AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1252210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252210 MtrunA17_Chr8g0368501 89.446 578 31 3 1 552 1 574 0.0 1034
Msa1252210 MtrunA17_Chr8g0390131 43.939 528 228 13 30 505 12 523 3.66e-128 389
Msa1252210 MtrunA17_Chr7g0246441 36.740 362 167 8 48 379 40 369 4.37e-64 215
Msa1252210 MtrunA17_Chr0c01g0489491 38.944 303 119 8 106 375 54 323 3.11e-59 199
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252210 AT1G23400.1 56.477 579 184 11 16 551 11 564 0.0 597
Msa1252210 AT2G20020.1 52.846 369 133 5 69 400 102 466 1.43e-124 382
Msa1252210 AT4G31010.1 37.380 313 146 7 97 379 75 367 2.18e-61 208
Msa1252210 AT4G31010.2 36.562 320 146 8 97 379 75 374 2.75e-58 200
Msa1252210 AT5G54890.1 36.364 308 132 8 101 376 73 348 2.99e-56 193

Find 189 sgRNAs with CRISPR-Local

Find 542 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGATGGGTTTGTAGTATT+TGG 0.197870 8_2:-49044925 None:intergenic
TGAAATGCCGGGGCCGTTTC+CGG 0.203657 8_2:+49045232 Msa1252210:CDS
TTTGGGTTTGGTGGTGGTGG+GGG 0.227054 8_2:-49044876 None:intergenic
GGGTTTGGGTTTGGTGGTGG+TGG 0.231278 8_2:-49044879 None:intergenic
ATAGCAATTGGTTTCACTTT+TGG 0.233655 8_2:-49045062 None:intergenic
ATTAAATTCTTCTAGCAATA+AGG 0.245101 8_2:-49051025 None:intergenic
TCAGCTTTCGTTAATCCTTC+TGG 0.253371 8_2:-49048106 None:intergenic
GGAGCATCTTGTATAAGTTT+TGG 0.254544 8_2:-49048085 None:intergenic
AATATAACAAATTTGAGTTT+TGG 0.278459 8_2:+49051544 Msa1252210:three_prime_UTR
TGGTGTTTGAGGGCGGGGTT+TGG 0.293090 8_2:-49044894 None:intergenic
TTGTTGCCAATATGTAAATT+AGG 0.293580 8_2:+49048160 Msa1252210:CDS
TTGGGTTTGGTGGTGGTGGG+GGG 0.293803 8_2:-49044875 None:intergenic
GTTTGGGTTTGGTGGTGGTG+GGG 0.296186 8_2:-49044877 None:intergenic
GAGATTAACTTGGCGATTAT+CGG 0.301688 8_2:-49045351 None:intergenic
AGGGCGGGGTTTGGGTTTGG+TGG 0.307637 8_2:-49044885 None:intergenic
GCGGGGTTTGGGTTTGGTGG+TGG 0.309665 8_2:-49044882 None:intergenic
TTGAGGGCGGGGTTTGGGTT+TGG 0.324821 8_2:-49044888 None:intergenic
ACCAATTTCAAACCTCAATA+TGG 0.325004 8_2:-49046138 None:intergenic
GGTGTTTGAGGGCGGGGTTT+GGG 0.325373 8_2:-49044893 None:intergenic
ACAAGGGATTTAGAAAATAA+AGG 0.326497 8_2:+49050131 Msa1252210:CDS
GGTTTGGGTTTGGTGGTGGT+GGG 0.326513 8_2:-49044878 None:intergenic
GGGTGTGATTTGCGAGGTGG+GGG 0.330023 8_2:-49044855 None:intergenic
GATGGTAGTGGGGTGGGTGA+TGG 0.332999 8_2:-49044940 None:intergenic
ATGATGAACAAGTACTGATT+TGG 0.334584 8_2:+49050042 Msa1252210:CDS
AAGCTGAAGCAGTTGAATTA+AGG 0.343924 8_2:+49048122 Msa1252210:CDS
GGGGTGTGATTTGCGAGGTG+GGG 0.350623 8_2:-49044856 None:intergenic
GGAGGAAGATGAGGGGTTGT+TGG 0.353174 8_2:-49044781 None:intergenic
TGGTTACCTAATTTACATAT+TGG 0.355567 8_2:-49048166 None:intergenic
TTGCTAGAAGAATTTAATAT+TGG 0.361124 8_2:+49051030 Msa1252210:CDS
TTAACACCTTTCATCCCTTC+CGG 0.362703 8_2:-49045203 None:intergenic
GGGGATAGGCGGACGTGGGG+TGG 0.362867 8_2:-49044820 None:intergenic
TCTCTACTCACCCCTTCTTC+AGG 0.366333 8_2:-49045266 None:intergenic
ATGGTAGTGGGGTGGGTGAT+GGG 0.374597 8_2:-49044939 None:intergenic
GTCCACGGCCTCGGCATTGT+GGG 0.376828 8_2:-49045116 None:intergenic
AGGTGTTCCTACCGTTGATA+TGG 0.377777 8_2:+49046102 Msa1252210:CDS
TGGCGATTATCGGCCATCAT+AGG 0.381412 8_2:-49045341 None:intergenic
GGAATGGGGATAGGCGGACG+TGG 0.382151 8_2:-49044825 None:intergenic
TATTGGTCCTGATGCTCTCT+TGG 0.385503 8_2:+49051047 Msa1252210:CDS
TTGCGGTGGTGTTTGAGGGC+GGG 0.388136 8_2:-49044900 None:intergenic
CGGACGTGGGGTGGCGGATG+AGG 0.388801 8_2:-49044811 None:intergenic
TGCCGGGGCCGTTTCCGGTT+GGG 0.392027 8_2:+49045237 Msa1252210:CDS
CTCTCCCCTCCCAGCTGGTA+GGG 0.395636 8_2:+49044734 Msa1252210:CDS
TCCGTCATCATCGGCGAATC+CGG 0.401075 8_2:+49044981 Msa1252210:CDS
GATAGGCGGACGTGGGGTGG+CGG 0.403490 8_2:-49044817 None:intergenic
TGCGGTGGTGTTTGAGGGCG+GGG 0.403982 8_2:-49044899 None:intergenic
TGATTTGGAGGGGCAAAGAT+TGG 0.403995 8_2:+49050057 Msa1252210:CDS
CGGAGGAAGGGATGGTAGTG+GGG 0.406629 8_2:-49044950 None:intergenic
GAGGAAGATGAGGGGTTGTT+GGG 0.409398 8_2:-49044780 None:intergenic
TGAAACTCGAAGGGAGCTCC+AGG 0.410584 8_2:-49045020 None:intergenic
GCCGGTTCACGGATAGCAAT+TGG 0.410726 8_2:-49045074 None:intergenic
TGAGGGGTTGTTGGGTGGTA+AGG 0.412526 8_2:-49044772 None:intergenic
TTCATAGAACATAATAAAAC+AGG 0.412810 8_2:+49049879 Msa1252210:intron
AGGAAGGGATGGTAGTGGGG+TGG 0.417377 8_2:-49044947 None:intergenic
GGAGTTGCGGTGGTGTTTGA+GGG 0.421599 8_2:-49044904 None:intergenic
TGTCCACGGCCTCGGCATTG+TGG 0.423682 8_2:-49045117 None:intergenic
GCTTTCCCTGTCCACGGCCT+CGG 0.427017 8_2:-49045125 None:intergenic
TCGGAGGAAGGGATGGTAGT+GGG 0.427321 8_2:-49044951 None:intergenic
GGGTATTTGGGAATGGGGAT+AGG 0.428680 8_2:-49044834 None:intergenic
GTCGGAGGAAGGGATGGTAG+TGG 0.428850 8_2:-49044952 None:intergenic
TGTCTTGTGTACCATCTTGA+AGG 0.430898 8_2:-49051170 None:intergenic
AAATCAACTGGTAGCGATCC+AGG 0.435156 8_2:-49051318 None:intergenic
ACCTTCTCCAAGAGAGCATC+AGG 0.436156 8_2:-49051054 None:intergenic
AGATACTTGGTGAGCCGCTT+AGG 0.436303 8_2:+49045291 Msa1252210:CDS
GATGAGGAGGAGGAAGATGA+GGG 0.436533 8_2:-49044789 None:intergenic
CACAGTATCCAGTGATGCTC+TGG 0.436749 8_2:+49048041 Msa1252210:CDS
CCTCTCCCCTCCCAGCTGGT+AGG 0.437628 8_2:+49044733 Msa1252210:CDS
TCTCCCCTCCCAGCTGGTAG+GGG 0.439404 8_2:+49044735 Msa1252210:CDS
TGGGGTGGCGGATGAGGATG+AGG 0.442653 8_2:-49044805 None:intergenic
CTCCCACAATGCCGAGGCCG+TGG 0.446187 8_2:+49045114 Msa1252210:CDS
GGAGAAGGTAGAAGAATTTG+AGG 0.446433 8_2:+49051068 Msa1252210:CDS
GGCGGATGAGGATGAGGAGG+AGG 0.447612 8_2:-49044799 None:intergenic
GTTGGGAAGTTTCCTGAAGA+AGG 0.448522 8_2:+49045254 Msa1252210:CDS
ACCAATTGCTATCCGTGAAC+CGG 0.450005 8_2:+49045073 Msa1252210:CDS
CCTTTCATCCCTTCCGGAGG+AGG 0.450761 8_2:-49045197 None:intergenic
GCTGGCTTCCAGAGCATCAC+TGG 0.454686 8_2:-49048049 None:intergenic
CATAATCATCAGCATCATCT+AGG 0.454816 8_2:-49051209 None:intergenic
CCAACTCACCGAGATTAACT+TGG 0.455660 8_2:-49045361 None:intergenic
ACAATGCCGAGGCCGTGGAC+AGG 0.457243 8_2:+49045119 Msa1252210:CDS
GGATGAGGAGGAGGAAGATG+AGG 0.457647 8_2:-49044790 None:intergenic
ATCTAAGCACATCAGCGAAA+TGG 0.458108 8_2:+49050945 Msa1252210:CDS
TGGAGTTGCGGTGGTGTTTG+AGG 0.464560 8_2:-49044905 None:intergenic
TCTTCAGGAAACTTCCCAAC+CGG 0.465046 8_2:-49045251 None:intergenic
GGTGTGATTTGCGAGGTGGG+GGG 0.465880 8_2:-49044854 None:intergenic
GGAAACTTCCCAACCGGAAA+CGG 0.466951 8_2:-49045245 None:intergenic
GGAAGGGATGGTAGTGGGGT+GGG 0.469596 8_2:-49044946 None:intergenic
AATGGGGATAGGCGGACGTG+GGG 0.471172 8_2:-49044823 None:intergenic
GCAGTTGAATTAAGGATGAA+AGG 0.471978 8_2:+49048130 Msa1252210:CDS
GATGATGACGGAGCGGTTGT+CGG 0.474703 8_2:-49044970 None:intergenic
CACCATGGATAGGTGTTTCA+AGG 0.476210 8_2:-49044697 None:intergenic
TTTGATGGTGTAGGAAGGGA+TGG 0.476690 8_2:+49046007 Msa1252210:intron
CTGCTGAAGCTACCATTACA+AGG 0.479834 8_2:+49050114 Msa1252210:CDS
TTCCCAACCGGAAACGGCCC+CGG 0.479889 8_2:-49045239 None:intergenic
TTTGGATAAACAGGAGCAGC+TGG 0.481573 8_2:-49048067 None:intergenic
GGTGGCGGATGAGGATGAGG+AGG 0.483156 8_2:-49044802 None:intergenic
CGGTGAGTTTAATGATATAG+TGG 0.484106 8_2:+49051281 Msa1252210:CDS
GTGAGTAGAGAGGAGATACT+TGG 0.489608 8_2:+49045278 Msa1252210:CDS
GGCGTCTCCTACCTTCTCCC+TGG 0.492972 8_2:+49045002 Msa1252210:CDS
ATGCCGGGGCCGTTTCCGGT+TGG 0.495232 8_2:+49045236 Msa1252210:CDS
TTATCCTCTCCCCTCCCAGC+TGG 0.498105 8_2:+49044729 Msa1252210:CDS
GTCTGCAAAATTCGTTGTAA+AGG 0.499846 8_2:+49046082 Msa1252210:CDS
GGCATTGTGGGAGGTTCAAA+CGG 0.500096 8_2:-49045104 None:intergenic
GTTGCGGTGGTGTTTGAGGG+CGG 0.500745 8_2:-49044901 None:intergenic
TTATCAACAAGCAAATCAAC+TGG 0.501371 8_2:-49051330 None:intergenic
CGAAGGGAGCTCCAGGGAGA+AGG 0.502185 8_2:-49045013 None:intergenic
TAATGTTTGCCGCCATATTG+AGG 0.502809 8_2:+49046126 Msa1252210:CDS
CAATGCCGAGGCCGTGGACA+GGG 0.503686 8_2:+49045120 Msa1252210:CDS
CTCCCCTCCCAGCTGGTAGG+GGG 0.503818 8_2:+49044736 Msa1252210:CDS
TGTGTAAATTAGCAAATAGC+TGG 0.506946 8_2:+49051416 Msa1252210:three_prime_UTR
TGAAGAAGTAAATGCTGGAT+AGG 0.509878 8_2:-49051115 None:intergenic
TAAGCTCAAACTAAGACAAA+AGG 0.509879 8_2:+49051350 Msa1252210:CDS
TTGGTGAGCCGCTTAGGAAG+TGG 0.514303 8_2:+49045297 Msa1252210:CDS
TTGGGAAGTTTCCTGAAGAA+GGG 0.515141 8_2:+49045255 Msa1252210:CDS
CAGTTGAATTAAGGATGAAA+GGG 0.515361 8_2:+49048131 Msa1252210:CDS
GAGAAGGTAGAAGAATTTGA+GGG 0.515767 8_2:+49051069 Msa1252210:CDS
TATTTGGGAATGGGGATAGG+CGG 0.516818 8_2:-49044831 None:intergenic
GGGGTTGTTGGGTGGTAAGG+AGG 0.521292 8_2:-49044769 None:intergenic
ACGGAGCGGTTGTCGGAGGA+AGG 0.523999 8_2:-49044963 None:intergenic
TCAAATTTATACCTTCAAGA+TGG 0.526114 8_2:+49051159 Msa1252210:CDS
TGACTTGAAGAAGTAAATGC+TGG 0.526846 8_2:-49051120 None:intergenic
CTGTCATGACAGGAGAAAGC+AGG 0.528302 8_2:+49047944 Msa1252210:intron
CTTGTAATGGTAGCTTCAGC+AGG 0.533302 8_2:-49050113 None:intergenic
TTCTTCTTCGACTTCTTCAA+CGG 0.537275 8_2:-49045149 None:intergenic
TCGTTTAATCCTCCTCCGGA+AGG 0.538069 8_2:+49045188 Msa1252210:CDS
TGTTAAGAAAGTTGAAATGC+CGG 0.538229 8_2:+49045220 Msa1252210:CDS
CTGGATACTGTGGACGAGTA+CGG 0.540010 8_2:-49048030 None:intergenic
ATGAACAAGTACTGATTTGG+AGG 0.541398 8_2:+49050045 Msa1252210:CDS
TGATTCGTTTAATCCTCCTC+CGG 0.541927 8_2:+49045184 Msa1252210:CDS
GTGGATACATCAGCTGAACC+TGG 0.543194 8_2:+49051300 Msa1252210:CDS
GAATGGGGATAGGCGGACGT+GGG 0.543453 8_2:-49044824 None:intergenic
TCCTGATGCTCTCTTGGAGA+AGG 0.544608 8_2:+49051053 Msa1252210:CDS
CACGGCCTCGGCATTGTGGG+AGG 0.545118 8_2:-49045113 None:intergenic
GACAACCGCTCCGTCATCAT+CGG 0.550089 8_2:+49044972 Msa1252210:CDS
CCTCCTCCGGAAGGGATGAA+AGG 0.553704 8_2:+49045197 Msa1252210:CDS
GTTAAGAAAGTTGAAATGCC+GGG 0.557025 8_2:+49045221 Msa1252210:CDS
AACGGAGCTTTCCCTGTCCA+CGG 0.560888 8_2:-49045131 None:intergenic
TGGGTGGTAAGGAGGAGAAG+AGG 0.564932 8_2:-49044761 None:intergenic
GCGGTTGTCGGAGGAAGGGA+TGG 0.565134 8_2:-49044958 None:intergenic
ATGAGGAGGAGGAAGATGAG+GGG 0.571680 8_2:-49044788 None:intergenic
GGGAGCTCCAGGGAGAAGGT+AGG 0.573674 8_2:-49045009 None:intergenic
CCTACCAGCTGGGAGGGGAG+AGG 0.577642 8_2:-49044733 None:intergenic
CGTTTAATCCTCCTCCGGAA+GGG 0.578528 8_2:+49045189 Msa1252210:CDS
TGGTGAGCCGCTTAGGAAGT+GGG 0.580240 8_2:+49045298 Msa1252210:CDS
GCCGGATTCGCCGATGATGA+CGG 0.582513 8_2:-49044982 None:intergenic
TGGATTAACGCATAACATGT+TGG 0.584391 8_2:+49046027 Msa1252210:CDS
CAAGACAACTATTCAAGTGA+TGG 0.590922 8_2:+49051186 Msa1252210:CDS
GGGAAAATAATTCATCGAGC+TGG 0.592781 8_2:+49047968 Msa1252210:CDS
GGTAGTTGTAATTTCTGCCA+CGG 0.594943 8_2:-49048009 None:intergenic
CGGAGCGGTTGTCGGAGGAA+GGG 0.596973 8_2:-49044962 None:intergenic
CACCTTGAAACACCTATCCA+TGG 0.597038 8_2:+49044695 Msa1252210:exon
GAAGATGAGGGGTTGTTGGG+TGG 0.597152 8_2:-49044777 None:intergenic
AAAATAATTCATCGAGCTGG+CGG 0.598507 8_2:+49047971 Msa1252210:CDS
TGGAGTTGATACATTCACAT+TGG 0.599029 8_2:+49046047 Msa1252210:CDS
GTTTGTAGTATTTGGAGTTG+CGG 0.601763 8_2:-49044917 None:intergenic
AGGGAGAAGGTAGGAGACGC+CGG 0.602148 8_2:-49045000 None:intergenic
ATGCAACTAGCACCATGGAT+AGG 0.602321 8_2:-49044707 None:intergenic
TGGGAAGTTTCCTGAAGAAG+GGG 0.603738 8_2:+49045256 Msa1252210:CDS
ACATTGTTAATCAGGTGAGG+TGG 0.605237 8_2:+49050912 Msa1252210:intron
TGAAGAAGGGGTGAGTAGAG+AGG 0.605646 8_2:+49045268 Msa1252210:CDS
TGTCATGACAGGAGAAAGCA+GGG 0.606267 8_2:+49047945 Msa1252210:intron
CTTATACAAGATGCTCCAGA+AGG 0.609269 8_2:+49048091 Msa1252210:CDS
GTAACTGAACTGAAACTCGA+AGG 0.612467 8_2:-49045030 None:intergenic
TGTAGTATTTGGAGTTGCGG+TGG 0.615830 8_2:-49044914 None:intergenic
AATGCTTGTTAAGCCTATGA+TGG 0.616220 8_2:+49045328 Msa1252210:CDS
ACATTATCCATATCAACGGT+AGG 0.616575 8_2:-49046109 None:intergenic
GATAATCGCCAAGTTAATCT+CGG 0.621259 8_2:+49045353 Msa1252210:CDS
GATGACGGAGCGGTTGTCGG+AGG 0.622037 8_2:-49044967 None:intergenic
TAACTGAACTGAAACTCGAA+GGG 0.632131 8_2:-49045029 None:intergenic
GCAAACATTATCCATATCAA+CGG 0.633398 8_2:-49046113 None:intergenic
TGCACCTCCCACTTCCTAAG+CGG 0.633631 8_2:-49045305 None:intergenic
TCATGACAGGAGAAAGCAGG+GGG 0.635654 8_2:+49047947 Msa1252210:intron
TTGAACCTCCCACAATGCCG+AGG 0.638283 8_2:+49045108 Msa1252210:CDS
GATTACTACAATGACGAAGA+CGG 0.640281 8_2:+49051261 Msa1252210:CDS
TCGAAAGACAATAGCACACA+AGG 0.641203 8_2:-49050020 None:intergenic
TGAACAAGTACTGATTTGGA+GGG 0.645497 8_2:+49050046 Msa1252210:CDS
GTAATGGTAGCTTCAGCAGG+AGG 0.648130 8_2:-49050110 None:intergenic
ACACCTTTCATCCCTTCCGG+AGG 0.653893 8_2:-49045200 None:intergenic
CAGAGCATCACTGGATACTG+TGG 0.656560 8_2:-49048040 None:intergenic
TGCTGAAGCTACCATTACAA+GGG 0.658377 8_2:+49050115 Msa1252210:CDS
GAACAAGTACTGATTTGGAG+GGG 0.660461 8_2:+49050047 Msa1252210:CDS
TTAAGAAAGTTGAAATGCCG+GGG 0.666363 8_2:+49045222 Msa1252210:CDS
GAAACTCGAAGGGAGCTCCA+GGG 0.672773 8_2:-49045019 None:intergenic
GGATAATGCAACTAGCACCA+TGG 0.688445 8_2:-49044712 None:intergenic
AATTTCAAACCTCAATATGG+CGG 0.689711 8_2:-49046135 None:intergenic
GTCATGACAGGAGAAAGCAG+GGG 0.723892 8_2:+49047946 Msa1252210:intron
TGAGCCGCTTAGGAAGTGGG+AGG 0.725065 8_2:+49045301 Msa1252210:CDS
GGATTAAACGAATCAAACAG+CGG 0.734775 8_2:-49045176 None:intergenic
ATTCGCCGATGATGACGGAG+CGG 0.738752 8_2:-49044977 None:intergenic
TGCTGGATAGGAGTGCTCTG+TGG 0.761532 8_2:-49051103 None:intergenic
CATGACAGGAGAAAGCAGGG+GGG 0.794713 8_2:+49047948 Msa1252210:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATGACTAAAATTAT+TGG - chr8_2:49046653-49046672 None:intergenic 10.0%
!! ACATTAAATTTATTACATAA+AGG + chr8_2:49049461-49049480 Msa1252210:intron 10.0%
!! CATTAAATTTATTACATAAA+GGG + chr8_2:49049462-49049481 Msa1252210:intron 10.0%
!! ATTAAATTTATTACATAAAG+GGG + chr8_2:49049463-49049482 Msa1252210:intron 10.0%
!!! TTTTTATATATTTCTTTGTA+TGG + chr8_2:49050427-49050446 Msa1252210:intron 10.0%
!!! TATATCTATCTATTCTAAAA+TGG - chr8_2:49045933-49045952 None:intergenic 15.0%
!! AAATATTTATTCCTAATAGA+TGG + chr8_2:49047150-49047169 Msa1252210:intron 15.0%
!!! ATTTAGGTTTAGTATTTAAA+AGG + chr8_2:49048310-49048329 Msa1252210:intron 15.0%
!!! TTTAGGTTTAGTATTTAAAA+GGG + chr8_2:49048311-49048330 Msa1252210:intron 15.0%
!!! ATGGTCAAATTTTTTTATTT+GGG - chr8_2:49048421-49048440 None:intergenic 15.0%
!!! TATGGTCAAATTTTTTTATT+TGG - chr8_2:49048422-49048441 None:intergenic 15.0%
!!! ATTTAGGTTTAGTATTTAAA+AGG + chr8_2:49048310-49048329 Msa1252210:intron 15.0%
!!! TTTAGGTTTAGTATTTAAAA+GGG + chr8_2:49048311-49048330 Msa1252210:intron 15.0%
!!! ATGGTCAAATTTTTTTATTT+GGG - chr8_2:49048421-49048440 None:intergenic 15.0%
!!! TATGGTCAAATTTTTTTATT+TGG - chr8_2:49048422-49048441 None:intergenic 15.0%
!! ATAATCAAAATCATGTAAAA+TGG + chr8_2:49048912-49048931 Msa1252210:intron 15.0%
!! TAATCAAAATCATGTAAAAT+GGG + chr8_2:49048913-49048932 Msa1252210:intron 15.0%
!!! ATATCAAAATTATTTAGTTC+AGG - chr8_2:49049292-49049311 None:intergenic 15.0%
!! TTAAATTTATTACATAAAGG+GGG + chr8_2:49049464-49049483 Msa1252210:intron 15.0%
!! ATATAGAAAATGATATATCT+TGG - chr8_2:49049680-49049699 None:intergenic 15.0%
!!! TATATTTTGTGTTTACAATA+AGG + chr8_2:49050297-49050316 Msa1252210:intron 15.0%
!! ATATCTGGTAAATATATAAT+TGG + chr8_2:49050853-49050872 Msa1252210:intron 15.0%
!!! TTGAATGTAATCACATTTTT+CGG + chr8_2:49045568-49045587 Msa1252210:intron 20.0%
!! TCCATTTCTCAAATTATTAT+TGG + chr8_2:49045687-49045706 Msa1252210:intron 20.0%
!! ACCAATAATAATTTGAGAAA+TGG - chr8_2:49045691-49045710 None:intergenic 20.0%
!! ACATAAAAATCGCTATATAA+TGG + chr8_2:49045811-49045830 Msa1252210:intron 20.0%
!!! TTAGTCATTTTGTTATGATA+TGG - chr8_2:49046581-49046600 None:intergenic 20.0%
!! ATTATAATCAACATCCAATT+TGG + chr8_2:49046974-49046993 Msa1252210:intron 20.0%
!! TTAGGAATAAATATTTCAGA+CGG - chr8_2:49047146-49047165 None:intergenic 20.0%
!!! ACAATTTGCATACTTTTTTT+AGG - chr8_2:49047378-49047397 None:intergenic 20.0%
!!! TAAAAAAAGTATGCAAATTG+TGG + chr8_2:49047377-49047396 Msa1252210:intron 20.0%
!! ATAAAGTCTAAACAGAAAAT+GGG - chr8_2:49047722-49047741 None:intergenic 20.0%
!! TATAAAGTCTAAACAGAAAA+TGG - chr8_2:49047723-49047742 None:intergenic 20.0%
!! GATATCTAAAAGTTAATAGA+TGG - chr8_2:49048189-49048208 None:intergenic 20.0%
!! TTCCTTAGATTCAAATATTT+AGG + chr8_2:49048294-49048313 Msa1252210:intron 20.0%
!! AACCTAAATATTTGAATCTA+AGG - chr8_2:49048299-49048318 None:intergenic 20.0%
!!! AAATTTTTTTATTTGGGCAA+TGG - chr8_2:49048415-49048434 None:intergenic 20.0%
!! TTCCTTAGATTCAAATATTT+AGG + chr8_2:49048294-49048313 Msa1252210:intron 20.0%
!! AACCTAAATATTTGAATCTA+AGG - chr8_2:49048299-49048318 None:intergenic 20.0%
!!! AAATTTTTTTATTTGGGCAA+TGG - chr8_2:49048415-49048434 None:intergenic 20.0%
!!! AACATTATAAGAGTACTTTA+CGG - chr8_2:49048984-49049003 None:intergenic 20.0%
!! TTCATAGAACATAATAAAAC+AGG + chr8_2:49049879-49049898 Msa1252210:intron 20.0%
!!! TATTATCTAGTAGTCTTATA+CGG + chr8_2:49049959-49049978 Msa1252210:intron 20.0%
!! TGGAGTAAGAAAAAAAAAAT+TGG + chr8_2:49050161-49050180 Msa1252210:intron 20.0%
!! AGAATAAATCTTTCTATTCA+TGG - chr8_2:49050469-49050488 None:intergenic 20.0%
!! TTCCTTCAAAAAAAAAAGAT+AGG - chr8_2:49050784-49050803 None:intergenic 20.0%
!! CAATTATAACACAAACAAAT+AGG - chr8_2:49050817-49050836 None:intergenic 20.0%
!! CTATTTGTTTGTGTTATAAT+TGG + chr8_2:49050815-49050834 Msa1252210:intron 20.0%
!! TTTCTAATTCATATCATATC+TGG + chr8_2:49050838-49050857 Msa1252210:intron 20.0%
!!! ATATAATTGGTTGATAACAT+TGG + chr8_2:49050866-49050885 Msa1252210:intron 20.0%
!!! ATGATTTTACATTGTTAATC+AGG + chr8_2:49050904-49050923 Msa1252210:intron 20.0%
!! ATTAAATTCTTCTAGCAATA+AGG - chr8_2:49051028-49051047 None:intergenic 20.0%
!! TTGCTAGAAGAATTTAATAT+TGG + chr8_2:49051030-49051049 Msa1252210:CDS 20.0%
! TAGAACTTTATTCAAAACCT+TGG + chr8_2:49045849-49045868 Msa1252210:intron 25.0%
! GATAGATATATTGTGAATTG+TGG + chr8_2:49045943-49045962 Msa1252210:intron 25.0%
! TACATTGTCTTCAAGAAATA+AGG - chr8_2:49046433-49046452 None:intergenic 25.0%
! ACTAAAATTATTGGACTTTC+CGG - chr8_2:49046644-49046663 None:intergenic 25.0%
!!! TATTCTCTTTAGGATAGTTT+CGG + chr8_2:49046867-49046886 Msa1252210:intron 25.0%
! AATGTAGTTATGATGTAAGT+AGG - chr8_2:49047076-49047095 None:intergenic 25.0%
! TAGGAATAAATATTTCAGAC+GGG - chr8_2:49047145-49047164 None:intergenic 25.0%
! ATTCCTAATAGATGGTTTAT+TGG + chr8_2:49047158-49047177 Msa1252210:intron 25.0%
! AGAGATTATCAAAATCCAAA+GGG + chr8_2:49047427-49047446 Msa1252210:intron 25.0%
!!! TTCAAGTTGAATGTATTGTT+AGG + chr8_2:49047532-49047551 Msa1252210:intron 25.0%
!!! TCAAGTTGAATGTATTGTTA+GGG + chr8_2:49047533-49047552 Msa1252210:intron 25.0%
! TTCATTAGTTAGGTAAATAG+TGG + chr8_2:49047599-49047618 Msa1252210:intron 25.0%
! TCACAAGCTATAAATTATAC+GGG - chr8_2:49047648-49047667 None:intergenic 25.0%
! CTCACAAGCTATAAATTATA+CGG - chr8_2:49047649-49047668 None:intergenic 25.0%
! TAAAGTCTAAACAGAAAATG+GGG - chr8_2:49047721-49047740 None:intergenic 25.0%
! GATAGAAAGAATTAAAGGAT+GGG - chr8_2:49047769-49047788 None:intergenic 25.0%
! AGATAGAAAGAATTAAAGGA+TGG - chr8_2:49047770-49047789 None:intergenic 25.0%
! ATCCTTTAATTCTTTCTATC+TGG + chr8_2:49047769-49047788 Msa1252210:intron 25.0%
! TCCTTTAATTCTTTCTATCT+GGG + chr8_2:49047770-49047789 Msa1252210:intron 25.0%
!!! TGTATAAGTTTTGGATAAAC+AGG - chr8_2:49048079-49048098 None:intergenic 25.0%
! TTGTTGCCAATATGTAAATT+AGG + chr8_2:49048160-49048179 Msa1252210:CDS 25.0%
! TGGTTACCTAATTTACATAT+TGG - chr8_2:49048169-49048188 None:intergenic 25.0%
! TTGATATTGCATTCTACTTT+AGG + chr8_2:49049002-49049021 Msa1252210:intron 25.0%
! TGATATTGCATTCTACTTTA+GGG + chr8_2:49049003-49049022 Msa1252210:intron 25.0%
! CCTAATTTCTTATAATCACT+GGG - chr8_2:49049193-49049212 None:intergenic 25.0%
! ACCTAATTTCTTATAATCAC+TGG - chr8_2:49049194-49049213 None:intergenic 25.0%
! AGAATTAATTCAAAGTGTAG+AGG + chr8_2:49049334-49049353 Msa1252210:intron 25.0%
! GAATTAATTCAAAGTGTAGA+GGG + chr8_2:49049335-49049354 Msa1252210:intron 25.0%
! AGCTCTATCTTTAAATTTCA+AGG + chr8_2:49049602-49049621 Msa1252210:intron 25.0%
! AAATAATCATTCCTTGGTAA+GGG - chr8_2:49049630-49049649 None:intergenic 25.0%
! TATTTCACCATAAATTCTTC+TGG + chr8_2:49049645-49049664 Msa1252210:intron 25.0%
! AAAATGATATATCTTGGTAG+TGG - chr8_2:49049674-49049693 None:intergenic 25.0%
!! TTTTCTATATTACAGCTCTA+GGG + chr8_2:49049783-49049802 Msa1252210:intron 25.0%
! TACTACAACAAAATATGCTT+TGG + chr8_2:49049829-49049848 Msa1252210:intron 25.0%
! AATAATTGCAGCAATACTTA+AGG - chr8_2:49049943-49049962 None:intergenic 25.0%
!! ATTTTCTAAATCCCTTGTAA+TGG - chr8_2:49050129-49050148 None:intergenic 25.0%
! ACAAGGGATTTAGAAAATAA+AGG + chr8_2:49050131-49050150 Msa1252210:CDS 25.0%
!! TAGAAAATAAAGGTATGTGT+TGG + chr8_2:49050141-49050160 Msa1252210:intron 25.0%
! TTTGTGCTTAAAACAGAATA+GGG + chr8_2:49050356-49050375 Msa1252210:intron 25.0%
! TACATACAATGACAATTGTT+TGG + chr8_2:49050600-49050619 Msa1252210:intron 25.0%
! ACATACAATGACAATTGTTT+GGG + chr8_2:49050601-49050620 Msa1252210:intron 25.0%
! AACCTTTATAATGTGATGAT+GGG + chr8_2:49050624-49050643 Msa1252210:intron 25.0%
! TATATGATCATCTATGACAT+TGG - chr8_2:49050755-49050774 None:intergenic 25.0%
!!! AGCCTATCTTTTTTTTTTGA+AGG + chr8_2:49050779-49050798 Msa1252210:intron 25.0%
! TCAAATTTATACCTTCAAGA+TGG + chr8_2:49051159-49051178 Msa1252210:CDS 25.0%
!! ATAGCAATTGGTTTCACTTT+TGG - chr8_2:49045065-49045084 None:intergenic 30.0%
TGTTAAGAAAGTTGAAATGC+CGG + chr8_2:49045220-49045239 Msa1252210:CDS 30.0%
TGTTGTAAAAACAGAACACA+CGG - chr8_2:49045794-49045813 None:intergenic 30.0%
GATATATTGTGAATTGTGGA+AGG + chr8_2:49045947-49045966 Msa1252210:intron 30.0%
GCAAACATTATCCATATCAA+CGG - chr8_2:49046116-49046135 None:intergenic 30.0%
AATTTCAAACCTCAATATGG+CGG - chr8_2:49046138-49046157 None:intergenic 30.0%
ACCAATTTCAAACCTCAATA+TGG - chr8_2:49046141-49046160 None:intergenic 30.0%
! TTATGCAAGTGTTGTTATGT+TGG - chr8_2:49046198-49046217 None:intergenic 30.0%
CACTTGCATAATATCATTCT+TGG + chr8_2:49046207-49046226 Msa1252210:intron 30.0%
!!! TGTGCTAAGACTGTTTTTAA+TGG + chr8_2:49046298-49046317 Msa1252210:intron 30.0%
! ATGAATAGGATTTTCTGTAC+AGG - chr8_2:49046339-49046358 None:intergenic 30.0%
GTCAATTATCCATTTGTGAA+GGG - chr8_2:49046411-49046430 None:intergenic 30.0%
ATGTTTATATGAAGGATGGT+TGG - chr8_2:49046548-49046567 None:intergenic 30.0%
TGTTAGGCATGTTTATATGA+AGG - chr8_2:49046556-49046575 None:intergenic 30.0%
! TTGTTATGATATGGAGTGTT+AGG - chr8_2:49046572-49046591 None:intergenic 30.0%
TGTCATCAACCATTATTTGA+TGG + chr8_2:49046616-49046635 Msa1252210:intron 30.0%
!! TAGTTTTACAAAGTAGTCGA+TGG - chr8_2:49046690-49046709 None:intergenic 30.0%
CCTACTTATGTCATATACTA+CGG - chr8_2:49046799-49046818 None:intergenic 30.0%
CGTAGTATATGACATAAGTA+GGG + chr8_2:49046797-49046816 Msa1252210:intron 30.0%
GTAGTATATGACATAAGTAG+GGG + chr8_2:49046798-49046817 Msa1252210:intron 30.0%
TAGTATATGACATAAGTAGG+GGG + chr8_2:49046799-49046818 Msa1252210:intron 30.0%
TAATCAACATCCAATTTGGA+AGG + chr8_2:49046978-49046997 Msa1252210:intron 30.0%
AGTCCAATAAACCATCTATT+AGG - chr8_2:49047164-49047183 None:intergenic 30.0%
TCAAAGTGAAAGATTGGTAA+AGG - chr8_2:49047214-49047233 None:intergenic 30.0%
!! AATTCGGATTTTAGGAAGAA+TGG - chr8_2:49047237-49047256 None:intergenic 30.0%
!!! GCATACTTTTTTTAGGCAAT+GGG - chr8_2:49047371-49047390 None:intergenic 30.0%
!!! TGCATACTTTTTTTAGGCAA+TGG - chr8_2:49047372-49047391 None:intergenic 30.0%
GGCAAAAAATGAACAAGAAA+CGG + chr8_2:49047404-49047423 Msa1252210:intron 30.0%
GAGAGATTATCAAAATCCAA+AGG + chr8_2:49047426-49047445 Msa1252210:intron 30.0%
! TAAATAGTGGAAATCCGATT+GGG + chr8_2:49047612-49047631 Msa1252210:intron 30.0%
! ATTTATAGCTTGTGAGTGAA+AGG + chr8_2:49047653-49047672 Msa1252210:intron 30.0%
ACCCAGATAGAAAGAATTAA+AGG - chr8_2:49047774-49047793 None:intergenic 30.0%
CAACGAAATCTATATCTGTT+AGG - chr8_2:49047818-49047837 None:intergenic 30.0%
AATGTTTATACTGTCATGAC+AGG + chr8_2:49047934-49047953 Msa1252210:intron 30.0%
CAGTTGAATTAAGGATGAAA+GGG + chr8_2:49048131-49048150 Msa1252210:CDS 30.0%
GGTTTAGTATTTAAAAGGGT+TGG + chr8_2:49048315-49048334 Msa1252210:intron 30.0%
!!! AGATGCTTTTGACTTCTTAA+GGG + chr8_2:49048444-49048463 Msa1252210:intron 30.0%
GGTTTAGTATTTAAAAGGGT+TGG + chr8_2:49048315-49048334 Msa1252210:intron 30.0%
!!! AGATGCTTTTGACTTCTTAA+GGG + chr8_2:49048444-49048463 Msa1252210:intron 30.0%
GATATTGCATTCTACTTTAG+GGG + chr8_2:49049004-49049023 Msa1252210:intron 30.0%
GAACATCTCATTTATTTGTG+TGG + chr8_2:49049067-49049086 Msa1252210:intron 30.0%
! TGTTGTGTATACTCCATTTT+TGG - chr8_2:49049101-49049120 None:intergenic 30.0%
AGTATACACAACACTTGTAA+AGG + chr8_2:49049108-49049127 Msa1252210:intron 30.0%
CCCAGTGATTATAAGAAATT+AGG + chr8_2:49049190-49049209 Msa1252210:intron 30.0%
CAGAATAAATGTACATGCTT+AGG + chr8_2:49049382-49049401 Msa1252210:intron 30.0%
! GGTTCTGTAATTGATTAGTT+TGG + chr8_2:49049485-49049504 Msa1252210:intron 30.0%
! TTTTCATGTTTTCATCTCTC+TGG + chr8_2:49049559-49049578 Msa1252210:intron 30.0%
GAAATAATCATTCCTTGGTA+AGG - chr8_2:49049631-49049650 None:intergenic 30.0%
ATGGTGAAATAATCATTCCT+TGG - chr8_2:49049636-49049655 None:intergenic 30.0%
! CTTTTCTATATTACAGCTCT+AGG + chr8_2:49049782-49049801 Msa1252210:intron 30.0%
! GCAATTTGATCATTTTGCTT+TGG + chr8_2:49049985-49050004 Msa1252210:intron 30.0%
!! ATGATGAACAAGTACTGATT+TGG + chr8_2:49050042-49050061 Msa1252210:CDS 30.0%
TACTGTAGAAGAATTCCATT+CGG - chr8_2:49050221-49050240 None:intergenic 30.0%
TTATAAGCAATCTCGTATCT+AGG + chr8_2:49050323-49050342 Msa1252210:intron 30.0%
GTTTGTGCTTAAAACAGAAT+AGG + chr8_2:49050355-49050374 Msa1252210:intron 30.0%
TTGTGCTTAAAACAGAATAG+GGG + chr8_2:49050357-49050376 Msa1252210:intron 30.0%
CTTTGTATGGATTTCTTCTA+TGG + chr8_2:49050440-49050459 Msa1252210:intron 30.0%
TGGCTGAATTAGATTATAAG+TGG + chr8_2:49050549-49050568 Msa1252210:intron 30.0%
GAACCTTTATAATGTGATGA+TGG + chr8_2:49050623-49050642 Msa1252210:intron 30.0%
! ACCTTTATAATGTGATGATG+GGG + chr8_2:49050625-49050644 Msa1252210:intron 30.0%
TTTACATTGTTAATCAGGTG+AGG + chr8_2:49050909-49050928 Msa1252210:intron 30.0%
! TCCACAGAGATAACATTTTT+GGG - chr8_2:49050981-49051000 None:intergenic 30.0%
! TTCCACAGAGATAACATTTT+TGG - chr8_2:49050982-49051001 None:intergenic 30.0%
TTATCAACAAGCAAATCAAC+TGG - chr8_2:49051333-49051352 None:intergenic 30.0%
TAAGCTCAAACTAAGACAAA+AGG + chr8_2:49051350-49051369 Msa1252210:CDS 30.0%
TGTGTAAATTAGCAAATAGC+TGG + chr8_2:49051416-49051435 Msa1252210:three_prime_UTR 30.0%
! GTTTGTAGTATTTGGAGTTG+CGG - chr8_2:49044920-49044939 None:intergenic 35.0%
TAACTGAACTGAAACTCGAA+GGG - chr8_2:49045032-49045051 None:intergenic 35.0%
!!! TGGTTTCACTTTTGGAGTTT+CGG - chr8_2:49045057-49045076 None:intergenic 35.0%
TTCTTCTTCGACTTCTTCAA+CGG - chr8_2:49045152-49045171 None:intergenic 35.0%
GGATTAAACGAATCAAACAG+CGG - chr8_2:49045179-49045198 None:intergenic 35.0%
GTTAAGAAAGTTGAAATGCC+GGG + chr8_2:49045221-49045240 Msa1252210:CDS 35.0%
TTAAGAAAGTTGAAATGCCG+GGG + chr8_2:49045222-49045241 Msa1252210:CDS 35.0%
! AATGCTTGTTAAGCCTATGA+TGG + chr8_2:49045328-49045347 Msa1252210:CDS 35.0%
! GAGATTAACTTGGCGATTAT+CGG - chr8_2:49045354-49045373 None:intergenic 35.0%
GATAATCGCCAAGTTAATCT+CGG + chr8_2:49045353-49045372 Msa1252210:CDS 35.0%
ATGCCTTCAATCAGAAATGT+CGG - chr8_2:49045461-49045480 None:intergenic 35.0%
!! TTTCTGATTGAAGGCATTAG+AGG + chr8_2:49045464-49045483 Msa1252210:intron 35.0%
AAATCGCTATATAATGGCTC+AGG + chr8_2:49045817-49045836 Msa1252210:intron 35.0%
!!! GGTGTTTGGTTTTGATTTGA+TGG + chr8_2:49045992-49046011 Msa1252210:intron 35.0%
!!! TGGTTTTGATTTGATGGTGT+AGG + chr8_2:49045998-49046017 Msa1252210:intron 35.0%
!! TTTGATTTGATGGTGTAGGA+AGG + chr8_2:49046002-49046021 Msa1252210:intron 35.0%
!! TTGATTTGATGGTGTAGGAA+GGG + chr8_2:49046003-49046022 Msa1252210:intron 35.0%
TGGATTAACGCATAACATGT+TGG + chr8_2:49046027-49046046 Msa1252210:CDS 35.0%
!! TGGAGTTGATACATTCACAT+TGG + chr8_2:49046047-49046066 Msa1252210:CDS 35.0%
GTCTGCAAAATTCGTTGTAA+AGG + chr8_2:49046082-49046101 Msa1252210:CDS 35.0%
ACATTATCCATATCAACGGT+AGG - chr8_2:49046112-49046131 None:intergenic 35.0%
! GCCATATTGAGGTTTGAAAT+TGG + chr8_2:49046137-49046156 Msa1252210:intron 35.0%
GATTATAGATTGTGCACAAC+AGG + chr8_2:49046232-49046251 Msa1252210:intron 35.0%
ATATACCAACCCTTCACAAA+TGG + chr8_2:49046399-49046418 Msa1252210:intron 35.0%
ATTATCCATTTGTGAAGGGT+TGG - chr8_2:49046407-49046426 None:intergenic 35.0%
GGTCAATTATCCATTTGTGA+AGG - chr8_2:49046412-49046431 None:intergenic 35.0%
! CTTTGGTTGTTTGAGACTAT+AGG - chr8_2:49046512-49046531 None:intergenic 35.0%
AGGCATGTTTATATGAAGGA+TGG - chr8_2:49046552-49046571 None:intergenic 35.0%
CCGTAGTATATGACATAAGT+AGG + chr8_2:49046796-49046815 Msa1252210:intron 35.0%
AGGTTCTTACGATGTGTATT+CGG + chr8_2:49046827-49046846 Msa1252210:intron 35.0%
GGACAGAGTATATTCTCTTT+AGG + chr8_2:49046857-49046876 Msa1252210:intron 35.0%
GGACAAAGTATATTCTCTGT+AGG + chr8_2:49046888-49046907 Msa1252210:intron 35.0%
TATGATGTAAGTAGGAGGTT+AGG - chr8_2:49047068-49047087 None:intergenic 35.0%
GTAGTTATGATGTAAGTAGG+AGG - chr8_2:49047073-49047092 None:intergenic 35.0%
GAATGGTCAAAGTGAAAGAT+TGG - chr8_2:49047220-49047239 None:intergenic 35.0%
AATGACTTCATATGCTGTCA+AGG - chr8_2:49047303-49047322 None:intergenic 35.0%
AAGTATGCAAATTGTGGTCT+TGG + chr8_2:49047383-49047402 Msa1252210:intron 35.0%
TATCAAAATCCAAAGGGAAG+AGG + chr8_2:49047433-49047452 Msa1252210:intron 35.0%
AACAGGAAGTCTCTCAAAAT+GGG + chr8_2:49047474-49047493 Msa1252210:intron 35.0%
TAAAGTCAAGCAAAGACATC+TGG + chr8_2:49047565-49047584 Msa1252210:intron 35.0%
TGTCTGTCAGTTCATTAGTT+AGG + chr8_2:49047589-49047608 Msa1252210:intron 35.0%
! GTAAATAGTGGAAATCCGAT+TGG + chr8_2:49047611-49047630 Msa1252210:intron 35.0%
! AAATAGTGGAAATCCGATTG+GGG + chr8_2:49047613-49047632 Msa1252210:intron 35.0%
AAAGGAAAGATCCATTGTGA+AGG + chr8_2:49047671-49047690 Msa1252210:intron 35.0%
!!! AAGGGTTTTTTCCTTCACAA+TGG - chr8_2:49047685-49047704 None:intergenic 35.0%
ATTGTGAAGGAAAAAACCCT+TGG + chr8_2:49047684-49047703 Msa1252210:intron 35.0%
TTGTGAAGGAAAAAACCCTT+GGG + chr8_2:49047685-49047704 Msa1252210:intron 35.0%
CAACAATCAACTTTCATGCA+CGG - chr8_2:49047884-49047903 None:intergenic 35.0%
AAAATAATTCATCGAGCTGG+CGG + chr8_2:49047971-49047990 Msa1252210:CDS 35.0%
!! GGAGCATCTTGTATAAGTTT+TGG - chr8_2:49048088-49048107 None:intergenic 35.0%
AAGCTGAAGCAGTTGAATTA+AGG + chr8_2:49048122-49048141 Msa1252210:CDS 35.0%
GCAGTTGAATTAAGGATGAA+AGG + chr8_2:49048130-49048149 Msa1252210:CDS 35.0%
GCAATTAATAGCTGTCATTC+TGG + chr8_2:49048355-49048374 Msa1252210:intron 35.0%
!! GAAGTCAAAAGCATCTCATA+TGG - chr8_2:49048440-49048459 None:intergenic 35.0%
!!! GAGATGCTTTTGACTTCTTA+AGG + chr8_2:49048443-49048462 Msa1252210:intron 35.0%
!!! GATGCTTTTGACTTCTTAAG+GGG + chr8_2:49048445-49048464 Msa1252210:intron 35.0%
!! GAAGTCAAAAGCATCTCATA+TGG - chr8_2:49048440-49048459 None:intergenic 35.0%
!!! GAGATGCTTTTGACTTCTTA+AGG + chr8_2:49048443-49048462 Msa1252210:intron 35.0%
!!! GATGCTTTTGACTTCTTAAG+GGG + chr8_2:49048445-49048464 Msa1252210:intron 35.0%
TTTGAGTGCAGAATCTTAGT+TGG + chr8_2:49048882-49048901 Msa1252210:intron 35.0%
GTTATCTAGTACCTTAAGCT+TGG - chr8_2:49049218-49049237 None:intergenic 35.0%
GTGGAAACCAGAAGAATTTA+TGG - chr8_2:49049655-49049674 None:intergenic 35.0%
AAAGCCTGACAACAAAAAGT+AGG - chr8_2:49049766-49049785 None:intergenic 35.0%
! TTTGATCATTTTGCTTTGGC+AGG + chr8_2:49049989-49050008 Msa1252210:intron 35.0%
!! ATGAACAAGTACTGATTTGG+AGG + chr8_2:49050045-49050064 Msa1252210:CDS 35.0%
!! TGAACAAGTACTGATTTGGA+GGG + chr8_2:49050046-49050065 Msa1252210:CDS 35.0%
! TATTGAAAGTCTTGTCCGAA+TGG + chr8_2:49050203-49050222 Msa1252210:intron 35.0%
TCTCGTATCTAGGTAAGAAA+TGG + chr8_2:49050333-49050352 Msa1252210:intron 35.0%
AGAAATGCATTTGTGCATTG+AGG + chr8_2:49050489-49050508 Msa1252210:intron 35.0%
! GAGCTAGTTGAAAGTATAGA+TGG + chr8_2:49050529-49050548 Msa1252210:intron 35.0%
GGCTGAATTAGATTATGAAG+AGG + chr8_2:49050570-49050589 Msa1252210:intron 35.0%
GAATTAGATTATGAAGAGGC+TGG + chr8_2:49050574-49050593 Msa1252210:intron 35.0%
!! CCTTTATAATGTGATGATGG+GGG + chr8_2:49050626-49050645 Msa1252210:intron 35.0%
!! CTTTATAATGTGATGATGGG+GGG + chr8_2:49050627-49050646 Msa1252210:intron 35.0%
GAATAAAAGTTTCCCAGACA+GGG + chr8_2:49050657-49050676 Msa1252210:intron 35.0%
CTCGAAATTTCTTCGACATA+GGG + chr8_2:49050701-49050720 Msa1252210:intron 35.0%
TGATCATCTATGACATTGGA+GGG - chr8_2:49050751-49050770 None:intergenic 35.0%
ATGATCATCTATGACATTGG+AGG - chr8_2:49050752-49050771 None:intergenic 35.0%
GAGAAGGTAGAAGAATTTGA+GGG + chr8_2:49051069-49051088 Msa1252210:CDS 35.0%
TGAAGAAGTAAATGCTGGAT+AGG - chr8_2:49051118-49051137 None:intergenic 35.0%
TGACTTGAAGAAGTAAATGC+TGG - chr8_2:49051123-49051142 None:intergenic 35.0%
!! TCAAGTCAAACTGCTTTTGA+AGG + chr8_2:49051135-49051154 Msa1252210:CDS 35.0%
CAAGACAACTATTCAAGTGA+TGG + chr8_2:49051186-49051205 Msa1252210:CDS 35.0%
CATAATCATCAGCATCATCT+AGG - chr8_2:49051212-49051231 None:intergenic 35.0%
GATTACTACAATGACGAAGA+CGG + chr8_2:49051261-49051280 Msa1252210:CDS 35.0%
CGGTGAGTTTAATGATATAG+TGG + chr8_2:49051281-49051300 Msa1252210:CDS 35.0%
!! GGTGATGGGTTTGTAGTATT+TGG - chr8_2:49044928-49044947 None:intergenic 40.0%
GTAACTGAACTGAAACTCGA+AGG - chr8_2:49045033-49045052 None:intergenic 40.0%
GGTTCAAACGGTAAAAAAGC+CGG - chr8_2:49045095-49045114 None:intergenic 40.0%
TGATTCGTTTAATCCTCCTC+CGG + chr8_2:49045184-49045203 Msa1252210:CDS 40.0%
TTAACACCTTTCATCCCTTC+CGG - chr8_2:49045206-49045225 None:intergenic 40.0%
TTGGGAAGTTTCCTGAAGAA+GGG + chr8_2:49045255-49045274 Msa1252210:CDS 40.0%
! TCTCGGTGAGTTGGAATTTA+AGG + chr8_2:49045370-49045389 Msa1252210:intron 40.0%
! CTCGGTGAGTTGGAATTTAA+GGG + chr8_2:49045371-49045390 Msa1252210:intron 40.0%
!! TGATTGAAGGCATTAGAGGT+AGG + chr8_2:49045468-49045487 Msa1252210:intron 40.0%
TCAAATTAGTCCTAGCGTCA+AGG - chr8_2:49045535-49045554 None:intergenic 40.0%
TGTTAGACACAGACACATGT+TGG + chr8_2:49045591-49045610 Msa1252210:intron 40.0%
CAATTGAGACTTCTGATCGA+AGG - chr8_2:49045629-49045648 None:intergenic 40.0%
TGTGTCAATGTCGTGTTTCA+TGG + chr8_2:49045716-49045735 Msa1252210:intron 40.0%
GTGTTTCATGGATGTTAGTG+TGG + chr8_2:49045728-49045747 Msa1252210:intron 40.0%
! CTATATAATGGCTCAGGTTG+TGG + chr8_2:49045823-49045842 Msa1252210:intron 40.0%
CGAGATCTTTACTAGTTCCA+AGG - chr8_2:49045869-49045888 None:intergenic 40.0%
TTGTGAATTGTGGAAGGTGA+AGG + chr8_2:49045953-49045972 Msa1252210:intron 40.0%
TGTGAATTGTGGAAGGTGAA+GGG + chr8_2:49045954-49045973 Msa1252210:intron 40.0%
TGGACTGTGTTAATGGTGTT+TGG + chr8_2:49045978-49045997 Msa1252210:intron 40.0%
TAATGTTTGCCGCCATATTG+AGG + chr8_2:49046126-49046145 Msa1252210:CDS 40.0%
TTCTGTACAGGATCATCAGA+AGG - chr8_2:49046327-49046346 None:intergenic 40.0%
CCTGATGCATTTGCATGAAT+AGG - chr8_2:49046353-49046372 None:intergenic 40.0%
CCTATTCATGCAAATGCATC+AGG + chr8_2:49046350-49046369 Msa1252210:intron 40.0%
! CAACCATTATTTGATGGCAC+CGG + chr8_2:49046622-49046641 Msa1252210:intron 40.0%
!! TTTCCGGTGCCATCAAATAA+TGG - chr8_2:49046628-49046647 None:intergenic 40.0%
AGTTGTGTATTTCGTCATGC+AGG + chr8_2:49046718-49046737 Msa1252210:intron 40.0%
TGTAGGAGTTCATCAACTCT+GGG + chr8_2:49046905-49046924 Msa1252210:intron 40.0%
CTGGACTATACCTTCCAAAT+TGG - chr8_2:49046991-49047010 None:intergenic 40.0%
! TTTGGAAGGTATAGTCCAGA+AGG + chr8_2:49046992-49047011 Msa1252210:intron 40.0%
GGTTAGGAAGTAGTTATGGT+GGG - chr8_2:49047052-49047071 None:intergenic 40.0%
AGGTTAGGAAGTAGTTATGG+TGG - chr8_2:49047053-49047072 None:intergenic 40.0%
AGGAGGTTAGGAAGTAGTTA+TGG - chr8_2:49047056-49047075 None:intergenic 40.0%
! GGAAGTATAACTCTGCTATG+AGG - chr8_2:49047116-49047135 None:intergenic 40.0%
! GGACTCTGAATTCGGATTTT+AGG - chr8_2:49047245-49047264 None:intergenic 40.0%
GCAATGTTACAAATCCGACT+TGG - chr8_2:49047266-49047285 None:intergenic 40.0%
TATTTGTGCTCGGGACAAAA+TGG - chr8_2:49047348-49047367 None:intergenic 40.0%
AAATCCAAAGGGAAGAGGAA+TGG + chr8_2:49047438-49047457 Msa1252210:intron 40.0%
CAACAGGAAGTCTCTCAAAA+TGG + chr8_2:49047473-49047492 Msa1252210:intron 40.0%
AATCCCCAAATTCCACTTTG+AGG + chr8_2:49047497-49047516 Msa1252210:intron 40.0%
ATCCCCAAATTCCACTTTGA+GGG + chr8_2:49047498-49047517 Msa1252210:intron 40.0%
TTGCCCTCAAAGTGGAATTT+GGG - chr8_2:49047504-49047523 None:intergenic 40.0%
TGTGAAGGAAAAAACCCTTG+GGG + chr8_2:49047686-49047705 Msa1252210:intron 40.0%
GGGAAAATAATTCATCGAGC+TGG + chr8_2:49047968-49047987 Msa1252210:CDS 40.0%
! GGTGTAGTTTATCTTTTCCG+TGG + chr8_2:49047992-49048011 Msa1252210:CDS 40.0%
GGTAGTTGTAATTTCTGCCA+CGG - chr8_2:49048012-49048031 None:intergenic 40.0%
CTTATACAAGATGCTCCAGA+AGG + chr8_2:49048091-49048110 Msa1252210:CDS 40.0%
TCAGCTTTCGTTAATCCTTC+TGG - chr8_2:49048109-49048128 None:intergenic 40.0%
TCTTAAGGGGATTGTCAAGA+AGG + chr8_2:49048458-49048477 Msa1252210:intron 40.0%
TGTCAAGAAGGAACATCTCT+TGG + chr8_2:49048470-49048489 Msa1252210:intron 40.0%
TCTTAAGGGGATTGTCAAGA+AGG + chr8_2:49048458-49048477 Msa1252210:intron 40.0%
TGTCAAGAAGGAACATCTCT+TGG + chr8_2:49048470-49048489 Msa1252210:intron 40.0%
! GATGTCAGAGATGCTTTTGA+AGG + chr8_2:49049130-49049149 Msa1252210:intron 40.0%
!! TGCTTTTGAAGGAAGCCATT+TGG + chr8_2:49049141-49049160 Msa1252210:intron 40.0%
TGCAGTCAATCTTCACCAAA+TGG - chr8_2:49049159-49049178 None:intergenic 40.0%
TTTGGTGAAGATTGACTGCA+AGG + chr8_2:49049159-49049178 Msa1252210:intron 40.0%
TTGGTGAAGATTGACTGCAA+GGG + chr8_2:49049160-49049179 Msa1252210:intron 40.0%
GAAATTAGGTGCCAAGCTTA+AGG + chr8_2:49049204-49049223 Msa1252210:intron 40.0%
GGAACCTACATTATGCTCAA+AGG + chr8_2:49049356-49049375 Msa1252210:intron 40.0%
GCATCCTTTGAGCATAATGT+AGG - chr8_2:49049363-49049382 None:intergenic 40.0%
TTGGATAGAGAACAAACGCT+TGG - chr8_2:49049436-49049455 None:intergenic 40.0%
AGCTAGCAAAGTTCATGTGA+AGG + chr8_2:49049512-49049531 Msa1252210:intron 40.0%
GCTAGCAAAGTTCATGTGAA+GGG + chr8_2:49049513-49049532 Msa1252210:intron 40.0%
CAAAGTTCATGTGAAGGGTA+TGG + chr8_2:49049518-49049537 Msa1252210:intron 40.0%
! ATTTCAAGGTACCCTTACCA+AGG + chr8_2:49049616-49049635 Msa1252210:intron 40.0%
TGTGTTACAGTGTTGTACAC+TGG + chr8_2:49049717-49049736 Msa1252210:intron 40.0%
!!! TCAGCCTACTTTTTGTTGTC+AGG + chr8_2:49049759-49049778 Msa1252210:intron 40.0%
!! TCTATATTACAGCTCTAGGG+AGG + chr8_2:49049786-49049805 Msa1252210:intron 40.0%
! CATTTTGCTTTGGCAGGATT+TGG + chr8_2:49049995-49050014 Msa1252210:intron 40.0%
TCGAAAGACAATAGCACACA+AGG - chr8_2:49050023-49050042 None:intergenic 40.0%
!! GAACAAGTACTGATTTGGAG+GGG + chr8_2:49050047-49050066 Msa1252210:CDS 40.0%
TGCTGAAGCTACCATTACAA+GGG + chr8_2:49050115-49050134 Msa1252210:CDS 40.0%
! GCATTTGTGCATTGAGGTTT+TGG + chr8_2:49050495-49050514 Msa1252210:intron 40.0%
CCCCCATCATCACATTATAA+AGG - chr8_2:49050629-49050648 None:intergenic 40.0%
GGAATAAAAGTTTCCCAGAC+AGG + chr8_2:49050656-49050675 Msa1252210:intron 40.0%
CCTATGTCGAAGAAATTTCG+AGG - chr8_2:49050703-49050722 None:intergenic 40.0%
CCTCGAAATTTCTTCGACAT+AGG + chr8_2:49050700-49050719 Msa1252210:intron 40.0%
ACATTGTTAATCAGGTGAGG+TGG + chr8_2:49050912-49050931 Msa1252210:intron 40.0%
ATCTAAGCACATCAGCGAAA+TGG + chr8_2:49050945-49050964 Msa1252210:CDS 40.0%
GCCCAAAAATGTTATCTCTG+TGG + chr8_2:49050977-49050996 Msa1252210:CDS 40.0%
GGAGAAGGTAGAAGAATTTG+AGG + chr8_2:49051068-49051087 Msa1252210:CDS 40.0%
TGTCTTGTGTACCATCTTGA+AGG - chr8_2:49051173-49051192 None:intergenic 40.0%
CACCTTGAAACACCTATCCA+TGG + chr8_2:49044695-49044714 Msa1252210:exon 45.0%
CACCATGGATAGGTGTTTCA+AGG - chr8_2:49044700-49044719 None:intergenic 45.0%
ATGCAACTAGCACCATGGAT+AGG - chr8_2:49044710-49044729 None:intergenic 45.0%
GGATAATGCAACTAGCACCA+TGG - chr8_2:49044715-49044734 None:intergenic 45.0%
TATTTGGGAATGGGGATAGG+CGG - chr8_2:49044834-49044853 None:intergenic 45.0%
! TGTAGTATTTGGAGTTGCGG+TGG - chr8_2:49044917-49044936 None:intergenic 45.0%
ACCAATTGCTATCCGTGAAC+CGG + chr8_2:49045073-49045092 Msa1252210:CDS 45.0%
! ACGGTAAAAAAGCCGGTTCA+CGG - chr8_2:49045088-49045107 None:intergenic 45.0%
TCTTCAGGAAACTTCCCAAC+CGG - chr8_2:49045254-49045273 None:intergenic 45.0%
GTTGGGAAGTTTCCTGAAGA+AGG + chr8_2:49045254-49045273 Msa1252210:CDS 45.0%
TGGGAAGTTTCCTGAAGAAG+GGG + chr8_2:49045256-49045275 Msa1252210:CDS 45.0%
GTGAGTAGAGAGGAGATACT+TGG + chr8_2:49045278-49045297 Msa1252210:CDS 45.0%
CCAACTCACCGAGATTAACT+TGG - chr8_2:49045364-49045383 None:intergenic 45.0%
CCAAGTTAATCTCGGTGAGT+TGG + chr8_2:49045361-49045380 Msa1252210:intron 45.0%
CAGAAATGTCGGTGCATCAT+AGG - chr8_2:49045450-49045469 None:intergenic 45.0%
! GCACCGACATTTCTGATTGA+AGG + chr8_2:49045455-49045474 Msa1252210:intron 45.0%
! ATGGATGTTAGTGTGGACTG+TGG + chr8_2:49045735-49045754 Msa1252210:intron 45.0%
! GTGGACTGTGGTTGCTTTAT+TGG + chr8_2:49045747-49045766 Msa1252210:intron 45.0%
AATTGTGGAAGGTGAAGGGT+TGG + chr8_2:49045958-49045977 Msa1252210:intron 45.0%
GAAGGGTTGGACTGTGTTAA+TGG + chr8_2:49045971-49045990 Msa1252210:intron 45.0%
!! TTTGATGGTGTAGGAAGGGA+TGG + chr8_2:49046007-49046026 Msa1252210:intron 45.0%
AGGTGTTCCTACCGTTGATA+TGG + chr8_2:49046102-49046121 Msa1252210:CDS 45.0%
CATCAGGTTCCATCTTCGTA+AGG + chr8_2:49046366-49046385 Msa1252210:intron 45.0%
GTTACCAAGCCTTACGAAGA+TGG - chr8_2:49046378-49046397 None:intergenic 45.0%
AATGTAACCCCCTCTCATTC+TGG + chr8_2:49046447-49046466 Msa1252210:intron 45.0%
AGCAGAGATCCAGAATGAGA+GGG - chr8_2:49046459-49046478 None:intergenic 45.0%
AAGCAGAGATCCAGAATGAG+AGG - chr8_2:49046460-49046479 None:intergenic 45.0%
! TTGGTGTCTAGTTCGAGCTT+TGG - chr8_2:49046529-49046548 None:intergenic 45.0%
CGATGTGTATTCGGTAGTTC+TGG + chr8_2:49046836-49046855 Msa1252210:intron 45.0%
CTGTAGGAGTTCATCAACTC+TGG + chr8_2:49046904-49046923 Msa1252210:intron 45.0%
TCCAGAAGGATGTACAGCAT+AGG + chr8_2:49047006-49047025 Msa1252210:intron 45.0%
TCCTATGCTGTACATCCTTC+TGG - chr8_2:49047010-49047029 None:intergenic 45.0%
CTGCTATGAGGTAGTGACAT+TGG - chr8_2:49047104-49047123 None:intergenic 45.0%
AATATTTCAGACGGGCGTGT+AGG - chr8_2:49047137-49047156 None:intergenic 45.0%
TCCGAATTCAGAGTCCAAGT+CGG + chr8_2:49047249-49047268 Msa1252210:intron 45.0%
!! TCCGACTTGGACTCTGAATT+CGG - chr8_2:49047253-49047272 None:intergenic 45.0%
AGGCAATGGGTATTTGTGCT+CGG - chr8_2:49047358-49047377 None:intergenic 45.0%
CAAAGGGAAGAGGAATGGTT+GGG + chr8_2:49047443-49047462 Msa1252210:intron 45.0%
ATGGTTGGGAGATGATCAAC+AGG + chr8_2:49047457-49047476 Msa1252210:intron 45.0%
TGCCCTCAAAGTGGAATTTG+GGG - chr8_2:49047503-49047522 None:intergenic 45.0%
CTTGCCCTCAAAGTGGAATT+TGG - chr8_2:49047505-49047524 None:intergenic 45.0%
! CAAATTCCACTTTGAGGGCA+AGG + chr8_2:49047503-49047522 Msa1252210:intron 45.0%
GTGAAGGAAAAAACCCTTGG+GGG + chr8_2:49047687-49047706 Msa1252210:intron 45.0%
TGGGGAATAAAATCCCCCAA+GGG - chr8_2:49047703-49047722 None:intergenic 45.0%
ATGGGGAATAAAATCCCCCA+AGG - chr8_2:49047704-49047723 None:intergenic 45.0%
TGTCATGACAGGAGAAAGCA+GGG + chr8_2:49047945-49047964 Msa1252210:intron 45.0%
TTTGGATAAACAGGAGCAGC+TGG - chr8_2:49048070-49048089 None:intergenic 45.0%
CTTGCGACTGCAATTACTCT+AGG - chr8_2:49048261-49048280 None:intergenic 45.0%
CTAGAGTAATTGCAGTCGCA+AGG + chr8_2:49048259-49048278 Msa1252210:intron 45.0%
CTTGCGACTGCAATTACTCT+AGG - chr8_2:49048261-49048280 None:intergenic 45.0%
CTAGAGTAATTGCAGTCGCA+AGG + chr8_2:49048259-49048278 Msa1252210:intron 45.0%
TCTGCACTCAAATCTTCTGC+AGG - chr8_2:49048874-49048893 None:intergenic 45.0%
!! TGTGGTGTTGCAGCCAAAAA+TGG + chr8_2:49049085-49049104 Msa1252210:intron 45.0%
GAAGATTGACTGCAAGGGAT+TGG + chr8_2:49049165-49049184 Msa1252210:intron 45.0%
CACTGGCACGATAATTAGTC+TGG + chr8_2:49049734-49049753 Msa1252210:intron 45.0%
!! ATATTACAGCTCTAGGGAGG+AGG + chr8_2:49049789-49049808 Msa1252210:intron 45.0%
!! TATTACAGCTCTAGGGAGGA+GGG + chr8_2:49049790-49049809 Msa1252210:intron 45.0%
! TGATTTGGAGGGGCAAAGAT+TGG + chr8_2:49050057-49050076 Msa1252210:CDS 45.0%
GAGGAAAAACTGGAGCTTGA+GGG - chr8_2:49050094-49050113 None:intergenic 45.0%
CTTGTAATGGTAGCTTCAGC+AGG - chr8_2:49050116-49050135 None:intergenic 45.0%
CTGCTGAAGCTACCATTACA+AGG + chr8_2:49050114-49050133 Msa1252210:CDS 45.0%
TATTGGTCCTGATGCTCTCT+TGG + chr8_2:49051047-49051066 Msa1252210:CDS 45.0%
! AAATCAACTGGTAGCGATCC+AGG - chr8_2:49051321-49051340 None:intergenic 45.0%
!! AATAAATTTAATGTTTATAT+TGG - chr8_2:49049455-49049474 None:intergenic 5.0%
GAGGAAGATGAGGGGTTGTT+GGG - chr8_2:49044783-49044802 None:intergenic 50.0%
ATGAGGAGGAGGAAGATGAG+GGG - chr8_2:49044791-49044810 None:intergenic 50.0%
GATGAGGAGGAGGAAGATGA+GGG - chr8_2:49044792-49044811 None:intergenic 50.0%
GGGTATTTGGGAATGGGGAT+AGG - chr8_2:49044837-49044856 None:intergenic 50.0%
GGCATTGTGGGAGGTTCAAA+CGG - chr8_2:49045107-49045126 None:intergenic 50.0%
TCGTTTAATCCTCCTCCGGA+AGG + chr8_2:49045188-49045207 Msa1252210:CDS 50.0%
CGTTTAATCCTCCTCCGGAA+GGG + chr8_2:49045189-49045208 Msa1252210:CDS 50.0%
GGAAACTTCCCAACCGGAAA+CGG - chr8_2:49045248-49045267 None:intergenic 50.0%
TCTCTACTCACCCCTTCTTC+AGG - chr8_2:49045269-49045288 None:intergenic 50.0%
TGAAGAAGGGGTGAGTAGAG+AGG + chr8_2:49045268-49045287 Msa1252210:CDS 50.0%
! AGATACTTGGTGAGCCGCTT+AGG + chr8_2:49045291-49045310 Msa1252210:CDS 50.0%
TGGCGATTATCGGCCATCAT+AGG - chr8_2:49045344-49045363 None:intergenic 50.0%
ACCGACACAGACACAAACAC+CGG + chr8_2:49045495-49045514 Msa1252210:intron 50.0%
TCCGGTGTTTGTGTCTGTGT+CGG - chr8_2:49045499-49045518 None:intergenic 50.0%
TAGTCCTAGCGTCAAGGTGT+CGG - chr8_2:49045529-49045548 None:intergenic 50.0%
GGTTCCATCTTCGTAAGGCT+TGG + chr8_2:49046371-49046390 Msa1252210:intron 50.0%
CAGAGATCCAGAATGAGAGG+GGG - chr8_2:49046457-49046476 None:intergenic 50.0%
GCAGAGATCCAGAATGAGAG+GGG - chr8_2:49046458-49046477 None:intergenic 50.0%
GACATAAGTAGGGGGCTAAG+AGG + chr8_2:49046807-49046826 Msa1252210:intron 50.0%
GGCAATGGGTATTTGTGCTC+GGG - chr8_2:49047357-49047376 None:intergenic 50.0%
CCAACCATTCCTCTTCCCTT+TGG - chr8_2:49047445-49047464 None:intergenic 50.0%
CCAAAGGGAAGAGGAATGGT+TGG + chr8_2:49047442-49047461 Msa1252210:intron 50.0%
! ATTCCACTTTGAGGGCAAGG+TGG + chr8_2:49047506-49047525 Msa1252210:intron 50.0%
TAGTGGAAATCCGATTGGGG+AGG + chr8_2:49047616-49047635 Msa1252210:intron 50.0%
AGTGGAAATCCGATTGGGGA+GGG + chr8_2:49047617-49047636 Msa1252210:intron 50.0%
CTGTCATGACAGGAGAAAGC+AGG + chr8_2:49047944-49047963 Msa1252210:intron 50.0%
GTCATGACAGGAGAAAGCAG+GGG + chr8_2:49047946-49047965 Msa1252210:intron 50.0%
TCATGACAGGAGAAAGCAGG+GGG + chr8_2:49047947-49047966 Msa1252210:intron 50.0%
CTGGATACTGTGGACGAGTA+CGG - chr8_2:49048033-49048052 None:intergenic 50.0%
! CAGAGCATCACTGGATACTG+TGG - chr8_2:49048043-49048062 None:intergenic 50.0%
CACAGTATCCAGTGATGCTC+TGG + chr8_2:49048041-49048060 Msa1252210:CDS 50.0%
GTAATTGCAGTCGCAAGGTG+AGG + chr8_2:49048264-49048283 Msa1252210:intron 50.0%
GTAATTGCAGTCGCAAGGTG+AGG + chr8_2:49048264-49048283 Msa1252210:intron 50.0%
GGAGGAAAAACTGGAGCTTG+AGG - chr8_2:49050095-49050114 None:intergenic 50.0%
GCTTCAGCAGGAGGAAAAAC+TGG - chr8_2:49050104-49050123 None:intergenic 50.0%
GTAATGGTAGCTTCAGCAGG+AGG - chr8_2:49050113-49050132 None:intergenic 50.0%
!! TGTGATGATGGGGGGAAATG+AGG + chr8_2:49050635-49050654 Msa1252210:intron 50.0%
TTCACTGCAACTCCCTGTCT+GGG - chr8_2:49050672-49050691 None:intergenic 50.0%
ATTCACTGCAACTCCCTGTC+TGG - chr8_2:49050673-49050692 None:intergenic 50.0%
TTCGACATAGGGAAGCTCTC+TGG + chr8_2:49050712-49050731 Msa1252210:intron 50.0%
TCGACATAGGGAAGCTCTCT+GGG + chr8_2:49050713-49050732 Msa1252210:intron 50.0%
TCCTGATGCTCTCTTGGAGA+AGG + chr8_2:49051053-49051072 Msa1252210:CDS 50.0%
!! ACCTTCTCCAAGAGAGCATC+AGG - chr8_2:49051057-49051076 None:intergenic 50.0%
GTGGATACATCAGCTGAACC+TGG + chr8_2:49051300-49051319 Msa1252210:CDS 50.0%
TGGGTGGTAAGGAGGAGAAG+AGG - chr8_2:49044764-49044783 None:intergenic 55.0%
TGAGGGGTTGTTGGGTGGTA+AGG - chr8_2:49044775-49044794 None:intergenic 55.0%
GAAGATGAGGGGTTGTTGGG+TGG - chr8_2:49044780-49044799 None:intergenic 55.0%
GGAGGAAGATGAGGGGTTGT+TGG - chr8_2:49044784-49044803 None:intergenic 55.0%
GGATGAGGAGGAGGAAGATG+AGG - chr8_2:49044793-49044812 None:intergenic 55.0%
!! GTGGGGGGTATTTGGGAATG+GGG - chr8_2:49044842-49044861 None:intergenic 55.0%
!! GGTGGGGGGTATTTGGGAAT+GGG - chr8_2:49044843-49044862 None:intergenic 55.0%
!! AGGTGGGGGGTATTTGGGAA+TGG - chr8_2:49044844-49044863 None:intergenic 55.0%
!! TTGCGAGGTGGGGGGTATTT+GGG - chr8_2:49044849-49044868 None:intergenic 55.0%
!! TTTGCGAGGTGGGGGGTATT+TGG - chr8_2:49044850-49044869 None:intergenic 55.0%
!! TTTGGGTTTGGTGGTGGTGG+GGG - chr8_2:49044879-49044898 None:intergenic 55.0%
!! GTTTGGGTTTGGTGGTGGTG+GGG - chr8_2:49044880-49044899 None:intergenic 55.0%
!! GGTTTGGGTTTGGTGGTGGT+GGG - chr8_2:49044881-49044900 None:intergenic 55.0%
GGAGTTGCGGTGGTGTTTGA+GGG - chr8_2:49044907-49044926 None:intergenic 55.0%
TGGAGTTGCGGTGGTGTTTG+AGG - chr8_2:49044908-49044927 None:intergenic 55.0%
!! ATGGTAGTGGGGTGGGTGAT+GGG - chr8_2:49044942-49044961 None:intergenic 55.0%
TCGGAGGAAGGGATGGTAGT+GGG - chr8_2:49044954-49044973 None:intergenic 55.0%
!! GATGATGACGGAGCGGTTGT+CGG - chr8_2:49044973-49044992 None:intergenic 55.0%
GACAACCGCTCCGTCATCAT+CGG + chr8_2:49044972-49044991 Msa1252210:CDS 55.0%
!! ATTCGCCGATGATGACGGAG+CGG - chr8_2:49044980-49044999 None:intergenic 55.0%
TCCGTCATCATCGGCGAATC+CGG + chr8_2:49044981-49045000 Msa1252210:CDS 55.0%
GAAACTCGAAGGGAGCTCCA+GGG - chr8_2:49045022-49045041 None:intergenic 55.0%
TGAAACTCGAAGGGAGCTCC+AGG - chr8_2:49045023-49045042 None:intergenic 55.0%
! GCCGGTTCACGGATAGCAAT+TGG - chr8_2:49045077-49045096 None:intergenic 55.0%
TTGAACCTCCCACAATGCCG+AGG + chr8_2:49045108-49045127 Msa1252210:CDS 55.0%
AACGGAGCTTTCCCTGTCCA+CGG - chr8_2:49045134-49045153 None:intergenic 55.0%
ACACCTTTCATCCCTTCCGG+AGG - chr8_2:49045203-49045222 None:intergenic 55.0%
TTGGTGAGCCGCTTAGGAAG+TGG + chr8_2:49045297-49045316 Msa1252210:CDS 55.0%
TGGTGAGCCGCTTAGGAAGT+GGG + chr8_2:49045298-49045317 Msa1252210:CDS 55.0%
TGCACCTCCCACTTCCTAAG+CGG - chr8_2:49045308-49045327 None:intergenic 55.0%
!! CAAGGTGTCGGTGTCAAGTC+CGG - chr8_2:49045517-49045536 None:intergenic 55.0%
! CTTCTGATCGAAGGTGCGTC+TGG - chr8_2:49045620-49045639 None:intergenic 55.0%
CATGACAGGAGAAAGCAGGG+GGG + chr8_2:49047948-49047967 Msa1252210:intron 55.0%
!! TGCTGGATAGGAGTGCTCTG+TGG - chr8_2:49051106-49051125 None:intergenic 55.0%
TTATCCTCTCCCCTCCCAGC+TGG + chr8_2:49044729-49044748 Msa1252210:CDS 60.0%
AGAGGTTCCCCCTACCAGCT+GGG - chr8_2:49044746-49044765 None:intergenic 60.0%
AAGAGGTTCCCCCTACCAGC+TGG - chr8_2:49044747-49044766 None:intergenic 60.0%
GGGGTTGTTGGGTGGTAAGG+AGG - chr8_2:49044772-49044791 None:intergenic 60.0%
AATGGGGATAGGCGGACGTG+GGG - chr8_2:49044826-49044845 None:intergenic 60.0%
GAATGGGGATAGGCGGACGT+GGG - chr8_2:49044827-49044846 None:intergenic 60.0%
! GGTGTGATTTGCGAGGTGGG+GGG - chr8_2:49044857-49044876 None:intergenic 60.0%
! GGGTGTGATTTGCGAGGTGG+GGG - chr8_2:49044858-49044877 None:intergenic 60.0%
! GGGGTGTGATTTGCGAGGTG+GGG - chr8_2:49044859-49044878 None:intergenic 60.0%
! GGGGGTGTGATTTGCGAGGT+GGG - chr8_2:49044860-49044879 None:intergenic 60.0%
!! TTGGGTTTGGTGGTGGTGGG+GGG - chr8_2:49044878-49044897 None:intergenic 60.0%
!! GGGTTTGGGTTTGGTGGTGG+TGG - chr8_2:49044882-49044901 None:intergenic 60.0%
! TTGAGGGCGGGGTTTGGGTT+TGG - chr8_2:49044891-49044910 None:intergenic 60.0%
GGTGTTTGAGGGCGGGGTTT+GGG - chr8_2:49044896-49044915 None:intergenic 60.0%
TGGTGTTTGAGGGCGGGGTT+TGG - chr8_2:49044897-49044916 None:intergenic 60.0%
TTGCGGTGGTGTTTGAGGGC+GGG - chr8_2:49044903-49044922 None:intergenic 60.0%
GTTGCGGTGGTGTTTGAGGG+CGG - chr8_2:49044904-49044923 None:intergenic 60.0%
!! GATGGTAGTGGGGTGGGTGA+TGG - chr8_2:49044943-49044962 None:intergenic 60.0%
!! GGAAGGGATGGTAGTGGGGT+GGG - chr8_2:49044949-49044968 None:intergenic 60.0%
!! AGGAAGGGATGGTAGTGGGG+TGG - chr8_2:49044950-49044969 None:intergenic 60.0%
! CGGAGGAAGGGATGGTAGTG+GGG - chr8_2:49044953-49044972 None:intergenic 60.0%
GTCGGAGGAAGGGATGGTAG+TGG - chr8_2:49044955-49044974 None:intergenic 60.0%
GCCGGATTCGCCGATGATGA+CGG - chr8_2:49044985-49045004 None:intergenic 60.0%
AGGGAGAAGGTAGGAGACGC+CGG - chr8_2:49045003-49045022 None:intergenic 60.0%
CCTTTCATCCCTTCCGGAGG+AGG - chr8_2:49045200-49045219 None:intergenic 60.0%
CCTCCTCCGGAAGGGATGAA+AGG + chr8_2:49045197-49045216 Msa1252210:CDS 60.0%
TGAAATGCCGGGGCCGTTTC+CGG + chr8_2:49045232-49045251 Msa1252210:CDS 60.0%
TGAGCCGCTTAGGAAGTGGG+AGG + chr8_2:49045301-49045320 Msa1252210:CDS 60.0%
GACACCGACACCTTGACGCT+AGG + chr8_2:49045522-49045541 Msa1252210:intron 60.0%
GCTCCACCTTGCCCTCAAAG+TGG - chr8_2:49047512-49047531 None:intergenic 60.0%
!! CGGGTTGATCCCTCCCCAAT+CGG - chr8_2:49047629-49047648 None:intergenic 60.0%
! GCTGGCTTCCAGAGCATCAC+TGG - chr8_2:49048052-49048071 None:intergenic 60.0%
CTCTCCCCTCCCAGCTGGTA+GGG + chr8_2:49044734-49044753 Msa1252210:CDS 65.0%
TCTCCCCTCCCAGCTGGTAG+GGG + chr8_2:49044735-49044754 Msa1252210:CDS 65.0%
TTCCCCCTACCAGCTGGGAG+GGG - chr8_2:49044741-49044760 None:intergenic 65.0%
GTTCCCCCTACCAGCTGGGA+GGG - chr8_2:49044742-49044761 None:intergenic 65.0%
GGCGGATGAGGATGAGGAGG+AGG - chr8_2:49044802-49044821 None:intergenic 65.0%
!! GGTGGCGGATGAGGATGAGG+AGG - chr8_2:49044805-49044824 None:intergenic 65.0%
!! TGGGGTGGCGGATGAGGATG+AGG - chr8_2:49044808-49044827 None:intergenic 65.0%
GGAATGGGGATAGGCGGACG+TGG - chr8_2:49044828-49044847 None:intergenic 65.0%
! GGGGGGTGTGATTTGCGAGG+TGG - chr8_2:49044861-49044880 None:intergenic 65.0%
! GGTGGGGGGTGTGATTTGCG+AGG - chr8_2:49044864-49044883 None:intergenic 65.0%
!! GCGGGGTTTGGGTTTGGTGG+TGG - chr8_2:49044885-49044904 None:intergenic 65.0%
! AGGGCGGGGTTTGGGTTTGG+TGG - chr8_2:49044888-49044907 None:intergenic 65.0%
TGCGGTGGTGTTTGAGGGCG+GGG - chr8_2:49044902-49044921 None:intergenic 65.0%
GCGGTTGTCGGAGGAAGGGA+TGG - chr8_2:49044961-49044980 None:intergenic 65.0%
CGGAGCGGTTGTCGGAGGAA+GGG - chr8_2:49044965-49044984 None:intergenic 65.0%
ACGGAGCGGTTGTCGGAGGA+AGG - chr8_2:49044966-49044985 None:intergenic 65.0%
!! GATGACGGAGCGGTTGTCGG+AGG - chr8_2:49044970-49044989 None:intergenic 65.0%
GGCGTCTCCTACCTTCTCCC+TGG + chr8_2:49045002-49045021 Msa1252210:CDS 65.0%
GGGAGCTCCAGGGAGAAGGT+AGG - chr8_2:49045012-49045031 None:intergenic 65.0%
CGAAGGGAGCTCCAGGGAGA+AGG - chr8_2:49045016-49045035 None:intergenic 65.0%
GTCCACGGCCTCGGCATTGT+GGG - chr8_2:49045119-49045138 None:intergenic 65.0%
TGTCCACGGCCTCGGCATTG+TGG - chr8_2:49045120-49045139 None:intergenic 65.0%
ACAATGCCGAGGCCGTGGAC+AGG + chr8_2:49045119-49045138 Msa1252210:CDS 65.0%
CAATGCCGAGGCCGTGGACA+GGG + chr8_2:49045120-49045139 Msa1252210:CDS 65.0%
GCTTTCCCTGTCCACGGCCT+CGG - chr8_2:49045128-49045147 None:intergenic 65.0%
TTCCCAACCGGAAACGGCCC+CGG - chr8_2:49045242-49045261 None:intergenic 65.0%
CCTACCAGCTGGGAGGGGAG+AGG - chr8_2:49044736-49044755 None:intergenic 70.0%
CCTCTCCCCTCCCAGCTGGT+AGG + chr8_2:49044733-49044752 Msa1252210:CDS 70.0%
CTCCCCTCCCAGCTGGTAGG+GGG + chr8_2:49044736-49044755 Msa1252210:CDS 70.0%
GGTTCCCCCTACCAGCTGGG+AGG - chr8_2:49044743-49044762 None:intergenic 70.0%
GATAGGCGGACGTGGGGTGG+CGG - chr8_2:49044820-49044839 None:intergenic 70.0%
CACGGCCTCGGCATTGTGGG+AGG - chr8_2:49045116-49045135 None:intergenic 70.0%
CTCCCACAATGCCGAGGCCG+TGG + chr8_2:49045114-49045133 Msa1252210:CDS 70.0%
ATGCCGGGGCCGTTTCCGGT+TGG + chr8_2:49045236-49045255 Msa1252210:CDS 70.0%
TGCCGGGGCCGTTTCCGGTT+GGG + chr8_2:49045237-49045256 Msa1252210:CDS 70.0%
!! CGGACGTGGGGTGGCGGATG+AGG - chr8_2:49044814-49044833 None:intergenic 75.0%
GGGGATAGGCGGACGTGGGG+TGG - chr8_2:49044823-49044842 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 49044691 49051566 49044691 ID=Msa1252210;Name=Msa1252210
chr8_2 mRNA 49044691 49051566 49044691 ID=Msa1252210-mRNA-1;Parent=Msa1252210;Name=Msa1252210-mRNA-1;_AED=0.07;_eAED=0.07;_QI=23|0.6|0.83|0.83|1|1|6|189|552
chr8_2 exon 49044691 49045374 49044691 ID=Msa1252210-mRNA-1:exon:14789;Parent=Msa1252210-mRNA-1
chr8_2 exon 49046020 49046147 49046020 ID=Msa1252210-mRNA-1:exon:14790;Parent=Msa1252210-mRNA-1
chr8_2 exon 49047956 49048181 49047956 ID=Msa1252210-mRNA-1:exon:14791;Parent=Msa1252210-mRNA-1
chr8_2 exon 49049886 49049935 49049886 ID=Msa1252210-mRNA-1:exon:14792;Parent=Msa1252210-mRNA-1
chr8_2 exon 49050011 49050152 49050011 ID=Msa1252210-mRNA-1:exon:14793;Parent=Msa1252210-mRNA-1
chr8_2 exon 49050926 49051566 49050926 ID=Msa1252210-mRNA-1:exon:14794;Parent=Msa1252210-mRNA-1
chr8_2 five_prime_UTR 49044691 49044713 49044691 ID=Msa1252210-mRNA-1:five_prime_utr;Parent=Msa1252210-mRNA-1
chr8_2 CDS 49044714 49045374 49044714 ID=Msa1252210-mRNA-1:cds;Parent=Msa1252210-mRNA-1
chr8_2 CDS 49046020 49046147 49046020 ID=Msa1252210-mRNA-1:cds;Parent=Msa1252210-mRNA-1
chr8_2 CDS 49047956 49048181 49047956 ID=Msa1252210-mRNA-1:cds;Parent=Msa1252210-mRNA-1
chr8_2 CDS 49049886 49049935 49049886 ID=Msa1252210-mRNA-1:cds;Parent=Msa1252210-mRNA-1
chr8_2 CDS 49050011 49050152 49050011 ID=Msa1252210-mRNA-1:cds;Parent=Msa1252210-mRNA-1
chr8_2 CDS 49050926 49051377 49050926 ID=Msa1252210-mRNA-1:cds;Parent=Msa1252210-mRNA-1
chr8_2 three_prime_UTR 49051378 49051566 49051378 ID=Msa1252210-mRNA-1:three_prime_utr;Parent=Msa1252210-mRNA-1
Gene Sequence

>Msa1252210

ATGGTGCTAGTTGCATTATCCTCTCCCCTCCCAGCTGGTAGGGGGAACCTCTTCTCCTCCTTACCACCCAACAACCCCTCATCTTCCTCCTCCTCATCCTCATCCGCCACCCCACGTCCGCCTATCCCCATTCCCAAATACCCCCCACCTCGCAAATCACACCCCCCACCACCACCAAACCCAAACCCCGCCCTCAAACACCACCGCAACTCCAAATACTACAAACCCATCACCCACCCCACTACCATCCCTTCCTCCGACAACCGCTCCGTCATCATCGGCGAATCCGGCGTCTCCTACCTTCTCCCTGGAGCTCCCTTCGAGTTTCAGTTCAGTTACTCCGAAACTCCAAAAGTGAAACCAATTGCTATCCGTGAACCGGCTTTTTTACCGTTTGAACCTCCCACAATGCCGAGGCCGTGGACAGGGAAAGCTCCGTTGAAGAAGTCGAAGAAGAATATTCCGCTGTTTGATTCGTTTAATCCTCCTCCGGAAGGGATGAAAGGTGTTAAGAAAGTTGAAATGCCGGGGCCGTTTCCGGTTGGGAAGTTTCCTGAAGAAGGGGTGAGTAGAGAGGAGATACTTGGTGAGCCGCTTAGGAAGTGGGAGGTGCAAATGCTTGTTAAGCCTATGATGGCCGATAATCGCCAAGTTAATCTCGGAAGGGATGGATTAACGCATAACATGTTGGAGTTGATACATTCACATTGGAAGCGACGTCGCGTCTGCAAAATTCGTTGTAAAGGTGTTCCTACCGTTGATATGGATAATGTTTGCCGCCATATTGAGGAGAAAGCAGGGGGGAAAATAATTCATCGAGCTGGCGGTGTAGTTTATCTTTTCCGTGGCAGAAATTACAACTACCGTACTCGTCCACAGTATCCAGTGATGCTCTGGAAGCCAGCTGCTCCTGTTTATCCAAAACTTATACAAGATGCTCCAGAAGGATTAACGAAAGCTGAAGCAGTTGAATTAAGGATGAAAGGGAAAAGCTTGTTGCCAATATGTAAATTAGAACATAATAAAACAGGTCATGTGCAGTGTATAGTAGCACGCATCGTGTTTGATTTGGTTCCTTGTGTGCTATTGTCTTTCGATGATGAACAAGTACTGATTTGGAGGGGCAAAGATTGGAAATCAATGTACCCTCAAGCTCCAGTTTTTCCTCCTGCTGAAGCTACCATTACAAGGGATTTAGAAAATAAAGGTGAGGTGGATGATAATCAATCTAAGCACATCAGCGAAATGGTCAGCACAAGCCCAAAAATGTTATCTCTGTGGAAGAGTGCAATTGAGTCAAACAAAGCCTTATTGCTAGAAGAATTTAATATTGGTCCTGATGCTCTCTTGGAGAAGGTAGAAGAATTTGAGGGTATTTCACATGCCACAGAGCACTCCTATCCAGCATTTACTTCTTCAAGTCAAACTGCTTTTGAAGGTTCAAATTTATACCTTCAAGATGGTACACAAGACAACTATTCAAGTGATGGCCTAGATGATGCTGATGATTATGATAATAACAGTGACGACGAAGATGATTATGATTACTACAATGACGAAGACGGTGAGTTTAATGATATAGTGGATACATCAGCTGAACCTGGATCGCTACCAGTTGATTTGCTTGTTGATAAGCTCAAACTAAGACAAAAGGAGTAA
Protein sequence

>Msa1252210

MVLVALSSPLPAGRGNLFSSLPPNNPSSSSSSSSSATPRPPIPIPKYPPPRKSHPPPPPNPNPALKHHRNSKYYKPITHPTTIPSSDNRSVIIGESGVSYLLPGAPFEFQFSYSETPKVKPIAIREPAFLPFEPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPEGMKGVKKVEMPGPFPVGKFPEEGVSREEILGEPLRKWEVQMLVKPMMADNRQVNLGRDGLTHNMLELIHSHWKRRRVCKIRCKGVPTVDMDNVCRHIEEKAGGKIIHRAGGVVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQDAPEGLTKAEAVELRMKGKSLLPICKLEHNKTGHVQCIVARIVFDLVPCVLLSFDDEQVLIWRGKDWKSMYPQAPVFPPAEATITRDLENKGEVDDNQSKHISEMVSTSPKMLSLWKSAIESNKALLLEEFNIGPDALLEKVEEFEGISHATEHSYPAFTSSSQTAFEGSNLYLQDGTQDNYSSDGLDDADDYDNNSDDEDDYDYYNDEDGEFNDIVDTSAEPGSLPVDLLVDKLKLRQKE*