AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1367560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1367560 MtrunA17_Chr3g0145711 98.514 471 4 1 1 471 1 468 0.0 947
Msa1367560 MtrunA17_Chr7g0233361 34.448 299 169 10 79 364 87 371 1.00e-33 132
Msa1367560 MtrunA17_Chr8g0376561 30.537 298 182 8 79 363 52 337 2.02e-31 125
Msa1367560 MtrunA17_Chr7g0244421 27.946 297 197 8 79 363 83 374 8.15e-21 95.1
Msa1367560 MtrunA17_Chr8g0382871 25.373 335 219 11 78 394 82 403 2.10e-17 84.7
Msa1367560 MtrunA17_Chr3g0106581 25.524 286 182 8 40 312 51 318 7.08e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1367560 AT3G48730.1 79.958 474 86 4 1 471 5 472 0.0 777
Msa1367560 AT5G63570.1 79.560 455 88 2 17 471 25 474 0.0 755
Msa1367560 AT5G63570.2 82.725 411 71 0 61 471 1 411 0.0 719
Msa1367560 AT5G46180.1 28.882 322 204 8 79 387 59 368 4.27e-30 122
Msa1367560 AT1G80600.1 29.773 309 170 10 79 364 77 361 9.28e-26 109
Msa1367560 AT3G08860.2 26.667 315 206 11 79 377 83 388 3.81e-20 93.2
Msa1367560 AT3G08860.1 26.667 315 206 11 79 377 83 388 5.26e-20 92.8
Msa1367560 AT4G39660.1 25.519 337 216 11 78 394 77 398 1.46e-19 91.7
Msa1367560 AT4G39660.2 25.538 325 207 11 90 394 14 323 3.19e-19 90.1
Msa1367560 AT2G38400.2 25.444 338 214 10 78 394 79 399 1.91e-16 82.0
Msa1367560 AT2G38400.1 25.444 338 214 10 78 394 79 399 2.07e-16 82.0

Find 158 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAGTTTGCTAAGTTCTTC+TGG 0.125787 tig0018513:+229340 Msa1367560:CDS
TCTTGGGGTCCTGCAATTAT+TGG 0.214742 tig0018513:+228303 Msa1367560:CDS
ATTAGATCTATGTATTATTA+TGG 0.232859 tig0018513:+229559 Msa1367560:three_prime_UTR
TTGACGGAATCAATGATAAT+TGG 0.243448 tig0018513:-228228 None:intergenic
CCGAACTCGTTCTTTGACTA+TGG 0.262819 tig0018513:+227984 Msa1367560:CDS
TGGAGGTAGGAGAGATATTA+TGG 0.268158 tig0018513:+229041 Msa1367560:CDS
CATTGACTATGTTGGTTCTT+GGG 0.275476 tig0018513:+228287 Msa1367560:CDS
GTTTCATTGGTGGCAGCTTT+AGG 0.281598 tig0018513:-228718 None:intergenic
CTGCTGCTGAGAAGGTCTTT+AGG 0.282740 tig0018513:+229460 Msa1367560:CDS
TGCTGCTGAGAAGGTCTTTA+GGG 0.286640 tig0018513:+229461 Msa1367560:CDS
CTTGATGATCTTCTCTTTGC+CGG 0.295779 tig0018513:-228602 None:intergenic
CGCAAGGAACTAAGAAAATC+AGG 0.299535 tig0018513:-228862 None:intergenic
ATATGTGGTGGGCATATAAA+TGG 0.309935 tig0018513:+229249 Msa1367560:CDS
TTCCCCAGAGTTGTTATATC+AGG 0.310573 tig0018513:-228985 None:intergenic
ACATTGACTATGTTGGTTCT+TGG 0.314847 tig0018513:+228286 Msa1367560:CDS
ATGGCTGCTTCGGGTATTGC+AGG 0.331193 tig0018513:+227910 Msa1367560:CDS
CAAGTTTGCTAAGTTCTTCT+GGG 0.335783 tig0018513:+229341 Msa1367560:CDS
AGAAACTCTGAAGCGTATTA+AGG 0.338134 tig0018513:+229140 Msa1367560:CDS
GAACCTGTTGTTGGAAATTC+CGG 0.340485 tig0018513:+228823 Msa1367560:CDS
GTTAGCAGAAGGTGTCTATT+TGG 0.340874 tig0018513:+229368 Msa1367560:CDS
GAATACTTGGACAAAATTAC+AGG 0.342820 tig0018513:+229177 Msa1367560:CDS
ATGGTCAGATTTGTCAATTC+CGG 0.345817 tig0018513:+228535 Msa1367560:CDS
GGCATATAAATGGGATGTTT+GGG 0.350134 tig0018513:+229259 Msa1367560:CDS
GGGCATATAAATGGGATGTT+TGG 0.352503 tig0018513:+229258 Msa1367560:CDS
GCACCTTCACAGTTTGAGGC+TGG 0.354758 tig0018513:+229390 Msa1367560:CDS
TCATTCTGAAATGGCTGCTT+CGG 0.355637 tig0018513:+227900 Msa1367560:exon
TCCAAGTATTCATAAGTTCC+TGG 0.359322 tig0018513:-229165 None:intergenic
TTAGGAACACCAGGGGAATC+AGG 0.388149 tig0018513:-228700 None:intergenic
TTTGGCACCTTCACAGTTTG+AGG 0.388856 tig0018513:+229386 Msa1367560:CDS
GGCTGTAAGGGTTTCATTGG+TGG 0.391375 tig0018513:-228728 None:intergenic
GAACTAAGAAAATCAGGTTT+AGG 0.397600 tig0018513:-228856 None:intergenic
TACGGCTATCTCTCCTTTGT+TGG 0.403214 tig0018513:-228791 None:intergenic
CATTCTGAAATGGCTGCTTC+GGG 0.408622 tig0018513:+227901 Msa1367560:exon
TATTGGTCACGCTGATGATC+AGG 0.409676 tig0018513:+228320 Msa1367560:CDS
TGCTGTTCCCAGCATTGAAA+TGG 0.417543 tig0018513:+228516 Msa1367560:CDS
CCAGAAGAACTTAGCAAACT+TGG 0.420091 tig0018513:-229340 None:intergenic
TTTCTTGTTAAGGCAGGTAG+TGG 0.428022 tig0018513:+228658 Msa1367560:CDS
ATGAAGAAAGGAACCAGCTT+TGG 0.429438 tig0018513:+228448 Msa1367560:CDS
GACGTTGAGTGGGAATCCTT+TGG 0.430505 tig0018513:+229101 Msa1367560:CDS
GTCTTCCTCGAACCTGTTGT+TGG 0.431603 tig0018513:+228814 Msa1367560:CDS
CACCTTCACAGTTTGAGGCT+GGG 0.433643 tig0018513:+229391 Msa1367560:CDS
TCTTATCTATCATTCTGAAA+TGG 0.436545 tig0018513:+227891 Msa1367560:exon
CTACCTGCCTTAACAAGAAA+AGG 0.436782 tig0018513:-228655 None:intergenic
GGTTTGCCAGTAGGTGCATA+TGG 0.445263 tig0018513:+229021 Msa1367560:CDS
AAACCGGAATTTCCAACAAC+AGG 0.445497 tig0018513:-228826 None:intergenic
ACAACTCTGGGGAAGATCAT+TGG 0.450763 tig0018513:+228994 Msa1367560:CDS
CCACATGCGAGCACCTTTGA+CGG 0.452870 tig0018513:-228244 None:intergenic
ACTGGATTCCGTTTGTCGTA+TGG 0.457113 tig0018513:+228934 Msa1367560:CDS
TCAGCGTGACCAATAATTGC+AGG 0.459493 tig0018513:-228312 None:intergenic
ATTGACTATGTTGGTTCTTG+GGG 0.459541 tig0018513:+228288 Msa1367560:CDS
TGAGGCTGGGTTCACCAGCT+TGG 0.460390 tig0018513:+229404 Msa1367560:CDS
AAATCTGACCATTTCAATGC+TGG 0.463786 tig0018513:-228524 None:intergenic
CGCCTTGCCCGTGCTTATAC+CGG 0.463976 tig0018513:+228583 Msa1367560:CDS
AACTCCTGATATAACAACTC+TGG 0.465327 tig0018513:+228981 Msa1367560:CDS
CAGGGGAATCAGGAAGTCCT+AGG 0.466845 tig0018513:-228690 None:intergenic
TTTGATTAGGAATTGATGCC+TGG 0.467656 tig0018513:+228159 Msa1367560:intron
ACTCCTGATATAACAACTCT+GGG 0.468947 tig0018513:+228982 Msa1367560:CDS
ATTATCATTGATTCCGTCAA+AGG 0.468966 tig0018513:+228231 Msa1367560:CDS
ATGGAGACCGTGGCTCCGGC+TGG 0.468994 tig0018513:+229060 Msa1367560:CDS
AGAGAAGATCATCAAGTTTG+AGG 0.471292 tig0018513:+228609 Msa1367560:CDS
ATTACAGGTGAGCTTGTTCA+AGG 0.477356 tig0018513:+229192 Msa1367560:CDS
AAGACAAGGTGCACCAAAGC+TGG 0.477394 tig0018513:-228461 None:intergenic
GAGAAGATCATCAAGTTTGA+GGG 0.481387 tig0018513:+228610 Msa1367560:CDS
GACCATTGCTGCTGCTGAGA+AGG 0.485730 tig0018513:+229452 Msa1367560:CDS
CTCTTTGCCGGTATAAGCAC+GGG 0.486208 tig0018513:-228590 None:intergenic
TTCGGTGCTGGGCTTCTGGT+CGG 0.486793 tig0018513:-228016 None:intergenic
GTTCAAGGCATTGTTGAAGC+TGG 0.489925 tig0018513:+229207 Msa1367560:CDS
AACCAACATAGTCAATGTAT+TGG 0.491453 tig0018513:-228281 None:intergenic
ACTGATTTGAAAGCACGAAC+AGG 0.495762 tig0018513:-228195 None:intergenic
AAGAAGAGAAGCAATTGAGA+AGG 0.496897 tig0018513:-227939 None:intergenic
GTGTTTGATGAAGTTATGAC+TGG 0.497336 tig0018513:+228916 Msa1367560:CDS
GCCAGGAACTTATGAATACT+TGG 0.499909 tig0018513:+229164 Msa1367560:CDS
AGGAAATAACATGAAGATGC+AGG 0.500720 tig0018513:-229714 None:intergenic
GCTGGACCTATGTACCAGGC+TGG 0.502027 tig0018513:+229078 Msa1367560:CDS
AACAGCAGCAAAGTCATTGA+AGG 0.503512 tig0018513:-228752 None:intergenic
CCATAGTCAAAGAACGAGTT+CGG 0.503585 tig0018513:-227984 None:intergenic
AATCCTTTGGCAATGACTGC+AGG 0.505080 tig0018513:+229114 Msa1367560:CDS
AGAAGAGAAGCAATTGAGAA+GGG 0.505692 tig0018513:-227938 None:intergenic
TTCCGGCACAGAAGCATGCA+TGG 0.507223 tig0018513:+228552 Msa1367560:CDS
GTTCGTGCTTTCAAATCAGT+TGG 0.507920 tig0018513:+228198 Msa1367560:CDS
GAGCACCTCCATACGACAAA+CGG 0.508625 tig0018513:-228942 None:intergenic
GTTGAAGCTGGTAAGAAGGC+AGG 0.509704 tig0018513:+229219 Msa1367560:CDS
AACCAATACATTGACTATGT+TGG 0.510475 tig0018513:+228279 Msa1367560:CDS
ACAGGAGAGTTCACACCTCC+AGG 0.510938 tig0018513:-228177 None:intergenic
TATTATGGAGACCGTGGCTC+CGG 0.513114 tig0018513:+229056 Msa1367560:CDS
AACGTCCCAGCCTGGTACAT+AGG 0.518158 tig0018513:-229084 None:intergenic
GCCTGGTACATAGGTCCAGC+CGG 0.518203 tig0018513:-229075 None:intergenic
TTCTGGGGTATGTTAGCAGA+AGG 0.519712 tig0018513:+229357 Msa1367560:CDS
GACCTTCTCAGCAGCAGCAA+TGG 0.522852 tig0018513:-229454 None:intergenic
CTAGGACTTCCTGATTCCCC+TGG 0.524552 tig0018513:+228691 Msa1367560:CDS
GGTGCTGGGCTTCTGGTCGG+TGG 0.527286 tig0018513:-228013 None:intergenic
TGAAAACACTCTAGCTGAGA+TGG 0.530589 tig0018513:+228486 Msa1367560:CDS
CTACCTCCATATGCACCTAC+TGG 0.530999 tig0018513:-229027 None:intergenic
CGTGCTTTCAAATCAGTTGG+TGG 0.531486 tig0018513:+228201 Msa1367560:CDS
CCGTCAAAGGTGCTCGCATG+TGG 0.532480 tig0018513:+228244 Msa1367560:CDS
TACCAGGCTGGGACGTTGAG+TGG 0.532692 tig0018513:+229090 Msa1367560:CDS
GAGAAGGGCATTGTTCTCCT+TGG 0.539822 tig0018513:-228893 None:intergenic
CATTGTTGAAGCTGGTAAGA+AGG 0.540418 tig0018513:+229215 Msa1367560:CDS
AGGTTTAGGAGTAATGAAAC+CGG 0.540434 tig0018513:-228842 None:intergenic
GGAGGTGCTCAACAATACTT+TGG 0.540803 tig0018513:+228955 Msa1367560:CDS
CTGAAGCGTATTAAGGAGCC+AGG 0.542721 tig0018513:+229147 Msa1367560:CDS
CTGGACCTATGTACCAGGCT+GGG 0.542962 tig0018513:+229079 Msa1367560:CDS
AATTTCCAACAACAGGTTCG+AGG 0.544211 tig0018513:-228819 None:intergenic
TGCCGGTATAAGCACGGGCA+AGG 0.545023 tig0018513:-228585 None:intergenic
CTTCCTGTATCTAGTCTCAT+CGG 0.545827 tig0018513:+229613 Msa1367560:three_prime_UTR
ATCAGAAGTATGTGCCAAGC+TGG 0.549286 tig0018513:-229418 None:intergenic
TCCGGCTGGACCTATGTACC+AGG 0.550164 tig0018513:+229074 Msa1367560:CDS
AATCTGACCATTTCAATGCT+GGG 0.551104 tig0018513:-228523 None:intergenic
GCTCGCATGTGGGACATTGA+TGG 0.552562 tig0018513:+228255 Msa1367560:CDS
GGTAGTGGAGTTGCCACCCT+AGG 0.552592 tig0018513:+228673 Msa1367560:CDS
TCCCACTCAACGTCCCAGCC+TGG 0.554590 tig0018513:-229092 None:intergenic
ACCCATGCATGCTTCTGTGC+CGG 0.554652 tig0018513:-228554 None:intergenic
CTTGCTGAGACAATGAAGAA+AGG 0.555611 tig0018513:+228436 Msa1367560:CDS
TCTCTTTGCCGGTATAAGCA+CGG 0.568722 tig0018513:-228591 None:intergenic
CATAGGTCCAGCCGGAGCCA+CGG 0.570397 tig0018513:-229067 None:intergenic
GTGGCAGCTTTAGGAACACC+AGG 0.571077 tig0018513:-228709 None:intergenic
ACACCGATGAGACTAGATAC+AGG 0.575451 tig0018513:-229616 None:intergenic
ACAGCAGCAAAGTCATTGAA+GGG 0.578728 tig0018513:-228751 None:intergenic
GCAGGGCATGCAATATGTGG+TGG 0.581592 tig0018513:+229237 Msa1367560:CDS
TATGTGGTGGGCATATAAAT+GGG 0.582602 tig0018513:+229250 Msa1367560:CDS
AAGTTTGCTAAGTTCTTCTG+GGG 0.584115 tig0018513:+229342 Msa1367560:CDS
TAACTTCATCAAACACGAGA+AGG 0.585499 tig0018513:-228909 None:intergenic
TTGAAGCTGGTAAGAAGGCA+GGG 0.585619 tig0018513:+229220 Msa1367560:CDS
TGGCTGCTTCGGGTATTGCA+GGG 0.586719 tig0018513:+227911 Msa1367560:CDS
AGGGGAATCAGGAAGTCCTA+GGG 0.587377 tig0018513:-228689 None:intergenic
GGATTCCGTTTGTCGTATGG+AGG 0.588634 tig0018513:+228937 Msa1367560:CDS
AAGTTTGAGGGATGTTATCA+CGG 0.591307 tig0018513:+228622 Msa1367560:CDS
AAGGCAGGGCATGCAATATG+TGG 0.593656 tig0018513:+229234 Msa1367560:CDS
CTTCATTGTCTCAGCAAGAG+CGG 0.594962 tig0018513:-228431 None:intergenic
ATGCCTGCAGTCATTGCCAA+AGG 0.596171 tig0018513:-229117 None:intergenic
ACTCTGGGGAAGATCATTGG+AGG 0.600178 tig0018513:+228997 Msa1367560:CDS
CAGTAGGTGCATATGGAGGT+AGG 0.601307 tig0018513:+229028 Msa1367560:CDS
AGAAGCTTTCGCAGCTGCAA+AGG 0.604865 tig0018513:+228062 Msa1367560:CDS
CAGGGCATGCAATATGTGGT+GGG 0.605835 tig0018513:+229238 Msa1367560:CDS
ACCAGGCTGGGACGTTGAGT+GGG 0.609650 tig0018513:+229091 Msa1367560:CDS
CTGGGGAAGATCATTGGAGG+GGG 0.612965 tig0018513:+229000 Msa1367560:CDS
AACTTCATCAAACACGAGAA+GGG 0.614126 tig0018513:-228908 None:intergenic
TCCGGCACAGAAGCATGCAT+GGG 0.618306 tig0018513:+228553 Msa1367560:CDS
AACAGGTTCGAGGAAGACTA+CGG 0.621214 tig0018513:-228809 None:intergenic
CGTCAAAGGTGCTCGCATGT+GGG 0.625959 tig0018513:+228245 Msa1367560:CDS
AACCCAGCCTCAAACTGTGA+AGG 0.634803 tig0018513:-229393 None:intergenic
AAGATCTTTGAAGCCAACAA+AGG 0.638698 tig0018513:+228778 Msa1367560:CDS
GCATCTGTGAAATTGTACAC+AGG 0.641026 tig0018513:-229300 None:intergenic
GGAATCAGGAAGTCCTAGGG+TGG 0.643441 tig0018513:-228686 None:intergenic
CGGTATAAGCACGGGCAAGG+CGG 0.653099 tig0018513:-228582 None:intergenic
CAGCAGCAAAGTCATTGAAG+GGG 0.654908 tig0018513:-228750 None:intergenic
GAGAGATATTATGGAGACCG+TGG 0.661183 tig0018513:+229050 Msa1367560:CDS
TCTGGGGAAGATCATTGGAG+GGG 0.662523 tig0018513:+228999 Msa1367560:CDS
AGCAGCAAAGTCATTGAAGG+GGG 0.664856 tig0018513:-228749 None:intergenic
CTCTGGGGAAGATCATTGGA+GGG 0.675119 tig0018513:+228998 Msa1367560:CDS
TAACAAGAAAAGGATCAGCA+TGG 0.678181 tig0018513:-228645 None:intergenic
TTCCTTGCGCAAAATCACCA+AGG 0.686509 tig0018513:+228876 Msa1367560:CDS
TTGCCAGTAGGTGCATATGG+AGG 0.697062 tig0018513:+229024 Msa1367560:CDS
GGCAGCTTTAGGAACACCAG+GGG 0.703847 tig0018513:-228707 None:intergenic
TGGCAGCTTTAGGAACACCA+GGG 0.708271 tig0018513:-228708 None:intergenic
AGGCATTATAAGTCGAACAA+CGG 0.716492 tig0018513:-229694 None:intergenic
GATTAGGAATTGATGCCTGG+AGG 0.717601 tig0018513:+228162 Msa1367560:intron
CTCCTGATATAACAACTCTG+GGG 0.744293 tig0018513:+228983 Msa1367560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAACATAAAAGTTTGA+AGG - tig0018513:228400-228419 None:intergenic 15.0%
!!! AAACTTTTATGTTTAATTTC+AGG + tig0018513:228402-228421 Msa1367560:intron 15.0%
!!! ATTGATTTTTATAGTTTTGT+AGG + tig0018513:229532-229551 Msa1367560:three_prime_UTR 15.0%
!! ATTAGATCTATGTATTATTA+TGG + tig0018513:229559-229578 Msa1367560:three_prime_UTR 15.0%
!! AATTAAACATAAAAGTTTGA+AGG - tig0018513:228400-228419 None:intergenic 15.0%
!!! AAACTTTTATGTTTAATTTC+AGG + tig0018513:228402-228421 Msa1367560:intron 15.0%
!!! ATTGATTTTTATAGTTTTGT+AGG + tig0018513:229532-229551 Msa1367560:three_prime_UTR 15.0%
!! ATTAGATCTATGTATTATTA+TGG + tig0018513:229559-229578 Msa1367560:three_prime_UTR 15.0%
!!! ATGTAATAATCGATTTGATT+AGG + tig0018513:228146-228165 Msa1367560:intron 20.0%
!!! ATGTAATAATCGATTTGATT+AGG + tig0018513:228146-228165 Msa1367560:intron 20.0%
!! TCTTATCTATCATTCTGAAA+TGG + tig0018513:227891-227910 Msa1367560:exon 25.0%
! AATATATGAGAGAATTGAAG+AGG - tig0018513:228365-228384 None:intergenic 25.0%
!! TCTTATCTATCATTCTGAAA+TGG + tig0018513:227891-227910 Msa1367560:exon 25.0%
! AATATATGAGAGAATTGAAG+AGG - tig0018513:228365-228384 None:intergenic 25.0%
TTGACGGAATCAATGATAAT+TGG - tig0018513:228231-228250 None:intergenic 30.0%
!! ATTATCATTGATTCCGTCAA+AGG + tig0018513:228231-228250 Msa1367560:CDS 30.0%
! AACCAATACATTGACTATGT+TGG + tig0018513:228279-228298 Msa1367560:CDS 30.0%
AACCAACATAGTCAATGTAT+TGG - tig0018513:228284-228303 None:intergenic 30.0%
GAACTAAGAAAATCAGGTTT+AGG - tig0018513:228859-228878 None:intergenic 30.0%
GAATACTTGGACAAAATTAC+AGG + tig0018513:229177-229196 Msa1367560:CDS 30.0%
TTGACGGAATCAATGATAAT+TGG - tig0018513:228231-228250 None:intergenic 30.0%
!! ATTATCATTGATTCCGTCAA+AGG + tig0018513:228231-228250 Msa1367560:CDS 30.0%
! AACCAATACATTGACTATGT+TGG + tig0018513:228279-228298 Msa1367560:CDS 30.0%
AACCAACATAGTCAATGTAT+TGG - tig0018513:228284-228303 None:intergenic 30.0%
GAACTAAGAAAATCAGGTTT+AGG - tig0018513:228859-228878 None:intergenic 30.0%
GAATACTTGGACAAAATTAC+AGG + tig0018513:229177-229196 Msa1367560:CDS 30.0%
AGAAGAGAAGCAATTGAGAA+GGG - tig0018513:227941-227960 None:intergenic 35.0%
AAGAAGAGAAGCAATTGAGA+AGG - tig0018513:227942-227961 None:intergenic 35.0%
! TTTGCGAAGAGTGAGTTTTT+CGG - tig0018513:228037-228056 None:intergenic 35.0%
TTTGATTAGGAATTGATGCC+TGG + tig0018513:228159-228178 Msa1367560:intron 35.0%
!! ACATTGACTATGTTGGTTCT+TGG + tig0018513:228286-228305 Msa1367560:CDS 35.0%
!! CATTGACTATGTTGGTTCTT+GGG + tig0018513:228287-228306 Msa1367560:CDS 35.0%
!! ATTGACTATGTTGGTTCTTG+GGG + tig0018513:228288-228307 Msa1367560:CDS 35.0%
!! AGAGTGTTTTCAAGAAGACA+AGG - tig0018513:228478-228497 None:intergenic 35.0%
AATCTGACCATTTCAATGCT+GGG - tig0018513:228526-228545 None:intergenic 35.0%
AAATCTGACCATTTCAATGC+TGG - tig0018513:228527-228546 None:intergenic 35.0%
ATGGTCAGATTTGTCAATTC+CGG + tig0018513:228535-228554 Msa1367560:CDS 35.0%
AGAGAAGATCATCAAGTTTG+AGG + tig0018513:228609-228628 Msa1367560:CDS 35.0%
GAGAAGATCATCAAGTTTGA+GGG + tig0018513:228610-228629 Msa1367560:CDS 35.0%
AAGTTTGAGGGATGTTATCA+CGG + tig0018513:228622-228641 Msa1367560:CDS 35.0%
TAACAAGAAAAGGATCAGCA+TGG - tig0018513:228648-228667 None:intergenic 35.0%
! TGCTGATCCTTTTCTTGTTA+AGG + tig0018513:228648-228667 Msa1367560:CDS 35.0%
!! AAGATCTTTGAAGCCAACAA+AGG + tig0018513:228778-228797 Msa1367560:CDS 35.0%
AGGTTTAGGAGTAATGAAAC+CGG - tig0018513:228845-228864 None:intergenic 35.0%
AACTTCATCAAACACGAGAA+GGG - tig0018513:228911-228930 None:intergenic 35.0%
TAACTTCATCAAACACGAGA+AGG - tig0018513:228912-228931 None:intergenic 35.0%
GTGTTTGATGAAGTTATGAC+TGG + tig0018513:228916-228935 Msa1367560:CDS 35.0%
AACTCCTGATATAACAACTC+TGG + tig0018513:228981-229000 Msa1367560:CDS 35.0%
ACTCCTGATATAACAACTCT+GGG + tig0018513:228982-229001 Msa1367560:CDS 35.0%
!! AGAAACTCTGAAGCGTATTA+AGG + tig0018513:229140-229159 Msa1367560:CDS 35.0%
TCCAAGTATTCATAAGTTCC+TGG - tig0018513:229168-229187 None:intergenic 35.0%
!! ATATGTGGTGGGCATATAAA+TGG + tig0018513:229249-229268 Msa1367560:CDS 35.0%
!! TATGTGGTGGGCATATAAAT+GGG + tig0018513:229250-229269 Msa1367560:CDS 35.0%
GGCATATAAATGGGATGTTT+GGG + tig0018513:229259-229278 Msa1367560:CDS 35.0%
!! TTTGGGTTTTTCTTCACAGA+AGG + tig0018513:229276-229295 Msa1367560:CDS 35.0%
!! CAAGTTTGCTAAGTTCTTCT+GGG + tig0018513:229341-229360 Msa1367560:CDS 35.0%
!! AAGTTTGCTAAGTTCTTCTG+GGG + tig0018513:229342-229361 Msa1367560:CDS 35.0%
AGGCATTATAAGTCGAACAA+CGG - tig0018513:229697-229716 None:intergenic 35.0%
AGAAGAGAAGCAATTGAGAA+GGG - tig0018513:227941-227960 None:intergenic 35.0%
AAGAAGAGAAGCAATTGAGA+AGG - tig0018513:227942-227961 None:intergenic 35.0%
! TTTGCGAAGAGTGAGTTTTT+CGG - tig0018513:228037-228056 None:intergenic 35.0%
TTTGATTAGGAATTGATGCC+TGG + tig0018513:228159-228178 Msa1367560:intron 35.0%
!! ACATTGACTATGTTGGTTCT+TGG + tig0018513:228286-228305 Msa1367560:CDS 35.0%
!! CATTGACTATGTTGGTTCTT+GGG + tig0018513:228287-228306 Msa1367560:CDS 35.0%
!! ATTGACTATGTTGGTTCTTG+GGG + tig0018513:228288-228307 Msa1367560:CDS 35.0%
!! AGAGTGTTTTCAAGAAGACA+AGG - tig0018513:228478-228497 None:intergenic 35.0%
AATCTGACCATTTCAATGCT+GGG - tig0018513:228526-228545 None:intergenic 35.0%
AAATCTGACCATTTCAATGC+TGG - tig0018513:228527-228546 None:intergenic 35.0%
ATGGTCAGATTTGTCAATTC+CGG + tig0018513:228535-228554 Msa1367560:CDS 35.0%
AGAGAAGATCATCAAGTTTG+AGG + tig0018513:228609-228628 Msa1367560:CDS 35.0%
GAGAAGATCATCAAGTTTGA+GGG + tig0018513:228610-228629 Msa1367560:CDS 35.0%
AAGTTTGAGGGATGTTATCA+CGG + tig0018513:228622-228641 Msa1367560:CDS 35.0%
TAACAAGAAAAGGATCAGCA+TGG - tig0018513:228648-228667 None:intergenic 35.0%
! TGCTGATCCTTTTCTTGTTA+AGG + tig0018513:228648-228667 Msa1367560:CDS 35.0%
!! AAGATCTTTGAAGCCAACAA+AGG + tig0018513:228778-228797 Msa1367560:CDS 35.0%
AGGTTTAGGAGTAATGAAAC+CGG - tig0018513:228845-228864 None:intergenic 35.0%
AACTTCATCAAACACGAGAA+GGG - tig0018513:228911-228930 None:intergenic 35.0%
TAACTTCATCAAACACGAGA+AGG - tig0018513:228912-228931 None:intergenic 35.0%
GTGTTTGATGAAGTTATGAC+TGG + tig0018513:228916-228935 Msa1367560:CDS 35.0%
AACTCCTGATATAACAACTC+TGG + tig0018513:228981-229000 Msa1367560:CDS 35.0%
ACTCCTGATATAACAACTCT+GGG + tig0018513:228982-229001 Msa1367560:CDS 35.0%
!! AGAAACTCTGAAGCGTATTA+AGG + tig0018513:229140-229159 Msa1367560:CDS 35.0%
TCCAAGTATTCATAAGTTCC+TGG - tig0018513:229168-229187 None:intergenic 35.0%
!! ATATGTGGTGGGCATATAAA+TGG + tig0018513:229249-229268 Msa1367560:CDS 35.0%
!! TATGTGGTGGGCATATAAAT+GGG + tig0018513:229250-229269 Msa1367560:CDS 35.0%
GGCATATAAATGGGATGTTT+GGG + tig0018513:229259-229278 Msa1367560:CDS 35.0%
!! TTTGGGTTTTTCTTCACAGA+AGG + tig0018513:229276-229295 Msa1367560:CDS 35.0%
!! CAAGTTTGCTAAGTTCTTCT+GGG + tig0018513:229341-229360 Msa1367560:CDS 35.0%
!! AAGTTTGCTAAGTTCTTCTG+GGG + tig0018513:229342-229361 Msa1367560:CDS 35.0%
AGGCATTATAAGTCGAACAA+CGG - tig0018513:229697-229716 None:intergenic 35.0%
!! TCATTCTGAAATGGCTGCTT+CGG + tig0018513:227900-227919 Msa1367560:exon 40.0%
CCATAGTCAAAGAACGAGTT+CGG - tig0018513:227987-228006 None:intergenic 40.0%
!! ACTGATTTGAAAGCACGAAC+AGG - tig0018513:228198-228217 None:intergenic 40.0%
GTTCGTGCTTTCAAATCAGT+TGG + tig0018513:228198-228217 Msa1367560:CDS 40.0%
CTTGCTGAGACAATGAAGAA+AGG + tig0018513:228436-228455 Msa1367560:CDS 40.0%
ATGAAGAAAGGAACCAGCTT+TGG + tig0018513:228448-228467 Msa1367560:CDS 40.0%
TGAAAACACTCTAGCTGAGA+TGG + tig0018513:228486-228505 Msa1367560:CDS 40.0%
! CTTGATGATCTTCTCTTTGC+CGG - tig0018513:228605-228624 None:intergenic 40.0%
! GATCCTTTTCTTGTTAAGGC+AGG + tig0018513:228652-228671 Msa1367560:CDS 40.0%
CTACCTGCCTTAACAAGAAA+AGG - tig0018513:228658-228677 None:intergenic 40.0%
TTTCTTGTTAAGGCAGGTAG+TGG + tig0018513:228658-228677 Msa1367560:CDS 40.0%
ACAGCAGCAAAGTCATTGAA+GGG - tig0018513:228754-228773 None:intergenic 40.0%
AACAGCAGCAAAGTCATTGA+AGG - tig0018513:228755-228774 None:intergenic 40.0%
AATTTCCAACAACAGGTTCG+AGG - tig0018513:228822-228841 None:intergenic 40.0%
GAACCTGTTGTTGGAAATTC+CGG + tig0018513:228823-228842 Msa1367560:CDS 40.0%
AAACCGGAATTTCCAACAAC+AGG - tig0018513:228829-228848 None:intergenic 40.0%
CGCAAGGAACTAAGAAAATC+AGG - tig0018513:228865-228884 None:intergenic 40.0%
CTCCTGATATAACAACTCTG+GGG + tig0018513:228983-229002 Msa1367560:CDS 40.0%
TTCCCCAGAGTTGTTATATC+AGG - tig0018513:228988-229007 None:intergenic 40.0%
TGGAGGTAGGAGAGATATTA+TGG + tig0018513:229041-229060 Msa1367560:CDS 40.0%
GCCAGGAACTTATGAATACT+TGG + tig0018513:229164-229183 Msa1367560:CDS 40.0%
! ATTACAGGTGAGCTTGTTCA+AGG + tig0018513:229192-229211 Msa1367560:CDS 40.0%
CATTGTTGAAGCTGGTAAGA+AGG + tig0018513:229215-229234 Msa1367560:CDS 40.0%
GGGCATATAAATGGGATGTT+TGG + tig0018513:229258-229277 Msa1367560:CDS 40.0%
GCATCTGTGAAATTGTACAC+AGG - tig0018513:229303-229322 None:intergenic 40.0%
CCAGAAGAACTTAGCAAACT+TGG - tig0018513:229343-229362 None:intergenic 40.0%
!! CCAAGTTTGCTAAGTTCTTC+TGG + tig0018513:229340-229359 Msa1367560:CDS 40.0%
!! GTTAGCAGAAGGTGTCTATT+TGG + tig0018513:229368-229387 Msa1367560:CDS 40.0%
CTTCCTGTATCTAGTCTCAT+CGG + tig0018513:229613-229632 Msa1367560:three_prime_UTR 40.0%
!! TCATTCTGAAATGGCTGCTT+CGG + tig0018513:227900-227919 Msa1367560:exon 40.0%
CCATAGTCAAAGAACGAGTT+CGG - tig0018513:227987-228006 None:intergenic 40.0%
!! ACTGATTTGAAAGCACGAAC+AGG - tig0018513:228198-228217 None:intergenic 40.0%
GTTCGTGCTTTCAAATCAGT+TGG + tig0018513:228198-228217 Msa1367560:CDS 40.0%
CTTGCTGAGACAATGAAGAA+AGG + tig0018513:228436-228455 Msa1367560:CDS 40.0%
ATGAAGAAAGGAACCAGCTT+TGG + tig0018513:228448-228467 Msa1367560:CDS 40.0%
TGAAAACACTCTAGCTGAGA+TGG + tig0018513:228486-228505 Msa1367560:CDS 40.0%
! CTTGATGATCTTCTCTTTGC+CGG - tig0018513:228605-228624 None:intergenic 40.0%
! GATCCTTTTCTTGTTAAGGC+AGG + tig0018513:228652-228671 Msa1367560:CDS 40.0%
CTACCTGCCTTAACAAGAAA+AGG - tig0018513:228658-228677 None:intergenic 40.0%
TTTCTTGTTAAGGCAGGTAG+TGG + tig0018513:228658-228677 Msa1367560:CDS 40.0%
ACAGCAGCAAAGTCATTGAA+GGG - tig0018513:228754-228773 None:intergenic 40.0%
AACAGCAGCAAAGTCATTGA+AGG - tig0018513:228755-228774 None:intergenic 40.0%
AATTTCCAACAACAGGTTCG+AGG - tig0018513:228822-228841 None:intergenic 40.0%
GAACCTGTTGTTGGAAATTC+CGG + tig0018513:228823-228842 Msa1367560:CDS 40.0%
AAACCGGAATTTCCAACAAC+AGG - tig0018513:228829-228848 None:intergenic 40.0%
CGCAAGGAACTAAGAAAATC+AGG - tig0018513:228865-228884 None:intergenic 40.0%
CTCCTGATATAACAACTCTG+GGG + tig0018513:228983-229002 Msa1367560:CDS 40.0%
TTCCCCAGAGTTGTTATATC+AGG - tig0018513:228988-229007 None:intergenic 40.0%
TGGAGGTAGGAGAGATATTA+TGG + tig0018513:229041-229060 Msa1367560:CDS 40.0%
GCCAGGAACTTATGAATACT+TGG + tig0018513:229164-229183 Msa1367560:CDS 40.0%
! ATTACAGGTGAGCTTGTTCA+AGG + tig0018513:229192-229211 Msa1367560:CDS 40.0%
CATTGTTGAAGCTGGTAAGA+AGG + tig0018513:229215-229234 Msa1367560:CDS 40.0%
GGGCATATAAATGGGATGTT+TGG + tig0018513:229258-229277 Msa1367560:CDS 40.0%
GCATCTGTGAAATTGTACAC+AGG - tig0018513:229303-229322 None:intergenic 40.0%
CCAGAAGAACTTAGCAAACT+TGG - tig0018513:229343-229362 None:intergenic 40.0%
!! CCAAGTTTGCTAAGTTCTTC+TGG + tig0018513:229340-229359 Msa1367560:CDS 40.0%
!! GTTAGCAGAAGGTGTCTATT+TGG + tig0018513:229368-229387 Msa1367560:CDS 40.0%
CTTCCTGTATCTAGTCTCAT+CGG + tig0018513:229613-229632 Msa1367560:three_prime_UTR 40.0%
!! CATTCTGAAATGGCTGCTTC+GGG + tig0018513:227901-227920 Msa1367560:exon 45.0%
CCGAACTCGTTCTTTGACTA+TGG + tig0018513:227984-228003 Msa1367560:CDS 45.0%
!!! AGAGTGAGTTTTTCGGTGCT+GGG - tig0018513:228030-228049 None:intergenic 45.0%
!! AAGAGTGAGTTTTTCGGTGC+TGG - tig0018513:228031-228050 None:intergenic 45.0%
GATTAGGAATTGATGCCTGG+AGG + tig0018513:228162-228181 Msa1367560:intron 45.0%
CGTGCTTTCAAATCAGTTGG+TGG + tig0018513:228201-228220 Msa1367560:CDS 45.0%
TCTTGGGGTCCTGCAATTAT+TGG + tig0018513:228303-228322 Msa1367560:CDS 45.0%
TCAGCGTGACCAATAATTGC+AGG - tig0018513:228315-228334 None:intergenic 45.0%
TATTGGTCACGCTGATGATC+AGG + tig0018513:228320-228339 Msa1367560:CDS 45.0%
CTTCATTGTCTCAGCAAGAG+CGG - tig0018513:228434-228453 None:intergenic 45.0%
! TGCTGTTCCCAGCATTGAAA+TGG + tig0018513:228516-228535 Msa1367560:CDS 45.0%
TCTCTTTGCCGGTATAAGCA+CGG - tig0018513:228594-228613 None:intergenic 45.0%
! GTTTCATTGGTGGCAGCTTT+AGG - tig0018513:228721-228740 None:intergenic 45.0%
AGCAGCAAAGTCATTGAAGG+GGG - tig0018513:228752-228771 None:intergenic 45.0%
CAGCAGCAAAGTCATTGAAG+GGG - tig0018513:228753-228772 None:intergenic 45.0%
TACGGCTATCTCTCCTTTGT+TGG - tig0018513:228794-228813 None:intergenic 45.0%
AACAGGTTCGAGGAAGACTA+CGG - tig0018513:228812-228831 None:intergenic 45.0%
TTCCTTGCGCAAAATCACCA+AGG + tig0018513:228876-228895 Msa1367560:CDS 45.0%
ACTGGATTCCGTTTGTCGTA+TGG + tig0018513:228934-228953 Msa1367560:CDS 45.0%
!! GGAGGTGCTCAACAATACTT+TGG + tig0018513:228955-228974 Msa1367560:CDS 45.0%
! ACAACTCTGGGGAAGATCAT+TGG + tig0018513:228994-229013 Msa1367560:CDS 45.0%
GAGAGATATTATGGAGACCG+TGG + tig0018513:229050-229069 Msa1367560:CDS 45.0%
AATCCTTTGGCAATGACTGC+AGG + tig0018513:229114-229133 Msa1367560:CDS 45.0%
!! GTTCAAGGCATTGTTGAAGC+TGG + tig0018513:229207-229226 Msa1367560:CDS 45.0%
TTGAAGCTGGTAAGAAGGCA+GGG + tig0018513:229220-229239 Msa1367560:CDS 45.0%
!! TTCTGGGGTATGTTAGCAGA+AGG + tig0018513:229357-229376 Msa1367560:CDS 45.0%
TTTGGCACCTTCACAGTTTG+AGG + tig0018513:229386-229405 Msa1367560:CDS 45.0%
! ATCAGAAGTATGTGCCAAGC+TGG - tig0018513:229421-229440 None:intergenic 45.0%
TGCTGCTGAGAAGGTCTTTA+GGG + tig0018513:229461-229480 Msa1367560:CDS 45.0%
ACACCGATGAGACTAGATAC+AGG - tig0018513:229619-229638 None:intergenic 45.0%
!! CATTCTGAAATGGCTGCTTC+GGG + tig0018513:227901-227920 Msa1367560:exon 45.0%
CCGAACTCGTTCTTTGACTA+TGG + tig0018513:227984-228003 Msa1367560:CDS 45.0%
!!! AGAGTGAGTTTTTCGGTGCT+GGG - tig0018513:228030-228049 None:intergenic 45.0%
!! AAGAGTGAGTTTTTCGGTGC+TGG - tig0018513:228031-228050 None:intergenic 45.0%
GATTAGGAATTGATGCCTGG+AGG + tig0018513:228162-228181 Msa1367560:intron 45.0%
CGTGCTTTCAAATCAGTTGG+TGG + tig0018513:228201-228220 Msa1367560:CDS 45.0%
TCTTGGGGTCCTGCAATTAT+TGG + tig0018513:228303-228322 Msa1367560:CDS 45.0%
TCAGCGTGACCAATAATTGC+AGG - tig0018513:228315-228334 None:intergenic 45.0%
TATTGGTCACGCTGATGATC+AGG + tig0018513:228320-228339 Msa1367560:CDS 45.0%
CTTCATTGTCTCAGCAAGAG+CGG - tig0018513:228434-228453 None:intergenic 45.0%
! TGCTGTTCCCAGCATTGAAA+TGG + tig0018513:228516-228535 Msa1367560:CDS 45.0%
TCTCTTTGCCGGTATAAGCA+CGG - tig0018513:228594-228613 None:intergenic 45.0%
! GTTTCATTGGTGGCAGCTTT+AGG - tig0018513:228721-228740 None:intergenic 45.0%
AGCAGCAAAGTCATTGAAGG+GGG - tig0018513:228752-228771 None:intergenic 45.0%
CAGCAGCAAAGTCATTGAAG+GGG - tig0018513:228753-228772 None:intergenic 45.0%
TACGGCTATCTCTCCTTTGT+TGG - tig0018513:228794-228813 None:intergenic 45.0%
AACAGGTTCGAGGAAGACTA+CGG - tig0018513:228812-228831 None:intergenic 45.0%
TTCCTTGCGCAAAATCACCA+AGG + tig0018513:228876-228895 Msa1367560:CDS 45.0%
ACTGGATTCCGTTTGTCGTA+TGG + tig0018513:228934-228953 Msa1367560:CDS 45.0%
!! GGAGGTGCTCAACAATACTT+TGG + tig0018513:228955-228974 Msa1367560:CDS 45.0%
! ACAACTCTGGGGAAGATCAT+TGG + tig0018513:228994-229013 Msa1367560:CDS 45.0%
GAGAGATATTATGGAGACCG+TGG + tig0018513:229050-229069 Msa1367560:CDS 45.0%
AATCCTTTGGCAATGACTGC+AGG + tig0018513:229114-229133 Msa1367560:CDS 45.0%
!! GTTCAAGGCATTGTTGAAGC+TGG + tig0018513:229207-229226 Msa1367560:CDS 45.0%
TTGAAGCTGGTAAGAAGGCA+GGG + tig0018513:229220-229239 Msa1367560:CDS 45.0%
!! TTCTGGGGTATGTTAGCAGA+AGG + tig0018513:229357-229376 Msa1367560:CDS 45.0%
TTTGGCACCTTCACAGTTTG+AGG + tig0018513:229386-229405 Msa1367560:CDS 45.0%
! ATCAGAAGTATGTGCCAAGC+TGG - tig0018513:229421-229440 None:intergenic 45.0%
TGCTGCTGAGAAGGTCTTTA+GGG + tig0018513:229461-229480 Msa1367560:CDS 45.0%
ACACCGATGAGACTAGATAC+AGG - tig0018513:229619-229638 None:intergenic 45.0%
AGAAGCTTTCGCAGCTGCAA+AGG + tig0018513:228062-228081 Msa1367560:CDS 50.0%
AAGACAAGGTGCACCAAAGC+TGG - tig0018513:228464-228483 None:intergenic 50.0%
CTCTTTGCCGGTATAAGCAC+GGG - tig0018513:228593-228612 None:intergenic 50.0%
AGGGGAATCAGGAAGTCCTA+GGG - tig0018513:228692-228711 None:intergenic 50.0%
TTAGGAACACCAGGGGAATC+AGG - tig0018513:228703-228722 None:intergenic 50.0%
!! TGGCAGCTTTAGGAACACCA+GGG - tig0018513:228711-228730 None:intergenic 50.0%
GGCTGTAAGGGTTTCATTGG+TGG - tig0018513:228731-228750 None:intergenic 50.0%
GTCATTGAAGGGGGCTGTAA+GGG - tig0018513:228743-228762 None:intergenic 50.0%
AGTCATTGAAGGGGGCTGTA+AGG - tig0018513:228744-228763 None:intergenic 50.0%
GTCTTCCTCGAACCTGTTGT+TGG + tig0018513:228814-228833 Msa1367560:CDS 50.0%
!! CTCCTTGGTGATTTTGCGCA+AGG - tig0018513:228881-228900 None:intergenic 50.0%
!! GAGAAGGGCATTGTTCTCCT+TGG - tig0018513:228896-228915 None:intergenic 50.0%
GGATTCCGTTTGTCGTATGG+AGG + tig0018513:228937-228956 Msa1367560:CDS 50.0%
GAGCACCTCCATACGACAAA+CGG - tig0018513:228945-228964 None:intergenic 50.0%
! ACTCTGGGGAAGATCATTGG+AGG + tig0018513:228997-229016 Msa1367560:CDS 50.0%
! CTCTGGGGAAGATCATTGGA+GGG + tig0018513:228998-229017 Msa1367560:CDS 50.0%
TCTGGGGAAGATCATTGGAG+GGG + tig0018513:228999-229018 Msa1367560:CDS 50.0%
GGTTTGCCAGTAGGTGCATA+TGG + tig0018513:229021-229040 Msa1367560:CDS 50.0%
TTGCCAGTAGGTGCATATGG+AGG + tig0018513:229024-229043 Msa1367560:CDS 50.0%
CTACCTCCATATGCACCTAC+TGG - tig0018513:229030-229049 None:intergenic 50.0%
CAGTAGGTGCATATGGAGGT+AGG + tig0018513:229028-229047 Msa1367560:CDS 50.0%
TATTATGGAGACCGTGGCTC+CGG + tig0018513:229056-229075 Msa1367560:CDS 50.0%
GACGTTGAGTGGGAATCCTT+TGG + tig0018513:229101-229120 Msa1367560:CDS 50.0%
ATGCCTGCAGTCATTGCCAA+AGG - tig0018513:229120-229139 None:intergenic 50.0%
CTGAAGCGTATTAAGGAGCC+AGG + tig0018513:229147-229166 Msa1367560:CDS 50.0%
GTTGAAGCTGGTAAGAAGGC+AGG + tig0018513:229219-229238 Msa1367560:CDS 50.0%
AAGGCAGGGCATGCAATATG+TGG + tig0018513:229234-229253 Msa1367560:CDS 50.0%
CAGGGCATGCAATATGTGGT+GGG + tig0018513:229238-229257 Msa1367560:CDS 50.0%
! CACCTTCACAGTTTGAGGCT+GGG + tig0018513:229391-229410 Msa1367560:CDS 50.0%
AACCCAGCCTCAAACTGTGA+AGG - tig0018513:229396-229415 None:intergenic 50.0%
CTGCTGCTGAGAAGGTCTTT+AGG + tig0018513:229460-229479 Msa1367560:CDS 50.0%
AGAAGCTTTCGCAGCTGCAA+AGG + tig0018513:228062-228081 Msa1367560:CDS 50.0%
AAGACAAGGTGCACCAAAGC+TGG - tig0018513:228464-228483 None:intergenic 50.0%
CTCTTTGCCGGTATAAGCAC+GGG - tig0018513:228593-228612 None:intergenic 50.0%
AGGGGAATCAGGAAGTCCTA+GGG - tig0018513:228692-228711 None:intergenic 50.0%
TTAGGAACACCAGGGGAATC+AGG - tig0018513:228703-228722 None:intergenic 50.0%
!! TGGCAGCTTTAGGAACACCA+GGG - tig0018513:228711-228730 None:intergenic 50.0%
GGCTGTAAGGGTTTCATTGG+TGG - tig0018513:228731-228750 None:intergenic 50.0%
GTCATTGAAGGGGGCTGTAA+GGG - tig0018513:228743-228762 None:intergenic 50.0%
AGTCATTGAAGGGGGCTGTA+AGG - tig0018513:228744-228763 None:intergenic 50.0%
GTCTTCCTCGAACCTGTTGT+TGG + tig0018513:228814-228833 Msa1367560:CDS 50.0%
!! CTCCTTGGTGATTTTGCGCA+AGG - tig0018513:228881-228900 None:intergenic 50.0%
!! GAGAAGGGCATTGTTCTCCT+TGG - tig0018513:228896-228915 None:intergenic 50.0%
GGATTCCGTTTGTCGTATGG+AGG + tig0018513:228937-228956 Msa1367560:CDS 50.0%
GAGCACCTCCATACGACAAA+CGG - tig0018513:228945-228964 None:intergenic 50.0%
! ACTCTGGGGAAGATCATTGG+AGG + tig0018513:228997-229016 Msa1367560:CDS 50.0%
! CTCTGGGGAAGATCATTGGA+GGG + tig0018513:228998-229017 Msa1367560:CDS 50.0%
TCTGGGGAAGATCATTGGAG+GGG + tig0018513:228999-229018 Msa1367560:CDS 50.0%
GGTTTGCCAGTAGGTGCATA+TGG + tig0018513:229021-229040 Msa1367560:CDS 50.0%
TTGCCAGTAGGTGCATATGG+AGG + tig0018513:229024-229043 Msa1367560:CDS 50.0%
CTACCTCCATATGCACCTAC+TGG - tig0018513:229030-229049 None:intergenic 50.0%
CAGTAGGTGCATATGGAGGT+AGG + tig0018513:229028-229047 Msa1367560:CDS 50.0%
TATTATGGAGACCGTGGCTC+CGG + tig0018513:229056-229075 Msa1367560:CDS 50.0%
GACGTTGAGTGGGAATCCTT+TGG + tig0018513:229101-229120 Msa1367560:CDS 50.0%
ATGCCTGCAGTCATTGCCAA+AGG - tig0018513:229120-229139 None:intergenic 50.0%
CTGAAGCGTATTAAGGAGCC+AGG + tig0018513:229147-229166 Msa1367560:CDS 50.0%
GTTGAAGCTGGTAAGAAGGC+AGG + tig0018513:229219-229238 Msa1367560:CDS 50.0%
AAGGCAGGGCATGCAATATG+TGG + tig0018513:229234-229253 Msa1367560:CDS 50.0%
CAGGGCATGCAATATGTGGT+GGG + tig0018513:229238-229257 Msa1367560:CDS 50.0%
! CACCTTCACAGTTTGAGGCT+GGG + tig0018513:229391-229410 Msa1367560:CDS 50.0%
AACCCAGCCTCAAACTGTGA+AGG - tig0018513:229396-229415 None:intergenic 50.0%
CTGCTGCTGAGAAGGTCTTT+AGG + tig0018513:229460-229479 Msa1367560:CDS 50.0%
! ATGGCTGCTTCGGGTATTGC+AGG + tig0018513:227910-227929 Msa1367560:CDS 55.0%
! TGGCTGCTTCGGGTATTGCA+GGG + tig0018513:227911-227930 Msa1367560:CDS 55.0%
!!! GTTTTTCGGTGCTGGGCTTC+TGG - tig0018513:228023-228042 None:intergenic 55.0%
ACAGGAGAGTTCACACCTCC+AGG - tig0018513:228180-228199 None:intergenic 55.0%
CCACATGCGAGCACCTTTGA+CGG - tig0018513:228247-228266 None:intergenic 55.0%
!! CGTCAAAGGTGCTCGCATGT+GGG + tig0018513:228245-228264 Msa1367560:CDS 55.0%
GCTCGCATGTGGGACATTGA+TGG + tig0018513:228255-228274 Msa1367560:CDS 55.0%
! TTCCGGCACAGAAGCATGCA+TGG + tig0018513:228552-228571 Msa1367560:CDS 55.0%
! TCCGGCACAGAAGCATGCAT+GGG + tig0018513:228553-228572 Msa1367560:CDS 55.0%
ACCCATGCATGCTTCTGTGC+CGG - tig0018513:228557-228576 None:intergenic 55.0%
GGAATCAGGAAGTCCTAGGG+TGG - tig0018513:228689-228708 None:intergenic 55.0%
CAGGGGAATCAGGAAGTCCT+AGG - tig0018513:228693-228712 None:intergenic 55.0%
CTAGGACTTCCTGATTCCCC+TGG + tig0018513:228691-228710 Msa1367560:CDS 55.0%
!! GGCAGCTTTAGGAACACCAG+GGG - tig0018513:228710-228729 None:intergenic 55.0%
!! GTGGCAGCTTTAGGAACACC+AGG - tig0018513:228712-228731 None:intergenic 55.0%
GGGGGCTGTAAGGGTTTCAT+TGG - tig0018513:228734-228753 None:intergenic 55.0%
CTGGGGAAGATCATTGGAGG+GGG + tig0018513:229000-229019 Msa1367560:CDS 55.0%
ATTGGAGGGGGTTTGCCAGT+AGG + tig0018513:229012-229031 Msa1367560:CDS 55.0%
CTGGACCTATGTACCAGGCT+GGG + tig0018513:229079-229098 Msa1367560:CDS 55.0%
AACGTCCCAGCCTGGTACAT+AGG - tig0018513:229087-229106 None:intergenic 55.0%
GCAGGGCATGCAATATGTGG+TGG + tig0018513:229237-229256 Msa1367560:CDS 55.0%
! GCACCTTCACAGTTTGAGGC+TGG + tig0018513:229390-229409 Msa1367560:CDS 55.0%
GACCATTGCTGCTGCTGAGA+AGG + tig0018513:229452-229471 Msa1367560:CDS 55.0%
GACCTTCTCAGCAGCAGCAA+TGG - tig0018513:229457-229476 None:intergenic 55.0%
! ATGGCTGCTTCGGGTATTGC+AGG + tig0018513:227910-227929 Msa1367560:CDS 55.0%
! TGGCTGCTTCGGGTATTGCA+GGG + tig0018513:227911-227930 Msa1367560:CDS 55.0%
!!! GTTTTTCGGTGCTGGGCTTC+TGG - tig0018513:228023-228042 None:intergenic 55.0%
ACAGGAGAGTTCACACCTCC+AGG - tig0018513:228180-228199 None:intergenic 55.0%
CCACATGCGAGCACCTTTGA+CGG - tig0018513:228247-228266 None:intergenic 55.0%
!! CGTCAAAGGTGCTCGCATGT+GGG + tig0018513:228245-228264 Msa1367560:CDS 55.0%
GCTCGCATGTGGGACATTGA+TGG + tig0018513:228255-228274 Msa1367560:CDS 55.0%
! TTCCGGCACAGAAGCATGCA+TGG + tig0018513:228552-228571 Msa1367560:CDS 55.0%
! TCCGGCACAGAAGCATGCAT+GGG + tig0018513:228553-228572 Msa1367560:CDS 55.0%
ACCCATGCATGCTTCTGTGC+CGG - tig0018513:228557-228576 None:intergenic 55.0%
GGAATCAGGAAGTCCTAGGG+TGG - tig0018513:228689-228708 None:intergenic 55.0%
CAGGGGAATCAGGAAGTCCT+AGG - tig0018513:228693-228712 None:intergenic 55.0%
CTAGGACTTCCTGATTCCCC+TGG + tig0018513:228691-228710 Msa1367560:CDS 55.0%
!! GGCAGCTTTAGGAACACCAG+GGG - tig0018513:228710-228729 None:intergenic 55.0%
!! GTGGCAGCTTTAGGAACACC+AGG - tig0018513:228712-228731 None:intergenic 55.0%
GGGGGCTGTAAGGGTTTCAT+TGG - tig0018513:228734-228753 None:intergenic 55.0%
CTGGGGAAGATCATTGGAGG+GGG + tig0018513:229000-229019 Msa1367560:CDS 55.0%
ATTGGAGGGGGTTTGCCAGT+AGG + tig0018513:229012-229031 Msa1367560:CDS 55.0%
CTGGACCTATGTACCAGGCT+GGG + tig0018513:229079-229098 Msa1367560:CDS 55.0%
AACGTCCCAGCCTGGTACAT+AGG - tig0018513:229087-229106 None:intergenic 55.0%
GCAGGGCATGCAATATGTGG+TGG + tig0018513:229237-229256 Msa1367560:CDS 55.0%
! GCACCTTCACAGTTTGAGGC+TGG + tig0018513:229390-229409 Msa1367560:CDS 55.0%
GACCATTGCTGCTGCTGAGA+AGG + tig0018513:229452-229471 Msa1367560:CDS 55.0%
GACCTTCTCAGCAGCAGCAA+TGG - tig0018513:229457-229476 None:intergenic 55.0%
!! TTCGGTGCTGGGCTTCTGGT+CGG - tig0018513:228019-228038 None:intergenic 60.0%
!! CCGTCAAAGGTGCTCGCATG+TGG + tig0018513:228244-228263 Msa1367560:CDS 60.0%
CGGTATAAGCACGGGCAAGG+CGG - tig0018513:228585-228604 None:intergenic 60.0%
CGCCTTGCCCGTGCTTATAC+CGG + tig0018513:228583-228602 Msa1367560:CDS 60.0%
TGCCGGTATAAGCACGGGCA+AGG - tig0018513:228588-228607 None:intergenic 60.0%
!! GGTAGTGGAGTTGCCACCCT+AGG + tig0018513:228673-228692 Msa1367560:CDS 60.0%
TCCGGCTGGACCTATGTACC+AGG + tig0018513:229074-229093 Msa1367560:CDS 60.0%
GCCTGGTACATAGGTCCAGC+CGG - tig0018513:229078-229097 None:intergenic 60.0%
GCTGGACCTATGTACCAGGC+TGG + tig0018513:229078-229097 Msa1367560:CDS 60.0%
TACCAGGCTGGGACGTTGAG+TGG + tig0018513:229090-229109 Msa1367560:CDS 60.0%
ACCAGGCTGGGACGTTGAGT+GGG + tig0018513:229091-229110 Msa1367560:CDS 60.0%
TGAGGCTGGGTTCACCAGCT+TGG + tig0018513:229404-229423 Msa1367560:CDS 60.0%
!! TTCGGTGCTGGGCTTCTGGT+CGG - tig0018513:228019-228038 None:intergenic 60.0%
!! CCGTCAAAGGTGCTCGCATG+TGG + tig0018513:228244-228263 Msa1367560:CDS 60.0%
CGGTATAAGCACGGGCAAGG+CGG - tig0018513:228585-228604 None:intergenic 60.0%
CGCCTTGCCCGTGCTTATAC+CGG + tig0018513:228583-228602 Msa1367560:CDS 60.0%
TGCCGGTATAAGCACGGGCA+AGG - tig0018513:228588-228607 None:intergenic 60.0%
!! GGTAGTGGAGTTGCCACCCT+AGG + tig0018513:228673-228692 Msa1367560:CDS 60.0%
TCCGGCTGGACCTATGTACC+AGG + tig0018513:229074-229093 Msa1367560:CDS 60.0%
GCCTGGTACATAGGTCCAGC+CGG - tig0018513:229078-229097 None:intergenic 60.0%
GCTGGACCTATGTACCAGGC+TGG + tig0018513:229078-229097 Msa1367560:CDS 60.0%
TACCAGGCTGGGACGTTGAG+TGG + tig0018513:229090-229109 Msa1367560:CDS 60.0%
ACCAGGCTGGGACGTTGAGT+GGG + tig0018513:229091-229110 Msa1367560:CDS 60.0%
TGAGGCTGGGTTCACCAGCT+TGG + tig0018513:229404-229423 Msa1367560:CDS 60.0%
CATAGGTCCAGCCGGAGCCA+CGG - tig0018513:229070-229089 None:intergenic 65.0%
TCCCACTCAACGTCCCAGCC+TGG - tig0018513:229095-229114 None:intergenic 65.0%
CATAGGTCCAGCCGGAGCCA+CGG - tig0018513:229070-229089 None:intergenic 65.0%
TCCCACTCAACGTCCCAGCC+TGG - tig0018513:229095-229114 None:intergenic 65.0%
! GGTGCTGGGCTTCTGGTCGG+TGG - tig0018513:228016-228035 None:intergenic 70.0%
ATGGAGACCGTGGCTCCGGC+TGG + tig0018513:229060-229079 Msa1367560:CDS 70.0%
! GGTGCTGGGCTTCTGGTCGG+TGG - tig0018513:228016-228035 None:intergenic 70.0%
ATGGAGACCGTGGCTCCGGC+TGG + tig0018513:229060-229079 Msa1367560:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0018513 gene 227838 229730 227838 ID=Msa1367560;Name=Msa1367560
tig0018513 mRNA 227838 229730 227838 ID=Msa1367560-mRNA-1;Parent=Msa1367560;Name=Msa1367560-mRNA-1;_AED=0.02;_eAED=0.02;_QI=72|1|1|1|1|1|3|239|471
tig0018513 exon 227838 228083 227838 ID=Msa1367560-mRNA-1:exon:15535;Parent=Msa1367560-mRNA-1
tig0018513 exon 228168 228341 228168 ID=Msa1367560-mRNA-1:exon:15536;Parent=Msa1367560-mRNA-1
tig0018513 exon 228424 229730 228424 ID=Msa1367560-mRNA-1:exon:15537;Parent=Msa1367560-mRNA-1
tig0018513 five_prime_UTR 227838 227909 227838 ID=Msa1367560-mRNA-1:five_prime_utr;Parent=Msa1367560-mRNA-1
tig0018513 CDS 227910 228083 227910 ID=Msa1367560-mRNA-1:cds;Parent=Msa1367560-mRNA-1
tig0018513 CDS 228168 228341 228168 ID=Msa1367560-mRNA-1:cds;Parent=Msa1367560-mRNA-1
tig0018513 CDS 228424 229491 228424 ID=Msa1367560-mRNA-1:cds;Parent=Msa1367560-mRNA-1
tig0018513 three_prime_UTR 229492 229730 229492 ID=Msa1367560-mRNA-1:three_prime_utr;Parent=Msa1367560-mRNA-1
Gene Sequence

>Msa1367560

ATGGCTGCTTCGGGTATTGCAGGGATTACCCTTCTCAATTGCTTCTCTTCTTCTTCTTCTTCATCAGCGAGATGCCGAACTCGTTCTTTGACTATGGCTGTTTCCACCGACCAGAAGCCCAGCACCGAAAAACTCACTCTTCGCAAATCTGAAGAAGCTTTCGCAGCTGCAAAGGAATTGATGCCTGGAGGTGTGAACTCTCCTGTTCGTGCTTTCAAATCAGTTGGTGGACAACCAATTATCATTGATTCCGTCAAAGGTGCTCGCATGTGGGACATTGATGGCAACCAATACATTGACTATGTTGGTTCTTGGGGTCCTGCAATTATTGGTCACGCTGATGATCAGGTACTCTCCGCTCTTGCTGAGACAATGAAGAAAGGAACCAGCTTTGGTGCACCTTGTCTTCTTGAAAACACTCTAGCTGAGATGGTTATCTCTGCTGTTCCCAGCATTGAAATGGTCAGATTTGTCAATTCCGGCACAGAAGCATGCATGGGTGCACTCCGCCTTGCCCGTGCTTATACCGGCAAAGAGAAGATCATCAAGTTTGAGGGATGTTATCACGGCCATGCTGATCCTTTTCTTGTTAAGGCAGGTAGTGGAGTTGCCACCCTAGGACTTCCTGATTCCCCTGGTGTTCCTAAAGCTGCCACCAATGAAACCCTTACAGCCCCCTTCAATGACTTTGCTGCTGTTGAGAAGATCTTTGAAGCCAACAAAGGAGAGATAGCCGTAGTCTTCCTCGAACCTGTTGTTGGAAATTCCGGTTTCATTACTCCTAAACCTGATTTTCTTAGTTCCTTGCGCAAAATCACCAAGGAGAACAATGCCCTTCTCGTGTTTGATGAAGTTATGACTGGATTCCGTTTGTCGTATGGAGGTGCTCAACAATACTTTGGCATAACTCCTGATATAACAACTCTGGGGAAGATCATTGGAGGGGGTTTGCCAGTAGGTGCATATGGAGGTAGGAGAGATATTATGGAGACCGTGGCTCCGGCTGGACCTATGTACCAGGCTGGGACGTTGAGTGGGAATCCTTTGGCAATGACTGCAGGCATAGAAACTCTGAAGCGTATTAAGGAGCCAGGAACTTATGAATACTTGGACAAAATTACAGGTGAGCTTGTTCAAGGCATTGTTGAAGCTGGTAAGAAGGCAGGGCATGCAATATGTGGTGGGCATATAAATGGGATGTTTGGGTTTTTCTTCACAGAAGGACCTGTGTACAATTTCACAGATGCAAAAAAGAGTGACACTGCCAAGTTTGCTAAGTTCTTCTGGGGTATGTTAGCAGAAGGTGTCTATTTGGCACCTTCACAGTTTGAGGCTGGGTTCACCAGCTTGGCACATACTTCTGATGACATCAAGAAGACCATTGCTGCTGCTGAGAAGGTCTTTAGGGAGATCTGA
Protein sequence

>Msa1367560

MAASGIAGITLLNCFSSSSSSSARCRTRSLTMAVSTDQKPSTEKLTLRKSEEAFAAAKELMPGGVNSPVRAFKSVGGQPIIIDSVKGARMWDIDGNQYIDYVGSWGPAIIGHADDQVLSALAETMKKGTSFGAPCLLENTLAEMVISAVPSIEMVRFVNSGTEACMGALRLARAYTGKEKIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKAATNETLTAPFNDFAAVEKIFEANKGEIAVVFLEPVVGNSGFITPKPDFLSSLRKITKENNALLVFDEVMTGFRLSYGGAQQYFGITPDITTLGKIIGGGLPVGAYGGRRDIMETVAPAGPMYQAGTLSGNPLAMTAGIETLKRIKEPGTYEYLDKITGELVQGIVEAGKKAGHAICGGHINGMFGFFFTEGPVYNFTDAKKSDTAKFAKFFWGMLAEGVYLAPSQFEAGFTSLAHTSDDIKKTIAAAEKVFREI*