Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029360 | Msa0051960 | 0.816718 | 4.787020e-52 | -8.615850e-47 |
| Msa0029360 | Msa0101960 | 0.809941 | 1.474926e-50 | -8.615850e-47 |
| Msa0029360 | Msa0124930 | 0.826215 | 3.065085e-54 | -8.615850e-47 |
| Msa0029360 | Msa0138680 | -0.809929 | 1.484206e-50 | -8.615850e-47 |
| Msa0029360 | Msa0203090 | 0.815940 | 7.145088e-52 | -8.615850e-47 |
| Msa0029360 | Msa0211590 | -0.802805 | 4.712268e-49 | -8.615850e-47 |
| Msa0029360 | Msa0237690 | -0.805610 | 1.228468e-49 | -8.615850e-47 |
| Msa0029360 | Msa0380270 | -0.807773 | 4.290761e-50 | -8.615850e-47 |
| Msa0029360 | Msa0480090 | -0.819312 | 1.240617e-52 | -8.615850e-47 |
| Msa0029360 | Msa0524470 | -0.816973 | 4.194406e-52 | -8.615850e-47 |
| Msa0029360 | Msa0567480 | 0.808700 | 2.722647e-50 | -8.615850e-47 |
| Msa0029360 | Msa1031460 | 0.827153 | 1.830767e-54 | -8.615850e-47 |
| Msa0029360 | Msa1070540 | 0.806163 | 9.398652e-50 | -8.615850e-47 |
| Msa0029360 | Msa1080680 | -0.800665 | 1.295706e-48 | -8.615850e-47 |
| Msa0029360 | Msa1101240 | 0.809973 | 1.452016e-50 | -8.615850e-47 |
| Msa0029360 | Msa1164720 | -0.808822 | 2.563744e-50 | -8.615850e-47 |
| Msa0029360 | Msa1167150 | -0.801257 | 9.804643e-49 | -8.615850e-47 |
| Msa0029360 | Msa1252210 | -0.808785 | 2.611073e-50 | -8.615850e-47 |
| Msa0029360 | Msa1367560 | -0.817232 | 3.669793e-52 | -8.615850e-47 |
| Msa0029360 | Msa1376680 | -0.807219 | 5.624951e-50 | -8.615850e-47 |
| Msa0029360 | Msa1444770 | -0.806327 | 8.682448e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029360 | MtrunA17_Chr1g0186121 | 93.515 | 293 | 19 | 0 | 1 | 293 | 20 | 312 | 0.0 | 548 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 102 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATATTGTCCCCATAAAT+TGG | 0.244828 | 1_1:-54715573 | Msa0029360:five_prime_UTR |
| GAGTGAGATAGTCCAATTTA+TGG | 0.256349 | 1_1:+54715561 | None:intergenic |
| TGAGCAAGAGCATGTCTATT+TGG | 0.260332 | 1_1:+54712462 | None:intergenic |
| TACCTGTTATTGAAGACTTT+GGG | 0.278202 | 1_1:-54713757 | Msa0029360:CDS |
| TTTGGTACTTTGACAATAGA+TGG | 0.307291 | 1_1:+54713938 | None:intergenic |
| TAGGTTCCATCTCAAGAAAA+AGG | 0.324911 | 1_1:-54712252 | Msa0029360:three_prime_UTR |
| TCCAATTTATGGGGACAATA+TGG | 0.329501 | 1_1:+54715572 | None:intergenic |
| TTCTGCAGAACCGGAGGAAT+TGG | 0.348481 | 1_1:+54713718 | None:intergenic |
| TACCTGTCACTGAAGACTTT+GGG | 0.350219 | 1_1:-54713631 | Msa0029360:CDS |
| TGATCATGTAGGAAAGAAAA+AGG | 0.353754 | 1_1:-54712358 | Msa0029360:CDS |
| TCTTGTCTTAATTTCACCTT+TGG | 0.358291 | 1_1:+54714912 | None:intergenic |
| AGACTTTGGGGACGGCGGTT+TGG | 0.358797 | 1_1:-54713618 | Msa0029360:CDS |
| CACAAATAAACATTGAAAAC+TGG | 0.373736 | 1_1:+54712169 | None:intergenic |
| ACAGCACGAGGGCGTGGAAT+TGG | 0.374576 | 1_1:+54713497 | None:intergenic |
| CTATCTCACTCAGAGTCAAT+AGG | 0.376017 | 1_1:-54715549 | Msa0029360:five_prime_UTR |
| TCTTGCGTCCGGAGGAATAT+CGG | 0.385319 | 1_1:+54712413 | None:intergenic |
| CTTCTCTGGTTCTGCAGAAC+CGG | 0.386674 | 1_1:+54713709 | None:intergenic |
| ACAGAAAATGACTTAATGAT+TGG | 0.389455 | 1_1:-54712543 | Msa0029360:intron |
| TCCCCAAAGTCTTCAATAAC+AGG | 0.399542 | 1_1:+54713755 | None:intergenic |
| GTACCTGTTATTGAAGACTT+TGG | 0.416459 | 1_1:-54713758 | Msa0029360:CDS |
| TATCTCACTCAGAGTCAATA+GGG | 0.417419 | 1_1:-54715548 | Msa0029360:five_prime_UTR |
| ATGTGACATGATCTTAATCT+AGG | 0.417453 | 1_1:-54712277 | Msa0029360:three_prime_UTR |
| AGCAGAAACAAGACTGGAAA+TGG | 0.419403 | 1_1:-54712519 | Msa0029360:CDS |
| TTCCACTCTCCTACTTCTCC+TGG | 0.421371 | 1_1:-54714819 | Msa0029360:intron |
| GCATCCGATTTGTCAGGACC+TGG | 0.425980 | 1_1:-54713596 | Msa0029360:CDS |
| TCTATATTGCCGTCCTTCTC+AGG | 0.427850 | 1_1:+54713551 | None:intergenic |
| AGTGAGATAGTCCAATTTAT+GGG | 0.431779 | 1_1:+54715562 | None:intergenic |
| AAAATTCGAAATTGAAATGC+TGG | 0.441202 | 1_1:-54715521 | Msa0029360:five_prime_UTR |
| TGGGGACAATATGGAGGAGG+GGG | 0.448654 | 1_1:+54715581 | None:intergenic |
| TCAGTATCTCCATCCTTCTC+TGG | 0.448833 | 1_1:+54713695 | None:intergenic |
| TCAGTATCTCCATCCTTCTC+TGG | 0.448833 | 1_1:+54713821 | None:intergenic |
| ATCAACTTTATCTTTAGACT+TGG | 0.466112 | 1_1:+54712377 | None:intergenic |
| AGTTTGACATCTGATTCCTC+TGG | 0.470171 | 1_1:-54713854 | Msa0029360:CDS |
| GTACCTGTCACTGAAGACTT+TGG | 0.473223 | 1_1:-54713632 | Msa0029360:CDS |
| CAGAAAATGACTTAATGATT+GGG | 0.477294 | 1_1:-54712542 | Msa0029360:CDS |
| CTGATAATTTACATAGGCAC+TGG | 0.480813 | 1_1:-54712314 | Msa0029360:CDS |
| TCCCCAAAGTCTTCAGTGAC+AGG | 0.504033 | 1_1:+54713629 | None:intergenic |
| ATGGGGACAATATGGAGGAG+GGG | 0.505567 | 1_1:+54715580 | None:intergenic |
| ATCTTTAGACTTGGGCTCTG+TGG | 0.509252 | 1_1:+54712386 | None:intergenic |
| CATCCGATTTGTCAGGACCT+GGG | 0.510606 | 1_1:-54713595 | Msa0029360:CDS |
| GGTTTGGCATCCGATTTGTC+AGG | 0.511838 | 1_1:-54713602 | Msa0029360:CDS |
| GGTTTGACATCCAATTCCTC+CGG | 0.524831 | 1_1:-54713728 | Msa0029360:CDS |
| AGGTACTCGTGGAATCAAAT+CGG | 0.525694 | 1_1:+54713775 | None:intergenic |
| TCAACTTTATCTTTAGACTT+GGG | 0.525773 | 1_1:+54712378 | None:intergenic |
| AGTATGAGATTTACCAGGAC+TGG | 0.527190 | 1_1:+54713469 | None:intergenic |
| GAGTAATTACCAGGAGAAGT+AGG | 0.529062 | 1_1:+54714810 | None:intergenic |
| ATCCGATTTGTCAGGACCTG+GGG | 0.530457 | 1_1:-54713594 | Msa0029360:CDS |
| TTATGGGGACAATATGGAGG+AGG | 0.530952 | 1_1:+54715578 | None:intergenic |
| ACTGCAGTCGACAAAATCTT+CGG | 0.536162 | 1_1:+54713874 | None:intergenic |
| CGTGCTGTCATATCCAGTCC+TGG | 0.537499 | 1_1:-54713482 | Msa0029360:intron |
| CATGATCTTAATCTAGGACT+AGG | 0.540490 | 1_1:-54712271 | Msa0029360:three_prime_UTR |
| AAGAAAGACTGAGTGGATAC+CGG | 0.541889 | 1_1:+54715719 | None:intergenic |
| TGGTTCTGCAGAACCAGAGA+AGG | 0.544655 | 1_1:-54713834 | Msa0029360:CDS |
| AAAGATAAAGTTGATCATGT+AGG | 0.545329 | 1_1:-54712369 | Msa0029360:CDS |
| ACTTGTGGCAAGTAACACTT+TGG | 0.547468 | 1_1:+54713920 | None:intergenic |
| GGTGGTGATGTAAGAGACCT+TGG | 0.548065 | 1_1:-54714867 | Msa0029360:CDS |
| GATATGACAGCACGAGGGCG+TGG | 0.550059 | 1_1:+54713491 | None:intergenic |
| CGGTTCTGCAGAACCAGAGA+AGG | 0.550317 | 1_1:-54713708 | Msa0029360:CDS |
| AGGAAGATATATAATGCCTC+AGG | 0.557283 | 1_1:+54712114 | None:intergenic |
| CTCTGGTTCTGCAGAACCAG+AGG | 0.560999 | 1_1:+54713838 | None:intergenic |
| AATAGAGTAACACAAAAGCA+AGG | 0.564598 | 1_1:+54715691 | None:intergenic |
| ACATGAGAAAGATGAATACA+AGG | 0.564963 | 1_1:-54714889 | Msa0029360:CDS |
| ACCTGTTATTGAAGACTTTG+GGG | 0.566193 | 1_1:-54713756 | Msa0029360:CDS |
| CTCTGGTTCTGCAGAACCGG+AGG | 0.570758 | 1_1:+54713712 | None:intergenic |
| ATTGGGAGCAGAAACAAGAC+TGG | 0.572746 | 1_1:-54712525 | Msa0029360:CDS |
| GTTATTGAAGACTTTGGGGA+AGG | 0.576122 | 1_1:-54713752 | Msa0029360:CDS |
| TATGGGGACAATATGGAGGA+GGG | 0.576228 | 1_1:+54715579 | None:intergenic |
| GGATCAGTGATGTTATGTTA+TGG | 0.576856 | 1_1:+54715664 | None:intergenic |
| ACCTGTCACTGAAGACTTTG+GGG | 0.594909 | 1_1:-54713630 | Msa0029360:CDS |
| TAAAATCTGATAATTTACAT+AGG | 0.595012 | 1_1:-54712320 | Msa0029360:CDS |
| GAAGGATCATGGACCTGAGA+AGG | 0.596092 | 1_1:-54713564 | Msa0029360:CDS |
| TACCAGGAGAAGTAGGAGAG+TGG | 0.597652 | 1_1:+54714817 | None:intergenic |
| ATAGAGTAACACAAAAGCAA+GGG | 0.599498 | 1_1:+54715692 | None:intergenic |
| TCTTCAATAACAGGTACTCG+TGG | 0.602537 | 1_1:+54713764 | None:intergenic |
| TGACACTACCGATATTCCTC+CGG | 0.603823 | 1_1:-54712421 | Msa0029360:CDS |
| AAGTATTAAGCATGTCGTCA+TGG | 0.603976 | 1_1:+54712197 | None:intergenic |
| AGAGAAAAGCTTTCAAACCA+AGG | 0.604343 | 1_1:+54714850 | None:intergenic |
| ATTGAAGACTTTGGGGAAGG+CGG | 0.604745 | 1_1:-54713749 | Msa0029360:CDS |
| TCTGCAGAACCAGAGAAGGA+TGG | 0.614650 | 1_1:-54713704 | Msa0029360:CDS |
| TCTGCAGAACCAGAGAAGGA+TGG | 0.614650 | 1_1:-54713830 | Msa0029360:CDS |
| AGATTAAGATCATGTCACAT+TGG | 0.629085 | 1_1:+54712280 | None:intergenic |
| TCTTCGGTTACAGATACTCG+TGG | 0.630012 | 1_1:+54713890 | None:intergenic |
| AAACAGTCACAACATATACA+AGG | 0.634574 | 1_1:-54715483 | Msa0029360:five_prime_UTR |
| ACTGAAGACTTTGGGGACGG+CGG | 0.636584 | 1_1:-54713623 | Msa0029360:CDS |
| AAATCTTAAGCAAAAGAGAG+AGG | 0.638186 | 1_1:+54712094 | None:intergenic |
| TCTTCAGTGACAGGTACTCG+TGG | 0.639277 | 1_1:+54713638 | None:intergenic |
| TGGACAAATAATATTTGCAG+TGG | 0.640896 | 1_1:+54715643 | None:intergenic |
| GATCATGGACCTGAGAAGGA+CGG | 0.642589 | 1_1:-54713560 | Msa0029360:CDS |
| ACTCGTGGAATTGATACTTG+TGG | 0.645193 | 1_1:+54713905 | None:intergenic |
| ATCTCACTCAGAGTCAATAG+GGG | 0.646258 | 1_1:-54715547 | Msa0029360:five_prime_UTR |
| TAGAGTAACACAAAAGCAAG+GGG | 0.649943 | 1_1:+54715693 | None:intergenic |
| GTCACTGAAGACTTTGGGGA+CGG | 0.652392 | 1_1:-54713626 | Msa0029360:CDS |
| CATGAGAAAGATGAATACAA+GGG | 0.653599 | 1_1:-54714888 | Msa0029360:CDS |
| GTGAGATAGTCCAATTTATG+GGG | 0.653847 | 1_1:+54715563 | None:intergenic |
| TCCGATTTGTCAGGACCTGG+GGG | 0.661422 | 1_1:-54713593 | Msa0029360:CDS |
| TGTGAGATTATTAAGCAACA+AGG | 0.665627 | 1_1:-54712142 | Msa0029360:three_prime_UTR |
| GGACTGGATATGACAGCACG+AGG | 0.670634 | 1_1:+54713485 | None:intergenic |
| AAGCAACAAGGCATTGCCTG+AGG | 0.670667 | 1_1:-54712130 | Msa0029360:three_prime_UTR |
| AATTTATGGGGACAATATGG+AGG | 0.680667 | 1_1:+54715575 | None:intergenic |
| GGGGAGAAAGAAAGACTGAG+TGG | 0.682475 | 1_1:+54715712 | None:intergenic |
| GAGAAAGATGAATACAAGGG+TGG | 0.696625 | 1_1:-54714885 | Msa0029360:CDS |
| GACTGGATATGACAGCACGA+GGG | 0.748991 | 1_1:+54713486 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTATAAAAAAAAAA+GGG | + | chr1_1:54712974-54712993 | None:intergenic | 0.0% |
| !!! | ATTTTTATTATAAAAAAAAA+AGG | + | chr1_1:54712975-54712994 | None:intergenic | 0.0% |
| !! | ATAAAAATAAAAATAAAAAA+AGG | + | chr1_1:54713717-54713736 | None:intergenic | 0.0% |
| !! | TTAAGTAATATTATATTGTT+AGG | - | chr1_1:54714774-54714793 | Msa0029360:intron | 10.0% |
| !!! | AAATAATAAAATGATGATGA+TGG | + | chr1_1:54712629-54712648 | None:intergenic | 15.0% |
| !! | TTATAGAAATAAGTTACTTA+TGG | - | chr1_1:54713206-54713225 | Msa0029360:intron | 15.0% |
| !! | AATTATTTGAACCAAAAATT+AGG | - | chr1_1:54713658-54713677 | Msa0029360:CDS | 15.0% |
| !!! | AAAATTGAAACAAAATTTTG+AGG | + | chr1_1:54715184-54715203 | None:intergenic | 15.0% |
| !! | TAAAATCTGATAATTTACAT+AGG | - | chr1_1:54715431-54715450 | Msa0029360:intron | 15.0% |
| !!! | AAATTTCAAAGACTTTTTGA+TGG | + | chr1_1:54712141-54712160 | None:intergenic | 20.0% |
| !! | GAAATAATACTTATCTGAAA+TGG | - | chr1_1:54712412-54712431 | Msa0029360:CDS | 20.0% |
| !!! | TCAATTTTTTTGTTTTGACT+TGG | - | chr1_1:54712995-54713014 | Msa0029360:intron | 20.0% |
| !! | AAAAATTTGAGCTTCAAATA+AGG | + | chr1_1:54713512-54713531 | None:intergenic | 20.0% |
| !! | ATAAAATTGCAAAAAGTAAC+TGG | + | chr1_1:54714352-54714371 | None:intergenic | 20.0% |
| !!! | TATCATAGATAACAATGTTT+TGG | - | chr1_1:54714433-54714452 | Msa0029360:intron | 20.0% |
| !!! | ATCATAGATAACAATGTTTT+GGG | - | chr1_1:54714434-54714453 | Msa0029360:intron | 20.0% |
| !! | AATATTTGTGTATGTTCTAA+AGG | + | chr1_1:54714510-54714529 | None:intergenic | 20.0% |
| !!! | AGTACTGAAAAGAATATTTT+AGG | - | chr1_1:54714708-54714727 | Msa0029360:intron | 20.0% |
| !!! | GTACTGAAAAGAATATTTTA+GGG | - | chr1_1:54714709-54714728 | Msa0029360:intron | 20.0% |
| !! | AATGAAGTGCATTATAATTA+AGG | + | chr1_1:54714850-54714869 | None:intergenic | 20.0% |
| ! | AAAATTCGAAATTGAAATGC+TGG | - | chr1_1:54712230-54712249 | Msa0029360:three_prime_UTR | 25.0% |
| ! | TGAGAAAGAAGGAAAAAAAA+GGG | + | chr1_1:54712684-54712703 | None:intergenic | 25.0% |
| ! | AAATCATGTTTCATCAAAAG+TGG | + | chr1_1:54712785-54712804 | None:intergenic | 25.0% |
| !!! | CATGATTTGATTGTTTTGTT+TGG | - | chr1_1:54712797-54712816 | Msa0029360:intron | 25.0% |
| !!! | TTATTTTTCAGTGTATCCAA+AGG | - | chr1_1:54712823-54712842 | Msa0029360:intron | 25.0% |
| ! | TTTGTTTCAAAGACATGATA+AGG | - | chr1_1:54713018-54713037 | Msa0029360:intron | 25.0% |
| !!! | TCAACTAAGCTATTTTAAAC+AGG | - | chr1_1:54713297-54713316 | Msa0029360:intron | 25.0% |
| !! | GATATTATGGTCCTAATTTT+TGG | + | chr1_1:54713672-54713691 | None:intergenic | 25.0% |
| ! | ATAAAGCATAACTGTTCTTA+TGG | + | chr1_1:54714414-54714433 | None:intergenic | 25.0% |
| !!! | ATCTGAAAACTCGTTTTTTA+GGG | + | chr1_1:54714575-54714594 | None:intergenic | 25.0% |
| !!! | AATCTGAAAACTCGTTTTTT+AGG | + | chr1_1:54714576-54714595 | None:intergenic | 25.0% |
| ! | AAGGTAAACAAAACTCATAA+TGG | - | chr1_1:54714624-54714643 | Msa0029360:intron | 25.0% |
| !! | AGGTTTATTATGTAGCTTTT+CGG | - | chr1_1:54715152-54715171 | Msa0029360:intron | 25.0% |
| ! | ACAGAAAATGACTTAATGAT+TGG | - | chr1_1:54715208-54715227 | Msa0029360:intron | 25.0% |
| ! | CAGAAAATGACTTAATGATT+GGG | - | chr1_1:54715209-54715228 | Msa0029360:intron | 25.0% |
| ! | TCAACTTTATCTTTAGACTT+GGG | + | chr1_1:54715376-54715395 | None:intergenic | 25.0% |
| ! | ATCAACTTTATCTTTAGACT+TGG | + | chr1_1:54715377-54715396 | None:intergenic | 25.0% |
| !! | AAAGATAAAGTTGATCATGT+AGG | - | chr1_1:54715382-54715401 | Msa0029360:intron | 25.0% |
| ! | CACAAATAAACATTGAAAAC+TGG | + | chr1_1:54715585-54715604 | None:intergenic | 25.0% |
| ATAGAGTAACACAAAAGCAA+GGG | + | chr1_1:54712062-54712081 | None:intergenic | 30.0% | |
| AATAGAGTAACACAAAAGCA+AGG | + | chr1_1:54712063-54712082 | None:intergenic | 30.0% | |
| TGGACAAATAATATTTGCAG+TGG | + | chr1_1:54712111-54712130 | None:intergenic | 30.0% | |
| AGTGAGATAGTCCAATTTAT+GGG | + | chr1_1:54712192-54712211 | None:intergenic | 30.0% | |
| AAACAGTCACAACATATACA+AGG | - | chr1_1:54712268-54712287 | Msa0029360:three_prime_UTR | 30.0% | |
| ACAAGGAAAAAAGAGAGAAA+AGG | - | chr1_1:54712285-54712304 | Msa0029360:three_prime_UTR | 30.0% | |
| TGAAATAGATGAACAGTGAA+AGG | + | chr1_1:54712315-54712334 | None:intergenic | 30.0% | |
| TGATTAAAACGAAGTAAACG+TGG | - | chr1_1:54712459-54712478 | Msa0029360:CDS | 30.0% | |
| GATTAAAACGAAGTAAACGT+GGG | - | chr1_1:54712460-54712479 | Msa0029360:CDS | 30.0% | |
| ATTAAAACGAAGTAAACGTG+GGG | - | chr1_1:54712461-54712480 | Msa0029360:CDS | 30.0% | |
| CTGAGAAAGAAGGAAAAAAA+AGG | + | chr1_1:54712685-54712704 | None:intergenic | 30.0% | |
| TCTTGTCTTAATTTCACCTT+TGG | + | chr1_1:54712842-54712861 | None:intergenic | 30.0% | |
| ACATGAGAAAGATGAATACA+AGG | - | chr1_1:54712862-54712881 | Msa0029360:intron | 30.0% | |
| CATGAGAAAGATGAATACAA+GGG | - | chr1_1:54712863-54712882 | Msa0029360:intron | 30.0% | |
| GGAAAATTAGAGTAATTACC+AGG | + | chr1_1:54712953-54712972 | None:intergenic | 30.0% | |
| !!! | TCAATCGTTTTTTACACTGA+CGG | + | chr1_1:54713060-54713079 | None:intergenic | 30.0% |
| CTGTTATTCATAAGCTATCA+TGG | - | chr1_1:54713178-54713197 | Msa0029360:intron | 30.0% | |
| ATTGACATTGAATCTTGAGA+GGG | - | chr1_1:54713468-54713487 | Msa0029360:intron | 30.0% | |
| ATGAAGTCGATAATATGCAT+AGG | - | chr1_1:54713537-54713556 | Msa0029360:CDS | 30.0% | |
| !! | ATAGGCTTTCTACTTTTATG+TGG | - | chr1_1:54713555-54713574 | Msa0029360:CDS | 30.0% |
| ATGTTAGTTACTTGAAAAGC+AGG | - | chr1_1:54713633-54713652 | Msa0029360:CDS | 30.0% | |
| AGTGACTCTATATCAGTAAA+TGG | + | chr1_1:54713750-54713769 | None:intergenic | 30.0% | |
| ! | ATTGTCTAATTTTGCAGTGA+AGG | - | chr1_1:54713770-54713789 | Msa0029360:CDS | 30.0% |
| TTTGGTACTTTGACAATAGA+TGG | + | chr1_1:54713816-54713835 | None:intergenic | 30.0% | |
| TACCTGTTATTGAAGACTTT+GGG | - | chr1_1:54713994-54714013 | Msa0029360:intron | 30.0% | |
| ATAGCTAAACAGAAAACTGA+TGG | + | chr1_1:54714308-54714327 | None:intergenic | 30.0% | |
| ATTGTCTGAGCTATAACTAA+AGG | - | chr1_1:54714370-54714389 | Msa0029360:intron | 30.0% | |
| TTACCAACATCTATATCTCT+TGG | + | chr1_1:54714483-54714502 | None:intergenic | 30.0% | |
| ! | AAAGTACTTCAAATTTGCTC+CGG | + | chr1_1:54714603-54714622 | None:intergenic | 30.0% |
| ! | GCAAATTTGAAGTACTTTGA+AGG | - | chr1_1:54714605-54714624 | Msa0029360:intron | 30.0% |
| ! | ATATTCTTTTCAGTACTCCA+AGG | + | chr1_1:54714705-54714724 | None:intergenic | 30.0% |
| TATGCATTAAGTGAGAATAC+AGG | - | chr1_1:54714888-54714907 | Msa0029360:CDS | 30.0% | |
| ATGCATTAAGTGAGAATACA+GGG | - | chr1_1:54714889-54714908 | Msa0029360:CDS | 30.0% | |
| ATCTCTATAGCAAATAAGCA+AGG | - | chr1_1:54714921-54714940 | Msa0029360:intron | 30.0% | |
| !! | TAATTTTCACTTCTAGCTGA+TGG | - | chr1_1:54714988-54715007 | Msa0029360:intron | 30.0% |
| AGAATTCAATTCGTTGTTTG+TGG | - | chr1_1:54715016-54715035 | Msa0029360:intron | 30.0% | |
| ACTAGAATCAGCATAATTGA+TGG | + | chr1_1:54715098-54715117 | None:intergenic | 30.0% | |
| ! | TCTACTTTCTGTGTTATTCA+AGG | - | chr1_1:54715132-54715151 | Msa0029360:intron | 30.0% |
| TGATCATGTAGGAAAGAAAA+AGG | - | chr1_1:54715393-54715412 | Msa0029360:intron | 30.0% | |
| AGATTAAGATCATGTCACAT+TGG | + | chr1_1:54715474-54715493 | None:intergenic | 30.0% | |
| ATGTGACATGATCTTAATCT+AGG | - | chr1_1:54715474-54715493 | Msa0029360:five_prime_UTR | 30.0% | |
| TGTGAGATTATTAAGCAACA+AGG | - | chr1_1:54715609-54715628 | Msa0029360:five_prime_UTR | 30.0% | |
| AAATCTTAAGCAAAAGAGAG+AGG | + | chr1_1:54715660-54715679 | None:intergenic | 30.0% | |
| ! | TCTCTTTTGCTTAAGATTTC+AGG | - | chr1_1:54715661-54715680 | Msa0029360:five_prime_UTR | 30.0% |
| TAGAGTAACACAAAAGCAAG+GGG | + | chr1_1:54712061-54712080 | None:intergenic | 35.0% | |
| GGATCAGTGATGTTATGTTA+TGG | + | chr1_1:54712090-54712109 | None:intergenic | 35.0% | |
| !!! | CAAAGACTTTTTGATGGTGA+TGG | + | chr1_1:54712135-54712154 | None:intergenic | 35.0% |
| AATTTATGGGGACAATATGG+AGG | + | chr1_1:54712179-54712198 | None:intergenic | 35.0% | |
| TCCATATTGTCCCCATAAAT+TGG | - | chr1_1:54712178-54712197 | Msa0029360:three_prime_UTR | 35.0% | |
| TCCAATTTATGGGGACAATA+TGG | + | chr1_1:54712182-54712201 | None:intergenic | 35.0% | |
| GTGAGATAGTCCAATTTATG+GGG | + | chr1_1:54712191-54712210 | None:intergenic | 35.0% | |
| GAGTGAGATAGTCCAATTTA+TGG | + | chr1_1:54712193-54712212 | None:intergenic | 35.0% | |
| TATCTCACTCAGAGTCAATA+GGG | - | chr1_1:54712203-54712222 | Msa0029360:three_prime_UTR | 35.0% | |
| TAAACGTGGGGAAGTAAAAA+AGG | - | chr1_1:54712473-54712492 | Msa0029360:CDS | 35.0% | |
| TGTGTTGTCTAAACTCAAGT+TGG | - | chr1_1:54712507-54712526 | Msa0029360:CDS | 35.0% | |
| GTGTTGTCTAAACTCAAGTT+GGG | - | chr1_1:54712508-54712527 | Msa0029360:CDS | 35.0% | |
| ! | GTCAAAAGGCATGAACATAA+TGG | - | chr1_1:54712539-54712558 | Msa0029360:CDS | 35.0% |
| AGAGAAAAGCTTTCAAACCA+AGG | + | chr1_1:54712904-54712923 | None:intergenic | 35.0% | |
| TGTCGATAAACTCGTATGAA+TGG | - | chr1_1:54713244-54713263 | Msa0029360:intron | 35.0% | |
| TCTAGATCACTACAGCTTTA+TGG | + | chr1_1:54713323-54713342 | None:intergenic | 35.0% | |
| GATTGACATTGAATCTTGAG+AGG | - | chr1_1:54713467-54713486 | Msa0029360:intron | 35.0% | |
| ! | ACTCAGCTTGTTCTTCAATT+TGG | - | chr1_1:54713604-54713623 | Msa0029360:CDS | 35.0% |
| ! | ATGACTGGTTCAGGATATTA+TGG | + | chr1_1:54713685-54713704 | None:intergenic | 35.0% |
| AAAAGGAAATTCTGCATGAC+TGG | + | chr1_1:54713700-54713719 | None:intergenic | 35.0% | |
| GTACCTGTTATTGAAGACTT+TGG | - | chr1_1:54713993-54714012 | Msa0029360:intron | 35.0% | |
| ACCTGTTATTGAAGACTTTG+GGG | - | chr1_1:54713995-54714014 | Msa0029360:intron | 35.0% | |
| ! | ACTAAAGGTTGACTTAGAGA+TGG | - | chr1_1:54714385-54714404 | Msa0029360:intron | 35.0% |
| CTATATCTCTTGGCTTCAAT+GGG | + | chr1_1:54714473-54714492 | None:intergenic | 35.0% | |
| TCTATATCTCTTGGCTTCAA+TGG | + | chr1_1:54714474-54714493 | None:intergenic | 35.0% | |
| AAGCCAAGAGATATAGATGT+TGG | - | chr1_1:54714477-54714496 | Msa0029360:intron | 35.0% | |
| ! | ACGAGTTTTCAGATTAAGAC+CGG | - | chr1_1:54714581-54714600 | Msa0029360:intron | 35.0% |
| !! | CATAATGGAAGCACTTCATA+TGG | - | chr1_1:54714639-54714658 | Msa0029360:intron | 35.0% |
| AGTGACATGAAAAGAAACCT+TGG | - | chr1_1:54714685-54714704 | Msa0029360:intron | 35.0% | |
| ! | AAACTTGAATTTTGAGCCTG+TGG | - | chr1_1:54714733-54714752 | Msa0029360:intron | 35.0% |
| ! | TATTGTTAGGAGACTGCTTT+TGG | - | chr1_1:54714787-54714806 | Msa0029360:intron | 35.0% |
| TCTCACTTAATGCATACCAT+AGG | + | chr1_1:54714884-54714903 | None:intergenic | 35.0% | |
| GGAAAGAAAAAGGTTCACAA+AGG | - | chr1_1:54715403-54715422 | Msa0029360:intron | 35.0% | |
| CTGATAATTTACATAGGCAC+TGG | - | chr1_1:54715437-54715456 | Msa0029360:intron | 35.0% | |
| ! | CATGATCTTAATCTAGGACT+AGG | - | chr1_1:54715480-54715499 | Msa0029360:five_prime_UTR | 35.0% |
| TAGGTTCCATCTCAAGAAAA+AGG | - | chr1_1:54715499-54715518 | Msa0029360:five_prime_UTR | 35.0% | |
| AGGTTCCATCTCAAGAAAAA+GGG | - | chr1_1:54715500-54715519 | Msa0029360:five_prime_UTR | 35.0% | |
| ! | TCTTTCCCTTTTTCTTGAGA+TGG | + | chr1_1:54715508-54715527 | None:intergenic | 35.0% |
| AAGTATTAAGCATGTCGTCA+TGG | + | chr1_1:54715557-54715576 | None:intergenic | 35.0% | |
| AGGAAGATATATAATGCCTC+AGG | + | chr1_1:54715640-54715659 | None:intergenic | 35.0% | |
| AAGAAAGACTGAGTGGATAC+CGG | + | chr1_1:54712035-54712054 | None:intergenic | 40.0% | |
| CTATCTCACTCAGAGTCAAT+AGG | - | chr1_1:54712202-54712221 | Msa0029360:three_prime_UTR | 40.0% | |
| ATCTCACTCAGAGTCAATAG+GGG | - | chr1_1:54712204-54712223 | Msa0029360:three_prime_UTR | 40.0% | |
| !! | TTGTCTAAACTCAAGTTGGG+TGG | - | chr1_1:54712511-54712530 | Msa0029360:CDS | 40.0% |
| ATGAACATAATGGCGTGTGA+AGG | - | chr1_1:54712549-54712568 | Msa0029360:intron | 40.0% | |
| !! | GATGATGATGGTGTTGTGTT+GGG | + | chr1_1:54712617-54712636 | None:intergenic | 40.0% |
| !! | TGATGATGATGGTGTTGTGT+TGG | + | chr1_1:54712618-54712637 | None:intergenic | 40.0% |
| ! | CTTCTGACTTCTGAGAAAGA+AGG | + | chr1_1:54712695-54712714 | None:intergenic | 40.0% |
| GAGAAAGATGAATACAAGGG+TGG | - | chr1_1:54712866-54712885 | Msa0029360:intron | 40.0% | |
| GAGTAATTACCAGGAGAAGT+AGG | + | chr1_1:54712944-54712963 | None:intergenic | 40.0% | |
| ! | TGTAGTGATCTAGAGTGCTT+TGG | - | chr1_1:54713329-54713348 | Msa0029360:intron | 40.0% |
| ! | GTAGTGATCTAGAGTGCTTT+GGG | - | chr1_1:54713330-54713349 | Msa0029360:intron | 40.0% |
| ! | TAGTGATCTAGAGTGCTTTG+GGG | - | chr1_1:54713331-54713350 | Msa0029360:intron | 40.0% |
| AACTGTCAAGTATGTGAGTG+GGG | + | chr1_1:54713387-54713406 | None:intergenic | 40.0% | |
| GAACTGTCAAGTATGTGAGT+GGG | + | chr1_1:54713388-54713407 | None:intergenic | 40.0% | |
| AGAACTGTCAAGTATGTGAG+TGG | + | chr1_1:54713389-54713408 | None:intergenic | 40.0% | |
| AGAGAGAATGACGATGATGT+CGG | + | chr1_1:54713435-54713454 | None:intergenic | 40.0% | |
| ACATTGAATCTTGAGAGGGT+GGG | - | chr1_1:54713472-54713491 | Msa0029360:intron | 40.0% | |
| ! | AAATTCTGCATGACTGGTTC+AGG | + | chr1_1:54713694-54713713 | None:intergenic | 40.0% |
| ACTTGTGGCAAGTAACACTT+TGG | + | chr1_1:54713834-54713853 | None:intergenic | 40.0% | |
| ACTCGTGGAATTGATACTTG+TGG | + | chr1_1:54713849-54713868 | None:intergenic | 40.0% | |
| ACTGCAGTCGACAAAATCTT+CGG | + | chr1_1:54713880-54713899 | None:intergenic | 40.0% | |
| AGTTTGACATCTGATTCCTC+TGG | - | chr1_1:54713897-54713916 | Msa0029360:CDS | 40.0% | |
| AGGTACTCGTGGAATCAAAT+CGG | + | chr1_1:54713979-54713998 | None:intergenic | 40.0% | |
| TCTTCAATAACAGGTACTCG+TGG | + | chr1_1:54713990-54714009 | None:intergenic | 40.0% | |
| TCCCCAAAGTCTTCAATAAC+AGG | + | chr1_1:54713999-54714018 | None:intergenic | 40.0% | |
| ! | GTTATTGAAGACTTTGGGGA+AGG | - | chr1_1:54713999-54714018 | Msa0029360:intron | 40.0% |
| TACCTGTCACTGAAGACTTT+GGG | - | chr1_1:54714120-54714139 | Msa0029360:intron | 40.0% | |
| AGTATGAGATTTACCAGGAC+TGG | + | chr1_1:54714285-54714304 | None:intergenic | 40.0% | |
| GATGGAGTATGAGATTTACC+AGG | + | chr1_1:54714290-54714309 | None:intergenic | 40.0% | |
| TTAATGCATACCATAGGCTC+TGG | + | chr1_1:54714878-54714897 | None:intergenic | 40.0% | |
| GTTTGTGGTTGTGAAGAGAA+TGG | - | chr1_1:54715031-54715050 | Msa0029360:intron | 40.0% | |
| CAGAAAGTAGATGCAAAGTG+AGG | + | chr1_1:54715123-54715142 | None:intergenic | 40.0% | |
| AGCAGAAACAAGACTGGAAA+TGG | - | chr1_1:54715232-54715251 | Msa0029360:intron | 40.0% | |
| ! | TGAGCAAGAGCATGTCTATT+TGG | + | chr1_1:54715292-54715311 | None:intergenic | 40.0% |
| !!! | GACTTTTTGATGGTGATGGC+TGG | + | chr1_1:54712131-54712150 | None:intergenic | 45.0% |
| TATGGGGACAATATGGAGGA+GGG | + | chr1_1:54712175-54712194 | None:intergenic | 45.0% | |
| TTATGGGGACAATATGGAGG+AGG | + | chr1_1:54712176-54712195 | None:intergenic | 45.0% | |
| ! | AGTGATCTAGAGTGCTTTGG+GGG | - | chr1_1:54713332-54713351 | Msa0029360:intron | 45.0% |
| ACTGTCAAGTATGTGAGTGG+GGG | + | chr1_1:54713386-54713405 | None:intergenic | 45.0% | |
| GACATTGAATCTTGAGAGGG+TGG | - | chr1_1:54713471-54713490 | Msa0029360:intron | 45.0% | |
| TCTTCGGTTACAGATACTCG+TGG | + | chr1_1:54713864-54713883 | None:intergenic | 45.0% | |
| TCAGTATCTCCATCCTTCTC+TGG | + | chr1_1:54713933-54713952 | None:intergenic | 45.0% | |
| ! | ATTGAAGACTTTGGGGAAGG+CGG | - | chr1_1:54714002-54714021 | Msa0029360:intron | 45.0% |
| GGTTTGACATCCAATTCCTC+CGG | - | chr1_1:54714023-54714042 | Msa0029360:intron | 45.0% | |
| TCAGTATCTCCATCCTTCTC+TGG | + | chr1_1:54713933-54713952 | None:intergenic | 45.0% | |
| GTACCTGTCACTGAAGACTT+TGG | - | chr1_1:54714119-54714138 | Msa0029360:intron | 45.0% | |
| ACCTGTCACTGAAGACTTTG+GGG | - | chr1_1:54714121-54714140 | Msa0029360:intron | 45.0% | |
| TCTATATTGCCGTCCTTCTC+AGG | + | chr1_1:54714203-54714222 | None:intergenic | 45.0% | |
| AGGGTTGCATTGCATCATTC+TGG | + | chr1_1:54714556-54714575 | None:intergenic | 45.0% | |
| ! | GAATTTTGAGCCTGTGGTTG+TGG | - | chr1_1:54714739-54714758 | Msa0029360:intron | 45.0% |
| GATGTAAATGCCACAACCAC+AGG | + | chr1_1:54714752-54714771 | None:intergenic | 45.0% | |
| ! | TCATTTTGCTCCAGAGCCTA+TGG | - | chr1_1:54714865-54714884 | Msa0029360:CDS | 45.0% |
| ATTGGGAGCAGAAACAAGAC+TGG | - | chr1_1:54715226-54715245 | Msa0029360:intron | 45.0% | |
| TGACACTACCGATATTCCTC+CGG | - | chr1_1:54715330-54715349 | Msa0029360:intron | 45.0% | |
| ! | TCTGTGGATTTTCTTGCGTC+CGG | + | chr1_1:54715352-54715371 | None:intergenic | 45.0% |
| ATCTTTAGACTTGGGCTCTG+TGG | + | chr1_1:54715368-54715387 | None:intergenic | 45.0% | |
| GGGGAGAAAGAAAGACTGAG+TGG | + | chr1_1:54712042-54712061 | None:intergenic | 50.0% | |
| ATGGGGACAATATGGAGGAG+GGG | + | chr1_1:54712174-54712193 | None:intergenic | 50.0% | |
| !! | AAACTCAAGTTGGGTGGCGT+TGG | - | chr1_1:54712517-54712536 | Msa0029360:CDS | 50.0% |
| ! | GGTGGTGATGTAAGAGACCT+TGG | - | chr1_1:54712884-54712903 | Msa0029360:intron | 50.0% |
| TTCCACTCTCCTACTTCTCC+TGG | - | chr1_1:54712932-54712951 | Msa0029360:intron | 50.0% | |
| TACCAGGAGAAGTAGGAGAG+TGG | + | chr1_1:54712937-54712956 | None:intergenic | 50.0% | |
| !! | CTAGAGTGCTTTGGGGGTAT+TGG | - | chr1_1:54713338-54713357 | Msa0029360:intron | 50.0% |
| !!! | GGGGTATTGGTGGAACCTTT+TGG | - | chr1_1:54713351-54713370 | Msa0029360:intron | 50.0% |
| CAAGTATGTGAGTGGGGGAT+GGG | + | chr1_1:54713381-54713400 | None:intergenic | 50.0% | |
| TCAAGTATGTGAGTGGGGGA+TGG | + | chr1_1:54713382-54713401 | None:intergenic | 50.0% | |
| TTGAATCTTGAGAGGGTGGG+TGG | - | chr1_1:54713475-54713494 | Msa0029360:intron | 50.0% | |
| ! | TGGTTCTGCAGAACCAGAGA+AGG | - | chr1_1:54713917-54713936 | Msa0029360:CDS | 50.0% |
| TCTGCAGAACCAGAGAAGGA+TGG | - | chr1_1:54713921-54713940 | Msa0029360:CDS | 50.0% | |
| TTCTGCAGAACCGGAGGAAT+TGG | + | chr1_1:54714036-54714055 | None:intergenic | 50.0% | |
| !! | CTTCTCTGGTTCTGCAGAAC+CGG | + | chr1_1:54713919-54713938 | None:intergenic | 50.0% |
| TCTGCAGAACCAGAGAAGGA+TGG | - | chr1_1:54713921-54713940 | Msa0029360:CDS | 50.0% | |
| TCTTCAGTGACAGGTACTCG+TGG | + | chr1_1:54714116-54714135 | None:intergenic | 50.0% | |
| TCCCCAAAGTCTTCAGTGAC+AGG | + | chr1_1:54714125-54714144 | None:intergenic | 50.0% | |
| ! | GTCACTGAAGACTTTGGGGA+CGG | - | chr1_1:54714125-54714144 | Msa0029360:intron | 50.0% |
| ! | GGTTTGGCATCCGATTTGTC+AGG | - | chr1_1:54714149-54714168 | Msa0029360:intron | 50.0% |
| ! | CATCCGATTTGTCAGGACCT+GGG | - | chr1_1:54714156-54714175 | Msa0029360:intron | 50.0% |
| ! | ATCCGATTTGTCAGGACCTG+GGG | - | chr1_1:54714157-54714176 | Msa0029360:intron | 50.0% |
| GAAGGATCATGGACCTGAGA+AGG | - | chr1_1:54714187-54714206 | Msa0029360:intron | 50.0% | |
| GATCATGGACCTGAGAAGGA+CGG | - | chr1_1:54714191-54714210 | Msa0029360:intron | 50.0% | |
| GACTGGATATGACAGCACGA+GGG | + | chr1_1:54714268-54714287 | None:intergenic | 50.0% | |
| TCTTGCGTCCGGAGGAATAT+CGG | + | chr1_1:54715341-54715360 | None:intergenic | 50.0% | |
| !! | AAGCAACAAGGCATTGCCTG+AGG | - | chr1_1:54715621-54715640 | Msa0029360:five_prime_UTR | 50.0% |
| GACAATATGGAGGAGGGGGA+AGG | + | chr1_1:54712169-54712188 | None:intergenic | 55.0% | |
| TGGGGACAATATGGAGGAGG+GGG | + | chr1_1:54712173-54712192 | None:intergenic | 55.0% | |
| !! | GTTGGGTGGCGTTGGTCAAA+AGG | - | chr1_1:54712525-54712544 | Msa0029360:CDS | 55.0% |
| ! | ATAATGGCGTGTGAAGGCGC+AGG | - | chr1_1:54712555-54712574 | Msa0029360:intron | 55.0% |
| !! | GAGTGCTTTGGGGGTATTGG+TGG | - | chr1_1:54713341-54713360 | Msa0029360:intron | 55.0% |
| TGGGGGATGGGAGAACCAAA+AGG | + | chr1_1:54713369-54713388 | None:intergenic | 55.0% | |
| AGAGGGTGGGTGGTAACTGT+TGG | - | chr1_1:54713485-54713504 | Msa0029360:CDS | 55.0% | |
| !! | CTCTGGTTCTGCAGAACCAG+AGG | + | chr1_1:54713914-54713933 | None:intergenic | 55.0% |
| CGGTTCTGCAGAACCAGAGA+AGG | - | chr1_1:54714043-54714062 | Msa0029360:intron | 55.0% | |
| ! | ACTGAAGACTTTGGGGACGG+CGG | - | chr1_1:54714128-54714147 | Msa0029360:intron | 55.0% |
| ! | GCATCCGATTTGTCAGGACC+TGG | - | chr1_1:54714155-54714174 | Msa0029360:intron | 55.0% |
| ! | TCCGATTTGTCAGGACCTGG+GGG | - | chr1_1:54714158-54714177 | Msa0029360:intron | 55.0% |
| TCCCCCAGGTCCTGACAAAT+CGG | + | chr1_1:54714162-54714181 | None:intergenic | 55.0% | |
| TGATCCTTCTCTAGTCCCCC+AGG | + | chr1_1:54714176-54714195 | None:intergenic | 55.0% | |
| GGGGGACTAGAGAAGGATCA+TGG | - | chr1_1:54714176-54714195 | Msa0029360:intron | 55.0% | |
| GGACTGGATATGACAGCACG+AGG | + | chr1_1:54714269-54714288 | None:intergenic | 55.0% | |
| CGTGCTGTCATATCCAGTCC+TGG | - | chr1_1:54714269-54714288 | Msa0029360:intron | 55.0% | |
| ! | GTGGATTTTCTTGCGTCCGG+AGG | + | chr1_1:54715349-54715368 | None:intergenic | 55.0% |
| !! | CTCTGGTTCTGCAGAACCGG+AGG | + | chr1_1:54714042-54714061 | None:intergenic | 60.0% |
| ! | AGACTTTGGGGACGGCGGTT+TGG | - | chr1_1:54714133-54714152 | Msa0029360:intron | 60.0% |
| AGGACCTGGGGGACTAGAGA+AGG | - | chr1_1:54714169-54714188 | Msa0029360:intron | 60.0% | |
| ! | ACAGCACGAGGGCGTGGAAT+TGG | + | chr1_1:54714257-54714276 | None:intergenic | 60.0% |
| GATATGACAGCACGAGGGCG+TGG | + | chr1_1:54714263-54714282 | None:intergenic | 60.0% | |
| ! | GGCGTGTGAAGGCGCAGGAA+AGG | - | chr1_1:54712560-54712579 | Msa0029360:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 54712032 | 54715741 | 54712032 | ID=Msa0029360;Name=Msa0029360 |
| chr1_1 | mRNA | 54712032 | 54715741 | 54712032 | ID=Msa0029360-mRNA-1;Parent=Msa0029360;Name=Msa0029360-mRNA-1;_AED=0.12;_eAED=0.12;_QI=311|1|1|1|0.75|0.8|5|273|293 |
| chr1_1 | exon | 54712032 | 54712561 | 54712032 | ID=Msa0029360-mRNA-1:exon:16339;Parent=Msa0029360-mRNA-1 |
| chr1_1 | exon | 54713483 | 54713986 | 54713483 | ID=Msa0029360-mRNA-1:exon:16338;Parent=Msa0029360-mRNA-1 |
| chr1_1 | exon | 54714820 | 54714939 | 54714820 | ID=Msa0029360-mRNA-1:exon:16337;Parent=Msa0029360-mRNA-1 |
| chr1_1 | exon | 54715032 | 54715068 | 54715032 | ID=Msa0029360-mRNA-1:exon:16336;Parent=Msa0029360-mRNA-1 |
| chr1_1 | exon | 54715467 | 54715741 | 54715467 | ID=Msa0029360-mRNA-1:exon:16335;Parent=Msa0029360-mRNA-1 |
| chr1_1 | five_prime_UTR | 54715467 | 54715741 | 54715467 | ID=Msa0029360-mRNA-1:five_prime_utr;Parent=Msa0029360-mRNA-1 |
| chr1_1 | five_prime_UTR | 54715033 | 54715068 | 54715033 | ID=Msa0029360-mRNA-1:five_prime_utr;Parent=Msa0029360-mRNA-1 |
| chr1_1 | CDS | 54715032 | 54715032 | 54715032 | ID=Msa0029360-mRNA-1:cds;Parent=Msa0029360-mRNA-1 |
| chr1_1 | CDS | 54714820 | 54714939 | 54714820 | ID=Msa0029360-mRNA-1:cds;Parent=Msa0029360-mRNA-1 |
| chr1_1 | CDS | 54713483 | 54713986 | 54713483 | ID=Msa0029360-mRNA-1:cds;Parent=Msa0029360-mRNA-1 |
| chr1_1 | CDS | 54712305 | 54712561 | 54712305 | ID=Msa0029360-mRNA-1:cds;Parent=Msa0029360-mRNA-1 |
| chr1_1 | three_prime_UTR | 54712032 | 54712304 | 54712032 | ID=Msa0029360-mRNA-1:three_prime_utr;Parent=Msa0029360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
