Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0568780 | O82515.1 | 100.000 | 359 | 0 | 0 | 1 | 359 | 1 | 359 | 0.0 | 741 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0568780 | sp|O82515|MTDH_MEDSA | 100.000 | 359 | 0 | 0 | 1 | 359 | 1 | 359 | 0.0 | 741 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0568780 | Q53X16 | 100.000 | 359 | 0 | 0 | 1 | 359 | 1 | 359 | 0.0 | 741 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0005500 | Msa0568780 | 0.805199 | 1.498344e-49 | -8.615850e-47 |
Msa0010150 | Msa0568780 | -0.811015 | 8.648885e-51 | -8.615850e-47 |
Msa0034590 | Msa0568780 | 0.802270 | 6.074455e-49 | -8.615850e-47 |
Msa0036350 | Msa0568780 | -0.815088 | 1.105762e-51 | -8.615850e-47 |
Msa0046680 | Msa0568780 | -0.819754 | 9.836511e-53 | -8.615850e-47 |
Msa0047630 | Msa0568780 | 0.806606 | 7.579742e-50 | -8.615850e-47 |
Msa0049670 | Msa0568780 | 0.806830 | 6.800189e-50 | -8.615850e-47 |
Msa0054110 | Msa0568780 | 0.818696 | 1.713447e-52 | -8.615850e-47 |
Msa0057270 | Msa0568780 | 0.811778 | 5.905862e-51 | -8.615850e-47 |
Msa0098380 | Msa0568780 | -0.809280 | 2.045737e-50 | -8.615850e-47 |
Msa0105140 | Msa0568780 | 0.801778 | 7.668993e-49 | -8.615850e-47 |
Msa0107830 | Msa0568780 | -0.809357 | 1.969741e-50 | -8.615850e-47 |
Msa0111000 | Msa0568780 | 0.810192 | 1.302342e-50 | -8.615850e-47 |
Msa0129290 | Msa0568780 | -0.812123 | 4.966718e-51 | -8.615850e-47 |
Msa0129820 | Msa0568780 | 0.803159 | 3.981790e-49 | -8.615850e-47 |
Msa0143640 | Msa0568780 | -0.806034 | 1.000744e-49 | -8.615850e-47 |
Msa0150910 | Msa0568780 | -0.805430 | 1.339936e-49 | -8.615850e-47 |
Msa0183960 | Msa0568780 | 0.804109 | 2.529159e-49 | -8.615850e-47 |
Msa0186400 | Msa0568780 | 0.801962 | 7.029437e-49 | -8.615850e-47 |
Msa0190470 | Msa0568780 | 0.820894 | 5.388565e-53 | -8.615850e-47 |
Msa0193950 | Msa0568780 | -0.810359 | 1.199090e-50 | -8.615850e-47 |
Msa0198140 | Msa0568780 | 0.818574 | 1.826120e-52 | -8.615850e-47 |
Msa0198220 | Msa0568780 | 0.819009 | 1.454192e-52 | -8.615850e-47 |
Msa0200090 | Msa0568780 | -0.809660 | 1.695087e-50 | -8.615850e-47 |
Msa0214800 | Msa0568780 | -0.809881 | 1.519807e-50 | -8.615850e-47 |
Msa0216150 | Msa0568780 | 0.808464 | 3.057299e-50 | -8.615850e-47 |
Msa0223500 | Msa0568780 | 0.831656 | 1.475155e-55 | -8.615850e-47 |
Msa0228360 | Msa0568780 | 0.804604 | 1.994592e-49 | -8.615850e-47 |
Msa0232660 | Msa0568780 | 0.816549 | 5.221922e-52 | -8.615850e-47 |
Msa0375930 | Msa0568780 | 0.858966 | 5.728379e-63 | -8.615850e-47 |
Msa0378320 | Msa0568780 | -0.824211 | 9.126224e-54 | -8.615850e-47 |
Msa0380110 | Msa0568780 | -0.808184 | 3.508980e-50 | -8.615850e-47 |
Msa0385280 | Msa0568780 | 0.810669 | 1.027636e-50 | -8.615850e-47 |
Msa0390160 | Msa0568780 | -0.806272 | 8.916423e-50 | -8.615850e-47 |
Msa0390200 | Msa0568780 | -0.814900 | 1.217110e-51 | -8.615850e-47 |
Msa0393910 | Msa0568780 | -0.806121 | 9.593631e-50 | -8.615850e-47 |
Msa0412580 | Msa0568780 | 0.811269 | 7.617726e-51 | -8.615850e-47 |
Msa0413590 | Msa0568780 | 0.826558 | 2.540317e-54 | -8.615850e-47 |
Msa0421080 | Msa0568780 | -0.814157 | 1.777342e-51 | -8.615850e-47 |
Msa0424570 | Msa0568780 | 0.858599 | 7.378159e-63 | -8.615850e-47 |
Msa0427660 | Msa0568780 | -0.823115 | 1.647431e-53 | -8.615850e-47 |
Msa0427890 | Msa0568780 | 0.801050 | 1.081088e-48 | -8.615850e-47 |
Msa0436610 | Msa0568780 | 0.803508 | 3.371927e-49 | -8.615850e-47 |
Msa0441750 | Msa0568780 | -0.814032 | 1.893710e-51 | -8.615850e-47 |
Msa0447160 | Msa0568780 | -0.803774 | 2.969726e-49 | -8.615850e-47 |
Msa0458690 | Msa0568780 | 0.819841 | 9.396850e-53 | -8.615850e-47 |
Msa0459930 | Msa0568780 | -0.801169 | 1.022059e-48 | -8.615850e-47 |
Msa0466850 | Msa0568780 | -0.819139 | 1.358272e-52 | -8.615850e-47 |
Msa0474120 | Msa0568780 | 0.805025 | 1.629224e-49 | -8.615850e-47 |
Msa0480540 | Msa0568780 | -0.825625 | 4.232641e-54 | -8.615850e-47 |
Msa0480550 | Msa0568780 | -0.826621 | 2.452989e-54 | -8.615850e-47 |
Msa0481440 | Msa0568780 | -0.820205 | 7.756052e-53 | -8.615850e-47 |
Msa0242720 | Msa0568780 | -0.855499 | 6.056507e-62 | -8.615850e-47 |
Msa0246140 | Msa0568780 | -0.810831 | 9.477734e-51 | -8.615850e-47 |
Msa0264580 | Msa0568780 | 0.837213 | 5.936234e-57 | -8.615850e-47 |
Msa0265650 | Msa0568780 | -0.805078 | 1.587652e-49 | -8.615850e-47 |
Msa0271700 | Msa0568780 | -0.823926 | 1.064705e-53 | -8.615850e-47 |
Msa0271720 | Msa0568780 | -0.831052 | 2.077445e-55 | -8.615850e-47 |
Msa0278340 | Msa0568780 | 0.820051 | 8.413732e-53 | -8.615850e-47 |
Msa0281000 | Msa0568780 | -0.817283 | 3.573237e-52 | -8.615850e-47 |
Msa0287480 | Msa0568780 | -0.800215 | 1.600121e-48 | -8.615850e-47 |
Msa0294200 | Msa0568780 | -0.857014 | 2.177208e-62 | -8.615850e-47 |
Msa0295030 | Msa0568780 | 0.835248 | 1.874166e-56 | -8.615850e-47 |
Msa0303650 | Msa0568780 | -0.818175 | 2.247808e-52 | -8.615850e-47 |
Msa0303900 | Msa0568780 | -0.823614 | 1.259935e-53 | -8.615850e-47 |
Msa0307630 | Msa0568780 | -0.803879 | 2.823497e-49 | -8.615850e-47 |
Msa0316230 | Msa0568780 | -0.800245 | 1.577518e-48 | -8.615850e-47 |
Msa0320130 | Msa0568780 | -0.825310 | 5.026023e-54 | -8.615850e-47 |
Msa0320140 | Msa0568780 | -0.809362 | 1.965045e-50 | -8.615850e-47 |
Msa0320170 | Msa0568780 | -0.822086 | 2.859471e-53 | -8.615850e-47 |
Msa0324810 | Msa0568780 | -0.813261 | 2.799265e-51 | -8.615850e-47 |
Msa0333770 | Msa0568780 | -0.816831 | 4.515778e-52 | -8.615850e-47 |
Msa0336550 | Msa0568780 | 0.804302 | 2.305975e-49 | -8.615850e-47 |
Msa0339970 | Msa0568780 | 0.835762 | 1.389505e-56 | -8.615850e-47 |
Msa0346170 | Msa0568780 | -0.806302 | 8.785918e-50 | -8.615850e-47 |
Msa0347320 | Msa0568780 | -0.820178 | 7.869295e-53 | -8.615850e-47 |
Msa0348370 | Msa0568780 | -0.808257 | 3.384428e-50 | -8.615850e-47 |
Msa0353010 | Msa0568780 | -0.810114 | 1.354069e-50 | -8.615850e-47 |
Msa0489370 | Msa0568780 | -0.804951 | 1.687785e-49 | -8.615850e-47 |
Msa0490060 | Msa0568780 | -0.811023 | 8.613547e-51 | -8.615850e-47 |
Msa0490100 | Msa0568780 | -0.806437 | 8.228968e-50 | -8.615850e-47 |
Msa0491980 | Msa0568780 | -0.807104 | 5.948795e-50 | -8.615850e-47 |
Msa0493870 | Msa0568780 | -0.823458 | 1.370107e-53 | -8.615850e-47 |
Msa0497860 | Msa0568780 | -0.807416 | 5.108854e-50 | -8.615850e-47 |
Msa0500440 | Msa0568780 | -0.805991 | 1.021844e-49 | -8.615850e-47 |
Msa0502940 | Msa0568780 | -0.802611 | 5.168287e-49 | -8.615850e-47 |
Msa0510870 | Msa0568780 | -0.803085 | 4.124539e-49 | -8.615850e-47 |
Msa0513670 | Msa0568780 | -0.823609 | 1.263040e-53 | -8.615850e-47 |
Msa0515130 | Msa0568780 | -0.825511 | 4.503461e-54 | -8.615850e-47 |
Msa0516000 | Msa0568780 | 0.856728 | 2.644040e-62 | -8.615850e-47 |
Msa0518490 | Msa0568780 | -0.813921 | 2.003875e-51 | -8.615850e-47 |
Msa0523140 | Msa0568780 | 0.804051 | 2.600269e-49 | -8.615850e-47 |
Msa0524730 | Msa0568780 | 0.810797 | 9.641536e-51 | -8.615850e-47 |
Msa0526520 | Msa0568780 | 0.814000 | 1.925350e-51 | -8.615850e-47 |
Msa0526840 | Msa0568780 | 0.822793 | 1.958234e-53 | -8.615850e-47 |
Msa0535570 | Msa0568780 | -0.825083 | 5.688388e-54 | -8.615850e-47 |
Msa0542330 | Msa0568780 | 0.801706 | 7.933627e-49 | -8.615850e-47 |
Msa0550980 | Msa0568780 | 0.807505 | 4.892801e-50 | -8.615850e-47 |
Msa0554770 | Msa0568780 | 0.817180 | 3.768556e-52 | -8.615850e-47 |
Msa0559440 | Msa0568780 | 0.829983 | 3.791985e-55 | -8.615850e-47 |
Msa0559640 | Msa0568780 | 0.816435 | 5.537376e-52 | -8.615850e-47 |
Msa0561110 | Msa0568780 | -0.809862 | 1.534177e-50 | -8.615850e-47 |
Msa0561830 | Msa0568780 | -0.800924 | 1.147015e-48 | -8.615850e-47 |
Msa0563230 | Msa0568780 | 0.802231 | 6.187926e-49 | -8.615850e-47 |
Msa0565180 | Msa0568780 | -0.806129 | 9.554937e-50 | -8.615850e-47 |
Msa0568050 | Msa0568780 | 0.806180 | 9.321406e-50 | -8.615850e-47 |
Msa0568780 | Msa0571900 | 0.807489 | 4.930523e-50 | -8.615850e-47 |
Msa0568780 | Msa0576510 | 0.822406 | 2.410261e-53 | -8.615850e-47 |
Msa0568780 | Msa0577960 | 0.804837 | 1.783234e-49 | -8.615850e-47 |
Msa0568780 | Msa0578890 | 0.816558 | 5.199338e-52 | -8.615850e-47 |
Msa0568780 | Msa0588040 | -0.811149 | 8.089892e-51 | -8.615850e-47 |
Msa0568780 | Msa0588730 | -0.826361 | 2.830327e-54 | -8.615850e-47 |
Msa0568780 | Msa0591490 | -0.818491 | 1.906794e-52 | -8.615850e-47 |
Msa0568780 | Msa0600500 | 0.818326 | 2.078216e-52 | -8.615850e-47 |
Msa0568780 | Msa0606340 | 0.808267 | 3.369061e-50 | -8.615850e-47 |
Msa0568780 | Msa0614960 | -0.814448 | 1.532734e-51 | -8.615850e-47 |
Msa0568780 | Msa0615070 | -0.800356 | 1.497554e-48 | -8.615850e-47 |
Msa0568780 | Msa0617470 | 0.802340 | 5.878228e-49 | -8.615850e-47 |
Msa0568780 | Msa0619030 | 0.870396 | 1.506736e-66 | -8.615850e-47 |
Msa0568780 | Msa0622800 | 0.801184 | 1.015088e-48 | -8.615850e-47 |
Msa0568780 | Msa0625550 | 0.806629 | 7.495860e-50 | -8.615850e-47 |
Msa0568780 | Msa0629030 | -0.802216 | 6.232153e-49 | -8.615850e-47 |
Msa0568780 | Msa0631700 | -0.807212 | 5.643802e-50 | -8.615850e-47 |
Msa0568780 | Msa0635070 | 0.803984 | 2.684967e-49 | -8.615850e-47 |
Msa0568780 | Msa0639410 | -0.801027 | 1.092971e-48 | -8.615850e-47 |
Msa0568780 | Msa0639630 | 0.811610 | 6.422230e-51 | -8.615850e-47 |
Msa0568780 | Msa0647300 | -0.804735 | 1.872530e-49 | -8.615850e-47 |
Msa0568780 | Msa0648840 | 0.803347 | 3.641482e-49 | -8.615850e-47 |
Msa0568780 | Msa0651340 | 0.815026 | 1.141345e-51 | -8.615850e-47 |
Msa0568780 | Msa0652590 | -0.822912 | 1.837896e-53 | -8.615850e-47 |
Msa0568780 | Msa0652600 | -0.814794 | 1.284879e-51 | -8.615850e-47 |
Msa0568780 | Msa0654400 | 0.827338 | 1.653090e-54 | -8.615850e-47 |
Msa0568780 | Msa0654500 | 0.821663 | 3.581296e-53 | -8.615850e-47 |
Msa0568780 | Msa0656570 | 0.803836 | 2.882348e-49 | -8.615850e-47 |
Msa0568780 | Msa0657340 | -0.821731 | 3.454838e-53 | -8.615850e-47 |
Msa0568780 | Msa0658920 | 0.837191 | 6.011569e-57 | -8.615850e-47 |
Msa0568780 | Msa0659100 | 0.935826 | 4.599939e-97 | -8.615850e-47 |
Msa0568780 | Msa0666580 | -0.811337 | 7.364770e-51 | -8.615850e-47 |
Msa0568780 | Msa0675590 | -0.831295 | 1.809932e-55 | -8.615850e-47 |
Msa0568780 | Msa0685390 | 0.824462 | 7.967577e-54 | -8.615850e-47 |
Msa0568780 | Msa0686830 | -0.810567 | 1.081029e-50 | -8.615850e-47 |
Msa0568780 | Msa0689840 | -0.815170 | 1.060434e-51 | -8.615850e-47 |
Msa0568780 | Msa0690100 | 0.806501 | 7.978690e-50 | -8.615850e-47 |
Msa0568780 | Msa0693560 | 0.834675 | 2.613355e-56 | -8.615850e-47 |
Msa0568780 | Msa0699170 | -0.817587 | 3.052806e-52 | -8.615850e-47 |
Msa0568780 | Msa0700250 | 0.801609 | 8.305490e-49 | -8.615850e-47 |
Msa0568780 | Msa0701430 | -0.832121 | 1.132737e-55 | -8.615850e-47 |
Msa0568780 | Msa0704350 | 0.834607 | 2.718304e-56 | -8.615850e-47 |
Msa0568780 | Msa0704430 | 0.838014 | 3.698044e-57 | -8.615850e-47 |
Msa0568780 | Msa0706700 | 0.808182 | 3.511035e-50 | -8.615850e-47 |
Msa0568780 | Msa0707870 | 0.832457 | 9.349217e-56 | -8.615850e-47 |
Msa0568780 | Msa0716620 | -0.815486 | 9.020989e-52 | -8.615850e-47 |
Msa0568780 | Msa0720870 | -0.806782 | 6.959332e-50 | -8.615850e-47 |
Msa0568780 | Msa0728210 | -0.800066 | 1.715861e-48 | -8.615850e-47 |
Msa0568780 | Msa0728230 | -0.815670 | 8.209668e-52 | -8.615850e-47 |
Msa0568780 | Msa0728520 | -0.800493 | 1.404347e-48 | -8.615850e-47 |
Msa0568780 | Msa0728570 | -0.815665 | 8.227011e-52 | -8.615850e-47 |
Msa0568780 | Msa0729780 | 0.806119 | 9.601449e-50 | -8.615850e-47 |
Msa0568780 | Msa0731580 | -0.825685 | 4.097038e-54 | -8.615850e-47 |
Msa0568780 | Msa0734690 | -0.827125 | 1.858917e-54 | -8.615850e-47 |
Msa0568780 | Msa0736560 | -0.822800 | 1.951835e-53 | -8.615850e-47 |
Msa0568780 | Msa0738680 | -0.826188 | 3.111274e-54 | -8.615850e-47 |
Msa0568780 | Msa0743370 | -0.845027 | 5.244574e-59 | -8.615850e-47 |
Msa0568780 | Msa0744550 | -0.829531 | 4.887210e-55 | -8.615850e-47 |
Msa0568780 | Msa0744560 | -0.827828 | 1.261032e-54 | -8.615850e-47 |
Msa0568780 | Msa0744710 | -0.823504 | 1.336456e-53 | -8.615850e-47 |
Msa0568780 | Msa0747660 | 0.806563 | 7.740927e-50 | -8.615850e-47 |
Msa0568780 | Msa0750490 | 0.807711 | 4.422794e-50 | -8.615850e-47 |
Msa0568780 | Msa0750830 | -0.821417 | 4.083101e-53 | -8.615850e-47 |
Msa0568780 | Msa0761420 | -0.807476 | 4.962002e-50 | -8.615850e-47 |
Msa0568780 | Msa0766170 | -0.805857 | 1.089922e-49 | -8.615850e-47 |
Msa0568780 | Msa0771810 | -0.802516 | 5.407288e-49 | -8.615850e-47 |
Msa0568780 | Msa0772350 | -0.814132 | 1.800244e-51 | -8.615850e-47 |
Msa0568780 | Msa0776540 | -0.804835 | 1.785137e-49 | -8.615850e-47 |
Msa0568780 | Msa0786600 | 0.833155 | 6.273957e-56 | -8.615850e-47 |
Msa0568780 | Msa0789410 | -0.804672 | 1.930875e-49 | -8.615850e-47 |
Msa0568780 | Msa0792410 | -0.803799 | 2.933566e-49 | -8.615850e-47 |
Msa0568780 | Msa0795320 | -0.801882 | 7.300043e-49 | -8.615850e-47 |
Msa0568780 | Msa0809920 | -0.817588 | 3.051419e-52 | -8.615850e-47 |
Msa0568780 | Msa0812050 | -0.812312 | 4.516897e-51 | -8.615850e-47 |
Msa0568780 | Msa0813710 | -0.804721 | 1.885480e-49 | -8.615850e-47 |
Msa0568780 | Msa0814660 | -0.824794 | 6.654293e-54 | -8.615850e-47 |
Msa0568780 | Msa0819150 | -0.819274 | 1.265991e-52 | -8.615850e-47 |
Msa0568780 | Msa0822680 | 0.823666 | 1.225060e-53 | -8.615850e-47 |
Msa0568780 | Msa0826240 | -0.835277 | 1.843142e-56 | -8.615850e-47 |
Msa0568780 | Msa0826360 | -0.824254 | 8.918114e-54 | -8.615850e-47 |
Msa0568780 | Msa0826370 | -0.812648 | 3.814726e-51 | -8.615850e-47 |
Msa0568780 | Msa0829250 | 0.807061 | 6.074459e-50 | -8.615850e-47 |
Msa0568780 | Msa0829770 | 0.820785 | 5.710303e-53 | -8.615850e-47 |
Msa0568780 | Msa0837550 | -0.818253 | 2.158221e-52 | -8.615850e-47 |
Msa0568780 | Msa0850480 | -0.809822 | 1.564452e-50 | -8.615850e-47 |
Msa0568780 | Msa0854160 | -0.808383 | 3.182416e-50 | -8.615850e-47 |
Msa0568780 | Msa0855260 | -0.826314 | 2.904012e-54 | -8.615850e-47 |
Msa0568780 | Msa0856080 | -0.823074 | 1.684933e-53 | -8.615850e-47 |
Msa0568780 | Msa0865810 | -0.815680 | 8.166823e-52 | -8.615850e-47 |
Msa0568780 | Msa0865820 | -0.813840 | 2.088030e-51 | -8.615850e-47 |
Msa0568780 | Msa0865830 | -0.836197 | 1.077876e-56 | -8.615850e-47 |
Msa0568780 | Msa0869320 | 0.807813 | 4.207478e-50 | -8.615850e-47 |
Msa0568780 | Msa0874750 | -0.825878 | 3.686637e-54 | -8.615850e-47 |
Msa0568780 | Msa0896920 | -0.825161 | 5.450529e-54 | -8.615850e-47 |
Msa0568780 | Msa0934290 | 0.825146 | 5.496115e-54 | -8.615850e-47 |
Msa0568780 | Msa0940780 | -0.807910 | 4.013095e-50 | -8.615850e-47 |
Msa0568780 | Msa0945330 | -0.815263 | 1.011188e-51 | -8.615850e-47 |
Msa0568780 | Msa0956600 | 0.838244 | 3.226346e-57 | -8.615850e-47 |
Msa0568780 | Msa0967250 | 0.801562 | 8.491535e-49 | -8.615850e-47 |
Msa0568780 | Msa0971780 | 0.833164 | 6.242659e-56 | -8.615850e-47 |
Msa0568780 | Msa0976400 | -0.843505 | 1.344321e-58 | -8.615850e-47 |
Msa0568780 | Msa1003730 | -0.813769 | 2.164464e-51 | -8.615850e-47 |
Msa0568780 | Msa1003920 | -0.818090 | 2.349649e-52 | -8.615850e-47 |
Msa0568780 | Msa1011140 | 0.842609 | 2.328683e-58 | -8.615850e-47 |
Msa0568780 | Msa1016450 | 0.813483 | 2.501917e-51 | -8.615850e-47 |
Msa0568780 | Msa1022490 | -0.819419 | 1.173343e-52 | -8.615850e-47 |
Msa0568780 | Msa1022510 | -0.829319 | 5.500432e-55 | -8.615850e-47 |
Msa0568780 | Msa1029190 | 0.818128 | 2.303400e-52 | -8.615850e-47 |
Msa0568780 | Msa1029200 | 0.837589 | 4.754681e-57 | -8.615850e-47 |
Msa0568780 | Msa1030210 | -0.817350 | 3.450801e-52 | -8.615850e-47 |
Msa0568780 | Msa1035050 | -0.844368 | 7.895809e-59 | -8.615850e-47 |
Msa0568780 | Msa1038570 | 0.828006 | 1.142686e-54 | -8.615850e-47 |
Msa0568780 | Msa1038610 | 0.824394 | 8.267986e-54 | -8.615850e-47 |
Msa0568780 | Msa1039150 | 0.821546 | 3.811619e-53 | -8.615850e-47 |
Msa0568780 | Msa1048390 | -0.807384 | 5.189490e-50 | -8.615850e-47 |
Msa0568780 | Msa1055710 | 0.804640 | 1.960592e-49 | -8.615850e-47 |
Msa0568780 | Msa1057940 | 0.815554 | 8.711237e-52 | -8.615850e-47 |
Msa0568780 | Msa1061840 | -0.810316 | 1.224692e-50 | -8.615850e-47 |
Msa0568780 | Msa1063210 | -0.808480 | 3.033310e-50 | -8.615850e-47 |
Msa0568780 | Msa1065090 | 0.834692 | 2.587243e-56 | -8.615850e-47 |
Msa0568780 | Msa1065620 | 0.837379 | 5.380552e-57 | -8.615850e-47 |
Msa0568780 | Msa1069250 | -0.812164 | 4.865142e-51 | -8.615850e-47 |
Msa0568780 | Msa1075090 | -0.856833 | 2.462934e-62 | -8.615850e-47 |
Msa0568780 | Msa1077970 | -0.823373 | 1.434125e-53 | -8.615850e-47 |
Msa0568780 | Msa1078590 | 0.817352 | 3.447413e-52 | -8.615850e-47 |
Msa0568780 | Msa1078760 | 0.807979 | 3.878498e-50 | -8.615850e-47 |
Msa0568780 | Msa1083660 | 0.825084 | 5.683784e-54 | -8.615850e-47 |
Msa0568780 | Msa1087380 | -0.809437 | 1.893381e-50 | -8.615850e-47 |
Msa0568780 | Msa1095590 | -0.813869 | 2.057750e-51 | -8.615850e-47 |
Msa0568780 | Msa1100030 | -0.806240 | 9.054443e-50 | -8.615850e-47 |
Msa0568780 | Msa1100330 | -0.828288 | 9.772857e-55 | -8.615850e-47 |
Msa0568780 | Msa1102410 | 0.823768 | 1.159483e-53 | -8.615850e-47 |
Msa0568780 | Msa1104020 | 0.844772 | 6.145228e-59 | -8.615850e-47 |
Msa0568780 | Msa1106680 | -0.816984 | 4.170966e-52 | -8.615850e-47 |
Msa0568780 | Msa1107220 | -0.803046 | 4.201837e-49 | -8.615850e-47 |
Msa0568780 | Msa1107250 | -0.800949 | 1.133651e-48 | -8.615850e-47 |
Msa0568780 | Msa1110900 | -0.838751 | 2.387370e-57 | -8.615850e-47 |
Msa0568780 | Msa1111190 | 0.822701 | 2.057145e-53 | -8.615850e-47 |
Msa0568780 | Msa1112210 | 0.803229 | 3.851774e-49 | -8.615850e-47 |
Msa0568780 | Msa1115980 | -0.826546 | 2.556733e-54 | -8.615850e-47 |
Msa0568780 | Msa1117770 | 0.806188 | 9.284569e-50 | -8.615850e-47 |
Msa0568780 | Msa1119370 | 0.820570 | 6.396143e-53 | -8.615850e-47 |
Msa0568780 | Msa1123440 | 0.803312 | 3.702159e-49 | -8.615850e-47 |
Msa0568780 | Msa1124220 | -0.817092 | 3.945375e-52 | -8.615850e-47 |
Msa0568780 | Msa1129120 | 0.813764 | 2.169837e-51 | -8.615850e-47 |
Msa0568780 | Msa1129130 | 0.803811 | 2.917592e-49 | -8.615850e-47 |
Msa0568780 | Msa1129160 | 0.839402 | 1.619483e-57 | -8.615850e-47 |
Msa0568780 | Msa1129470 | 0.815209 | 1.039501e-51 | -8.615850e-47 |
Msa0568780 | Msa1136630 | -0.838685 | 2.483283e-57 | -8.615850e-47 |
Msa0568780 | Msa1137240 | 0.800033 | 1.742144e-48 | -8.615850e-47 |
Msa0568780 | Msa1142390 | -0.839165 | 1.865147e-57 | -8.615850e-47 |
Msa0568780 | Msa1144380 | 0.800324 | 1.520033e-48 | -8.615850e-47 |
Msa0568780 | Msa1147600 | 0.826962 | 2.033645e-54 | -8.615850e-47 |
Msa0568780 | Msa1154570 | -0.802025 | 6.823051e-49 | -8.615850e-47 |
Msa0568780 | Msa1154770 | 0.831562 | 1.556231e-55 | -8.615850e-47 |
Msa0568780 | Msa1162430 | -0.843298 | 1.526990e-58 | -8.615850e-47 |
Msa0568780 | Msa1166920 | 0.811204 | 7.870875e-51 | -8.615850e-47 |
Msa0568780 | Msa1169590 | 0.821964 | 3.050592e-53 | -8.615850e-47 |
Msa0568780 | Msa1172070 | 0.805719 | 1.165593e-49 | -8.615850e-47 |
Msa0568780 | Msa1174280 | -0.840981 | 6.268030e-58 | -8.615850e-47 |
Msa0568780 | Msa1191530 | 0.801479 | 8.833212e-49 | -8.615850e-47 |
Msa0568780 | Msa1199540 | 0.815102 | 1.098102e-51 | -8.615850e-47 |
Msa0568780 | Msa1202110 | -0.836137 | 1.115874e-56 | -8.615850e-47 |
Msa0568780 | Msa1211130 | -0.810401 | 1.173843e-50 | -8.615850e-47 |
Msa0568780 | Msa1211610 | -0.813433 | 2.565910e-51 | -8.615850e-47 |
Msa0568780 | Msa1219530 | 0.835364 | 1.752045e-56 | -8.615850e-47 |
Msa0568780 | Msa1221520 | -0.803015 | 4.265426e-49 | -8.615850e-47 |
Msa0568780 | Msa1223560 | -0.828169 | 1.043949e-54 | -8.615850e-47 |
Msa0568780 | Msa1239940 | -0.824012 | 1.016176e-53 | -8.615850e-47 |
Msa0568780 | Msa1254870 | -0.831513 | 1.599929e-55 | -8.615850e-47 |
Msa0568780 | Msa1263500 | -0.813330 | 2.703225e-51 | -8.615850e-47 |
Msa0568780 | Msa1264940 | -0.810567 | 1.081043e-50 | -8.615850e-47 |
Msa0568780 | Msa1269200 | -0.800045 | 1.732925e-48 | -8.615850e-47 |
Msa0568780 | Msa1279200 | 0.800904 | 1.157877e-48 | -8.615850e-47 |
Msa0568780 | Msa1281300 | -0.844781 | 6.110373e-59 | -8.615850e-47 |
Msa0568780 | Msa1299480 | -0.806831 | 6.794816e-50 | -8.615850e-47 |
Msa0568780 | Msa1303150 | -0.815992 | 6.958463e-52 | -8.615850e-47 |
Msa0568780 | Msa1309040 | -0.850382 | 1.760215e-60 | -8.615850e-47 |
Msa0568780 | Msa1316960 | -0.815251 | 1.017319e-51 | -8.615850e-47 |
Msa0568780 | Msa1317740 | -0.804339 | 2.265625e-49 | -8.615850e-47 |
Msa0568780 | Msa1320160 | -0.820179 | 7.861854e-53 | -8.615850e-47 |
Msa0568780 | Msa1328430 | -0.831218 | 1.890964e-55 | -8.615850e-47 |
Msa0568780 | Msa1328680 | 0.803304 | 3.716190e-49 | -8.615850e-47 |
Msa0568780 | Msa1332340 | 0.826394 | 2.778753e-54 | -8.615850e-47 |
Msa0568780 | Msa1333220 | 0.824418 | 8.160133e-54 | -8.615850e-47 |
Msa0568780 | Msa1334000 | -0.807163 | 5.779727e-50 | -8.615850e-47 |
Msa0568780 | Msa1344870 | 0.802479 | 5.502415e-49 | -8.615850e-47 |
Msa0568780 | Msa1349410 | 0.819975 | 8.757154e-53 | -8.615850e-47 |
Msa0568780 | Msa1357840 | -0.812227 | 4.714045e-51 | -8.615850e-47 |
Msa0568780 | Msa1363310 | 0.814850 | 1.248899e-51 | -8.615850e-47 |
Msa0568780 | Msa1371260 | 0.801212 | 1.001536e-48 | -8.615850e-47 |
Msa0568780 | Msa1374210 | 0.805622 | 1.221535e-49 | -8.615850e-47 |
Msa0568780 | Msa1375640 | -0.803571 | 3.271041e-49 | -8.615850e-47 |
Msa0568780 | Msa1381300 | 0.827463 | 1.542811e-54 | -8.615850e-47 |
Msa0568780 | Msa1382740 | -0.814005 | 1.920113e-51 | -8.615850e-47 |
Msa0568780 | Msa1386180 | 0.817361 | 3.431965e-52 | -8.615850e-47 |
Msa0568780 | Msa1386580 | 0.815862 | 7.436209e-52 | -8.615850e-47 |
Msa0568780 | Msa1387610 | -0.826584 | 2.503285e-54 | -8.615850e-47 |
Msa0568780 | Msa1388720 | 0.810156 | 1.326175e-50 | -8.615850e-47 |
Msa0568780 | Msa1395360 | 0.832717 | 8.060291e-56 | -8.615850e-47 |
Msa0568780 | Msa1398120 | -0.812839 | 3.463337e-51 | -8.615850e-47 |
Msa0568780 | Msa1407040 | -0.801267 | 9.761034e-49 | -8.615850e-47 |
Msa0568780 | Msa1409360 | 0.834337 | 3.176781e-56 | -8.615850e-47 |
Msa0568780 | Msa1410480 | 0.808656 | 2.782679e-50 | -8.615850e-47 |
Msa0568780 | Msa1410500 | 0.801675 | 8.052522e-49 | -8.615850e-47 |
Msa0568780 | Msa1414790 | 0.806041 | 9.971062e-50 | -8.615850e-47 |
Msa0568780 | Msa1429190 | -0.812603 | 3.901870e-51 | -8.615850e-47 |
Msa0568780 | Msa1432730 | 0.818477 | 1.920304e-52 | -8.615850e-47 |
Msa0568780 | Msa1438410 | 0.808331 | 3.264110e-50 | -8.615850e-47 |
Msa0568780 | Msa1449470 | -0.825913 | 3.616414e-54 | -8.615850e-47 |
Msa0568780 | Msa1457270 | 0.802435 | 5.618184e-49 | -8.615850e-47 |
Msa0568780 | Msa1459130 | 0.800298 | 1.538995e-48 | -8.615850e-47 |
Msa0568780 | Msa1459920 | -0.838063 | 3.592852e-57 | -8.615850e-47 |
Msa0568780 | Msa1459930 | -0.815855 | 7.464743e-52 | -8.615850e-47 |
Msa0568780 | Msa1462610 | -0.803706 | 3.066707e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0568780 | MtrunA17_Chr8g0383721 | 98.050 | 359 | 7 | 0 | 1 | 359 | 1 | 359 | 0.0 | 726 |
Msa0568780 | MtrunA17_Chr5g0411821 | 66.106 | 357 | 120 | 1 | 1 | 356 | 1 | 357 | 6.62e-174 | 489 |
Msa0568780 | MtrunA17_Chr4g0064291 | 65.266 | 357 | 123 | 1 | 1 | 356 | 1 | 357 | 1.36e-171 | 482 |
Msa0568780 | MtrunA17_Chr5g0411801 | 66.017 | 359 | 121 | 1 | 1 | 358 | 33 | 391 | 7.82e-171 | 481 |
Msa0568780 | MtrunA17_Chr5g0411841 | 64.426 | 357 | 126 | 1 | 1 | 356 | 1 | 357 | 5.94e-168 | 473 |
Msa0568780 | MtrunA17_Chr5g0411931 | 63.510 | 359 | 130 | 1 | 1 | 358 | 1 | 359 | 3.24e-167 | 471 |
Msa0568780 | MtrunA17_Chr5g0411901 | 63.143 | 350 | 128 | 1 | 8 | 356 | 9 | 358 | 2.99e-166 | 468 |
Msa0568780 | MtrunA17_Chr5g0411911 | 63.897 | 349 | 125 | 1 | 9 | 356 | 11 | 359 | 1.05e-164 | 464 |
Msa0568780 | MtrunA17_Chr5g0411811 | 63.866 | 357 | 128 | 1 | 1 | 356 | 1 | 357 | 2.29e-162 | 458 |
Msa0568780 | MtrunA17_Chr5g0411881 | 62.571 | 350 | 130 | 1 | 8 | 356 | 9 | 358 | 2.80e-162 | 458 |
Msa0568780 | MtrunA17_Chr8g0367151 | 65.181 | 359 | 124 | 1 | 1 | 358 | 1 | 359 | 1.15e-161 | 456 |
Msa0568780 | MtrunA17_Chr5g0411871 | 59.429 | 350 | 141 | 1 | 8 | 356 | 23 | 372 | 1.40e-158 | 449 |
Msa0568780 | MtrunA17_Chr1g0157021 | 60.350 | 343 | 134 | 2 | 15 | 355 | 14 | 356 | 7.19e-143 | 409 |
Msa0568780 | MtrunA17_Chr5g0411941 | 58.757 | 354 | 143 | 2 | 4 | 356 | 6 | 357 | 4.21e-140 | 402 |
Msa0568780 | MtrunA17_Chr5g0411791 | 63.609 | 327 | 118 | 1 | 33 | 358 | 7 | 333 | 4.83e-138 | 395 |
Msa0568780 | MtrunA17_Chr2g0279791 | 55.072 | 345 | 152 | 3 | 14 | 356 | 62 | 405 | 2.86e-120 | 353 |
Msa0568780 | MtrunA17_Chr1g0208031 | 50.292 | 342 | 169 | 1 | 15 | 355 | 13 | 354 | 2.33e-116 | 341 |
Msa0568780 | MtrunA17_Chr2g0279801 | 52.582 | 213 | 88 | 3 | 145 | 356 | 13 | 213 | 1.24e-55 | 181 |
Msa0568780 | MtrunA17_Chr5g0411851 | 67.606 | 71 | 23 | 0 | 1 | 71 | 1 | 71 | 2.86e-30 | 112 |
Msa0568780 | MtrunA17_Chr8g0385221 | 28.622 | 283 | 169 | 11 | 24 | 278 | 67 | 344 | 2.41e-24 | 103 |
Msa0568780 | MtrunA17_Chr5g0411861 | 61.905 | 63 | 24 | 0 | 296 | 358 | 1 | 63 | 9.71e-24 | 92.8 |
Msa0568780 | MtrunA17_Chr4g0021211 | 27.566 | 341 | 206 | 13 | 39 | 351 | 61 | 388 | 1.59e-17 | 83.2 |
Msa0568780 | MtrunA17_Chr6g0474141 | 23.711 | 291 | 198 | 8 | 15 | 292 | 19 | 298 | 1.53e-15 | 77.0 |
Msa0568780 | MtrunA17_Chr7g0262421 | 25.664 | 339 | 211 | 12 | 38 | 341 | 37 | 369 | 8.58e-15 | 75.1 |
Msa0568780 | MtrunA17_Chr1g0183131 | 25.074 | 339 | 211 | 12 | 39 | 341 | 36 | 367 | 1.15e-13 | 71.6 |
Msa0568780 | MtrunA17_Chr3g0132351 | 26.183 | 317 | 173 | 12 | 39 | 311 | 44 | 343 | 1.37e-12 | 68.2 |
Msa0568780 | MtrunA17_Chr3g0118441 | 25.839 | 298 | 186 | 13 | 39 | 306 | 41 | 333 | 1.95e-12 | 67.8 |
Msa0568780 | MtrunA17_Chr8g0365421 | 27.083 | 240 | 139 | 7 | 37 | 265 | 103 | 317 | 7.66e-12 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0568780 | AT4G39330.1 | 76.536 | 358 | 83 | 1 | 1 | 357 | 1 | 358 | 0.0 | 558 |
Msa0568780 | AT2G21730.1 | 72.126 | 348 | 94 | 2 | 12 | 356 | 6 | 353 | 0.0 | 517 |
Msa0568780 | AT2G21890.1 | 72.334 | 347 | 94 | 2 | 12 | 356 | 6 | 352 | 0.0 | 517 |
Msa0568780 | AT4G39330.2 | 74.751 | 301 | 75 | 1 | 1 | 300 | 1 | 301 | 9.69e-162 | 455 |
Msa0568780 | AT4G37970.1 | 60.393 | 356 | 140 | 1 | 4 | 358 | 5 | 360 | 1.07e-159 | 452 |
Msa0568780 | AT4G37990.1 | 66.189 | 349 | 117 | 1 | 9 | 356 | 5 | 353 | 4.47e-157 | 445 |
Msa0568780 | AT4G37980.1 | 64.756 | 349 | 122 | 1 | 9 | 356 | 5 | 353 | 1.83e-155 | 441 |
Msa0568780 | AT4G37970.4 | 59.864 | 294 | 117 | 1 | 4 | 296 | 5 | 298 | 5.68e-126 | 364 |
Msa0568780 | AT1G72680.1 | 52.924 | 342 | 159 | 2 | 16 | 356 | 14 | 354 | 1.42e-119 | 350 |
Msa0568780 | AT4G37980.2 | 62.414 | 290 | 108 | 1 | 9 | 297 | 5 | 294 | 2.38e-119 | 347 |
Msa0568780 | AT3G19450.1 | 50.435 | 345 | 170 | 1 | 12 | 355 | 10 | 354 | 5.78e-113 | 333 |
Msa0568780 | AT4G34230.1 | 50.716 | 349 | 171 | 1 | 8 | 355 | 5 | 353 | 3.73e-108 | 321 |
Msa0568780 | AT4G34230.2 | 50.430 | 349 | 172 | 1 | 8 | 355 | 5 | 353 | 2.79e-107 | 318 |
Msa0568780 | AT4G37970.3 | 59.336 | 241 | 97 | 1 | 4 | 243 | 5 | 245 | 1.81e-100 | 298 |
Msa0568780 | AT4G37970.2 | 59.833 | 239 | 95 | 1 | 4 | 241 | 5 | 243 | 4.47e-100 | 296 |
Msa0568780 | AT5G63620.2 | 26.027 | 365 | 227 | 14 | 24 | 352 | 69 | 426 | 2.19e-25 | 106 |
Msa0568780 | AT5G63620.1 | 26.027 | 365 | 227 | 14 | 24 | 352 | 69 | 426 | 3.90e-25 | 105 |
Msa0568780 | AT5G63620.3 | 29.825 | 228 | 132 | 8 | 24 | 228 | 69 | 291 | 4.46e-23 | 98.6 |
Msa0568780 | AT5G43940.1 | 26.000 | 350 | 217 | 11 | 39 | 353 | 36 | 378 | 3.51e-19 | 88.2 |
Msa0568780 | AT5G43940.2 | 25.926 | 351 | 218 | 11 | 39 | 354 | 48 | 391 | 3.89e-19 | 88.2 |
Msa0568780 | AT1G22430.2 | 26.979 | 341 | 205 | 13 | 39 | 341 | 42 | 376 | 1.52e-18 | 86.7 |
Msa0568780 | AT1G22430.1 | 26.979 | 341 | 205 | 13 | 39 | 341 | 42 | 376 | 1.52e-18 | 86.7 |
Msa0568780 | AT5G51970.1 | 26.838 | 272 | 173 | 8 | 36 | 292 | 40 | 300 | 7.30e-18 | 84.3 |
Msa0568780 | AT5G51970.2 | 26.838 | 272 | 173 | 8 | 36 | 292 | 40 | 300 | 7.30e-18 | 84.3 |
Msa0568780 | AT4G22110.2 | 26.549 | 339 | 205 | 13 | 39 | 339 | 43 | 375 | 9.15e-17 | 81.3 |
Msa0568780 | AT4G22110.1 | 26.549 | 339 | 205 | 13 | 39 | 339 | 43 | 375 | 9.15e-17 | 81.3 |
Msa0568780 | AT1G64710.2 | 24.412 | 340 | 215 | 13 | 39 | 341 | 13 | 347 | 6.38e-16 | 78.6 |
Msa0568780 | AT1G64710.1 | 24.412 | 340 | 215 | 13 | 39 | 341 | 36 | 370 | 7.50e-16 | 78.6 |
Msa0568780 | AT5G42250.1 | 23.512 | 336 | 219 | 10 | 39 | 339 | 45 | 377 | 2.58e-14 | 73.9 |
Msa0568780 | AT1G22430.3 | 27.723 | 202 | 120 | 5 | 39 | 218 | 42 | 239 | 2.71e-14 | 73.2 |
Msa0568780 | AT1G22430.4 | 27.778 | 216 | 129 | 6 | 39 | 232 | 42 | 252 | 3.61e-14 | 72.8 |
Msa0568780 | AT1G22430.5 | 27.778 | 216 | 129 | 6 | 39 | 232 | 42 | 252 | 3.61e-14 | 72.8 |
Msa0568780 | AT1G22440.1 | 25.497 | 302 | 183 | 11 | 39 | 306 | 40 | 333 | 1.40e-13 | 71.6 |
Msa0568780 | AT4G22110.3 | 27.528 | 178 | 104 | 4 | 39 | 195 | 43 | 216 | 7.71e-13 | 68.6 |
Msa0568780 | AT1G77120.1 | 21.829 | 339 | 226 | 10 | 39 | 343 | 36 | 369 | 3.80e-11 | 64.3 |
Find 117 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCACTTACCCTGTTGTTCC+TGG | 0.225700 | 4_1:-70417350 | Msa0568780:CDS |
ATCAAATTCGGTAAAGCATT+TGG | 0.245686 | 4_1:-70415465 | Msa0568780:CDS |
ACCTATAACTCTCCTTATAA+AGG | 0.251163 | 4_1:-70415693 | Msa0568780:CDS |
ATGGCCTCAGTTTCCTTGTT+TGG | 0.279886 | 4_1:+70415414 | None:intergenic |
TTGAGTGGGAGTTCGGTTTC+GGG | 0.283001 | 4_1:+70417614 | None:intergenic |
TTTGAGTGGGAGTTCGGTTT+CGG | 0.285055 | 4_1:+70417613 | None:intergenic |
TCTGTCTTTCCATTAGTTGC+AGG | 0.301516 | 4_1:-70414700 | Msa0568780:intron |
GTGGCAGGGCTTGGTGGGTT+AGG | 0.307365 | 4_1:-70415498 | Msa0568780:CDS |
CTAAAAGCGTGTTTGGTCTT+AGG | 0.313817 | 4_1:-70414066 | Msa0568780:three_prime_UTR |
TGAGAATTGCAATCAAGATT+TGG | 0.319987 | 4_1:-70415742 | Msa0568780:CDS |
GAACTCCCACTCAAAGCTTT+TGG | 0.323434 | 4_1:-70417605 | Msa0568780:CDS |
TAGGTTCGTGTCCCTTTATA+AGG | 0.354122 | 4_1:+70415681 | None:intergenic |
TTGGGAGTGGCAGGGCTTGG+TGG | 0.355141 | 4_1:-70415504 | Msa0568780:CDS |
ATTGTCGTCTAATTTATTGT+AGG | 0.359090 | 4_1:-70414138 | Msa0568780:three_prime_UTR |
TTATAGGTAAATACAGGTTT+AGG | 0.360036 | 4_1:+70415708 | None:intergenic |
CCCTTTATAAGGAGAGTTAT+AGG | 0.360288 | 4_1:+70415692 | None:intergenic |
GTAGGCCAAGCAGTGGCATC+AGG | 0.367409 | 4_1:+70414779 | None:intergenic |
GATGGTTTACCTGCAACTAA+TGG | 0.378875 | 4_1:+70414691 | None:intergenic |
TATAGCCCGATGAAGTATTA+TGG | 0.379807 | 4_1:-70415549 | Msa0568780:CDS |
GCCACTCCCAAATGTTTGCC+TGG | 0.380570 | 4_1:+70415516 | None:intergenic |
CATACATACCCAGGAACAAC+AGG | 0.380990 | 4_1:+70417341 | None:intergenic |
CCTATAACTCTCCTTATAAA+GGG | 0.390671 | 4_1:-70415692 | Msa0568780:CDS |
GGCAAACATTTGGGAGTGGC+AGG | 0.391166 | 4_1:-70415513 | Msa0568780:CDS |
ACAAAGCTGATGTGAAATAT+CGG | 0.393376 | 4_1:-70414313 | Msa0568780:CDS |
AGTGTATTTATTGACTTATA+CGG | 0.395554 | 4_1:+70417713 | None:intergenic |
CTCCCTTTCATTTCTCTCGA+AGG | 0.396574 | 4_1:-70417550 | Msa0568780:intron |
ACTGAAGTTGAATGGGAAAC+TGG | 0.399835 | 4_1:-70414758 | Msa0568780:CDS |
GACTGAACCAGGCAAACATT+TGG | 0.404496 | 4_1:-70415523 | Msa0568780:CDS |
TCAAATTCGGTAAAGCATTT+GGG | 0.405047 | 4_1:-70415464 | Msa0568780:CDS |
GTCTAATTTATTGTAGGCTC+AGG | 0.408055 | 4_1:-70414132 | Msa0568780:three_prime_UTR |
CCACTTACCCTGTTGTTCCT+GGG | 0.410049 | 4_1:-70417349 | Msa0568780:intron |
ACTGCAGGACGGAAGCTTAT+CGG | 0.411894 | 4_1:-70414461 | Msa0568780:intron |
CATTTGGGAGTGGCAGGGCT+TGG | 0.412676 | 4_1:-70415507 | Msa0568780:CDS |
GGCCATGTTGCAATCAAATT+CGG | 0.413822 | 4_1:-70415477 | Msa0568780:CDS |
GGAGAGTTATAGGTAAATAC+AGG | 0.414003 | 4_1:+70415702 | None:intergenic |
GTGCTCCACTTCTGTGTGCC+GGG | 0.418161 | 4_1:-70415581 | Msa0568780:CDS |
AAAAGCTTTGAGTGGGAGTT+CGG | 0.429852 | 4_1:+70417607 | None:intergenic |
GGTGCTCCACTTCTGTGTGC+CGG | 0.433744 | 4_1:-70415582 | Msa0568780:CDS |
CATTCCCTGATGCCACTGCT+TGG | 0.437997 | 4_1:-70414784 | Msa0568780:CDS |
ACTGAACCAGGCAAACATTT+GGG | 0.439930 | 4_1:-70415522 | Msa0568780:CDS |
TGGGCTGCTAGAGACACTTC+TGG | 0.465043 | 4_1:-70417581 | Msa0568780:CDS |
TGTCTGACTAAAAGCGTGTT+TGG | 0.474906 | 4_1:-70414073 | Msa0568780:three_prime_UTR |
ACACACTCTCAAGAACGATT+GGG | 0.475053 | 4_1:-70417378 | Msa0568780:CDS |
AAGTGGAGCACCAGCGTCAA+GGG | 0.477411 | 4_1:+70415593 | None:intergenic |
CGGTAAAGCATTTGGGCTGA+AGG | 0.479081 | 4_1:-70415457 | Msa0568780:CDS |
TACACACTCTCAAGAACGAT+TGG | 0.482360 | 4_1:-70417379 | Msa0568780:CDS |
CTCAGTTTCCTTGTTTGGAG+AGG | 0.482678 | 4_1:+70415419 | None:intergenic |
GCGTCAAGGGGTAAGTTGTC+AGG | 0.483209 | 4_1:+70415606 | None:intergenic |
CTTGGCCTACTGAAGTTGAA+TGG | 0.484993 | 4_1:-70414766 | Msa0568780:CDS |
TGGGAGTGGCAGGGCTTGGT+GGG | 0.488091 | 4_1:-70415503 | Msa0568780:CDS |
TCATACCATAATACTTCATC+GGG | 0.495385 | 4_1:+70415544 | None:intergenic |
GAGAGCTCAAGGGGCTTGCT+AGG | 0.495481 | 4_1:+70414721 | None:intergenic |
GTCATACCATAATACTTCAT+CGG | 0.503227 | 4_1:+70415543 | None:intergenic |
GTTGGCGTTGTGACAAAAGT+TGG | 0.504641 | 4_1:-70415837 | Msa0568780:CDS |
ATCTGTGTAAGATATAAGAT+TGG | 0.509886 | 4_1:-70414178 | Msa0568780:three_prime_UTR |
AACCTTCGAGAGAAATGAAA+GGG | 0.510126 | 4_1:+70417548 | None:intergenic |
CCCAGGAACAACAGGGTAAG+TGG | 0.510350 | 4_1:+70417349 | None:intergenic |
TTGGCCTACTGAAGTTGAAT+GGG | 0.522268 | 4_1:-70414765 | Msa0568780:CDS |
AGCTTTGTGAAGCCTTTCCA+TGG | 0.525881 | 4_1:+70414328 | None:intergenic |
ATCAGCACCAAGTTTGTCAA+TGG | 0.528794 | 4_1:+70415395 | None:intergenic |
CGGGCTATACACGGTGATCC+CGG | 0.532660 | 4_1:+70415563 | None:intergenic |
GCATGAAATCAACACGGCCA+TGG | 0.534341 | 4_1:-70414345 | Msa0568780:CDS |
ATGGAAAGACAGAGAGCTCA+AGG | 0.539760 | 4_1:+70414710 | None:intergenic |
GTGATCCCGGCACACAGAAG+TGG | 0.541709 | 4_1:+70415576 | None:intergenic |
CAAAGACCCCGAGAAAATGA+AGG | 0.549110 | 4_1:-70415358 | Msa0568780:intron |
TATAAAGGGACACGAACCTA+TGG | 0.552541 | 4_1:-70415678 | Msa0568780:CDS |
AAATCAACACGGCCATGGAA+AGG | 0.552965 | 4_1:-70414340 | Msa0568780:CDS |
CTTATCGGAGGGAGTAACAT+TGG | 0.554132 | 4_1:-70414446 | Msa0568780:CDS |
AATGGGAAACTGGTCACTGT+AGG | 0.556394 | 4_1:-70414748 | Msa0568780:CDS |
GAACCTTCGAGAGAAATGAA+AGG | 0.562759 | 4_1:+70417547 | None:intergenic |
TGGAGGGATGAAAGAGACTC+AGG | 0.563071 | 4_1:-70414426 | Msa0568780:CDS |
ACTGAGGCCATTGACAAACT+TGG | 0.564477 | 4_1:-70415402 | Msa0568780:CDS |
TCTCGGGGTCTTTGGAAACA+AGG | 0.567661 | 4_1:+70415367 | None:intergenic |
GAAGTGGAGCACCAGCGTCA+AGG | 0.573782 | 4_1:+70415592 | None:intergenic |
CTACAAACTTGAGAAGGAGT+TGG | 0.582204 | 4_1:+70414274 | None:intergenic |
TATTAGTACCTCTCCAAACA+AGG | 0.586732 | 4_1:-70415427 | Msa0568780:CDS |
GTTTCCCATTCAACTTCAGT+AGG | 0.589745 | 4_1:+70414761 | None:intergenic |
CACACTCTCAAGAACGATTG+GGG | 0.590819 | 4_1:-70417377 | Msa0568780:CDS |
GCAGGCTGCTATGGGAACCA+TGG | 0.590820 | 4_1:-70414836 | Msa0568780:intron |
TATTATGGTATGACTGAACC+AGG | 0.592818 | 4_1:-70415534 | Msa0568780:CDS |
TGGCCTCTACAAACTTGAGA+AGG | 0.595694 | 4_1:+70414268 | None:intergenic |
GCAAACATTTGGGAGTGGCA+GGG | 0.595862 | 4_1:-70415512 | Msa0568780:CDS |
CCCAACCAAAAGCTTTGAGT+GGG | 0.597594 | 4_1:+70417600 | None:intergenic |
TACCGAATTTGATTGCAACA+TGG | 0.599803 | 4_1:+70415475 | None:intergenic |
ACCAGGCAAACATTTGGGAG+TGG | 0.602207 | 4_1:-70415517 | Msa0568780:CDS |
AAAATCAGAATAGCCACCAT+AGG | 0.602620 | 4_1:+70415662 | None:intergenic |
TGGAAAGACAGAGAGCTCAA+GGG | 0.604195 | 4_1:+70414711 | None:intergenic |
TCGGAGGGAGTAACATTGGA+GGG | 0.606287 | 4_1:-70414442 | Msa0568780:CDS |
ATCGGAGGGAGTAACATTGG+AGG | 0.607417 | 4_1:-70414443 | Msa0568780:CDS |
ACTCCTTCTCAAGTTTGTAG+AGG | 0.609994 | 4_1:-70414271 | Msa0568780:exon |
GTGGGTGATAACGTTGGTGT+TGG | 0.610605 | 4_1:-70415792 | Msa0568780:CDS |
GAAACTGAACTACATACCGC+TGG | 0.611677 | 4_1:+70415628 | None:intergenic |
TTGATTCTTCAACATGTGTG+TGG | 0.611823 | 4_1:-70414243 | Msa0568780:three_prime_UTR |
ATAATAGCAGCTGAGATCGA+TGG | 0.612153 | 4_1:-70417645 | Msa0568780:exon |
GCCCAACCAAAAGCTTTGAG+TGG | 0.615088 | 4_1:+70417599 | None:intergenic |
TAGGCCAAGCAGTGGCATCA+GGG | 0.618846 | 4_1:+70414780 | None:intergenic |
AAATGAGAAATCAAAAGTTG+AGG | 0.620431 | 4_1:+70414218 | None:intergenic |
GACAACTTACCCCTTGACGC+TGG | 0.625682 | 4_1:-70415603 | Msa0568780:CDS |
GGAAAGACAGAGAGCTCAAG+GGG | 0.626737 | 4_1:+70414712 | None:intergenic |
AGTGTGAAAATTCTATATTG+TGG | 0.629238 | 4_1:-70417419 | Msa0568780:CDS |
CTCTCCAAACAAGGAAACTG+AGG | 0.630189 | 4_1:-70415418 | Msa0568780:CDS |
CACATGTTGAAGAATCAAAG+TGG | 0.632467 | 4_1:+70414248 | None:intergenic |
ATGGGAAACTGGTCACTGTA+GGG | 0.633427 | 4_1:-70414747 | Msa0568780:CDS |
AACTTCAGTAGGCCAAGCAG+TGG | 0.635071 | 4_1:+70414772 | None:intergenic |
AAAGTAAAGATGCTCATCCA+CGG | 0.635118 | 4_1:+70417749 | None:intergenic |
AGTGGAGCACCAGCGTCAAG+GGG | 0.637977 | 4_1:+70415594 | None:intergenic |
AAAGGGACACGAACCTATGG+TGG | 0.638008 | 4_1:-70415675 | Msa0568780:CDS |
TGTGTCTATGATGTAGTCCA+TGG | 0.640415 | 4_1:+70414819 | None:intergenic |
CAGGAGATGCTCGATTTCTG+CGG | 0.641521 | 4_1:-70414407 | Msa0568780:CDS |
ATACTTCATCGGGCTATACA+CGG | 0.644181 | 4_1:+70415554 | None:intergenic |
TTCAGAGTGGGTGATAACGT+TGG | 0.661444 | 4_1:-70415798 | Msa0568780:CDS |
GCAGGACGGAAGCTTATCGG+AGG | 0.666483 | 4_1:-70414458 | Msa0568780:intron |
CAGGACGGAAGCTTATCGGA+GGG | 0.671442 | 4_1:-70414457 | Msa0568780:CDS |
TGATTCTATTAGGTGGACCG+TGG | 0.677936 | 4_1:-70417766 | None:intergenic |
ATATCGGTTTGTGATTGATG+TGG | 0.686371 | 4_1:-70414297 | Msa0568780:CDS |
ATACATACCCAGGAACAACA+GGG | 0.734302 | 4_1:+70417342 | None:intergenic |
TAAGATGCATGAAATCAACA+CGG | 0.753982 | 4_1:-70414351 | Msa0568780:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GATTAATTTTTATTTTTTGT+AGG | - | chr4_1:70414227-70414246 | Msa0568780:three_prime_UTR | 10.0% |
!!! | AAATTTAAAATATTTTGTGT+AGG | + | chr4_1:70416543-70416562 | None:intergenic | 10.0% |
!! | TAAATATATATTCAGAAATA+AGG | + | chr4_1:70416672-70416691 | None:intergenic | 10.0% |
!!! | TGTATAATATTTTATAAGAT+TGG | - | chr4_1:70417734-70417753 | Msa0568780:five_prime_UTR | 10.0% |
!! | TATTTGATTGTTAAATTAGT+TGG | - | chr4_1:70415667-70415686 | Msa0568780:CDS | 15.0% |
!!! | AGTGTATTTATTGACTTATA+CGG | + | chr4_1:70413980-70413999 | None:intergenic | 20.0% |
!!! | TTTATTTTTTGTAGGGAAAA+TGG | - | chr4_1:70414235-70414254 | Msa0568780:three_prime_UTR | 20.0% |
!! | TGTTGAATTGAATAGAAAAA+TGG | - | chr4_1:70414497-70414516 | Msa0568780:intron | 20.0% |
!!! | TAATTCACTTTATTTACCTT+TGG | - | chr4_1:70414706-70414725 | Msa0568780:CDS | 20.0% |
!! | ATTTAATTATCTGTTCGTAA+GGG | + | chr4_1:70415030-70415049 | None:intergenic | 20.0% |
!! | TATTTAATTATCTGTTCGTA+AGG | + | chr4_1:70415031-70415050 | None:intergenic | 20.0% |
!! | TGTTAAACATGATTAAAAAC+AGG | + | chr4_1:70415079-70415098 | None:intergenic | 20.0% |
!!! | AGTTCAAATTCTGTTTTTTA+AGG | + | chr4_1:70415120-70415139 | None:intergenic | 20.0% |
!!! | TTTTCAAATTATTAGTGTGT+CGG | + | chr4_1:70415201-70415220 | None:intergenic | 20.0% |
!!! | TGTTCATTCTTTTTCATTAA+TGG | - | chr4_1:70415386-70415405 | Msa0568780:CDS | 20.0% |
!!! | TCTTTTTCATTAATGGTTTA+CGG | - | chr4_1:70415393-70415412 | Msa0568780:CDS | 20.0% |
!! | AAACTATTAATCAATAGTCA+AGG | + | chr4_1:70415701-70415720 | None:intergenic | 20.0% |
!! | ATCCATAGTTTACTTATAAA+TGG | - | chr4_1:70416470-70416489 | Msa0568780:intron | 20.0% |
!! | TCCATAGTTTACTTATAAAT+GGG | - | chr4_1:70416471-70416490 | Msa0568780:intron | 20.0% |
!! | TAGAATAATATAGTAATCGT+TGG | - | chr4_1:70416574-70416593 | Msa0568780:intron | 20.0% |
!! | GGCACTATATATATATTAAT+TGG | + | chr4_1:70416701-70416720 | None:intergenic | 20.0% |
!! | TTTGTTTATATACTCATTGA+CGG | + | chr4_1:70416747-70416766 | None:intergenic | 20.0% |
!!! | GTTTAAATACAATTTTATGC+AGG | - | chr4_1:70416836-70416855 | Msa0568780:intron | 20.0% |
!! | CAATTCAAATTCACATATTA+TGG | + | chr4_1:70417051-70417070 | None:intergenic | 20.0% |
!! | TGAAAATTTGGATAATTCAT+TGG | + | chr4_1:70417193-70417212 | None:intergenic | 20.0% |
! | AGTGTGAAAATTCTATATTG+TGG | - | chr4_1:70414271-70414290 | Msa0568780:exon | 25.0% |
! | TATTCAATTCAACAGAAAGA+CGG | + | chr4_1:70414491-70414510 | None:intergenic | 25.0% |
! | CATACTTGTCTATTAGAATT+TGG | - | chr4_1:70414672-70414691 | Msa0568780:intron | 25.0% |
! | AGCTTATGAAAATTCTCATA+AGG | + | chr4_1:70414818-70414837 | None:intergenic | 25.0% |
! | TAGGTGGTTATTCATATAAT+AGG | + | chr4_1:70415056-70415075 | None:intergenic | 25.0% |
! | AAACATGATTAAAAACAGGT+AGG | + | chr4_1:70415075-70415094 | None:intergenic | 25.0% |
! | TAATCATGTTTAACACACTT+AGG | - | chr4_1:70415084-70415103 | Msa0568780:intron | 25.0% |
! | TTAAGTGTAATTACAAGTGT+CGG | - | chr4_1:70415231-70415250 | Msa0568780:intron | 25.0% |
! | CATTAATCCTAGTAAACTAT+TGG | - | chr4_1:70415433-70415452 | Msa0568780:CDS | 25.0% |
!!! | ATGTAATTTTGAGGTTACAT+GGG | + | chr4_1:70415459-70415478 | None:intergenic | 25.0% |
!!! | TATGTAATTTTGAGGTTACA+TGG | + | chr4_1:70415460-70415479 | None:intergenic | 25.0% |
!! | AGACACATTATGTAATTTTG+AGG | + | chr4_1:70415468-70415487 | None:intergenic | 25.0% |
!! | GATGATATGTATGCAATTTT+TGG | - | chr4_1:70415567-70415586 | Msa0568780:CDS | 25.0% |
! | CTTGCTTATAAGTTATATGA+AGG | - | chr4_1:70415762-70415781 | Msa0568780:CDS | 25.0% |
! | AATGTGAAAAAATTCAGAGT+GGG | - | chr4_1:70415880-70415899 | Msa0568780:intron | 25.0% |
! | TTATAGGTAAATACAGGTTT+AGG | + | chr4_1:70415985-70416004 | None:intergenic | 25.0% |
! | GTTCTATATAGGAGTTATTA+TGG | - | chr4_1:70416439-70416458 | Msa0568780:intron | 25.0% |
!!! | ATCCAGAAATTTTGAAAACT+GGG | + | chr4_1:70416724-70416743 | None:intergenic | 25.0% |
! | AATTGACAGAGAATTATTGA+TGG | + | chr4_1:70417020-70417039 | None:intergenic | 25.0% |
! | TAAATGTTTCAGTTCAGATT+TGG | + | chr4_1:70417105-70417124 | None:intergenic | 25.0% |
! | ACATTAGACATGTGAAAATT+TGG | + | chr4_1:70417205-70417224 | None:intergenic | 25.0% |
! | AAATGAGAAATCAAAAGTTG+AGG | + | chr4_1:70417475-70417494 | None:intergenic | 25.0% |
! | ATCTGTGTAAGATATAAGAT+TGG | - | chr4_1:70417512-70417531 | Msa0568780:intron | 25.0% |
! | ATTGTCGTCTAATTTATTGT+AGG | - | chr4_1:70417552-70417571 | Msa0568780:CDS | 25.0% |
AAGACTGAGATGAAAAGAAA+AGG | + | chr4_1:70414192-70414211 | None:intergenic | 30.0% | |
AAAGAAAAACATACATACCC+AGG | + | chr4_1:70414361-70414380 | None:intergenic | 30.0% | |
AATTTGAGGGGTAAAGAATT+GGG | + | chr4_1:70414538-70414557 | None:intergenic | 30.0% | |
TAATTTGAGGGGTAAAGAAT+TGG | + | chr4_1:70414539-70414558 | None:intergenic | 30.0% | |
AAACATACACATCATTCCAA+AGG | + | chr4_1:70414725-70414744 | None:intergenic | 30.0% | |
! | TTTGGAATGATGTGTATGTT+TGG | - | chr4_1:70414724-70414743 | Msa0568780:CDS | 30.0% |
!! | GATATGTATGCAATTTTTGG+TGG | - | chr4_1:70415570-70415589 | Msa0568780:CDS | 30.0% |
ATTAATAGTTTATGCGTGCA+TGG | - | chr4_1:70415710-70415729 | Msa0568780:CDS | 30.0% | |
CTTTGTGCAATAGTCAATAT+TGG | - | chr4_1:70415733-70415752 | Msa0568780:CDS | 30.0% | |
AGTTATATGAAGGTAAAACC+AGG | - | chr4_1:70415772-70415791 | Msa0568780:CDS | 30.0% | |
!!! | TTAACTTGCATTGACTTTTG+TGG | - | chr4_1:70415807-70415826 | Msa0568780:CDS | 30.0% |
CAATGTGAAAAAATTCAGAG+TGG | - | chr4_1:70415879-70415898 | Msa0568780:intron | 30.0% | |
TGAGAATTGCAATCAAGATT+TGG | - | chr4_1:70415948-70415967 | Msa0568780:intron | 30.0% | |
ACCTATAACTCTCCTTATAA+AGG | - | chr4_1:70415997-70416016 | Msa0568780:intron | 30.0% | |
CCTATAACTCTCCTTATAAA+GGG | - | chr4_1:70415998-70416017 | Msa0568780:intron | 30.0% | |
TCATACCATAATACTTCATC+GGG | + | chr4_1:70416149-70416168 | None:intergenic | 30.0% | |
GTCATACCATAATACTTCAT+CGG | + | chr4_1:70416150-70416169 | None:intergenic | 30.0% | |
! | ATCAAATTCGGTAAAGCATT+TGG | - | chr4_1:70416225-70416244 | Msa0568780:intron | 30.0% |
! | TCAAATTCGGTAAAGCATTT+GGG | - | chr4_1:70416226-70416245 | Msa0568780:intron | 30.0% |
! | TATCTTACCTTCATTTTCTC+GGG | + | chr4_1:70416342-70416361 | None:intergenic | 30.0% |
! | GTATCTTACCTTCATTTTCT+CGG | + | chr4_1:70416343-70416362 | None:intergenic | 30.0% |
!!! | TGGTTTTAAAGTTAATGGTG+TGG | + | chr4_1:70416365-70416384 | None:intergenic | 30.0% |
!!! | CAGGTTGGTTTTAAAGTTAA+TGG | + | chr4_1:70416370-70416389 | None:intergenic | 30.0% |
ACGAAATAAGAGTAAAACAG+CGG | + | chr4_1:70416413-70416432 | None:intergenic | 30.0% | |
TTCGTCATACAGTTCTATAT+AGG | - | chr4_1:70416428-70416447 | Msa0568780:intron | 30.0% | |
GCCCATTTATAAGTAAACTA+TGG | + | chr4_1:70416475-70416494 | None:intergenic | 30.0% | |
TAGTTTACTTATAAATGGGC+AGG | - | chr4_1:70416475-70416494 | Msa0568780:intron | 30.0% | |
GAGAATAAGTGTAGGTTATT+TGG | + | chr4_1:70416608-70416627 | None:intergenic | 30.0% | |
!! | TCCAGAAATTTTGAAAACTG+GGG | + | chr4_1:70416723-70416742 | None:intergenic | 30.0% |
!! | GATCCAGAAATTTTGAAAAC+TGG | + | chr4_1:70416725-70416744 | None:intergenic | 30.0% |
!! | AGTTTGAACAATGGATTGAT+TGG | - | chr4_1:70416786-70416805 | Msa0568780:intron | 30.0% |
TAAGATGCATGAAATCAACA+CGG | - | chr4_1:70417339-70417358 | Msa0568780:intron | 30.0% | |
ACAAAGCTGATGTGAAATAT+CGG | - | chr4_1:70417377-70417396 | Msa0568780:CDS | 30.0% | |
AAAGTAAAGATGCTCATCCA+CGG | + | chr4_1:70413944-70413963 | None:intergenic | 35.0% | |
ATCAAAAAGAAACGAGAACG+CGG | - | chr4_1:70414019-70414038 | Msa0568780:three_prime_UTR | 35.0% | |
AACCTTCGAGAGAAATGAAA+GGG | + | chr4_1:70414145-70414164 | None:intergenic | 35.0% | |
TTCTTTACCCCTCAAATTAG+AGG | - | chr4_1:70414540-70414559 | Msa0568780:intron | 35.0% | |
GTATGACATAATCATCAAGC+AGG | + | chr4_1:70414653-70414672 | None:intergenic | 35.0% | |
CATGATTAAAAACAGGTAGG+TGG | + | chr4_1:70415072-70415091 | None:intergenic | 35.0% | |
TACTTTGCAACTATGAAGCA+CGG | + | chr4_1:70415315-70415334 | None:intergenic | 35.0% | |
CTGTGTTACAAATGAAGTCT+AGG | - | chr4_1:70415486-70415505 | Msa0568780:CDS | 35.0% | |
CAATATTCACGATCTAGAAG+CGG | - | chr4_1:70415601-70415620 | Msa0568780:CDS | 35.0% | |
! | TCACTGCAGTTTTCTATCTT+TGG | - | chr4_1:70415630-70415649 | Msa0568780:CDS | 35.0% |
! | TTTTGCAGGCATGAAATTGT+TGG | - | chr4_1:70415835-70415854 | Msa0568780:CDS | 35.0% |
GGAGAGTTATAGGTAAATAC+AGG | + | chr4_1:70415991-70416010 | None:intergenic | 35.0% | |
CCCTTTATAAGGAGAGTTAT+AGG | + | chr4_1:70416001-70416020 | None:intergenic | 35.0% | |
AAAATCAGAATAGCCACCAT+AGG | + | chr4_1:70416031-70416050 | None:intergenic | 35.0% | |
! | TATAGCCCGATGAAGTATTA+TGG | - | chr4_1:70416141-70416160 | Msa0568780:intron | 35.0% |
TATTATGGTATGACTGAACC+AGG | - | chr4_1:70416156-70416175 | Msa0568780:intron | 35.0% | |
TACCGAATTTGATTGCAACA+TGG | + | chr4_1:70416218-70416237 | None:intergenic | 35.0% | |
TATTAGTACCTCTCCAAACA+AGG | - | chr4_1:70416263-70416282 | Msa0568780:intron | 35.0% | |
! | ATCTTACCTTCATTTTCTCG+GGG | + | chr4_1:70416341-70416360 | None:intergenic | 35.0% |
GTCAAGTGTGATTTAAGTGT+GGG | + | chr4_1:70416637-70416656 | None:intergenic | 35.0% | |
TGTCAAGTGTGATTTAAGTG+TGG | + | chr4_1:70416638-70416657 | None:intergenic | 35.0% | |
!! | CCAGAAATTTTGAAAACTGG+GGG | + | chr4_1:70416722-70416741 | None:intergenic | 35.0% |
GTAAACCTGAGTTTGAACAA+TGG | - | chr4_1:70416777-70416796 | Msa0568780:intron | 35.0% | |
TCAATCCATTGTTCAAACTC+AGG | + | chr4_1:70416785-70416804 | None:intergenic | 35.0% | |
! | AATTTTATGCAGGCTGCTAT+GGG | - | chr4_1:70416846-70416865 | Msa0568780:intron | 35.0% |
CAGTTCAGATTTGGAAGTAA+CGG | + | chr4_1:70417096-70417115 | None:intergenic | 35.0% | |
!! | ATATCGGTTTGTGATTGATG+TGG | - | chr4_1:70417393-70417412 | Msa0568780:CDS | 35.0% |
CACATGTTGAAGAATCAAAG+TGG | + | chr4_1:70417445-70417464 | None:intergenic | 35.0% | |
TTGATTCTTCAACATGTGTG+TGG | - | chr4_1:70417447-70417466 | Msa0568780:intron | 35.0% | |
GTCTAATTTATTGTAGGCTC+AGG | - | chr4_1:70417558-70417577 | Msa0568780:CDS | 35.0% | |
ATAATAGCAGCTGAGATCGA+TGG | - | chr4_1:70414045-70414064 | Msa0568780:three_prime_UTR | 40.0% | |
!! | AAAAGCTTTGAGTGGGAGTT+CGG | + | chr4_1:70414086-70414105 | None:intergenic | 40.0% |
GAACCTTCGAGAGAAATGAA+AGG | + | chr4_1:70414146-70414165 | None:intergenic | 40.0% | |
TACACACTCTCAAGAACGAT+TGG | - | chr4_1:70414311-70414330 | Msa0568780:CDS | 40.0% | |
ACACACTCTCAAGAACGATT+GGG | - | chr4_1:70414312-70414331 | Msa0568780:CDS | 40.0% | |
ATACATACCCAGGAACAACA+GGG | + | chr4_1:70414351-70414370 | None:intergenic | 40.0% | |
TTTACCCCTCAAATTAGAGG+TGG | - | chr4_1:70414543-70414562 | Msa0568780:intron | 40.0% | |
AACCTCCACCTCTAATTTGA+GGG | + | chr4_1:70414551-70414570 | None:intergenic | 40.0% | |
AGTTGCAAAGCTATGAAGCA+CGG | - | chr4_1:70415151-70415170 | Msa0568780:intron | 40.0% | |
AAAGCTATGAAGCACGGATA+CGG | - | chr4_1:70415157-70415176 | Msa0568780:intron | 40.0% | |
ACATGGGCCAATAGTTTACT+AGG | + | chr4_1:70415443-70415462 | None:intergenic | 40.0% | |
CACTGCAAAGACTGGAAATA+AGG | - | chr4_1:70415545-70415564 | Msa0568780:CDS | 40.0% | |
! | CTGCAGTTTTCTATCTTTGG+AGG | - | chr4_1:70415633-70415652 | Msa0568780:CDS | 40.0% |
AGGTAAAACCAGGACATCTT+TGG | - | chr4_1:70415782-70415801 | Msa0568780:CDS | 40.0% | |
GGTAAAACCAGGACATCTTT+GGG | - | chr4_1:70415783-70415802 | Msa0568780:CDS | 40.0% | |
AGTTAATCCCAAAGATGTCC+TGG | + | chr4_1:70415793-70415812 | None:intergenic | 40.0% | |
! | CTTTTGTGGTTGTGTTTTGC+AGG | - | chr4_1:70415821-70415840 | Msa0568780:CDS | 40.0% |
TAGGTTCGTGTCCCTTTATA+AGG | + | chr4_1:70416012-70416031 | None:intergenic | 40.0% | |
TATAAAGGGACACGAACCTA+TGG | - | chr4_1:70416012-70416031 | Msa0568780:intron | 40.0% | |
! | TGGTGGCTATTCTGATTTTG+TGG | - | chr4_1:70416032-70416051 | Msa0568780:intron | 40.0% |
! | ATTTTGTGGTTGTTCACCAG+CGG | - | chr4_1:70416046-70416065 | Msa0568780:intron | 40.0% |
ATACTTCATCGGGCTATACA+CGG | + | chr4_1:70416139-70416158 | None:intergenic | 40.0% | |
ACTGAACCAGGCAAACATTT+GGG | - | chr4_1:70416168-70416187 | Msa0568780:intron | 40.0% | |
GGCCATGTTGCAATCAAATT+CGG | - | chr4_1:70416213-70416232 | Msa0568780:intron | 40.0% | |
ATCAGCACCAAGTTTGTCAA+TGG | + | chr4_1:70416298-70416317 | None:intergenic | 40.0% | |
AAAACCAACCTGTTTCGTCT+AGG | - | chr4_1:70416378-70416397 | Msa0568780:intron | 40.0% | |
ATAACCTAGACGAAACAGGT+TGG | + | chr4_1:70416385-70416404 | None:intergenic | 40.0% | |
GGCAAAGAGAGAATAAGTGT+AGG | + | chr4_1:70416616-70416635 | None:intergenic | 40.0% | |
! | CCCCCAGTTTTCAAAATTTC+TGG | - | chr4_1:70416719-70416738 | Msa0568780:intron | 40.0% |
! | CAATTTTATGCAGGCTGCTA+TGG | - | chr4_1:70416845-70416864 | Msa0568780:intron | 40.0% |
TGTGTCTATGATGTAGTCCA+TGG | + | chr4_1:70416874-70416893 | None:intergenic | 40.0% | |
TTGGCCTACTGAAGTTGAAT+GGG | - | chr4_1:70416925-70416944 | Msa0568780:intron | 40.0% | |
GTTTCCCATTCAACTTCAGT+AGG | + | chr4_1:70416932-70416951 | None:intergenic | 40.0% | |
ACTGAAGTTGAATGGGAAAC+TGG | - | chr4_1:70416932-70416951 | Msa0568780:intron | 40.0% | |
TCTGTCTTTCCATTAGTTGC+AGG | - | chr4_1:70416990-70417009 | Msa0568780:intron | 40.0% | |
GATGGTTTACCTGCAACTAA+TGG | + | chr4_1:70417002-70417021 | None:intergenic | 40.0% | |
ATGTCTAATGTCTTGACTGC+AGG | - | chr4_1:70417214-70417233 | Msa0568780:intron | 40.0% | |
CTACAAACTTGAGAAGGAGT+TGG | + | chr4_1:70417419-70417438 | None:intergenic | 40.0% | |
ACTCCTTCTCAAGTTTGTAG+AGG | - | chr4_1:70417419-70417438 | Msa0568780:CDS | 40.0% | |
!! | CACAGATCTTAGCTTTTCTC+AGG | + | chr4_1:70417499-70417518 | None:intergenic | 40.0% |
! | TGTCTGACTAAAAGCGTGTT+TGG | - | chr4_1:70417617-70417636 | Msa0568780:CDS | 40.0% |
! | CTAAAAGCGTGTTTGGTCTT+AGG | - | chr4_1:70417624-70417643 | Msa0568780:CDS | 40.0% |
TTTGAGTGGGAGTTCGGTTT+CGG | + | chr4_1:70414080-70414099 | None:intergenic | 45.0% | |
! | GAACTCCCACTCAAAGCTTT+TGG | - | chr4_1:70414085-70414104 | Msa0568780:three_prime_UTR | 45.0% |
! | TCCCACTCAAAGCTTTTGGT+TGG | - | chr4_1:70414089-70414108 | Msa0568780:three_prime_UTR | 45.0% |
!! | CCCAACCAAAAGCTTTGAGT+GGG | + | chr4_1:70414093-70414112 | None:intergenic | 45.0% |
!! | CCCACTCAAAGCTTTTGGTT+GGG | - | chr4_1:70414090-70414109 | Msa0568780:three_prime_UTR | 45.0% |
CTCCCTTTCATTTCTCTCGA+AGG | - | chr4_1:70414140-70414159 | Msa0568780:three_prime_UTR | 45.0% | |
CACACTCTCAAGAACGATTG+GGG | - | chr4_1:70414313-70414332 | Msa0568780:CDS | 45.0% | |
CATACATACCCAGGAACAAC+AGG | + | chr4_1:70414352-70414371 | None:intergenic | 45.0% | |
ACCTCCACCTCTAATTTGAG+GGG | + | chr4_1:70414550-70414569 | None:intergenic | 45.0% | |
CAACCTCCACCTCTAATTTG+AGG | + | chr4_1:70414552-70414571 | None:intergenic | 45.0% | |
! | TCTGTTCGTAAGGGCTTGTT+TGG | + | chr4_1:70415021-70415040 | None:intergenic | 45.0% |
TTCAAGTGCACTGCAAAGAC+TGG | - | chr4_1:70415537-70415556 | Msa0568780:CDS | 45.0% | |
GTTGGCGTTGTGACAAAAGT+TGG | - | chr4_1:70415853-70415872 | Msa0568780:intron | 45.0% | |
! | TTCAGAGTGGGTGATAACGT+TGG | - | chr4_1:70415892-70415911 | Msa0568780:intron | 45.0% |
GAAACTGAACTACATACCGC+TGG | + | chr4_1:70416065-70416084 | None:intergenic | 45.0% | |
GACTGAACCAGGCAAACATT+TGG | - | chr4_1:70416167-70416186 | Msa0568780:intron | 45.0% | |
! | CTCAGTTTCCTTGTTTGGAG+AGG | + | chr4_1:70416274-70416293 | None:intergenic | 45.0% |
CTCTCCAAACAAGGAAACTG+AGG | - | chr4_1:70416272-70416291 | Msa0568780:intron | 45.0% | |
ATGGCCTCAGTTTCCTTGTT+TGG | + | chr4_1:70416279-70416298 | None:intergenic | 45.0% | |
ACTGAGGCCATTGACAAACT+TGG | - | chr4_1:70416288-70416307 | Msa0568780:intron | 45.0% | |
! | CTTCATTTTCTCGGGGTCTT+TGG | + | chr4_1:70416334-70416353 | None:intergenic | 45.0% |
CAAAGACCCCGAGAAAATGA+AGG | - | chr4_1:70416332-70416351 | Msa0568780:intron | 45.0% | |
GAGCATAACCTAGACGAAAC+AGG | + | chr4_1:70416389-70416408 | None:intergenic | 45.0% | |
TTATAAATGGGCAGGTCGCT+AGG | - | chr4_1:70416483-70416502 | Msa0568780:intron | 45.0% | |
TATAAATGGGCAGGTCGCTA+GGG | - | chr4_1:70416484-70416503 | Msa0568780:intron | 45.0% | |
ATGCATGTGTGATGTGGTGT+GGG | - | chr4_1:70416511-70416530 | Msa0568780:intron | 45.0% | |
CTTGGCCTACTGAAGTTGAA+TGG | - | chr4_1:70416924-70416943 | Msa0568780:intron | 45.0% | |
AATGGGAAACTGGTCACTGT+AGG | - | chr4_1:70416942-70416961 | Msa0568780:intron | 45.0% | |
ATGGGAAACTGGTCACTGTA+GGG | - | chr4_1:70416943-70416962 | Msa0568780:intron | 45.0% | |
TGGAAAGACAGAGAGCTCAA+GGG | + | chr4_1:70416982-70417001 | None:intergenic | 45.0% | |
ATGGAAAGACAGAGAGCTCA+AGG | + | chr4_1:70416983-70417002 | None:intergenic | 45.0% | |
!! | GGAAGTAACGGACTCATTCT+TGG | + | chr4_1:70417084-70417103 | None:intergenic | 45.0% |
CTAATGTCTTGACTGCAGGA+CGG | - | chr4_1:70417218-70417237 | Msa0568780:intron | 45.0% | |
CTTATCGGAGGGAGTAACAT+TGG | - | chr4_1:70417244-70417263 | Msa0568780:intron | 45.0% | |
AAATCAACACGGCCATGGAA+AGG | - | chr4_1:70417350-70417369 | Msa0568780:CDS | 45.0% | |
! | AGCTTTGTGAAGCCTTTCCA+TGG | + | chr4_1:70417365-70417384 | None:intergenic | 45.0% |
TGGCCTCTACAAACTTGAGA+AGG | + | chr4_1:70417425-70417444 | None:intergenic | 45.0% | |
!!! | ATTAATTTTTATTTTTTGTA+GGG | - | chr4_1:70414228-70414247 | Msa0568780:three_prime_UTR | 5.0% |
TTGAGTGGGAGTTCGGTTTC+GGG | + | chr4_1:70414079-70414098 | None:intergenic | 50.0% | |
!! | GCCCAACCAAAAGCTTTGAG+TGG | + | chr4_1:70414094-70414113 | None:intergenic | 50.0% |
ACCACTTACCCTGTTGTTCC+TGG | - | chr4_1:70414340-70414359 | Msa0568780:CDS | 50.0% | |
CCACTTACCCTGTTGTTCCT+GGG | - | chr4_1:70414341-70414360 | Msa0568780:CDS | 50.0% | |
ACCCCTCAAATTAGAGGTGG+AGG | - | chr4_1:70414546-70414565 | Msa0568780:intron | 50.0% | |
TGAAGCACGGATACGGACAT+CGG | - | chr4_1:70415164-70415183 | Msa0568780:intron | 50.0% | |
!! | TACAAGTGTCGGTGTCGTGT+TGG | - | chr4_1:70415242-70415261 | Msa0568780:intron | 50.0% |
TATGAAGCACGGACACTCCT+CGG | + | chr4_1:70415304-70415323 | None:intergenic | 50.0% | |
! | GTGGGTGATAACGTTGGTGT+TGG | - | chr4_1:70415898-70415917 | Msa0568780:intron | 50.0% |
AAAGGGACACGAACCTATGG+TGG | - | chr4_1:70416015-70416034 | Msa0568780:intron | 50.0% | |
ACCAGGCAAACATTTGGGAG+TGG | - | chr4_1:70416173-70416192 | Msa0568780:intron | 50.0% | |
GCAAACATTTGGGAGTGGCA+GGG | - | chr4_1:70416178-70416197 | Msa0568780:intron | 50.0% | |
! | CGGTAAAGCATTTGGGCTGA+AGG | - | chr4_1:70416233-70416252 | Msa0568780:intron | 50.0% |
! | TCTCGGGGTCTTTGGAAACA+AGG | + | chr4_1:70416326-70416345 | None:intergenic | 50.0% |
GATGCATGTGTGATGTGGTG+TGG | - | chr4_1:70416510-70416529 | Msa0568780:intron | 50.0% | |
AACTTCAGTAGGCCAAGCAG+TGG | + | chr4_1:70416921-70416940 | None:intergenic | 50.0% | |
GGAAAGACAGAGAGCTCAAG+GGG | + | chr4_1:70416981-70417000 | None:intergenic | 50.0% | |
ACTGCAGGACGGAAGCTTAT+CGG | - | chr4_1:70417229-70417248 | Msa0568780:intron | 50.0% | |
ATCGGAGGGAGTAACATTGG+AGG | - | chr4_1:70417247-70417266 | Msa0568780:intron | 50.0% | |
TCGGAGGGAGTAACATTGGA+GGG | - | chr4_1:70417248-70417267 | Msa0568780:intron | 50.0% | |
TGGAGGGATGAAAGAGACTC+AGG | - | chr4_1:70417264-70417283 | Msa0568780:intron | 50.0% | |
CAGGAGATGCTCGATTTCTG+CGG | - | chr4_1:70417283-70417302 | Msa0568780:intron | 50.0% | |
GCATGAAATCAACACGGCCA+TGG | - | chr4_1:70417345-70417364 | Msa0568780:intron | 50.0% | |
TGGGCTGCTAGAGACACTTC+TGG | - | chr4_1:70414109-70414128 | Msa0568780:three_prime_UTR | 55.0% | |
CCCAGGAACAACAGGGTAAG+TGG | + | chr4_1:70414344-70414363 | None:intergenic | 55.0% | |
!! | TGTCGGTGTCGTGTTGGTGT+CGG | - | chr4_1:70415248-70415267 | Msa0568780:intron | 55.0% |
GATTAGGCGTGTCCTGGTGT+CGG | + | chr4_1:70415282-70415301 | None:intergenic | 55.0% | |
GCGTCAAGGGGTAAGTTGTC+AGG | + | chr4_1:70416087-70416106 | None:intergenic | 55.0% | |
GACAACTTACCCCTTGACGC+TGG | - | chr4_1:70416087-70416106 | Msa0568780:intron | 55.0% | |
! | AAGTGGAGCACCAGCGTCAA+GGG | + | chr4_1:70416100-70416119 | None:intergenic | 55.0% |
GCCACTCCCAAATGTTTGCC+TGG | + | chr4_1:70416177-70416196 | None:intergenic | 55.0% | |
GGCAAACATTTGGGAGTGGC+AGG | - | chr4_1:70416177-70416196 | Msa0568780:intron | 55.0% | |
GGACGGATGCATGTGTGATG+TGG | - | chr4_1:70416505-70416524 | Msa0568780:intron | 55.0% | |
CATTCCCTGATGCCACTGCT+TGG | - | chr4_1:70416906-70416925 | Msa0568780:intron | 55.0% | |
TAGGCCAAGCAGTGGCATCA+GGG | + | chr4_1:70416913-70416932 | None:intergenic | 55.0% | |
CAGGACGGAAGCTTATCGGA+GGG | - | chr4_1:70417233-70417252 | Msa0568780:intron | 55.0% | |
ACCAGGACACGCCTAATCCG+AGG | - | chr4_1:70415284-70415303 | Msa0568780:intron | 60.0% | |
! | TCCTCGGATTAGGCGTGTCC+TGG | + | chr4_1:70415288-70415307 | None:intergenic | 60.0% |
GCACGGACACTCCTCGGATT+AGG | + | chr4_1:70415298-70415317 | None:intergenic | 60.0% | |
! | AGTGGAGCACCAGCGTCAAG+GGG | + | chr4_1:70416099-70416118 | None:intergenic | 60.0% |
! | GAAGTGGAGCACCAGCGTCA+AGG | + | chr4_1:70416101-70416120 | None:intergenic | 60.0% |
GGTGCTCCACTTCTGTGTGC+CGG | - | chr4_1:70416108-70416127 | Msa0568780:intron | 60.0% | |
GTGCTCCACTTCTGTGTGCC+GGG | - | chr4_1:70416109-70416128 | Msa0568780:intron | 60.0% | |
GTGATCCCGGCACACAGAAG+TGG | + | chr4_1:70416117-70416136 | None:intergenic | 60.0% | |
CGGGCTATACACGGTGATCC+CGG | + | chr4_1:70416130-70416149 | None:intergenic | 60.0% | |
CATTTGGGAGTGGCAGGGCT+TGG | - | chr4_1:70416183-70416202 | Msa0568780:intron | 60.0% | |
AATGGGCAGGTCGCTAGGGA+CGG | - | chr4_1:70416488-70416507 | Msa0568780:intron | 60.0% | |
GCAGGCTGCTATGGGAACCA+TGG | - | chr4_1:70416854-70416873 | Msa0568780:intron | 60.0% | |
GTAGGCCAAGCAGTGGCATC+AGG | + | chr4_1:70416914-70416933 | None:intergenic | 60.0% | |
! | GAGAGCTCAAGGGGCTTGCT+AGG | + | chr4_1:70416972-70416991 | None:intergenic | 60.0% |
GCAGGACGGAAGCTTATCGG+AGG | - | chr4_1:70417232-70417251 | Msa0568780:intron | 60.0% | |
TCGGACACGTGTCCGACACC+AGG | - | chr4_1:70415267-70415286 | Msa0568780:intron | 65.0% | |
TTGGGAGTGGCAGGGCTTGG+TGG | - | chr4_1:70416186-70416205 | Msa0568780:intron | 65.0% | |
! | TGGGAGTGGCAGGGCTTGGT+GGG | - | chr4_1:70416187-70416206 | Msa0568780:intron | 65.0% |
!! | GTGGCAGGGCTTGGTGGGTT+AGG | - | chr4_1:70416192-70416211 | Msa0568780:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 70413936 | 70417776 | 70413936 | ID=Msa0568780;Name=Msa0568780 |
chr4_1 | mRNA | 70413936 | 70417776 | 70413936 | ID=Msa0568780-mRNA-1;Parent=Msa0568780;Name=Msa0568780-mRNA-1;_AED=0.10;_eAED=0.10;_QI=128|1|1|1|1|1|5|338|359 |
chr4_1 | exon | 70413936 | 70414476 | 70413936 | ID=Msa0568780-mRNA-1:exon:23773;Parent=Msa0568780-mRNA-1 |
chr4_1 | exon | 70414701 | 70414854 | 70414701 | ID=Msa0568780-mRNA-1:exon:23772;Parent=Msa0568780-mRNA-1 |
chr4_1 | exon | 70415359 | 70415869 | 70415359 | ID=Msa0568780-mRNA-1:exon:23771;Parent=Msa0568780-mRNA-1 |
chr4_1 | exon | 70417350 | 70417463 | 70417350 | ID=Msa0568780-mRNA-1:exon:23770;Parent=Msa0568780-mRNA-1 |
chr4_1 | exon | 70417551 | 70417776 | 70417551 | ID=Msa0568780-mRNA-1:exon:23769;Parent=Msa0568780-mRNA-1 |
chr4_1 | five_prime_UTR | 70417649 | 70417776 | 70417649 | ID=Msa0568780-mRNA-1:five_prime_utr;Parent=Msa0568780-mRNA-1 |
chr4_1 | CDS | 70417551 | 70417648 | 70417551 | ID=Msa0568780-mRNA-1:cds;Parent=Msa0568780-mRNA-1 |
chr4_1 | CDS | 70417350 | 70417463 | 70417350 | ID=Msa0568780-mRNA-1:cds;Parent=Msa0568780-mRNA-1 |
chr4_1 | CDS | 70415359 | 70415869 | 70415359 | ID=Msa0568780-mRNA-1:cds;Parent=Msa0568780-mRNA-1 |
chr4_1 | CDS | 70414701 | 70414854 | 70414701 | ID=Msa0568780-mRNA-1:cds;Parent=Msa0568780-mRNA-1 |
chr4_1 | CDS | 70414274 | 70414476 | 70414274 | ID=Msa0568780-mRNA-1:cds;Parent=Msa0568780-mRNA-1 |
chr4_1 | three_prime_UTR | 70413936 | 70414273 | 70413936 | ID=Msa0568780-mRNA-1:three_prime_utr;Parent=Msa0568780-mRNA-1 |
Gene Sequence |
Protein sequence |