG0780038939.01 | 0.817582 | 3.059595e-52 | 2.236955e-49 |
| MsG0280007911.01 | MsG0780038939.01 | 0.839861 | 1.229925e-57 | 1.720723e-54 |
| MsG0280008405.01 | MsG0780038939.01 | 0.879369 | 1.317777e-69 | 7.126861e-66 |
| MsG0280009167.01 | MsG0780038939.01 | 0.810848 | 9.400824e-51 | 5.729199e-48 |
| MsG0280009742.01 | MsG0780038939.01 | -0.816932 | 4.286328e-52 | 3.078607e-49 |
| MsG0280009864.01 | MsG0780038939.01 | -0.807622 | 4.619856e-50 | 2.585490e-47 |
| MsG0680035841.01 | MsG0780038939.01 | 0.839403 | 1.617609e-57 | 2.231665e-54 |
| MsG0780035953.01 | MsG0780038939.01 | 0.846134 | 2.628724e-59 | 4.479770e-56 |
| MsG0780035993.01 | MsG0780038939.01 | 0.829561 | 4.804522e-55 | 4.934742e-52 |
| MsG0780036513.01 | MsG0780038939.01 | 0.815491 | 8.998049e-52 | 6.213051e-49 |
| MsG0780036661.01 | MsG0780038939.01 | 0.866503 | 2.719759e-65 | 9.187369e-62 |
| MsG0780037182.01 | MsG0780038939.01 | 0.801706 | 7.933503e-49 | 3.814430e-46 |
| MsG0780038030.01 | MsG0780038939.01 | -0.816470 | 5.439672e-52 | 3.857702e-49 |
| MsG0780038047.01 | MsG0780038939.01 | -0.824623 | 7.300729e-54 | 6.502272e-51 |
| MsG0780038305.01 | MsG0780038939.01 | 0.809725 | 1.641504e-50 | 9.711979e-48 |
| MsG0780038622.01 | MsG0780038939.01 | 0.821008 | 5.072755e-53 | 4.078392e-50 |
| MsG0780038860.01 | MsG0780038939.01 | 0.863401 | 2.555325e-64 | 7.736550e-61 |
| MsG0780038922.01 | MsG0780038939.01 | 0.872453 | 3.144758e-67 | 1.316809e-63 |
| MsG0780038923.01 | MsG0780038939.01 | 0.819690 | 1.017538e-52 | 7.885263e-50 |
| MsG0780038924.01 | MsG0780038939.01 | 0.849880 | 2.433573e-60 | 4.680707e-57 |
| MsG0780038939.01 | MsG0780038963.01 | 0.818124 | 2.308189e-52 | 1.712894e-49 |
| MsG0780038939.01 | MsG0780039190.01 | 0.821938 | 3.093148e-53 | 2.552241e-50 |
| MsG0780038939.01 | MsG0780039576.01 | 0.868420 | 6.615883e-66 | 2.391278e-62 |
| MsG0780038939.01 | MsG0780039836.01 | -0.811330 | 7.388338e-51 | 4.560142e-48 |
| MsG0780038939.01 | MsG0780039838.01 | -0.800198 | 1.613187e-48 | 7.465540e-46 |
| MsG0780038939.01 | MsG0780039839.01 | -0.840734 | 7.273157e-58 | 1.045599e-54 |
| MsG0780038939.01 | MsG0780039968.01 | 0.849715 | 2.706808e-60 | 5.177563e-57 |
| MsG0780038939.01 | MsG0780039978.01 | 0.858905 | 5.976845e-63 | 1.549802e-59 |
| MsG0780038939.01 | MsG0780040181.01 | 0.820132 | 8.059417e-53 | 6.323921e-50 |
| MsG0780038939.01 | MsG0780040321.01 | -0.806505 | 7.960808e-50 | 4.328348e-47 |
| MsG0780038939.01 | MsG0780040805.01 | 0.837094 | 6.367316e-57 | 8.183728e-54 |
| MsG0780038939.01 | MsG0780040806.01 | 0.837052 | 6.525362e-57 | 8.376661e-54 |
| MsG0780038939.01 | MsG0780040977.01 | 0.800131 | 1.664568e-48 | 7.690505e-46 |
| MsG0780038939.01 | MsG0780041121.01 | -0.812377 | 4.370573e-51 | 2.774390e-48 |
| MsG0780038939.01 | MsG0780041198.01 | 0.808600 | 2.860268e-50 | 1.642320e-47 |
| MsG0780038939.01 | MsG0780041254.01 | -0.807722 | 4.399862e-50 | 2.468852e-47 |
| MsG0780038939.01 | MsG0780041316.01 | 0.865635 | 5.120352e-65 | 1.677941e-61 |
| MsG0780038939.01 | MsG0780041556.01 | 0.852650 | 4.017156e-61 | 8.451388e-58 |
| MsG0780038939.01 | MsG0780041620.01 | -0.829095 | 6.234374e-55 | 6.316731e-52 |
| MsG0780038939.01 | MsG0780041720.01 | -0.824477 | 7.902852e-54 | 7.007532e-51 |
| MsG0780038939.01 | MsG0780041783.01 | -0.831811 | 1.350672e-55 | 1.482217e-52 |
| MsG0780038939.01 | MsG0880041855.01 | -0.809365 | 1.961991e-50 | 1.149737e-47 |
| MsG0780038939.01 | MsG0880042591.01 | 0.804375 | 2.226589e-49 | 1.146197e-46 |
| MsG0780038939.01 | MsG0880042740.01 | 0.856824 | 2.476537e-62 | 5.985708e-59 |
| MsG0780038939.01 | MsG0880042810.01 | 0.806963 | 6.373896e-50 | 3.506505e-47 |
| MsG0780038939.01 | MsG0880042858.01 | -0.827278 | 1.709224e-54 | 1.642466e-51 |
| MsG0780038939.01 | MsG0880043364.01 | 0.846803 | 1.725948e-59 | 3.006155e-56 |
| MsG0780038939.01 | MsG0880043481.01 | 0.845003 | 5.325144e-59 | 8.751666e-56 |
| MsG0780038939.01 | MsG0880043828.01 | 0.856583 | 2.916320e-62 | 6.995176e-59 |
| MsG0780038939.01 | MsG0880045188.01 | -0.802220 | 6.219912e-49 | 3.029908e-46 |
| MsG0780038939.01 | MsG0880045369.01 | -0.820105 | 8.176743e-53 | 6.411364e-50 |
| MsG0780038939.01 | MsG0880045385.01 | -0.831806 | 1.354823e-55 | 1.486510e-52 |
| MsG0780038939.01 | MsG0880045413.01 | -0.807465 | 4.989366e-50 | 2.781028e-47 |
| MsG0780038939.01 | MsG0880045458.01 | 0.809356 | 1.970803e-50 | 1.154640e-47 |
| MsG0780038939.01 | MsG0880045677.01 | 0.887750 | 1.084115e-72 | 8.165150e-69 |
| MsG0780038939.01 | MsG0880045968.01 | -0.819252 | 1.280691e-52 | 9.804388e-50 |
| MsG0780038939.01 | MsG0880046219.01 | -0.816907 | 4.341097e-52 | 3.115766e-49 |
| MsG0780038939.01 | MsG0880046308.01 | 0.826492 | 2.632979e-54 | 2.472930e-51 |
| MsG0780038939.01 | MsG0880046341.01 | -0.823219 | 1.558331e-53 | 1.333476e-50 |
| MsG0780038939.01 | MsG0880046429.01 | 0.874414 | 6.884053e-68 | 3.096180e-64 |
| MsG0780038939.01 | MsG0880046469.01 | -0.840489 | 8.430803e-58 | 1.202859e-54 |
| MsG0780038939.01 | MsG0880046863.01 | 0.826390 | 2.785705e-54 | 2.608995e-51 |
| MsG0780038939.01 | MsG0880046996.01 | 0.835809 | 1.351481e-56 | 1.671063e-53 |
| MsG0780038939.01 | MsG0880047318.01 | -0.814938 | 1.193759e-51 | 8.118564e-49 |
| MsG0780038939.01 | MsG0880047424.01 | 0.820400 | 6.997429e-53 | 5.531190e-50 |
| MsG0780038939.01 | MsG0880047493.01 | 0.814681 | 1.361475e-51 | 9.195332e-49 |
| MsG0780038939.01 | MsG0880047665.01 | 0.818728 | 1.684289e-52 | 1.270870e-49 |
| MsG0780038939.01 | MsG0880047714.01 | 0.817710 | 2.862964e-52 | 2.100618e-49 |
| MsG0780038939.01 | MsG0880047747.01 | 0.811801 | 5.836674e-51 | 3.647707e-48 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038939.01.T01 | MTR_7g065720 | 96.000 | 225 | 9 | 0 | 1 | 225 | 1 | 225 | 2.18e-160 | 442 |
| MsG0780038939.01.T01 | MTR_7g065660 | 77.232 | 224 | 50 | 1 | 1 | 224 | 1 | 223 | 2.41e-128 | 361 |
| MsG0780038939.01.T01 | MTR_7g065740 | 75.000 | 224 | 56 | 0 | 1 | 224 | 1 | 224 | 4.09e-127 | 358 |
| MsG0780038939.01.T01 | MTR_7g065750 | 73.894 | 226 | 58 | 1 | 1 | 225 | 1 | 226 | 1.75e-123 | 349 |
| MsG0780038939.01.T01 | MTR_7g065640 | 72.321 | 224 | 43 | 2 | 1 | 224 | 1 | 205 | 4.02e-114 | 325 |
| MsG0780038939.01.T01 | MTR_7g065600 | 68.444 | 225 | 70 | 1 | 1 | 225 | 1 | 224 | 2.74e-113 | 323 |
| MsG0780038939.01.T01 | MTR_7g065590 | 67.556 | 225 | 72 | 1 | 1 | 225 | 1 | 224 | 1.61e-112 | 321 |
| MsG0780038939.01.T01 | MTR_7g065290 | 69.333 | 225 | 68 | 1 | 1 | 225 | 1 | 224 | 7.40e-112 | 320 |
| MsG0780038939.01.T01 | MTR_4g019790 | 64.732 | 224 | 78 | 1 | 1 | 224 | 1 | 223 | 1.37e-105 | 304 |
| MsG0780038939.01.T01 | MTR_7g065265 | 66.222 | 225 | 75 | 1 | 1 | 225 | 1 | 224 | 4.47e-105 | 303 |
| MsG0780038939.01.T01 | MTR_7g065270 | 65.333 | 225 | 77 | 1 | 1 | 225 | 1 | 224 | 9.90e-104 | 299 |
| MsG0780038939.01.T01 | MTR_7g065630 | 66.964 | 224 | 69 | 2 | 1 | 224 | 19 | 237 | 3.33e-103 | 298 |
| MsG0780038939.01.T01 | MTR_7g065230 | 64.444 | 225 | 74 | 2 | 1 | 225 | 1 | 219 | 2.01e-99 | 288 |
| MsG0780038939.01.T01 | MTR_7g065260 | 62.389 | 226 | 83 | 2 | 1 | 225 | 8 | 232 | 6.78e-98 | 285 |
| MsG0780038939.01.T01 | MTR_4g019780 | 62.385 | 218 | 78 | 3 | 1 | 216 | 1 | 216 | 3.71e-96 | 280 |
| MsG0780038939.01.T01 | MTR_7g065710 | 65.385 | 208 | 67 | 2 | 8 | 215 | 5 | 207 | 5.22e-96 | 280 |
| MsG0780038939.01.T01 | MTR_7g065680 | 65.022 | 223 | 73 | 2 | 1 | 223 | 1 | 218 | 2.32e-90 | 265 |
| MsG0780038939.01.T01 | MTR_7g065700 | 65.581 | 215 | 69 | 2 | 1 | 215 | 1 | 210 | 2.76e-88 | 260 |
| MsG0780038939.01.T01 | MTR_8g087425 | 44.749 | 219 | 118 | 2 | 4 | 221 | 2 | 218 | 1.65e-67 | 207 |
| MsG0780038939.01.T01 | MTR_6g080440 | 46.411 | 209 | 109 | 2 | 7 | 214 | 3 | 209 | 4.71e-65 | 201 |
| MsG0780038939.01.T01 | MTR_3g099757 | 45.249 | 221 | 118 | 2 | 5 | 224 | 3 | 221 | 7.69e-65 | 200 |
| MsG0780038939.01.T01 | MTR_8g087410 | 46.262 | 214 | 111 | 3 | 1 | 213 | 1 | 211 | 7.07e-64 | 198 |
| MsG0780038939.01.T01 | MTR_1g090150 | 44.700 | 217 | 106 | 4 | 6 | 215 | 2 | 211 | 1.42e-62 | 195 |
| MsG0780038939.01.T01 | MTR_1g115195 | 45.024 | 211 | 114 | 1 | 7 | 215 | 3 | 213 | 9.77e-61 | 190 |
| MsG0780038939.01.T01 | MTR_1g090070 | 44.144 | 222 | 118 | 3 | 7 | 224 | 9 | 228 | 3.64e-59 | 186 |
| MsG0780038939.01.T01 | MTR_4g059730 | 45.327 | 214 | 112 | 2 | 6 | 216 | 3 | 214 | 4.74e-57 | 180 |
| MsG0780038939.01.T01 | MTR_1g090060 | 44.595 | 222 | 118 | 3 | 7 | 225 | 3 | 222 | 3.48e-56 | 178 |
| MsG0780038939.01.T01 | MTR_1g090090 | 45.714 | 210 | 109 | 2 | 7 | 213 | 3 | 210 | 5.08e-55 | 176 |
| MsG0780038939.01.T01 | MTR_5g037380 | 44.344 | 221 | 112 | 4 | 1 | 213 | 1 | 218 | 3.33e-54 | 173 |
| MsG0780038939.01.T01 | MTR_1g090100 | 44.091 | 220 | 118 | 3 | 8 | 224 | 3 | 220 | 5.84e-54 | 172 |
| MsG0780038939.01.T01 | MTR_5g040430 | 39.462 | 223 | 126 | 3 | 1 | 216 | 1 | 221 | 2.93e-52 | 168 |
| MsG0780038939.01.T01 | MTR_8g061950 | 43.182 | 220 | 116 | 4 | 5 | 216 | 3 | 221 | 2.72e-51 | 166 |
| MsG0780038939.01.T01 | MTR_2g070150 | 42.718 | 206 | 110 | 5 | 6 | 208 | 3 | 203 | 1.80e-48 | 158 |
| MsG0780038939.01.T01 | MTR_2g070200 | 42.439 | 205 | 113 | 4 | 6 | 208 | 3 | 204 | 3.56e-48 | 158 |
| MsG0780038939.01.T01 | MTR_2g070130 | 42.584 | 209 | 106 | 5 | 6 | 208 | 3 | 203 | 7.33e-48 | 157 |
| MsG0780038939.01.T01 | MTR_3g467420 | 41.827 | 208 | 115 | 5 | 8 | 213 | 10 | 213 | 2.73e-46 | 153 |
| MsG0780038939.01.T01 | MTR_2g070140 | 41.837 | 196 | 106 | 6 | 21 | 213 | 2 | 192 | 3.73e-46 | 152 |
| MsG0780038939.01.T01 | MTR_2g070120 | 41.546 | 207 | 115 | 5 | 6 | 210 | 3 | 205 | 1.09e-45 | 151 |
| MsG0780038939.01.T01 | MTR_2g070180 | 40.000 | 205 | 117 | 4 | 6 | 208 | 3 | 203 | 2.66e-45 | 150 |
| MsG0780038939.01.T01 | MTR_8g056940 | 40.183 | 219 | 124 | 5 | 6 | 222 | 3 | 216 | 4.10e-44 | 147 |
| MsG0780038939.01.T01 | MTR_3g467430 | 39.623 | 212 | 122 | 5 | 4 | 213 | 6 | 213 | 4.62e-44 | 147 |
| MsG0780038939.01.T01 | MTR_2g070210 | 39.623 | 212 | 120 | 6 | 6 | 213 | 3 | 210 | 2.12e-43 | 145 |
| MsG0780038939.01.T01 | MTR_4g124130 | 39.091 | 220 | 127 | 5 | 5 | 221 | 2 | 217 | 7.29e-43 | 144 |
| MsG0780038939.01.T01 | MTR_2g070070 | 36.866 | 217 | 131 | 4 | 7 | 221 | 4 | 216 | 1.56e-40 | 138 |
| MsG0780038939.01.T01 | MTR_5g076900 | 37.089 | 213 | 128 | 5 | 3 | 213 | 2 | 210 | 3.46e-40 | 137 |
| MsG0780038939.01.T01 | MTR_2g070060 | 35.849 | 212 | 124 | 5 | 7 | 213 | 4 | 208 | 1.65e-39 | 135 |
| MsG0780038939.01.T01 | MTR_2g070110 | 37.799 | 209 | 123 | 4 | 7 | 213 | 4 | 207 | 4.95e-37 | 129 |
| MsG0780038939.01.T01 | MTR_0186s0030 | 48.936 | 141 | 69 | 2 | 6 | 145 | 3 | 141 | 2.45e-36 | 125 |
| MsG0780038939.01.T01 | MTR_2g072120 | 49.153 | 59 | 29 | 1 | 51 | 108 | 2 | 60 | 9.69e-15 | 67.4 |
| MsG0780038939.01.T01 | MTR_5g037390 | 46.575 | 73 | 36 | 1 | 31 | 100 | 11 | 83 | 1.54e-13 | 64.7 |
| MsG0780038939.01.T01 | MTR_4g134380 | 25.728 | 206 | 124 | 7 | 21 | 209 | 29 | 222 | 1.15e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038939.01.T01 | AT3G09270 | 51.111 | 225 | 104 | 5 | 4 | 224 | 2 | 224 | 4.53e-76 | 229 |
| MsG0780038939.01.T01 | AT2G29420 | 49.545 | 220 | 108 | 2 | 3 | 221 | 5 | 222 | 4.34e-75 | 227 |
| MsG0780038939.01.T01 | AT2G29490 | 47.619 | 210 | 106 | 3 | 1 | 208 | 1 | 208 | 1.61e-60 | 189 |
| MsG0780038939.01.T01 | AT2G29480 | 44.762 | 210 | 112 | 3 | 1 | 208 | 1 | 208 | 4.06e-55 | 176 |
| MsG0780038939.01.T01 | AT1G10370 | 44.712 | 208 | 107 | 3 | 5 | 205 | 3 | 209 | 1.33e-54 | 174 |
| MsG0780038939.01.T01 | AT2G29450 | 46.154 | 208 | 109 | 3 | 3 | 208 | 2 | 208 | 1.82e-54 | 174 |
| MsG0780038939.01.T01 | AT2G29460 | 42.601 | 223 | 124 | 3 | 1 | 221 | 1 | 221 | 1.82e-54 | 174 |
| MsG0780038939.01.T01 | AT2G29470 | 42.654 | 211 | 116 | 4 | 1 | 208 | 1 | 209 | 2.65e-53 | 171 |
| MsG0780038939.01.T01 | AT2G29440 | 45.238 | 210 | 110 | 4 | 1 | 208 | 1 | 207 | 3.31e-53 | 171 |
| MsG0780038939.01.T01 | AT1G27130 | 41.593 | 226 | 122 | 5 | 1 | 218 | 1 | 224 | 6.99e-53 | 170 |
| MsG0780038939.01.T01 | AT1G10360 | 42.453 | 212 | 112 | 4 | 1 | 205 | 1 | 209 | 4.97e-52 | 168 |
| MsG0780038939.01.T01 | AT1G59700 | 45.933 | 209 | 104 | 5 | 5 | 205 | 4 | 211 | 1.01e-51 | 167 |
| MsG0780038939.01.T01 | AT1G59670 | 43.541 | 209 | 109 | 4 | 5 | 205 | 4 | 211 | 8.61e-51 | 165 |
| MsG0780038939.01.T01 | AT1G78340 | 43.333 | 210 | 113 | 4 | 6 | 213 | 3 | 208 | 1.15e-50 | 164 |
| MsG0780038939.01.T01 | AT1G69930 | 39.556 | 225 | 129 | 3 | 2 | 220 | 7 | 230 | 5.41e-50 | 163 |
| MsG0780038939.01.T01 | AT1G78370 | 40.777 | 206 | 116 | 4 | 10 | 213 | 7 | 208 | 4.39e-49 | 160 |
| MsG0780038939.01.T01 | AT1G78380 | 43.781 | 201 | 107 | 4 | 7 | 205 | 4 | 200 | 1.09e-48 | 159 |
| MsG0780038939.01.T01 | AT1G78320 | 41.395 | 215 | 120 | 5 | 5 | 217 | 2 | 212 | 1.65e-48 | 159 |
| MsG0780038939.01.T01 | AT1G17170 | 40.367 | 218 | 123 | 4 | 6 | 221 | 3 | 215 | 3.51e-47 | 155 |
| MsG0780038939.01.T01 | AT1G69920 | 40.000 | 215 | 118 | 5 | 1 | 205 | 26 | 239 | 3.79e-47 | 156 |
| MsG0780038939.01.T01 | AT1G53680 | 38.498 | 213 | 127 | 3 | 1 | 211 | 1 | 211 | 7.89e-47 | 154 |
| MsG0780038939.01.T01 | AT1G27140 | 39.394 | 231 | 129 | 5 | 1 | 222 | 1 | 229 | 1.15e-46 | 155 |
| MsG0780038939.01.T01 | AT1G17180 | 40.476 | 210 | 119 | 5 | 6 | 213 | 3 | 208 | 9.19e-45 | 149 |
| MsG0780038939.01.T01 | AT5G62480 | 38.739 | 222 | 124 | 4 | 5 | 216 | 6 | 225 | 1.19e-44 | 149 |
| MsG0780038939.01.T01 | AT1G78360 | 40.476 | 210 | 118 | 5 | 7 | 213 | 4 | 209 | 5.68e-42 | 142 |
| MsG0780038939.01.T01 | AT3G43800 | 38.462 | 208 | 118 | 6 | 4 | 205 | 2 | 205 | 2.36e-39 | 135 |
| MsG0780038939.01.T01 | AT1G74590 | 33.333 | 228 | 144 | 4 | 1 | 222 | 1 | 226 | 7.49e-39 | 134 |
| MsG0780038939.01.T01 | AT1G17190 | 37.674 | 215 | 126 | 5 | 1 | 213 | 1 | 209 | 6.66e-38 | 131 |
| MsG0780038939.01.T01 | AT1G78320 | 34.112 | 214 | 110 | 5 | 5 | 217 | 2 | 185 | 9.78e-32 | 115 |
| MsG0780038939.01.T01 | AT5G62480 | 30.317 | 221 | 118 | 4 | 5 | 216 | 6 | 199 | 3.25e-27 | 103 |
| MsG0780038939.01.T01 | AT5G62480 | 29.864 | 221 | 118 | 4 | 5 | 216 | 6 | 198 | 1.79e-26 | 102 |
| MsG0780038939.01.T01 | AT2G02380 | 25.339 | 221 | 137 | 7 | 5 | 209 | 9 | 217 | 1.70e-12 | 64.7 |
Find 44 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGCTCCACTTGGAAAGTT+TGG | 0.246363 | 7:+55568665 | None:intergenic |
| TGAATTTCTTGAAGAAAATA+TGG | 0.253055 | 7:-55569330 | MsG0780038939.01.T01:CDS |
| AAAGAGCCTTGGCTCGATTT+TGG | 0.290434 | 7:-55569151 | MsG0780038939.01.T01:CDS |
| TGGCTCCACTTGGAAAGTTT+GGG | 0.342035 | 7:+55568666 | None:intergenic |
| GAGTTGAAGGACAAGTTCTT+TGG | 0.346997 | 7:-55568795 | MsG0780038939.01.T01:CDS |
| TCTCAACCATCCTGTTGTTA+AGG | 0.349145 | 7:-55568637 | MsG0780038939.01.T01:CDS |
| ATCTGTACCCTGCACACAAA+TGG | 0.352526 | 7:+55569380 | None:intergenic |
| CAGGATGGTTGAGAAATTCT+TGG | 0.366483 | 7:+55568646 | None:intergenic |
| AAAATCGAGCCAAGGCTCTT+TGG | 0.372026 | 7:+55569153 | None:intergenic |
| CCTTTGATTCAAGACATAAC+AGG | 0.388085 | 7:-55568717 | MsG0780038939.01.T01:CDS |
| TTCTTTGGAGGAGAGGAGAT+TGG | 0.390435 | 7:-55568780 | MsG0780038939.01.T01:CDS |
| GTGAAGCTATTGGGAGCTAT+AGG | 0.394371 | 7:-55569407 | MsG0780038939.01.T01:CDS |
| TATGGTTCAGAAGGCAAGAT+TGG | 0.395087 | 7:+55569176 | None:intergenic |
| CAAGAAGAAGTGAAGCTATT+GGG | 0.403464 | 7:-55569416 | MsG0780038939.01.T01:CDS |
| TCAAGAAGAAGTGAAGCTAT+TGG | 0.415262 | 7:-55569417 | MsG0780038939.01.T01:CDS |
| AGGAGAGGAGATTGGAATTG+TGG | 0.454908 | 7:-55568772 | MsG0780038939.01.T01:CDS |
| GAGAAATTCTTGGCTCCACT+TGG | 0.459712 | 7:+55568656 | None:intergenic |
| GATTCTTGAGAATGAGTTGA+AGG | 0.463010 | 7:-55568808 | MsG0780038939.01.T01:CDS |
| TCTGTACCCTGCACACAAAT+GGG | 0.464539 | 7:+55569381 | None:intergenic |
| ATCACAAGGGACTCTGATAT+AGG | 0.465216 | 7:+55569233 | None:intergenic |
| TAGGAAGCCCATTTGTGTGC+AGG | 0.488142 | 7:-55569388 | MsG0780038939.01.T01:CDS |
| CGAGCCAAGGCTCTTTGGTA+TGG | 0.488300 | 7:+55569158 | None:intergenic |
| TTGAGTATATTGATGAGACT+TGG | 0.497242 | 7:-55569208 | MsG0780038939.01.T01:CDS |
| CCTGTTATGTCTTGAATCAA+AGG | 0.497589 | 7:+55568717 | None:intergenic |
| TTGAAGGACAAGTTCTTTGG+AGG | 0.501934 | 7:-55568792 | MsG0780038939.01.T01:CDS |
| GAGCGCGAGAAGAATATTGA+AGG | 0.504203 | 7:-55568849 | MsG0780038939.01.T01:CDS |
| ACAGATTGTTCTCAAGTTGA+AGG | 0.510826 | 7:-55569363 | MsG0780038939.01.T01:CDS |
| TATAAACTGGGTTATACTTG+AGG | 0.528468 | 7:+55569288 | None:intergenic |
| GGACAAGTTCTTTGGAGGAG+AGG | 0.532885 | 7:-55568787 | MsG0780038939.01.T01:CDS |
| CTTTCTCATCATCAACGGTA+TGG | 0.537106 | 7:+55568871 | None:intergenic |
| GAATATTGAAGGAACGATTG+AGG | 0.540020 | 7:-55568838 | MsG0780038939.01.T01:CDS |
| CTTTGATTCAAGACATAACA+GGG | 0.541148 | 7:-55568716 | MsG0780038939.01.T01:CDS |
| CTGTTATGTCTTGAATCAAA+GGG | 0.548966 | 7:+55568718 | None:intergenic |
| GCTCTTTGGTATGGTTCAGA+AGG | 0.555780 | 7:+55569167 | None:intergenic |
| CAATATACTCAATAATCACA+AGG | 0.568482 | 7:+55569219 | None:intergenic |
| CAGATTGTTCTCAAGTTGAA+GGG | 0.572339 | 7:-55569362 | MsG0780038939.01.T01:CDS |
| CTCATAGTGAGCTTTGAAGT+AGG | 0.574735 | 7:+55568584 | None:intergenic |
| AGGAAGCCCATTTGTGTGCA+GGG | 0.580217 | 7:-55569387 | MsG0780038939.01.T01:CDS |
| TGAACCATACCAAAGAGCCT+TGG | 0.593546 | 7:-55569162 | MsG0780038939.01.T01:CDS |
| GTCTAACTTCATCGACGACA+AGG | 0.594451 | 7:-55569129 | MsG0780038939.01.T01:intron |
| GTTAGACCAAAATCGAGCCA+AGG | 0.638172 | 7:+55569145 | None:intergenic |
| GCGCTCTTTCTCATCATCAA+CGG | 0.643070 | 7:+55568866 | None:intergenic |
| AGTGTCCCAAACTTTCCAAG+TGG | 0.647650 | 7:-55568671 | MsG0780038939.01.T01:CDS |
| AATATACTCAATAATCACAA+GGG | 0.685010 | 7:+55569220 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTACTAACAAATTTTTGAAA+TGG | - | Chr7:55569067-55569086 | MsG0780038939.01.T01:intron | 15.0% |
| !! | AATATACTCAATAATCACAA+GGG | + | Chr7:55568774-55568793 | None:intergenic | 20.0% |
| !! | TGAATTTCTTGAAGAAAATA+TGG | - | Chr7:55568661-55568680 | MsG0780038939.01.T01:CDS | 20.0% |
| !!! | TTTTCATTATGAACAAAAAC+TGG | + | Chr7:55568737-55568756 | None:intergenic | 20.0% |
| ! | AAAGTTTATCTTTGATGTCA+CGG | - | Chr7:55569010-55569029 | MsG0780038939.01.T01:intron | 25.0% |
| ! | ATTACATCATATGTGATTGA+TGG | - | Chr7:55568942-55568961 | MsG0780038939.01.T01:intron | 25.0% |
| ! | ATTTACATTAGAAAAGTCTG+CGG | + | Chr7:55569048-55569067 | None:intergenic | 25.0% |
| ! | CAATATACTCAATAATCACA+AGG | + | Chr7:55568775-55568794 | None:intergenic | 25.0% |
| !! | ACTGGAATCTTTTTATAAAC+TGG | + | Chr7:55568719-55568738 | None:intergenic | 25.0% |
| !! | CTGGAATCTTTTTATAAACT+GGG | + | Chr7:55568718-55568737 | None:intergenic | 25.0% |
| CTGTTATGTCTTGAATCAAA+GGG | + | Chr7:55569276-55569295 | None:intergenic | 30.0% | |
| CTTTGATTCAAGACATAACA+GGG | - | Chr7:55569275-55569294 | MsG0780038939.01.T01:CDS | 30.0% | |
| TATAAACTGGGTTATACTTG+AGG | + | Chr7:55568706-55568725 | None:intergenic | 30.0% | |
| TTGAGTATATTGATGAGACT+TGG | - | Chr7:55568783-55568802 | MsG0780038939.01.T01:CDS | 30.0% | |
| TTTATGTTTGTGCAGTGTAA+TGG | + | Chr7:55568990-55569009 | None:intergenic | 30.0% | |
| ! | TATTTTCCTTAACAACAGGA+TGG | + | Chr7:55569363-55569382 | None:intergenic | 30.0% |
| CAAGAAGAAGTGAAGCTATT+GGG | - | Chr7:55568575-55568594 | MsG0780038939.01.T01:CDS | 35.0% | |
| CCTGTTATGTCTTGAATCAA+AGG | + | Chr7:55569277-55569296 | None:intergenic | 35.0% | |
| CCTTTGATTCAAGACATAAC+AGG | - | Chr7:55569274-55569293 | MsG0780038939.01.T01:CDS | 35.0% | |
| GAATATTGAAGGAACGATTG+AGG | - | Chr7:55569153-55569172 | MsG0780038939.01.T01:CDS | 35.0% | |
| TCAAGAAGAAGTGAAGCTAT+TGG | - | Chr7:55568574-55568593 | MsG0780038939.01.T01:CDS | 35.0% | |
| ! | GATTCTTGAGAATGAGTTGA+AGG | - | Chr7:55569183-55569202 | MsG0780038939.01.T01:CDS | 35.0% |
| ! | GGCATATTTTCCTTAACAAC+AGG | + | Chr7:55569367-55569386 | None:intergenic | 35.0% |
| !! | ACAGATTGTTCTCAAGTTGA+AGG | - | Chr7:55568628-55568647 | MsG0780038939.01.T01:CDS | 35.0% |
| !! | CAGATTGTTCTCAAGTTGAA+GGG | - | Chr7:55568629-55568648 | MsG0780038939.01.T01:CDS | 35.0% |
| ATCACAAGGGACTCTGATAT+AGG | + | Chr7:55568761-55568780 | None:intergenic | 40.0% | |
| CAGGATGGTTGAGAAATTCT+TGG | + | Chr7:55569348-55569367 | None:intergenic | 40.0% | |
| CTTTCTCATCATCAACGGTA+TGG | + | Chr7:55569123-55569142 | None:intergenic | 40.0% | |
| GAGTTGAAGGACAAGTTCTT+TGG | - | Chr7:55569196-55569215 | MsG0780038939.01.T01:CDS | 40.0% | |
| TAGGCAAAAAGAGGTTCTCT+AGG | + | Chr7:55569391-55569410 | None:intergenic | 40.0% | |
| TATGGTTCAGAAGGCAAGAT+TGG | + | Chr7:55568818-55568837 | None:intergenic | 40.0% | |
| TCTCAACCATCCTGTTGTTA+AGG | - | Chr7:55569354-55569373 | MsG0780038939.01.T01:CDS | 40.0% | |
| TTGAAGGACAAGTTCTTTGG+AGG | - | Chr7:55569199-55569218 | MsG0780038939.01.T01:CDS | 40.0% | |
| ! | CAGCTGTGTACATAGCTTTT+TGG | - | Chr7:55569248-55569267 | MsG0780038939.01.T01:CDS | 40.0% |
| !! | CTCATAGTGAGCTTTGAAGT+AGG | + | Chr7:55569410-55569429 | None:intergenic | 40.0% |
| !! | GAGGAGAAGTTCACTTTTGT+TGG | + | Chr7:55568687-55568706 | None:intergenic | 40.0% |
| !! | GCTTTGAAGTAGGCAAAAAG+AGG | + | Chr7:55569400-55569419 | None:intergenic | 40.0% |
| AAAATCGAGCCAAGGCTCTT+TGG | + | Chr7:55568841-55568860 | None:intergenic | 45.0% | |
| AGGAGAGGAGATTGGAATTG+TGG | - | Chr7:55569219-55569238 | MsG0780038939.01.T01:CDS | 45.0% | |
| AGTGTCCCAAACTTTCCAAG+TGG | - | Chr7:55569320-55569339 | MsG0780038939.01.T01:CDS | 45.0% | |
| ATCTGTACCCTGCACACAAA+TGG | + | Chr7:55568614-55568633 | None:intergenic | 45.0% | |
| ATTAGAAAAGTCTGCGGCTG+CGG | + | Chr7:55569042-55569061 | None:intergenic | 45.0% | |
| GAGAAATTCTTGGCTCCACT+TGG | + | Chr7:55569338-55569357 | None:intergenic | 45.0% | |
| GAGCGCGAGAAGAATATTGA+AGG | - | Chr7:55569142-55569161 | MsG0780038939.01.T01:CDS | 45.0% | |
| GCAAAAAGAGGTTCTCTAGG+AGG | + | Chr7:55569388-55569407 | None:intergenic | 45.0% | |
| GCGCTCTTTCTCATCATCAA+CGG | + | Chr7:55569128-55569147 | None:intergenic | 45.0% | |
| GCTCTTTGGTATGGTTCAGA+AGG | + | Chr7:55568827-55568846 | None:intergenic | 45.0% | |
| GTCTAACTTCATCGACGACA+AGG | - | Chr7:55568862-55568881 | MsG0780038939.01.T01:CDS | 45.0% | |
| GTGAAGCTATTGGGAGCTAT+AGG | - | Chr7:55568584-55568603 | MsG0780038939.01.T01:CDS | 45.0% | |
| GTTAGACCAAAATCGAGCCA+AGG | + | Chr7:55568849-55568868 | None:intergenic | 45.0% | |
| TCTGTACCCTGCACACAAAT+GGG | + | Chr7:55568613-55568632 | None:intergenic | 45.0% | |
| TGAACCATACCAAAGAGCCT+TGG | - | Chr7:55568829-55568848 | MsG0780038939.01.T01:CDS | 45.0% | |
| TGGCTCCACTTGGAAAGTTT+GGG | + | Chr7:55569328-55569347 | None:intergenic | 45.0% | |
| TTGGCTCCACTTGGAAAGTT+TGG | + | Chr7:55569329-55569348 | None:intergenic | 45.0% | |
| ! | TTCTTTGGAGGAGAGGAGAT+TGG | - | Chr7:55569211-55569230 | MsG0780038939.01.T01:CDS | 45.0% |
| !! | AAAGAGCCTTGGCTCGATTT+TGG | - | Chr7:55568840-55568859 | MsG0780038939.01.T01:CDS | 45.0% |
| AGGAAGCCCATTTGTGTGCA+GGG | - | Chr7:55568604-55568623 | MsG0780038939.01.T01:CDS | 50.0% | |
| TAGGAAGCCCATTTGTGTGC+AGG | - | Chr7:55568603-55568622 | MsG0780038939.01.T01:CDS | 50.0% | |
| ! | GGACAAGTTCTTTGGAGGAG+AGG | - | Chr7:55569204-55569223 | MsG0780038939.01.T01:CDS | 50.0% |
| AAAAGTCTGCGGCTGCGGTT+TGG | + | Chr7:55569037-55569056 | None:intergenic | 55.0% | |
| AAAGTCTGCGGCTGCGGTTT+GGG | + | Chr7:55569036-55569055 | None:intergenic | 55.0% | |
| CGAGCCAAGGCTCTTTGGTA+TGG | + | Chr7:55568836-55568855 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 55568563 | 55569450 | 55568563 | ID=MsG0780038939.01;Name=MsG0780038939.01 |
| Chr7 | mRNA | 55568563 | 55569450 | 55568563 | ID=MsG0780038939.01.T01;Parent=MsG0780038939.01;Name=MsG0780038939.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|1|1|2|0|225 |
| Chr7 | exon | 55569130 | 55569450 | 55569130 | ID=MsG0780038939.01.T01:exon:7790;Parent=MsG0780038939.01.T01 |
| Chr7 | exon | 55568563 | 55568919 | 55568563 | ID=MsG0780038939.01.T01:exon:7789;Parent=MsG0780038939.01.T01 |
| Chr7 | CDS | 55569130 | 55569450 | 55569130 | ID=MsG0780038939.01.T01:cds;Parent=MsG0780038939.01.T01 |
| Chr7 | CDS | 55568563 | 55568919 | 55568563 | ID=MsG0780038939.01.T01:cds;Parent=MsG0780038939.01.T01 |
| Gene Sequence |
| Protein sequence |
