Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036350 | Msa0130500 | 0.828670 | 7.903182e-55 | -8.615850e-47 |
| Msa0036350 | Msa0145430 | 0.802543 | 5.338100e-49 | -8.615850e-47 |
| Msa0036350 | Msa0176370 | 0.873174 | 1.804214e-67 | -8.615850e-47 |
| Msa0036350 | Msa0242720 | 0.821690 | 3.531460e-53 | -8.615850e-47 |
| Msa0036350 | Msa0264580 | -0.801879 | 7.311353e-49 | -8.615850e-47 |
| Msa0036350 | Msa0281000 | 0.802770 | 4.792416e-49 | -8.615850e-47 |
| Msa0036350 | Msa0294200 | 0.828815 | 7.287382e-55 | -8.615850e-47 |
| Msa0036350 | Msa0339970 | -0.801755 | 7.752988e-49 | -8.615850e-47 |
| Msa0036350 | Msa0393910 | 0.803857 | 2.853566e-49 | -8.615850e-47 |
| Msa0036350 | Msa0497860 | 0.808192 | 3.495198e-50 | -8.615850e-47 |
| Msa0036350 | Msa0559440 | -0.817111 | 3.905583e-52 | -8.615850e-47 |
| Msa0036350 | Msa0568780 | -0.815088 | 1.105762e-51 | -8.615850e-47 |
| Msa0036350 | Msa0590620 | -0.805708 | 1.171498e-49 | -8.615850e-47 |
| Msa0036350 | Msa0611060 | 0.802802 | 4.720121e-49 | -8.615850e-47 |
| Msa0036350 | Msa0654400 | -0.824224 | 9.064023e-54 | -8.615850e-47 |
| Msa0036350 | Msa0654500 | -0.812237 | 4.691219e-51 | -8.615850e-47 |
| Msa0036350 | Msa0956600 | -0.826813 | 2.207784e-54 | -8.615850e-47 |
| Msa0036350 | Msa0971780 | -0.800236 | 1.584432e-48 | -8.615850e-47 |
| Msa0036350 | Msa1027400 | 0.801439 | 8.999346e-49 | -8.615850e-47 |
| Msa0036350 | Msa1075090 | 0.800641 | 1.309953e-48 | -8.615850e-47 |
| Msa0036350 | Msa1077970 | 0.852140 | 5.610563e-61 | -8.615850e-47 |
| Msa0036350 | Msa1154570 | 0.804580 | 2.018273e-49 | -8.615850e-47 |
| Msa0036350 | Msa1386180 | -0.800443 | 1.437595e-48 | -8.615850e-47 |
| Msa0036350 | Msa1459920 | 0.802962 | 4.373888e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0036350 | MtrunA17_Chr1g0198781 | 98.715 | 467 | 6 | 0 | 1 | 467 | 1 | 467 | 0.0 | 952 |
| Msa0036350 | MtrunA17_Chr4g0062731 | 66.667 | 468 | 145 | 4 | 8 | 467 | 1 | 465 | 0.0 | 637 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0036350 | AT1G68820.1 | 72.863 | 468 | 126 | 1 | 1 | 467 | 1 | 468 | 0.0 | 715 |
| Msa0036350 | AT1G68820.4 | 71.941 | 474 | 126 | 2 | 1 | 467 | 1 | 474 | 0.0 | 710 |
| Msa0036350 | AT1G68820.3 | 73.397 | 421 | 111 | 1 | 48 | 467 | 11 | 431 | 0.0 | 653 |
| Msa0036350 | AT1G73950.1 | 67.457 | 464 | 141 | 4 | 12 | 467 | 5 | 466 | 0.0 | 652 |
| Msa0036350 | AT1G68820.2 | 72.365 | 427 | 111 | 2 | 48 | 467 | 11 | 437 | 0.0 | 648 |
| Msa0036350 | AT1G18470.1 | 66.453 | 468 | 148 | 3 | 8 | 467 | 1 | 467 | 0.0 | 648 |
| Msa0036350 | AT1G73950.2 | 64.103 | 468 | 130 | 4 | 8 | 467 | 1 | 438 | 0.0 | 610 |
| Msa0036350 | AT1G18470.2 | 65.385 | 390 | 126 | 3 | 8 | 389 | 1 | 389 | 0.0 | 518 |
Find 121 sgRNAs with CRISPR-Local
Find 425 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAGCAATGCACAGTTTA+AGG | 0.145323 | 1_1:+64802767 | None:intergenic |
| TGGGACTTGTTTATTAACTA+TGG | 0.220890 | 1_1:-64804780 | Msa0036350:CDS |
| GCGCAAAAGATATACCAATT+TGG | 0.258604 | 1_1:-64804300 | Msa0036350:CDS |
| AGAGAAAATAAAAGCAATAT+TGG | 0.287155 | 1_1:-64809412 | Msa0036350:five_prime_UTR |
| TGCAGGTGATGTTGCTGCCC+TGG | 0.304003 | 1_1:-64804808 | Msa0036350:intron |
| TAGTGTAATTAATGTTTAAC+TGG | 0.307688 | 1_1:-64802420 | Msa0036350:three_prime_UTR |
| GATATAGATGAGTAGCTTCT+AGG | 0.308903 | 1_1:+64804175 | None:intergenic |
| GCAAAGAACGTGATGCTTGC+AGG | 0.316868 | 1_1:+64803147 | None:intergenic |
| CAAAATCCCGTGATTGCTTT+GGG | 0.323198 | 1_1:-64804150 | Msa0036350:CDS |
| CGCAAAAGATATACCAATTT+GGG | 0.323558 | 1_1:-64804299 | Msa0036350:CDS |
| GCAAGCATCACGTTCTTTGC+AGG | 0.327082 | 1_1:-64803144 | Msa0036350:intron |
| GCTTACCACATATCTTTAGA+AGG | 0.334804 | 1_1:+64805486 | None:intergenic |
| CTTCTTCTGTTGCAAGGAGC+TGG | 0.335527 | 1_1:-64804262 | Msa0036350:CDS |
| TCAAAATCCCGTGATTGCTT+TGG | 0.340689 | 1_1:-64804151 | Msa0036350:CDS |
| TGACCGTTTCCATGAATTGT+AGG | 0.347931 | 1_1:+64804620 | None:intergenic |
| ACTCCATTCTAGATATCTTA+TGG | 0.350126 | 1_1:+64804568 | None:intergenic |
| CTTCTTCTATGTATACATCT+TGG | 0.363964 | 1_1:-64807384 | Msa0036350:CDS |
| AGGAAACTTTGTTGAATGTT+TGG | 0.367014 | 1_1:-64802559 | Msa0036350:three_prime_UTR |
| GTGATGTTGCTGCCCTGGGC+TGG | 0.375144 | 1_1:-64804803 | Msa0036350:CDS |
| AAGTTTCCTTTGACTATCAT+AGG | 0.376479 | 1_1:+64802573 | None:intergenic |
| TCGATTGTCCCACGGCAGAT+AGG | 0.378930 | 1_1:+64802977 | None:intergenic |
| AGTCATAGCTACACCATTAC+TGG | 0.380264 | 1_1:-64807418 | Msa0036350:CDS |
| CTCTTGGCAGGTTGCTAGGT+TGG | 0.384100 | 1_1:-64803982 | Msa0036350:intron |
| CCTCCTCTTGGCAGGTTGCT+AGG | 0.384372 | 1_1:-64803986 | Msa0036350:intron |
| AAGAAGAGTGTGCGTGACTT+TGG | 0.386233 | 1_1:+64809373 | None:intergenic |
| CCTGCTCCTTCGATGCCTCA+TGG | 0.387713 | 1_1:-64807565 | Msa0036350:CDS |
| TGGCACAATCCTACAATTCA+TGG | 0.391098 | 1_1:-64804629 | Msa0036350:CDS |
| ATATGACAGATGAAGCAGTA+TGG | 0.394755 | 1_1:-64806367 | Msa0036350:CDS |
| TGCAGCAATGCACAGTTTAA+GGG | 0.396105 | 1_1:+64802768 | None:intergenic |
| TTCTTCTATGTATACATCTT+GGG | 0.402849 | 1_1:-64807383 | Msa0036350:CDS |
| GCAGGTGATGTTGCTGCCCT+GGG | 0.413418 | 1_1:-64804807 | Msa0036350:intron |
| ATGTTGCTGCCCTGGGCTGG+TGG | 0.415523 | 1_1:-64804800 | Msa0036350:CDS |
| CAGCTCCTTGCAACAGAAGA+AGG | 0.417091 | 1_1:+64804263 | None:intergenic |
| AAATTTCAGGGAACACCATC+GGG | 0.437322 | 1_1:-64804322 | Msa0036350:intron |
| TCTCCCCTTCTTCTGTTGCA+AGG | 0.441729 | 1_1:-64804268 | Msa0036350:CDS |
| AATGCTACCATGCGCAGTTA+AGG | 0.443239 | 1_1:-64802658 | Msa0036350:three_prime_UTR |
| CGATTGTCCCACGGCAGATA+GGG | 0.448802 | 1_1:+64802978 | None:intergenic |
| TCAGTCTACACATCATATAT+AGG | 0.450844 | 1_1:+64802944 | None:intergenic |
| CTGCTCCTTCGATGCCTCAT+GGG | 0.451611 | 1_1:-64807564 | Msa0036350:CDS |
| ATGTGTAGGGCTTTGATGCC+TGG | 0.452224 | 1_1:-64806401 | Msa0036350:CDS |
| CCATGAGGCATCGAAGGAGC+AGG | 0.459822 | 1_1:+64807565 | None:intergenic |
| ATACATCTTGGGAGCAGTTA+TGG | 0.460031 | 1_1:-64807372 | Msa0036350:intron |
| GGGACTTGTTTATTAACTAT+GGG | 0.474665 | 1_1:-64804779 | Msa0036350:intron |
| TAAACAAGTCCCACCAGCCC+AGG | 0.475470 | 1_1:+64804790 | None:intergenic |
| GAAGAGTAATGAGTTGGAGA+AGG | 0.480625 | 1_1:-64809209 | Msa0036350:CDS |
| ATACCATAAGATATCTAGAA+TGG | 0.482455 | 1_1:-64804571 | Msa0036350:CDS |
| TGTTGCTGCCCTGGGCTGGT+GGG | 0.485436 | 1_1:-64804799 | Msa0036350:CDS |
| TGGAGACTTCAAGCTGCACT+TGG | 0.490047 | 1_1:-64803536 | Msa0036350:CDS |
| AGCTCAAATGCCACCAGTAA+TGG | 0.490887 | 1_1:+64807405 | None:intergenic |
| GACTGAAGAGAGAGAAAGGT+TGG | 0.491854 | 1_1:+64809271 | None:intergenic |
| TTGGCAGGTTGCTAGGTTGG+TGG | 0.493004 | 1_1:-64803979 | Msa0036350:intron |
| TGTATCTTTATAGGATGTGT+AGG | 0.493067 | 1_1:-64806415 | Msa0036350:intron |
| GGCGTAAAACAGAAGACAAA+AGG | 0.494350 | 1_1:-64809437 | Msa0036350:five_prime_UTR |
| TGCAGTCTGCAGGATATTGG+CGG | 0.496698 | 1_1:-64804494 | Msa0036350:CDS |
| AAACTTACCACCATGAGAAA+AGG | 0.497898 | 1_1:+64809100 | None:intergenic |
| CAGAGACTGAAGAGAGAGAA+AGG | 0.498351 | 1_1:+64809267 | None:intergenic |
| GAACGTGATGCTTGCAGGGA+AGG | 0.500638 | 1_1:+64803152 | None:intergenic |
| AATGCACAGTTTAAGGGAGG+TGG | 0.501325 | 1_1:+64802774 | None:intergenic |
| ATGTTGTGATAGCACGAGGC+AGG | 0.506024 | 1_1:-64807597 | Msa0036350:CDS |
| AAGAGTAATGAGTTGGAGAA+GGG | 0.507658 | 1_1:-64809208 | Msa0036350:CDS |
| TAAATTTCAGGGAACACCAT+CGG | 0.510830 | 1_1:-64804323 | Msa0036350:intron |
| AGTATTTGGAAAGCAATGAA+TGG | 0.512298 | 1_1:+64804455 | None:intergenic |
| CTTTGTTGAATGTTTGGTTG+AGG | 0.512800 | 1_1:-64802553 | Msa0036350:three_prime_UTR |
| TGTTGAAGTCTATATGAACT+AGG | 0.513809 | 1_1:-64802681 | Msa0036350:three_prime_UTR |
| AGTGTGCGTGACTTTGGAAC+AGG | 0.517007 | 1_1:+64809379 | None:intergenic |
| CGTTTCTCGTTTGTACGAAG+TGG | 0.520515 | 1_1:-64804649 | Msa0036350:CDS |
| CTTCTGGATTTCAATATCCA+TGG | 0.527664 | 1_1:-64805537 | Msa0036350:CDS |
| ATGCACAGTTTAAGGGAGGT+GGG | 0.529734 | 1_1:+64802775 | None:intergenic |
| CAGTGAAGAAAATGCCTAGA+GGG | 0.530565 | 1_1:-64803735 | Msa0036350:CDS |
| ACCATGAGAAAAGGAAGAAA+CGG | 0.533548 | 1_1:+64809109 | None:intergenic |
| TATGACAGATGAAGCAGTAT+GGG | 0.534167 | 1_1:-64806366 | Msa0036350:CDS |
| AACGGTCAAGCTTGAGAACA+AGG | 0.536993 | 1_1:+64809127 | None:intergenic |
| GGCTTTGATGCCTGGAGATG+AGG | 0.541183 | 1_1:-64806393 | Msa0036350:CDS |
| TATCTAGAATGGAGTAGAGA+AGG | 0.544891 | 1_1:-64804560 | Msa0036350:CDS |
| TTCGAAGAAGAGTAATGAGT+TGG | 0.546671 | 1_1:-64809215 | Msa0036350:CDS |
| CAAAGAACGTGATGCTTGCA+GGG | 0.547285 | 1_1:+64803148 | None:intergenic |
| AGCTCCTTGCAACAGAAGAA+GGG | 0.551454 | 1_1:+64804264 | None:intergenic |
| GCCTAGAGGGGAACTTGTTG+AGG | 0.557281 | 1_1:-64803722 | Msa0036350:CDS |
| TGGCGCCCATGAGGCATCGA+AGG | 0.558574 | 1_1:+64807559 | None:intergenic |
| TAAATACCTATGATAGTCAA+AGG | 0.560157 | 1_1:-64802579 | Msa0036350:three_prime_UTR |
| TGCACAGTTTAAGGGAGGTG+GGG | 0.563118 | 1_1:+64802776 | None:intergenic |
| GTATCTTTATAGGATGTGTA+GGG | 0.565095 | 1_1:-64806414 | Msa0036350:intron |
| CTTACCACATATCTTTAGAA+GGG | 0.565443 | 1_1:+64805487 | None:intergenic |
| TCCTCAACAAGTTCCCCTCT+AGG | 0.570816 | 1_1:+64803721 | None:intergenic |
| AGGCATCGAAGGAGCAGGCA+AGG | 0.572051 | 1_1:+64807570 | None:intergenic |
| TATTATCTCACAATGGCTTG+TGG | 0.576710 | 1_1:-64802900 | Msa0036350:three_prime_UTR |
| CGTGATGCTTGCAGGGAAGG+AGG | 0.577724 | 1_1:+64803155 | None:intergenic |
| TATGAATCCTTAACTGCGCA+TGG | 0.578759 | 1_1:+64802651 | None:intergenic |
| AATCCTACAATTCATGGAAA+CGG | 0.579082 | 1_1:-64804623 | Msa0036350:CDS |
| TCACTTAATGCTGTTTGATG+TGG | 0.581126 | 1_1:-64802494 | Msa0036350:three_prime_UTR |
| AGAAGTTACAAAATACAGCC+AGG | 0.582877 | 1_1:-64803504 | Msa0036350:CDS |
| TCCGTTCTTCGATTGTCCCA+CGG | 0.584122 | 1_1:+64802969 | None:intergenic |
| TTCAGTCTCTGCGATTTCTG+CGG | 0.586409 | 1_1:-64809255 | Msa0036350:five_prime_UTR |
| TTCACCCTTCTAAAGATATG+TGG | 0.589957 | 1_1:-64805491 | Msa0036350:intron |
| GCCGTGGGACAATCGAAGAA+CGG | 0.593080 | 1_1:-64802970 | Msa0036350:CDS |
| AAGAAGTGCCCTATCTGCCG+TGG | 0.599671 | 1_1:-64802986 | Msa0036350:CDS |
| AATAGACGAAGGAAGTAGAG+AGG | 0.600543 | 1_1:-64803954 | Msa0036350:CDS |
| ATGGTATTTGACGACGAACA+TGG | 0.601503 | 1_1:+64804587 | None:intergenic |
| TGTCTTACTTGGCGCCCATG+AGG | 0.603836 | 1_1:+64807550 | None:intergenic |
| CTTTGAAGAGCAGATTAATG+TGG | 0.604053 | 1_1:-64803179 | Msa0036350:CDS |
| GAGAACAAGGAGAAGAGAGA+AGG | 0.607762 | 1_1:+64809140 | None:intergenic |
| AAACAAGTCCCACCAGCCCA+GGG | 0.610460 | 1_1:+64804791 | None:intergenic |
| TAGAGGGGAACTTGTTGAGG+AGG | 0.612556 | 1_1:-64803719 | Msa0036350:intron |
| GCTCCTTGCAACAGAAGAAG+GGG | 0.614147 | 1_1:+64804265 | None:intergenic |
| ATCAATTCAAAAGCGATGAG+AGG | 0.615437 | 1_1:+64807205 | None:intergenic |
| GTTCTTCTTCGCAACCTCCG+AGG | 0.629527 | 1_1:-64809346 | Msa0036350:five_prime_UTR |
| AGAAGTGCCCTATCTGCCGT+GGG | 0.634893 | 1_1:-64802985 | Msa0036350:CDS |
| AAACACGCGTATCTATGAAG+AGG | 0.635408 | 1_1:+64809310 | None:intergenic |
| GCAGATACATTAATCACACT+TGG | 0.637461 | 1_1:+64802859 | None:intergenic |
| AGCAATGCACAGTTTAAGGG+AGG | 0.659991 | 1_1:+64802771 | None:intergenic |
| AGTGAAGAAAATGCCTAGAG+GGG | 0.666791 | 1_1:-64803734 | Msa0036350:CDS |
| TTTCATGTTGTGATAGCACG+AGG | 0.668280 | 1_1:-64807601 | Msa0036350:CDS |
| GGCAGCAACAAAGAAGACCA+TGG | 0.675195 | 1_1:+64805520 | None:intergenic |
| CATAGCTACACCATTACTGG+TGG | 0.678507 | 1_1:-64807415 | Msa0036350:CDS |
| GGTTGGTGGTCAATAGACGA+AGG | 0.703854 | 1_1:-64803965 | Msa0036350:CDS |
| ACAGTGAAGAAAATGCCTAG+AGG | 0.720684 | 1_1:-64803736 | Msa0036350:CDS |
| CTTTAGAAGGGTGAACACTG+TGG | 0.725837 | 1_1:+64805499 | None:intergenic |
| GATTCATATCGCTGTCACTG+AGG | 0.737002 | 1_1:-64802636 | Msa0036350:three_prime_UTR |
| AGTTACAAAATACAGCCAGG+AGG | 0.745954 | 1_1:-64803501 | Msa0036350:CDS |
| ATATACGTATTATCTCACAA+TGG | 0.752173 | 1_1:-64802907 | Msa0036350:three_prime_UTR |
| GTAGCTATGACTGAATGACA+AGG | 0.785500 | 1_1:+64807429 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAGAAATAAAAAAAAAATAT+TGG | - | chr1_1:64802417-64802436 | Msa0036350:three_prime_UTR | 10.0% |
| !!! | ATAAAAAAAAAATATTGGTT+TGG | - | chr1_1:64802422-64802441 | Msa0036350:three_prime_UTR | 10.0% |
| !! | TATGAATATGATAATTCAAA+AGG | + | chr1_1:64802870-64802889 | None:intergenic | 15.0% |
| !!! | TTGTTAGATTAATTTTTGTT+TGG | - | chr1_1:64803086-64803105 | Msa0036350:intron | 15.0% |
| !!! | ATTAATTTTTGTTTGGAATA+GGG | - | chr1_1:64803093-64803112 | Msa0036350:intron | 15.0% |
| !!! | CTAATATGTTTTTTTATAAC+CGG | - | chr1_1:64803810-64803829 | Msa0036350:intron | 15.0% |
| !! | ATAAAATAAAAAGAAACTGT+TGG | - | chr1_1:64803938-64803957 | Msa0036350:CDS | 15.0% |
| !! | TAAAATAAAAAGAAACTGTT+GGG | - | chr1_1:64803939-64803958 | Msa0036350:CDS | 15.0% |
| !!! | TTTAGTACTATTTTGATTTT+TGG | - | chr1_1:64806142-64806161 | Msa0036350:intron | 15.0% |
| !! | GTTATGATTGAAATTTAATT+AGG | + | chr1_1:64806886-64806905 | None:intergenic | 15.0% |
| !! | AGAAAAACAAATTTATCTTT+AGG | - | chr1_1:64807796-64807815 | Msa0036350:intron | 15.0% |
| !! | AGAGAAAATAAAAGCAATAT+TGG | - | chr1_1:64802468-64802487 | Msa0036350:three_prime_UTR | 20.0% |
| !!! | GATTAATTTTTGTTTGGAAT+AGG | - | chr1_1:64803092-64803111 | Msa0036350:intron | 20.0% |
| !! | TGTAATAAGATCTATAGATA+CGG | - | chr1_1:64803268-64803287 | Msa0036350:intron | 20.0% |
| !!! | TGATATAATGAACTTTGAAA+GGG | + | chr1_1:64804211-64804230 | None:intergenic | 20.0% |
| !! | ATGATATAATGAACTTTGAA+AGG | + | chr1_1:64804212-64804231 | None:intergenic | 20.0% |
| !!! | TATCATAGAATTTGAGATTA+GGG | + | chr1_1:64805134-64805153 | None:intergenic | 20.0% |
| !!! | TTATCATAGAATTTGAGATT+AGG | + | chr1_1:64805135-64805154 | None:intergenic | 20.0% |
| !! | TTCTATGATAAACTTTCAAT+AGG | - | chr1_1:64805144-64805163 | Msa0036350:intron | 20.0% |
| !! | GACAAAAAATGTATCTTTAT+AGG | - | chr1_1:64805456-64805475 | Msa0036350:intron | 20.0% |
| !!! | TTTATAATACTCTGTTTTGA+TGG | - | chr1_1:64805672-64805691 | Msa0036350:intron | 20.0% |
| !!! | ATTTTTTTTCAAAACCAAAC+AGG | + | chr1_1:64805859-64805878 | None:intergenic | 20.0% |
| !!! | ATGTGTTCTTATTTTAACTT+TGG | - | chr1_1:64805927-64805946 | Msa0036350:intron | 20.0% |
| !! | AATCAAAATAGTACTAAAGA+AGG | + | chr1_1:64806140-64806159 | None:intergenic | 20.0% |
| !! | AATTATTAAGATGTCACAAA+TGG | + | chr1_1:64806190-64806209 | None:intergenic | 20.0% |
| !! | ATTTGTGACATCTTAATAAT+TGG | - | chr1_1:64806189-64806208 | Msa0036350:intron | 20.0% |
| !! | AAATACTTGAAAATTTGTCT+TGG | + | chr1_1:64806239-64806258 | None:intergenic | 20.0% |
| !! | AATAAATACGAAGTTTATCA+AGG | + | chr1_1:64806631-64806650 | None:intergenic | 20.0% |
| !!! | TATGAAACTTAGATTTTGAT+TGG | - | chr1_1:64806663-64806682 | Msa0036350:intron | 20.0% |
| !!! | ATGAAACTTAGATTTTGATT+GGG | - | chr1_1:64806664-64806683 | Msa0036350:intron | 20.0% |
| !! | TAATAATGATTGCAAAAGAT+GGG | - | chr1_1:64806697-64806716 | Msa0036350:intron | 20.0% |
| !! | AATGAATCATATCAAAGTAA+CGG | + | chr1_1:64806959-64806978 | None:intergenic | 20.0% |
| !! | AATGCATAAAAAGTAGTATT+TGG | + | chr1_1:64807442-64807461 | None:intergenic | 20.0% |
| !! | AAATTTAAACAACCAAAATG+AGG | + | chr1_1:64807544-64807563 | None:intergenic | 20.0% |
| !!! | ATTTTGGTTGTTTAAATTTC+AGG | - | chr1_1:64807545-64807564 | Msa0036350:intron | 20.0% |
| !!! | TTTTGGTTGTTTAAATTTCA+GGG | - | chr1_1:64807546-64807565 | Msa0036350:intron | 20.0% |
| !!! | ATACCATTTTTAGTATAATG+AGG | - | chr1_1:64808004-64808023 | Msa0036350:intron | 20.0% |
| !! | TATCCTCATTATACTAAAAA+TGG | + | chr1_1:64808010-64808029 | None:intergenic | 20.0% |
| !!! | TGCGATTTGATTTATTATTT+AGG | - | chr1_1:64808100-64808119 | Msa0036350:intron | 20.0% |
| !! | CTATTAAGTAAGAAATAACA+TGG | + | chr1_1:64808224-64808243 | None:intergenic | 20.0% |
| !!! | AGTTTAACTTATTCTTAATG+AGG | + | chr1_1:64808250-64808269 | None:intergenic | 20.0% |
| !! | AATTGATCACTAAATATATC+AGG | - | chr1_1:64808656-64808675 | Msa0036350:intron | 20.0% |
| !! | TAGTGTAATTAATGTTTAAC+TGG | - | chr1_1:64809460-64809479 | Msa0036350:five_prime_UTR | 20.0% |
| !!! | GTTTCTAGATTTTTGATCAA+GGG | + | chr1_1:64802820-64802839 | None:intergenic | 25.0% |
| ! | CTTGATCAAAAATCTAGAAA+CGG | - | chr1_1:64802819-64802838 | Msa0036350:three_prime_UTR | 25.0% |
| !!! | AAAATCTAGAAACGGATTAA+AGG | - | chr1_1:64802827-64802846 | Msa0036350:three_prime_UTR | 25.0% |
| !!! | AAATCTAGAAACGGATTAAA+GGG | - | chr1_1:64802828-64802847 | Msa0036350:three_prime_UTR | 25.0% |
| !!! | AATTTTGAAGAAAATGATGC+TGG | - | chr1_1:64803001-64803020 | Msa0036350:CDS | 25.0% |
| !!! | ATTTTGAAGAAAATGATGCT+GGG | - | chr1_1:64803002-64803021 | Msa0036350:CDS | 25.0% |
| !! | AATTTGTTTGATTAGGGAAT+GGG | - | chr1_1:64803183-64803202 | Msa0036350:CDS | 25.0% |
| ! | GTAATAAGATCTATAGATAC+GGG | - | chr1_1:64803269-64803288 | Msa0036350:intron | 25.0% |
| ! | TAATAAGATCTATAGATACG+GGG | - | chr1_1:64803270-64803289 | Msa0036350:intron | 25.0% |
| ! | CTTACAATCTAAACACAAAT+TGG | + | chr1_1:64803787-64803806 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTATAACCGGATT+TGG | - | chr1_1:64803816-64803835 | Msa0036350:intron | 25.0% |
| ! | AAATTGAGATGTATCAGTAT+GGG | - | chr1_1:64803980-64803999 | Msa0036350:intron | 25.0% |
| !! | ATTTAAGACATGATTTGAAC+TGG | + | chr1_1:64804105-64804124 | None:intergenic | 25.0% |
| ! | ATCATGTCTTAAATATCGAT+AGG | - | chr1_1:64804111-64804130 | Msa0036350:intron | 25.0% |
| !! | TCATAACATATCTTCCTTTT+TGG | - | chr1_1:64804228-64804247 | Msa0036350:CDS | 25.0% |
| ! | TTCTTCTATGTATACATCTT+GGG | - | chr1_1:64804497-64804516 | Msa0036350:CDS | 25.0% |
| ! | GTAACATATCTTATGACTTA+TGG | - | chr1_1:64804534-64804553 | Msa0036350:CDS | 25.0% |
| ! | AGCATATAGAATATAAAGCT+TGG | + | chr1_1:64804750-64804769 | None:intergenic | 25.0% |
| ! | TATCGTCTGTTAATTTAGAT+CGG | + | chr1_1:64804891-64804910 | None:intergenic | 25.0% |
| ! | TTGGAACTGTCTTAAAAAAT+TGG | - | chr1_1:64805219-64805238 | Msa0036350:intron | 25.0% |
| ! | TTCATAATGTTGAATGAATG+TGG | + | chr1_1:64805256-64805275 | None:intergenic | 25.0% |
| ! | GCTTGTAATAGTTAATTGTA+AGG | - | chr1_1:64805344-64805363 | Msa0036350:intron | 25.0% |
| ! | TAATCAATTATAAAGCTGCA+AGG | - | chr1_1:64805390-64805409 | Msa0036350:intron | 25.0% |
| ! | TATATACTCTTCTATCAAAC+TGG | - | chr1_1:64805424-64805443 | Msa0036350:intron | 25.0% |
| ! | ATATACTCTTCTATCAAACT+GGG | - | chr1_1:64805425-64805444 | Msa0036350:intron | 25.0% |
| ! | ACTAATGAATGATATCTTAC+AGG | + | chr1_1:64805548-64805567 | None:intergenic | 25.0% |
| !!! | TATGCTCTGAAATTGAATAA+AGG | - | chr1_1:64805590-64805609 | Msa0036350:intron | 25.0% |
| !!! | GTATTTTTTGTTCAAATCTC+TGG | - | chr1_1:64805702-64805721 | Msa0036350:intron | 25.0% |
| ! | ACTATTGTCTAAATCATACA+CGG | + | chr1_1:64805796-64805815 | None:intergenic | 25.0% |
| ! | AGACAATAGTTAATCTTTGT+TGG | - | chr1_1:64805806-64805825 | Msa0036350:intron | 25.0% |
| ! | ACATTAGTGATTAGAGTTTA+AGG | - | chr1_1:64805832-64805851 | Msa0036350:intron | 25.0% |
| ! | AAGGATAAAACAGAGAATTA+AGG | + | chr1_1:64806121-64806140 | None:intergenic | 25.0% |
| !!! | TTGGTAAGTATTGAATAGTA+AGG | + | chr1_1:64806220-64806239 | None:intergenic | 25.0% |
| ! | CAAATTTAGTAATGAGCATT+GGG | + | chr1_1:64806298-64806317 | None:intergenic | 25.0% |
| ! | TCAAATTTAGTAATGAGCAT+TGG | + | chr1_1:64806299-64806318 | None:intergenic | 25.0% |
| ! | GTTTGTAATACACTATTCTT+TGG | - | chr1_1:64806605-64806624 | Msa0036350:intron | 25.0% |
| !!! | TGAAACTTAGATTTTGATTG+GGG | - | chr1_1:64806665-64806684 | Msa0036350:intron | 25.0% |
| !! | CTTTTGCAATCATTATTAGA+AGG | + | chr1_1:64806695-64806714 | None:intergenic | 25.0% |
| ! | CTAATAATGATTGCAAAAGA+TGG | - | chr1_1:64806696-64806715 | Msa0036350:intron | 25.0% |
| ! | GATTATGATAAAAACAGTGA+CGG | + | chr1_1:64806908-64806927 | None:intergenic | 25.0% |
| !!! | CTGTTTTTATCATAATCTGA+TGG | - | chr1_1:64806911-64806930 | Msa0036350:intron | 25.0% |
| ! | TGCTGCAAAAAAGATAAAAT+GGG | + | chr1_1:64807196-64807215 | None:intergenic | 25.0% |
| ! | ATGCTGCAAAAAAGATAAAA+TGG | + | chr1_1:64807197-64807216 | None:intergenic | 25.0% |
| ! | ATACCATAAGATATCTAGAA+TGG | - | chr1_1:64807309-64807328 | Msa0036350:intron | 25.0% |
| !!! | ACTACTTTTTATGCATTTAG+AGG | - | chr1_1:64807445-64807464 | Msa0036350:intron | 25.0% |
| ! | GGAAAGAAAATCAAAGAATA+AGG | + | chr1_1:64807523-64807542 | None:intergenic | 25.0% |
| !! | TTGATTTTCTTTCCTCATTT+TGG | - | chr1_1:64807529-64807548 | Msa0036350:intron | 25.0% |
| !! | ACTGTTCTTTTACTCTATAA+TGG | - | chr1_1:64807675-64807694 | Msa0036350:intron | 25.0% |
| !!! | AAGTTATGCGTTATTTTTAC+TGG | - | chr1_1:64808043-64808062 | Msa0036350:intron | 25.0% |
| ! | TAGCTACATATTCTGATATA+AGG | + | chr1_1:64808201-64808220 | None:intergenic | 25.0% |
| ! | ACATAATGCATTTCAATAAC+CGG | - | chr1_1:64808300-64808319 | Msa0036350:intron | 25.0% |
| ! | TATTAACTGATATGCAATCA+AGG | + | chr1_1:64808438-64808457 | None:intergenic | 25.0% |
| !!! | TGATTTTTTTTTGTTGCCTT+TGG | - | chr1_1:64808829-64808848 | Msa0036350:intron | 25.0% |
| ! | ATATACGTATTATCTCACAA+TGG | - | chr1_1:64808973-64808992 | Msa0036350:intron | 25.0% |
| ! | TAAATACCTATGATAGTCAA+AGG | - | chr1_1:64809301-64809320 | Msa0036350:five_prime_UTR | 25.0% |
| !! | CGTTTCTAGATTTTTGATCA+AGG | + | chr1_1:64802821-64802840 | None:intergenic | 30.0% |
| CTGAATTTCAGGATAAAACT+AGG | + | chr1_1:64802893-64802912 | None:intergenic | 30.0% | |
| !!! | TTTGTGCTGTTGATGATTTT+TGG | - | chr1_1:64802917-64802936 | Msa0036350:three_prime_UTR | 30.0% |
| ! | TGGAGAGAATTTGTTTGATT+AGG | - | chr1_1:64803176-64803195 | Msa0036350:CDS | 30.0% |
| ! | GGAGAGAATTTGTTTGATTA+GGG | - | chr1_1:64803177-64803196 | Msa0036350:CDS | 30.0% |
| ! | GAATTTGTTTGATTAGGGAA+TGG | - | chr1_1:64803182-64803201 | Msa0036350:CDS | 30.0% |
| AATAAGATCTATAGATACGG+GGG | - | chr1_1:64803271-64803290 | Msa0036350:intron | 30.0% | |
| GCAAAAAAGTAGAGTTAGAA+AGG | - | chr1_1:64803385-64803404 | Msa0036350:intron | 30.0% | |
| TATTTCATAGCACACCAAAA+TGG | + | chr1_1:64803579-64803598 | None:intergenic | 30.0% | |
| !! | TTTTGGTGTGCTATGAAATA+TGG | - | chr1_1:64803579-64803598 | Msa0036350:intron | 30.0% |
| !!! | TTTTTGTTTTCACCTTTCTG+AGG | - | chr1_1:64803617-64803636 | Msa0036350:intron | 30.0% |
| ! | ATCTCAATTTGGTTTATGTC+TGG | + | chr1_1:64803970-64803989 | None:intergenic | 30.0% |
| CATACTGATACATCTCAATT+TGG | + | chr1_1:64803981-64804000 | None:intergenic | 30.0% | |
| CAAATTGAGATGTATCAGTA+TGG | - | chr1_1:64803979-64803998 | Msa0036350:intron | 30.0% | |
| TGCAACATAATATAAACAGC+AGG | + | chr1_1:64804035-64804054 | None:intergenic | 30.0% | |
| AATTTACATGGAACAGTCAA+AGG | + | chr1_1:64804074-64804093 | None:intergenic | 30.0% | |
| TTGACTGTTCCATGTAAATT+AGG | - | chr1_1:64804074-64804093 | Msa0036350:intron | 30.0% | |
| TGACTGTTCCATGTAAATTA+GGG | - | chr1_1:64804075-64804094 | Msa0036350:intron | 30.0% | |
| ATGTCTTAAATATCGATAGG+TGG | - | chr1_1:64804114-64804133 | Msa0036350:intron | 30.0% | |
| TGTCTTAAATATCGATAGGT+GGG | - | chr1_1:64804115-64804134 | Msa0036350:intron | 30.0% | |
| GAATCTCAGATTGTAGATTA+CGG | - | chr1_1:64804151-64804170 | Msa0036350:CDS | 30.0% | |
| ! | AATTTGAAGTGTGTCTTACT+TGG | + | chr1_1:64804344-64804363 | None:intergenic | 30.0% |
| !!! | CAAATTTTTTGTCCTGTAGA+AGG | - | chr1_1:64804383-64804402 | Msa0036350:intron | 30.0% |
| CTTCTTCTATGTATACATCT+TGG | - | chr1_1:64804496-64804515 | Msa0036350:CDS | 30.0% | |
| !!! | TGATTGTTTTAATGATGCAG+TGG | - | chr1_1:64804629-64804648 | Msa0036350:CDS | 30.0% |
| !!! | TGATTTTGATTGACAACATC+AGG | - | chr1_1:64804697-64804716 | Msa0036350:intron | 30.0% |
| AAAGCTTGGTAAGCTATAAA+TGG | + | chr1_1:64804736-64804755 | None:intergenic | 30.0% | |
| GCTGTTCAATCTCAAATTAA+CGG | - | chr1_1:64804952-64804971 | Msa0036350:intron | 30.0% | |
| TCCAACAGATATTACAAGAT+GGG | + | chr1_1:64805204-64805223 | None:intergenic | 30.0% | |
| TTCCAACAGATATTACAAGA+TGG | + | chr1_1:64805205-64805224 | None:intergenic | 30.0% | |
| TATACTCTTCTATCAAACTG+GGG | - | chr1_1:64805426-64805445 | Msa0036350:intron | 30.0% | |
| TGTATCTTTATAGGATGTGT+AGG | - | chr1_1:64805465-64805484 | Msa0036350:intron | 30.0% | |
| GTATCTTTATAGGATGTGTA+GGG | - | chr1_1:64805466-64805485 | Msa0036350:intron | 30.0% | |
| GCAAGACTTAATTTAGTACA+TGG | - | chr1_1:64806723-64806742 | Msa0036350:intron | 30.0% | |
| TAGTACATGGTTATCTGTTT+AGG | - | chr1_1:64806736-64806755 | Msa0036350:intron | 30.0% | |
| AGTACATGGTTATCTGTTTA+GGG | - | chr1_1:64806737-64806756 | Msa0036350:intron | 30.0% | |
| AAAGTAAACCTTGATCACAT+TGG | - | chr1_1:64806784-64806803 | Msa0036350:intron | 30.0% | |
| GTTTAGCTATCCCATAAAAA+AGG | - | chr1_1:64806806-64806825 | Msa0036350:intron | 30.0% | |
| !!! | AGCAGTGTATCCTTTTTTAT+GGG | + | chr1_1:64806819-64806838 | None:intergenic | 30.0% |
| ATAATTTCTCAATTACCTGC+AGG | - | chr1_1:64807055-64807074 | Msa0036350:intron | 30.0% | |
| ! | TGGGACTTGTTTATTAACTA+TGG | - | chr1_1:64807100-64807119 | Msa0036350:intron | 30.0% |
| ! | GGGACTTGTTTATTAACTAT+GGG | - | chr1_1:64807101-64807120 | Msa0036350:intron | 30.0% |
| AATCCTACAATTCATGGAAA+CGG | - | chr1_1:64807257-64807276 | Msa0036350:intron | 30.0% | |
| ACTCCATTCTAGATATCTTA+TGG | + | chr1_1:64807315-64807334 | None:intergenic | 30.0% | |
| AGTATTTGGAAAGCAATGAA+TGG | + | chr1_1:64807428-64807447 | None:intergenic | 30.0% | |
| CGCAAAAGATATACCAATTT+GGG | - | chr1_1:64807581-64807600 | Msa0036350:CDS | 30.0% | |
| GGAGAAAAAATTACCCAAAT+TGG | + | chr1_1:64807597-64807616 | None:intergenic | 30.0% | |
| AACAACGTTCAAGAATTTCT+AGG | + | chr1_1:64807840-64807859 | None:intergenic | 30.0% | |
| AACTGACATGAAGAATTTGT+CGG | - | chr1_1:64807861-64807880 | Msa0036350:intron | 30.0% | |
| ! | TCTTTTATAACTCGCAGATT+TGG | - | chr1_1:64808324-64808343 | Msa0036350:intron | 30.0% |
| GCAATTCTTAGCAGTTAAAA+TGG | - | chr1_1:64808527-64808546 | Msa0036350:intron | 30.0% | |
| TAGCATTCTTGTTAGTTAGA+AGG | - | chr1_1:64808570-64808589 | Msa0036350:intron | 30.0% | |
| TCAGTCTACACATCATATAT+AGG | + | chr1_1:64808939-64808958 | None:intergenic | 30.0% | |
| ! | CAATATTGAAAGCTCGTTTT+TGG | - | chr1_1:64809133-64809152 | Msa0036350:CDS | 30.0% |
| TGTTGAAGTCTATATGAACT+AGG | - | chr1_1:64809199-64809218 | Msa0036350:CDS | 30.0% | |
| AAGTTTCCTTTGACTATCAT+AGG | + | chr1_1:64809310-64809329 | None:intergenic | 30.0% | |
| AGGAAACTTTGTTGAATGTT+TGG | - | chr1_1:64809321-64809340 | Msa0036350:five_prime_UTR | 30.0% | |
| GAGGATGAATGAAAAATCCT+CGG | + | chr1_1:64802554-64802573 | None:intergenic | 35.0% | |
| TTCGAAGAAGAGTAATGAGT+TGG | - | chr1_1:64802665-64802684 | Msa0036350:three_prime_UTR | 35.0% | |
| ! | AAGAGTAATGAGTTGGAGAA+GGG | - | chr1_1:64802672-64802691 | Msa0036350:three_prime_UTR | 35.0% |
| ACCATGAGAAAAGGAAGAAA+CGG | + | chr1_1:64802774-64802793 | None:intergenic | 35.0% | |
| AAACTTACCACCATGAGAAA+AGG | + | chr1_1:64802783-64802802 | None:intergenic | 35.0% | |
| ! | CTAGATTTTTGATCAAGGGT+TGG | + | chr1_1:64802816-64802835 | None:intergenic | 35.0% |
| GCACAAAAACTCTGAATTTC+AGG | + | chr1_1:64802904-64802923 | None:intergenic | 35.0% | |
| GGACACAAATACAACACAAA+GGG | + | chr1_1:64803142-64803161 | None:intergenic | 35.0% | |
| AGGACACAAATACAACACAA+AGG | + | chr1_1:64803143-64803162 | None:intergenic | 35.0% | |
| TTACTCTAGTTGCAAAGCTA+CGG | + | chr1_1:64803353-64803372 | None:intergenic | 35.0% | |
| AACTAGAGTAACTTCACAGA+TGG | - | chr1_1:64803362-64803381 | Msa0036350:intron | 35.0% | |
| ACTAGAGTAACTTCACAGAT+GGG | - | chr1_1:64803363-64803382 | Msa0036350:intron | 35.0% | |
| TAGAGTTAGAAAGGAGCTTT+GGG | - | chr1_1:64803394-64803413 | Msa0036350:intron | 35.0% | |
| ACTAAACTAAGACACCAGAT+TGG | - | chr1_1:64803423-64803442 | Msa0036350:intron | 35.0% | |
| TTGTTGAGAATGTGTCTAGT+TGG | - | chr1_1:64803724-64803743 | Msa0036350:CDS | 35.0% | |
| AACAGTCAAAGGTTTATGTC+TGG | + | chr1_1:64804063-64804082 | None:intergenic | 35.0% | |
| GACTGTTCCATGTAAATTAG+GGG | - | chr1_1:64804076-64804095 | Msa0036350:intron | 35.0% | |
| GTCTTAAATATCGATAGGTG+GGG | - | chr1_1:64804116-64804135 | Msa0036350:intron | 35.0% | |
| TCTTAAATATCGATAGGTGG+GGG | - | chr1_1:64804117-64804136 | Msa0036350:intron | 35.0% | |
| !! | AACATATCTTCCTTTTTGGC+AGG | - | chr1_1:64804232-64804251 | Msa0036350:CDS | 35.0% |
| AAAATACAGTCCTGCCAAAA+AGG | + | chr1_1:64804245-64804264 | None:intergenic | 35.0% | |
| !! | GGACTGTATTTTTACCTCTT+TGG | - | chr1_1:64804253-64804272 | Msa0036350:CDS | 35.0% |
| ACAACATGAAAAAGCCAAAG+AGG | + | chr1_1:64804270-64804289 | None:intergenic | 35.0% | |
| AAATTGTCTTCTCTGTTTCG+TGG | - | chr1_1:64804359-64804378 | Msa0036350:intron | 35.0% | |
| ATCAATTCAAAAGCGATGAG+AGG | + | chr1_1:64804678-64804697 | None:intergenic | 35.0% | |
| CTTCAAATCTTCCTAAACTG+TGG | - | chr1_1:64804768-64804787 | Msa0036350:intron | 35.0% | |
| ! | CATTGCACAGTTTTCAATGT+TGG | - | chr1_1:64804861-64804880 | Msa0036350:intron | 35.0% |
| GTCTGTTAATTTAGATCGGA+CGG | + | chr1_1:64804887-64804906 | None:intergenic | 35.0% | |
| TGACATGAGTAGTGCTTATA+AGG | - | chr1_1:64805059-64805078 | Msa0036350:intron | 35.0% | |
| GAGTAGTGCTTATAAGGTTT+CGG | - | chr1_1:64805065-64805084 | Msa0036350:intron | 35.0% | |
| GATAAACTTTCAATAGGAGC+TGG | - | chr1_1:64805150-64805169 | Msa0036350:intron | 35.0% | |
| CAACAGATATTACAAGATGG+GGG | + | chr1_1:64805202-64805221 | None:intergenic | 35.0% | |
| CCAACAGATATTACAAGATG+GGG | + | chr1_1:64805203-64805222 | None:intergenic | 35.0% | |
| ATATGACAGATGAAGCAGTA+TGG | - | chr1_1:64805513-64805532 | Msa0036350:CDS | 35.0% | |
| TATGACAGATGAAGCAGTAT+GGG | - | chr1_1:64805514-64805533 | Msa0036350:CDS | 35.0% | |
| !! | CTATTTCAGGAGTATCACTT+AGG | + | chr1_1:64805618-64805637 | None:intergenic | 35.0% |
| CTAAGTGATACTCCTGAAAT+AGG | - | chr1_1:64805616-64805635 | Msa0036350:intron | 35.0% | |
| ! | TAGATGTCAGATAGGGTATT+CGG | + | chr1_1:64805644-64805663 | None:intergenic | 35.0% |
| TTAGAGTTTAAGGACCTGTT+TGG | - | chr1_1:64805842-64805861 | Msa0036350:intron | 35.0% | |
| GTTTCTAATGTGTACAGGAA+AGG | + | chr1_1:64806010-64806029 | None:intergenic | 35.0% | |
| ! | TTCGTGTTTCTAATGTGTAC+AGG | + | chr1_1:64806015-64806034 | None:intergenic | 35.0% |
| !! | ACAAATGGTTCTGACATAAC+AGG | + | chr1_1:64806175-64806194 | None:intergenic | 35.0% |
| GGGAAAATAGAAAAGCAAGA+TGG | + | chr1_1:64806278-64806297 | None:intergenic | 35.0% | |
| !! | ATTCTGTTTTTCAGCACTTC+TGG | - | chr1_1:64806327-64806346 | Msa0036350:intron | 35.0% |
| CTTCTGGATTTCAATATCCA+TGG | - | chr1_1:64806343-64806362 | Msa0036350:intron | 35.0% | |
| AGTCAACAATTGTTTCAGAG+AGG | + | chr1_1:64806428-64806447 | None:intergenic | 35.0% | |
| GTACATGGTTATCTGTTTAG+GGG | - | chr1_1:64806738-64806757 | Msa0036350:intron | 35.0% | |
| TAGCTAAACCAATGTGATCA+AGG | + | chr1_1:64806795-64806814 | None:intergenic | 35.0% | |
| !!! | CAGCAGTGTATCCTTTTTTA+TGG | + | chr1_1:64806820-64806839 | None:intergenic | 35.0% |
| ! | TATCTAGAATGGAGTAGAGA+AGG | - | chr1_1:64807320-64807339 | Msa0036350:intron | 35.0% |
| TAAATTTCAGGGAACACCAT+CGG | - | chr1_1:64807557-64807576 | Msa0036350:intron | 35.0% | |
| GCGCAAAAGATATACCAATT+TGG | - | chr1_1:64807580-64807599 | Msa0036350:CDS | 35.0% | |
| GATATAGATGAGTAGCTTCT+AGG | + | chr1_1:64807708-64807727 | None:intergenic | 35.0% | |
| TGAAAAACCCAAAGCAATCA+CGG | + | chr1_1:64807740-64807759 | None:intergenic | 35.0% | |
| !! | TGCTTTGGGTTTTTCAATCA+CGG | - | chr1_1:64807744-64807763 | Msa0036350:intron | 35.0% |
| ! | AGGCATTTTCTTCACTGTAT+CGG | + | chr1_1:64808142-64808161 | None:intergenic | 35.0% |
| AGAAGTTACAAAATACAGCC+AGG | - | chr1_1:64808376-64808395 | Msa0036350:intron | 35.0% | |
| ! | GAAGTTTTTCATATTCCTCC+TGG | + | chr1_1:64808397-64808416 | None:intergenic | 35.0% |
| ACAACTGTTCTCTTATGATG+TGG | + | chr1_1:64808490-64808509 | None:intergenic | 35.0% | |
| ! | CTTTGAAGAGCAGATTAATG+TGG | - | chr1_1:64808701-64808720 | Msa0036350:intron | 35.0% |
| TATTATCTCACAATGGCTTG+TGG | - | chr1_1:64808980-64808999 | Msa0036350:intron | 35.0% | |
| GCAGATACATTAATCACACT+TGG | + | chr1_1:64809024-64809043 | None:intergenic | 35.0% | |
| CTTTGTTGAATGTTTGGTTG+AGG | - | chr1_1:64809327-64809346 | Msa0036350:five_prime_UTR | 35.0% | |
| ! | TCACTTAATGCTGTTTGATG+TGG | - | chr1_1:64809386-64809405 | Msa0036350:five_prime_UTR | 35.0% |
| GGCGTAAAACAGAAGACAAA+AGG | - | chr1_1:64802443-64802462 | Msa0036350:three_prime_UTR | 40.0% | |
| GATGAATGAAAAATCCTCGG+AGG | + | chr1_1:64802551-64802570 | None:intergenic | 40.0% | |
| AAACACGCGTATCTATGAAG+AGG | + | chr1_1:64802573-64802592 | None:intergenic | 40.0% | |
| ! | GAAGAGTAATGAGTTGGAGA+AGG | - | chr1_1:64802671-64802690 | Msa0036350:three_prime_UTR | 40.0% |
| ! | ACCGTTTCTTCCTTTTCTCA+TGG | - | chr1_1:64802770-64802789 | Msa0036350:three_prime_UTR | 40.0% |
| ! | GTTTCTTCCTTTTCTCATGG+TGG | - | chr1_1:64802773-64802792 | Msa0036350:three_prime_UTR | 40.0% |
| TTGACACATGCATTGAAAGG+GGG | + | chr1_1:64802957-64802976 | None:intergenic | 40.0% | |
| CTTGACACATGCATTGAAAG+GGG | + | chr1_1:64802958-64802977 | None:intergenic | 40.0% | |
| CCTTGACACATGCATTGAAA+GGG | + | chr1_1:64802959-64802978 | None:intergenic | 40.0% | |
| ! | TTTGGAATAGGGACTCTGTA+AGG | - | chr1_1:64803104-64803123 | Msa0036350:intron | 40.0% |
| TTGGAATAGGGACTCTGTAA+GGG | - | chr1_1:64803105-64803124 | Msa0036350:intron | 40.0% | |
| GTGTCCTAGTGTAGTGAAAT+TGG | - | chr1_1:64803156-64803175 | Msa0036350:CDS | 40.0% | |
| CTCTCCAATTTCACTACACT+AGG | + | chr1_1:64803163-64803182 | None:intergenic | 40.0% | |
| GTAGAGTTAGAAAGGAGCTT+TGG | - | chr1_1:64803393-64803412 | Msa0036350:intron | 40.0% | |
| ! | AGTGGACATTTTCTCCAATC+TGG | + | chr1_1:64803440-64803459 | None:intergenic | 40.0% |
| AGCAGATGCACAAAATACAG+TGG | - | chr1_1:64803470-64803489 | Msa0036350:intron | 40.0% | |
| !! | TTTTCCTTTGGCTTATGCGT+CGG | + | chr1_1:64803510-64803529 | None:intergenic | 40.0% |
| GATAAGTAGTCCATCCCTAA+CGG | + | chr1_1:64803844-64803863 | None:intergenic | 40.0% | |
| !! | TTAGGGATGGACTACTTATC+CGG | - | chr1_1:64803844-64803863 | Msa0036350:intron | 40.0% |
| TCTTCCATACGTCTTACCTA+GGG | + | chr1_1:64803883-64803902 | None:intergenic | 40.0% | |
| !! | AGAGATACCAGAGAAGTATC+TGG | - | chr1_1:64803900-64803919 | Msa0036350:intron | 40.0% |
| !! | GAGATACCAGAGAAGTATCT+GGG | - | chr1_1:64803901-64803920 | Msa0036350:intron | 40.0% |
| AAAAGTCCCAGATACTTCTC+TGG | + | chr1_1:64803910-64803929 | None:intergenic | 40.0% | |
| TTTCATGTTGTGATAGCACG+AGG | - | chr1_1:64804279-64804298 | Msa0036350:CDS | 40.0% | |
| CAGCAACAAAAACCTTCTAC+AGG | + | chr1_1:64804398-64804417 | None:intergenic | 40.0% | |
| ! | CTATTTTGTTCACGTGCAGT+GGG | - | chr1_1:64804426-64804445 | Msa0036350:intron | 40.0% |
| GTAGCTATGACTGAATGACA+AGG | + | chr1_1:64804454-64804473 | None:intergenic | 40.0% | |
| AGTCATAGCTACACCATTAC+TGG | - | chr1_1:64804462-64804481 | Msa0036350:CDS | 40.0% | |
| ATACATCTTGGGAGCAGTTA+TGG | - | chr1_1:64804508-64804527 | Msa0036350:CDS | 40.0% | |
| GACTTATGGCACAACTATCA+TGG | - | chr1_1:64804548-64804567 | Msa0036350:CDS | 40.0% | |
| TGCCACATTTAAGGAGTCTA+GGG | + | chr1_1:64804799-64804818 | None:intergenic | 40.0% | |
| TTGCCACATTTAAGGAGTCT+AGG | + | chr1_1:64804800-64804819 | None:intergenic | 40.0% | |
| CTCCTTAAATGTGGCAACTT+TGG | - | chr1_1:64804803-64804822 | Msa0036350:CDS | 40.0% | |
| GTCCAAAGTTGCCACATTTA+AGG | + | chr1_1:64804808-64804827 | None:intergenic | 40.0% | |
| AAACTGTGCAATGCTGTTAC+AGG | + | chr1_1:64804854-64804873 | None:intergenic | 40.0% | |
| TTGTATGTTTATCCTGCAGC+AGG | - | chr1_1:64804984-64805003 | Msa0036350:intron | 40.0% | |
| TACCTTGCAAGTCAGTCTTA+TGG | - | chr1_1:64805095-64805114 | Msa0036350:intron | 40.0% | |
| CCCCATCTTGTAATATCTGT+TGG | - | chr1_1:64805200-64805219 | Msa0036350:intron | 40.0% | |
| GTTAATTGTAAGGCTGCACA+TGG | - | chr1_1:64805354-64805373 | Msa0036350:intron | 40.0% | |
| ! | GTCATATTTTCCTCATCTCC+AGG | + | chr1_1:64805500-64805519 | None:intergenic | 40.0% |
| TACCCTATCTGACATCTACT+TGG | - | chr1_1:64805646-64805665 | Msa0036350:intron | 40.0% | |
| TGCCAAGTAGATGTCAGATA+GGG | + | chr1_1:64805651-64805670 | None:intergenic | 40.0% | |
| TTGCCAAGTAGATGTCAGAT+AGG | + | chr1_1:64805652-64805671 | None:intergenic | 40.0% | |
| TAACCAACTGCCACTCAATT+AGG | + | chr1_1:64806522-64806541 | None:intergenic | 40.0% | |
| TGGCACAATCCTACAATTCA+TGG | - | chr1_1:64807251-64807270 | Msa0036350:intron | 40.0% | |
| TGACCGTTTCCATGAATTGT+AGG | + | chr1_1:64807263-64807282 | None:intergenic | 40.0% | |
| ATGGTATTTGACGACGAACA+TGG | + | chr1_1:64807296-64807315 | None:intergenic | 40.0% | |
| ! | AAATGTGTTTTGCAGTCTGC+AGG | - | chr1_1:64807376-64807395 | Msa0036350:CDS | 40.0% |
| ! | TTTTGCAGTCTGCAGGATAT+TGG | - | chr1_1:64807383-64807402 | Msa0036350:CDS | 40.0% |
| AAATTTCAGGGAACACCATC+GGG | - | chr1_1:64807558-64807577 | Msa0036350:CDS | 40.0% | |
| TCAAAATCCCGTGATTGCTT+TGG | - | chr1_1:64807729-64807748 | Msa0036350:intron | 40.0% | |
| CAAAATCCCGTGATTGCTTT+GGG | - | chr1_1:64807730-64807749 | Msa0036350:intron | 40.0% | |
| GAAAAACCCAAAGCAATCAC+GGG | + | chr1_1:64807739-64807758 | None:intergenic | 40.0% | |
| !! | GGTTTTTCAATCACGGATCA+AGG | - | chr1_1:64807751-64807770 | Msa0036350:intron | 40.0% |
| TGACATGAAGAATTTGTCGG+TGG | - | chr1_1:64807864-64807883 | Msa0036350:intron | 40.0% | |
| AATAGACGAAGGAAGTAGAG+AGG | - | chr1_1:64807926-64807945 | Msa0036350:intron | 40.0% | |
| !!! | TTTTTTGCGCTGGAAGTTCA+GGG | - | chr1_1:64807961-64807980 | Msa0036350:intron | 40.0% |
| ! | CATTTTCTTCACTGTATCGG+GGG | + | chr1_1:64808139-64808158 | None:intergenic | 40.0% |
| ! | GCATTTTCTTCACTGTATCG+GGG | + | chr1_1:64808140-64808159 | None:intergenic | 40.0% |
| ! | GGCATTTTCTTCACTGTATC+GGG | + | chr1_1:64808141-64808160 | None:intergenic | 40.0% |
| ACAGTGAAGAAAATGCCTAG+AGG | - | chr1_1:64808144-64808163 | Msa0036350:intron | 40.0% | |
| CAGTGAAGAAAATGCCTAGA+GGG | - | chr1_1:64808145-64808164 | Msa0036350:intron | 40.0% | |
| AGTGAAGAAAATGCCTAGAG+GGG | - | chr1_1:64808146-64808165 | Msa0036350:intron | 40.0% | |
| TCTGCGAGTTATAAAAGAGC+CGG | + | chr1_1:64808322-64808341 | None:intergenic | 40.0% | |
| AGTTACAAAATACAGCCAGG+AGG | - | chr1_1:64808379-64808398 | Msa0036350:intron | 40.0% | |
| ACTAACAAGAATGCTACTCG+TGG | + | chr1_1:64808566-64808585 | None:intergenic | 40.0% | |
| ! | ACTGCACTGATACATATCTC+AGG | - | chr1_1:64808787-64808806 | Msa0036350:intron | 40.0% |
| ! | CTGCACTGATACATATCTCA+GGG | - | chr1_1:64808788-64808807 | Msa0036350:intron | 40.0% |
| ACACATCAGAAGTCAACCAA+AGG | + | chr1_1:64808848-64808867 | None:intergenic | 40.0% | |
| TGCAGCAATGCACAGTTTAA+GGG | + | chr1_1:64809115-64809134 | None:intergenic | 40.0% | |
| TTGCAGCAATGCACAGTTTA+AGG | + | chr1_1:64809116-64809135 | None:intergenic | 40.0% | |
| TATGAATCCTTAACTGCGCA+TGG | + | chr1_1:64809232-64809251 | None:intergenic | 40.0% | |
| ! | AAGAAGAGTGTGCGTGACTT+TGG | + | chr1_1:64802510-64802529 | None:intergenic | 45.0% |
| GACTGAAGAGAGAGAAAGGT+TGG | + | chr1_1:64802612-64802631 | None:intergenic | 45.0% | |
| CAGAGACTGAAGAGAGAGAA+AGG | + | chr1_1:64802616-64802635 | None:intergenic | 45.0% | |
| TTCAGTCTCTGCGATTTCTG+CGG | - | chr1_1:64802625-64802644 | Msa0036350:three_prime_UTR | 45.0% | |
| GAGAACAAGGAGAAGAGAGA+AGG | + | chr1_1:64802743-64802762 | None:intergenic | 45.0% | |
| AACGGTCAAGCTTGAGAACA+AGG | + | chr1_1:64802756-64802775 | None:intergenic | 45.0% | |
| CCCTTTCAATGCATGTGTCA+AGG | - | chr1_1:64802956-64802975 | Msa0036350:CDS | 45.0% | |
| GCCTTGACACATGCATTGAA+AGG | + | chr1_1:64802960-64802979 | None:intergenic | 45.0% | |
| CATCTGCTTCATCGTTAGAG+TGG | + | chr1_1:64803458-64803477 | None:intergenic | 45.0% | |
| ! | TTTCCTTTGGCTTATGCGTC+GGG | + | chr1_1:64803509-64803528 | None:intergenic | 45.0% |
| CTTCACATGCATCCTCAGAA+AGG | + | chr1_1:64803632-64803651 | None:intergenic | 45.0% | |
| CTGAGGATGCATGTGAAGTT+AGG | - | chr1_1:64803634-64803653 | Msa0036350:intron | 45.0% | |
| ACCTGTGTTGTGCCATATCT+GGG | - | chr1_1:64803759-64803778 | Msa0036350:CDS | 45.0% | |
| CACAAATTGGCACCCAGATA+TGG | + | chr1_1:64803774-64803793 | None:intergenic | 45.0% | |
| TAACCGGATTTGGATCCGTT+AGG | - | chr1_1:64803826-64803845 | Msa0036350:intron | 45.0% | |
| AACCGGATTTGGATCCGTTA+GGG | - | chr1_1:64803827-64803846 | Msa0036350:intron | 45.0% | |
| ! | ATCCCTAACGGATCCAAATC+CGG | + | chr1_1:64803832-64803851 | None:intergenic | 45.0% |
| CTCTTCCATACGTCTTACCT+AGG | + | chr1_1:64803884-64803903 | None:intergenic | 45.0% | |
| GAGATGTATCAGTATGGGTG+TGG | - | chr1_1:64803985-64804004 | Msa0036350:intron | 45.0% | |
| ATGTATCAGTATGGGTGTGG+TGG | - | chr1_1:64803988-64804007 | Msa0036350:intron | 45.0% | |
| TGTATCAGTATGGGTGTGGT+GGG | - | chr1_1:64803989-64804008 | Msa0036350:intron | 45.0% | |
| CTGGTAGCCCCTAATTTACA+TGG | + | chr1_1:64804086-64804105 | None:intergenic | 45.0% | |
| !! | GCTATTTTGTTCACGTGCAG+TGG | - | chr1_1:64804425-64804444 | Msa0036350:intron | 45.0% |
| CATAGCTACACCATTACTGG+TGG | - | chr1_1:64804465-64804484 | Msa0036350:CDS | 45.0% | |
| AGCTCAAATGCCACCAGTAA+TGG | + | chr1_1:64804478-64804497 | None:intergenic | 45.0% | |
| GACAACATCAGGTACTTGTC+TGG | - | chr1_1:64804708-64804727 | Msa0036350:intron | 45.0% | |
| GTCCCTAGACTCCTTAAATG+TGG | - | chr1_1:64804794-64804813 | Msa0036350:CDS | 45.0% | |
| AATGCTGTTACAGGAGCAGA+AGG | + | chr1_1:64804845-64804864 | None:intergenic | 45.0% | |
| TTATCCTGCAGCAGGCAATA+CGG | - | chr1_1:64804992-64805011 | Msa0036350:intron | 45.0% | |
| !! | CTCCATAAGACTGACTTGCA+AGG | + | chr1_1:64805100-64805119 | None:intergenic | 45.0% |
| ! | CTTTAGAAGGGTGAACACTG+TGG | + | chr1_1:64806384-64806403 | None:intergenic | 45.0% |
| ATTAGGATGCAGAGAGGTCA+AGG | + | chr1_1:64806505-64806524 | None:intergenic | 45.0% | |
| CACTCAATTAGGATGCAGAG+AGG | + | chr1_1:64806511-64806530 | None:intergenic | 45.0% | |
| CTCTCTGCATCCTAATTGAG+TGG | - | chr1_1:64806509-64806528 | Msa0036350:intron | 45.0% | |
| CATCCTAATTGAGTGGCAGT+TGG | - | chr1_1:64806516-64806535 | Msa0036350:intron | 45.0% | |
| CGTTTCTCGTTTGTACGAAG+TGG | - | chr1_1:64807231-64807250 | Msa0036350:CDS | 45.0% | |
| ! | GTGTTGCTCTTGCACTTTGT+AGG | - | chr1_1:64807494-64807513 | Msa0036350:intron | 45.0% |
| AGCTCCTTGCAACAGAAGAA+GGG | + | chr1_1:64807619-64807638 | None:intergenic | 45.0% | |
| ACTTCCAGCGCAAAAAAGTC+TGG | + | chr1_1:64807958-64807977 | None:intergenic | 45.0% | |
| !!! | CTTTTTTGCGCTGGAAGTTC+AGG | - | chr1_1:64807960-64807979 | Msa0036350:intron | 45.0% |
| CAAAGAACGTGATGCTTGCA+GGG | + | chr1_1:64808735-64808754 | None:intergenic | 45.0% | |
| GTATCAGTGCAGTGACACAA+AGG | + | chr1_1:64808780-64808799 | None:intergenic | 45.0% | |
| !!! | ATGGCTTGTGGTTTTAGACG+AGG | - | chr1_1:64808992-64809011 | Msa0036350:intron | 45.0% |
| ATGCACAGTTTAAGGGAGGT+GGG | + | chr1_1:64809108-64809127 | None:intergenic | 45.0% | |
| AATGCACAGTTTAAGGGAGG+TGG | + | chr1_1:64809109-64809128 | None:intergenic | 45.0% | |
| AGCAATGCACAGTTTAAGGG+AGG | + | chr1_1:64809112-64809131 | None:intergenic | 45.0% | |
| AATGCTACCATGCGCAGTTA+AGG | - | chr1_1:64809222-64809241 | Msa0036350:CDS | 45.0% | |
| GATTCATATCGCTGTCACTG+AGG | - | chr1_1:64809244-64809263 | Msa0036350:exon | 45.0% | |
| !! | AGTGTGCGTGACTTTGGAAC+AGG | + | chr1_1:64802504-64802523 | None:intergenic | 50.0% |
| CTGCGGCAACACAAAAATGC+TGG | - | chr1_1:64802642-64802661 | Msa0036350:three_prime_UTR | 50.0% | |
| CACACAGCACGCAATTGAAG+GGG | + | chr1_1:64803036-64803055 | None:intergenic | 50.0% | |
| CCACACAGCACGCAATTGAA+GGG | + | chr1_1:64803037-64803056 | None:intergenic | 50.0% | |
| ACCACACAGCACGCAATTGA+AGG | + | chr1_1:64803038-64803057 | None:intergenic | 50.0% | |
| CCAAAGGAAAATTGCCCCTG+CGG | - | chr1_1:64803519-64803538 | Msa0036350:CDS | 50.0% | |
| TCACAATCTCGGTGGTGAAG+AGG | - | chr1_1:64803549-64803568 | Msa0036350:intron | 50.0% | |
| CACAATCTCGGTGGTGAAGA+GGG | - | chr1_1:64803550-64803569 | Msa0036350:intron | 50.0% | |
| ! | GGTGAAGAGGGACTCCATTT+TGG | - | chr1_1:64803562-64803581 | Msa0036350:intron | 50.0% |
| GACCTGTGTTGTGCCATATC+TGG | - | chr1_1:64803758-64803777 | Msa0036350:CDS | 50.0% | |
| ACCCAGATATGGCACAACAC+AGG | + | chr1_1:64803763-64803782 | None:intergenic | 50.0% | |
| GGATTTGGATCCGTTAGGGA+TGG | - | chr1_1:64803831-64803850 | Msa0036350:intron | 50.0% | |
| ! | ATATCGATAGGTGGGGGTGT+TGG | - | chr1_1:64804123-64804142 | Msa0036350:intron | 50.0% |
| !! | TATCGATAGGTGGGGGTGTT+GGG | - | chr1_1:64804124-64804143 | Msa0036350:intron | 50.0% |
| ATGTTGTGATAGCACGAGGC+AGG | - | chr1_1:64804283-64804302 | Msa0036350:CDS | 50.0% | |
| CTAGGGACAGACCACAGTTT+AGG | + | chr1_1:64804782-64804801 | None:intergenic | 50.0% | |
| AGGCAATACGGATCTGAGTG+AGG | - | chr1_1:64805004-64805023 | Msa0036350:intron | 50.0% | |
| GGCAATACGGATCTGAGTGA+GGG | - | chr1_1:64805005-64805024 | Msa0036350:intron | 50.0% | |
| AATACGGATCTGAGTGAGGG+TGG | - | chr1_1:64805008-64805027 | Msa0036350:intron | 50.0% | |
| ATACGGATCTGAGTGAGGGT+GGG | - | chr1_1:64805009-64805028 | Msa0036350:intron | 50.0% | |
| ! | ATGTGTAGGGCTTTGATGCC+TGG | - | chr1_1:64805479-64805498 | Msa0036350:intron | 50.0% |
| !! | GGGTATTCGGTGCCTATTTC+AGG | + | chr1_1:64805631-64805650 | None:intergenic | 50.0% |
| GGCAGCAACAAAGAAGACCA+TGG | + | chr1_1:64806363-64806382 | None:intergenic | 50.0% | |
| GGTCAAGGAAAGGTAGGCAA+TGG | + | chr1_1:64806490-64806509 | None:intergenic | 50.0% | |
| CAGAGAGGTCAAGGAAAGGT+AGG | + | chr1_1:64806496-64806515 | None:intergenic | 50.0% | |
| GATGCAGAGAGGTCAAGGAA+AGG | + | chr1_1:64806500-64806519 | None:intergenic | 50.0% | |
| TGCAGTCTGCAGGATATTGG+CGG | - | chr1_1:64807386-64807405 | Msa0036350:CDS | 50.0% | |
| GTGCAAGAGCAACACTGACA+TGG | + | chr1_1:64807489-64807508 | None:intergenic | 50.0% | |
| ! | GGTATATCTTTTGCGCCCGA+TGG | + | chr1_1:64807576-64807595 | None:intergenic | 50.0% |
| TCTCCCCTTCTTCTGTTGCA+AGG | - | chr1_1:64807612-64807631 | Msa0036350:CDS | 50.0% | |
| GCTCCTTGCAACAGAAGAAG+GGG | + | chr1_1:64807618-64807637 | None:intergenic | 50.0% | |
| CAGCTCCTTGCAACAGAAGA+AGG | + | chr1_1:64807620-64807639 | None:intergenic | 50.0% | |
| CTTCTTCTGTTGCAAGGAGC+TGG | - | chr1_1:64807618-64807637 | Msa0036350:CDS | 50.0% | |
| !! | GGTTGGTGGTCAATAGACGA+AGG | - | chr1_1:64807915-64807934 | Msa0036350:intron | 50.0% |
| !!! | GAAGCCAGACTTTTTTGCGC+TGG | - | chr1_1:64807951-64807970 | Msa0036350:intron | 50.0% |
| TCCTCAACAAGTTCCCCTCT+AGG | + | chr1_1:64808162-64808181 | None:intergenic | 50.0% | |
| !! | TAGAGGGGAACTTGTTGAGG+AGG | - | chr1_1:64808161-64808180 | Msa0036350:intron | 50.0% |
| TGGAGACTTCAAGCTGCACT+TGG | - | chr1_1:64808344-64808363 | Msa0036350:intron | 50.0% | |
| GCAAAGAACGTGATGCTTGC+AGG | + | chr1_1:64808736-64808755 | None:intergenic | 50.0% | |
| GCAAGCATCACGTTCTTTGC+AGG | - | chr1_1:64808736-64808755 | Msa0036350:intron | 50.0% | |
| TCCGTTCTTCGATTGTCCCA+CGG | + | chr1_1:64808914-64808933 | None:intergenic | 50.0% | |
| TGCACAGTTTAAGGGAGGTG+GGG | + | chr1_1:64809107-64809126 | None:intergenic | 50.0% | |
| GTTCTTCTTCGCAACCTCCG+AGG | - | chr1_1:64802534-64802553 | Msa0036350:three_prime_UTR | 55.0% | |
| CCCTTCAATTGCGTGCTGTG+TGG | - | chr1_1:64803034-64803053 | Msa0036350:intron | 55.0% | |
| ! | CCGCAGGGGCAATTTTCCTT+TGG | + | chr1_1:64803522-64803541 | None:intergenic | 55.0% |
| ATTGTGATTGCGCACCGCAG+GGG | + | chr1_1:64803536-64803555 | None:intergenic | 55.0% | |
| GATTGTGATTGCGCACCGCA+GGG | + | chr1_1:64803537-64803556 | None:intergenic | 55.0% | |
| AGATTGTGATTGCGCACCGC+AGG | + | chr1_1:64803538-64803557 | None:intergenic | 55.0% | |
| GCGGTGCGCAATCACAATCT+CGG | - | chr1_1:64803538-64803557 | Msa0036350:CDS | 55.0% | |
| GTGCGCAATCACAATCTCGG+TGG | - | chr1_1:64803541-64803560 | Msa0036350:CDS | 55.0% | |
| CTAGGGCTGCTCACTGTATC+CGG | + | chr1_1:64803866-64803885 | None:intergenic | 55.0% | |
| GCAGCCCTAGGTAAGACGTA+TGG | - | chr1_1:64803876-64803895 | Msa0036350:intron | 55.0% | |
| CTGCTCCTTCGATGCCTCAT+GGG | - | chr1_1:64804316-64804335 | Msa0036350:CDS | 55.0% | |
| TGTCTTACTTGGCGCCCATG+AGG | + | chr1_1:64804333-64804352 | None:intergenic | 55.0% | |
| GGAGCAGAAGGCTGCAATGA+AGG | + | chr1_1:64804833-64804852 | None:intergenic | 55.0% | |
| AGATCCGTATTGCCTGCTGC+AGG | + | chr1_1:64804999-64805018 | None:intergenic | 55.0% | |
| ! | GGCTTTGATGCCTGGAGATG+AGG | - | chr1_1:64805487-64805506 | Msa0036350:intron | 55.0% |
| AAACAAGTCCCACCAGCCCA+GGG | + | chr1_1:64807092-64807111 | None:intergenic | 55.0% | |
| TAAACAAGTCCCACCAGCCC+AGG | + | chr1_1:64807093-64807112 | None:intergenic | 55.0% | |
| CAACCTAGCAACCTGCCAAG+AGG | + | chr1_1:64807900-64807919 | None:intergenic | 55.0% | |
| CTCTTGGCAGGTTGCTAGGT+TGG | - | chr1_1:64807898-64807917 | Msa0036350:intron | 55.0% | |
| ! | TTGGCAGGTTGCTAGGTTGG+TGG | - | chr1_1:64807901-64807920 | Msa0036350:intron | 55.0% |
| !! | GCCTAGAGGGGAACTTGTTG+AGG | - | chr1_1:64808158-64808177 | Msa0036350:intron | 55.0% |
| GAACGTGATGCTTGCAGGGA+AGG | + | chr1_1:64808731-64808750 | None:intergenic | 55.0% | |
| !! | AAGAAGTGCCCTATCTGCCG+TGG | - | chr1_1:64808894-64808913 | Msa0036350:intron | 55.0% |
| !! | AGAAGTGCCCTATCTGCCGT+GGG | - | chr1_1:64808895-64808914 | Msa0036350:intron | 55.0% |
| CGATTGTCCCACGGCAGATA+GGG | + | chr1_1:64808905-64808924 | None:intergenic | 55.0% | |
| TCGATTGTCCCACGGCAGAT+AGG | + | chr1_1:64808906-64808925 | None:intergenic | 55.0% | |
| GCCGTGGGACAATCGAAGAA+CGG | - | chr1_1:64808910-64808929 | Msa0036350:intron | 55.0% | |
| GCACCCGACGCATAAGCCAA+AGG | - | chr1_1:64803503-64803522 | Msa0036350:CDS | 60.0% | |
| CGGATACAGTGAGCAGCCCT+AGG | - | chr1_1:64803864-64803883 | Msa0036350:intron | 60.0% | |
| !! | AGGCATCGAAGGAGCAGGCA+AGG | + | chr1_1:64804313-64804332 | None:intergenic | 60.0% |
| !! | CCATGAGGCATCGAAGGAGC+AGG | + | chr1_1:64804318-64804337 | None:intergenic | 60.0% |
| CCTGCTCCTTCGATGCCTCA+TGG | - | chr1_1:64804315-64804334 | Msa0036350:CDS | 60.0% | |
| AGGGCAGCAACATCACCTGC+AGG | + | chr1_1:64807073-64807092 | None:intergenic | 60.0% | |
| TGCAGGTGATGTTGCTGCCC+TGG | - | chr1_1:64807072-64807091 | Msa0036350:intron | 60.0% | |
| GCAGGTGATGTTGCTGCCCT+GGG | - | chr1_1:64807073-64807092 | Msa0036350:intron | 60.0% | |
| CCTAGCAACCTGCCAAGAGG+AGG | + | chr1_1:64807897-64807916 | None:intergenic | 60.0% | |
| CCTCCTCTTGGCAGGTTGCT+AGG | - | chr1_1:64807894-64807913 | Msa0036350:intron | 60.0% | |
| CGTGATGCTTGCAGGGAAGG+AGG | + | chr1_1:64808728-64808747 | None:intergenic | 60.0% | |
| !! | TGGCGCCCATGAGGCATCGA+AGG | + | chr1_1:64804324-64804343 | None:intergenic | 65.0% |
| GTGATGTTGCTGCCCTGGGC+TGG | - | chr1_1:64807077-64807096 | Msa0036350:intron | 65.0% | |
| ! | ATGTTGCTGCCCTGGGCTGG+TGG | - | chr1_1:64807080-64807099 | Msa0036350:intron | 65.0% |
| !! | TGTTGCTGCCCTGGGCTGGT+GGG | - | chr1_1:64807081-64807100 | Msa0036350:intron | 65.0% |
| GGTGGCTGCACTCCTCCTCT+TGG | - | chr1_1:64807882-64807901 | Msa0036350:intron | 65.0% | |
| GCTGCACTCCTCCTCTTGGC+AGG | - | chr1_1:64807886-64807905 | Msa0036350:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 64802405 | 64809497 | 64802405 | ID=Msa0036350;Name=Msa0036350 |
| chr1_1 | mRNA | 64802405 | 64809497 | 64802405 | ID=Msa0036350-mRNA-1;Parent=Msa0036350;Name=Msa0036350-mRNA-1;_AED=0.14;_eAED=0.14;_QI=253|1|1|1|0.92|0.92|14|544|467 |
| chr1_1 | exon | 64802405 | 64803027 | 64802405 | ID=Msa0036350-mRNA-1:exon:20866;Parent=Msa0036350-mRNA-1 |
| chr1_1 | exon | 64803145 | 64803224 | 64803145 | ID=Msa0036350-mRNA-1:exon:20865;Parent=Msa0036350-mRNA-1 |
| chr1_1 | exon | 64803481 | 64803561 | 64803481 | ID=Msa0036350-mRNA-1:exon:20864;Parent=Msa0036350-mRNA-1 |
| chr1_1 | exon | 64803720 | 64803780 | 64803720 | ID=Msa0036350-mRNA-1:exon:20863;Parent=Msa0036350-mRNA-1 |
| chr1_1 | exon | 64803920 | 64803994 | 64803920 | ID=Msa0036350-mRNA-1:exon:20862;Parent=Msa0036350-mRNA-1 |
| chr1_1 | exon | 64804130 | 64804335 | 64804130 | ID=Msa0036350-mRNA-1:exon:20861;Parent=Msa0036350-mRNA-1 |
| chr1_1 | exon | 64804436 | 64804688 | 64804436 | ID=Msa0036350-mRNA-1:exon:20860;Parent=Msa0036350-mRNA-1 |
| chr1_1 | exon | 64804780 | 64804825 | 64804780 | ID=Msa0036350-mRNA-1:exon:20859;Parent=Msa0036350-mRNA-1 |
| chr1_1 | exon | 64805492 | 64805561 | 64805492 | ID=Msa0036350-mRNA-1:exon:20858;Parent=Msa0036350-mRNA-1 |
| chr1_1 | exon | 64806355 | 64806424 | 64806355 | ID=Msa0036350-mRNA-1:exon:20857;Parent=Msa0036350-mRNA-1 |
| chr1_1 | exon | 64807184 | 64807253 | 64807184 | ID=Msa0036350-mRNA-1:exon:20856;Parent=Msa0036350-mRNA-1 |
| chr1_1 | exon | 64807373 | 64807457 | 64807373 | ID=Msa0036350-mRNA-1:exon:20855;Parent=Msa0036350-mRNA-1 |
| chr1_1 | exon | 64807558 | 64807648 | 64807558 | ID=Msa0036350-mRNA-1:exon:20854;Parent=Msa0036350-mRNA-1 |
| chr1_1 | exon | 64809108 | 64809497 | 64809108 | ID=Msa0036350-mRNA-1:exon:20853;Parent=Msa0036350-mRNA-1 |
| chr1_1 | five_prime_UTR | 64809245 | 64809497 | 64809245 | ID=Msa0036350-mRNA-1:five_prime_utr;Parent=Msa0036350-mRNA-1 |
| chr1_1 | CDS | 64809108 | 64809244 | 64809108 | ID=Msa0036350-mRNA-1:cds;Parent=Msa0036350-mRNA-1 |
| chr1_1 | CDS | 64807558 | 64807648 | 64807558 | ID=Msa0036350-mRNA-1:cds;Parent=Msa0036350-mRNA-1 |
| chr1_1 | CDS | 64807373 | 64807457 | 64807373 | ID=Msa0036350-mRNA-1:cds;Parent=Msa0036350-mRNA-1 |
| chr1_1 | CDS | 64807184 | 64807253 | 64807184 | ID=Msa0036350-mRNA-1:cds;Parent=Msa0036350-mRNA-1 |
| chr1_1 | CDS | 64806355 | 64806424 | 64806355 | ID=Msa0036350-mRNA-1:cds;Parent=Msa0036350-mRNA-1 |
| chr1_1 | CDS | 64805492 | 64805561 | 64805492 | ID=Msa0036350-mRNA-1:cds;Parent=Msa0036350-mRNA-1 |
| chr1_1 | CDS | 64804780 | 64804825 | 64804780 | ID=Msa0036350-mRNA-1:cds;Parent=Msa0036350-mRNA-1 |
| chr1_1 | CDS | 64804436 | 64804688 | 64804436 | ID=Msa0036350-mRNA-1:cds;Parent=Msa0036350-mRNA-1 |
| chr1_1 | CDS | 64804130 | 64804335 | 64804130 | ID=Msa0036350-mRNA-1:cds;Parent=Msa0036350-mRNA-1 |
| chr1_1 | CDS | 64803920 | 64803994 | 64803920 | ID=Msa0036350-mRNA-1:cds;Parent=Msa0036350-mRNA-1 |
| chr1_1 | CDS | 64803720 | 64803780 | 64803720 | ID=Msa0036350-mRNA-1:cds;Parent=Msa0036350-mRNA-1 |
| chr1_1 | CDS | 64803481 | 64803561 | 64803481 | ID=Msa0036350-mRNA-1:cds;Parent=Msa0036350-mRNA-1 |
| chr1_1 | CDS | 64803145 | 64803224 | 64803145 | ID=Msa0036350-mRNA-1:cds;Parent=Msa0036350-mRNA-1 |
| chr1_1 | CDS | 64802949 | 64803027 | 64802949 | ID=Msa0036350-mRNA-1:cds;Parent=Msa0036350-mRNA-1 |
| chr1_1 | three_prime_UTR | 64802405 | 64802948 | 64802405 | ID=Msa0036350-mRNA-1:three_prime_utr;Parent=Msa0036350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
