AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0956600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0956600 MtrunA17_Chr6g0472551 95.395 456 21 0 1 456 1 456 0.0 790
Msa0956600 MtrunA17_Chr1g0203711 64.681 470 123 14 1 456 1 441 1.63e-162 466
Msa0956600 MtrunA17_Chr4g0057321 38.810 353 185 8 119 456 90 426 6.65e-57 194
Msa0956600 MtrunA17_Chr1g0204901 34.954 329 134 11 107 421 124 386 6.31e-33 129
Msa0956600 MtrunA17_Chr8g0340761 37.343 399 180 13 25 411 36 376 7.77e-29 117
Msa0956600 MtrunA17_Chr8g0389781 34.202 307 133 13 119 408 128 382 2.32e-27 113
Msa0956600 MtrunA17_Chr8g0346021 31.680 363 167 12 119 414 129 477 4.33e-27 114
Msa0956600 MtrunA17_Chr1g0166431 40.373 161 59 5 17 169 38 169 1.84e-21 96.3
Msa0956600 MtrunA17_Chr7g0273951 44.094 127 58 3 119 244 108 222 1.78e-19 90.1
Msa0956600 MtrunA17_Chr4g0020671 30.244 205 108 7 1 195 9 188 7.55e-19 88.6
Msa0956600 MtrunA17_Chr1g0200161 51.190 84 40 1 112 195 137 219 2.42e-18 87.4
Msa0956600 MtrunA17_Chr4g0045641 45.333 75 41 0 119 193 148 222 1.08e-16 82.4
Msa0956600 MtrunA17_Chr4g0060381 42.063 126 63 4 63 184 48 167 2.74e-16 81.3
Msa0956600 MtrunA17_Chr4g0025441 68.421 57 18 0 112 168 91 147 3.33e-16 80.5
Msa0956600 MtrunA17_Chr2g0330921 56.000 75 30 1 108 179 85 159 4.43e-16 79.3
Msa0956600 MtrunA17_Chr3g0126901 38.235 170 73 5 109 247 104 272 1.38e-15 78.6
Msa0956600 MtrunA17_Chr7g0273861 40.909 132 65 2 63 184 64 192 3.40e-15 77.4
Msa0956600 MtrunA17_Chr6g0462191 34.717 265 123 6 58 287 62 311 3.40e-15 77.4
Msa0956600 MtrunA17_Chr8g0371131 57.353 68 29 0 113 180 67 134 3.68e-15 72.4
Msa0956600 MtrunA17_Chr1g0146931 65.000 60 21 0 109 168 114 173 3.34e-14 74.7
Msa0956600 MtrunA17_Chr1g0181581 45.333 75 41 0 119 193 118 192 2.10e-13 72.0
Msa0956600 MtrunA17_Chr3g0135851 61.404 57 22 0 112 168 86 142 2.22e-13 72.0
Msa0956600 MtrunA17_Chr5g0416161 47.945 73 35 1 112 184 117 186 1.16e-12 70.1
Msa0956600 MtrunA17_Chr1g0172611 42.657 143 71 3 24 165 21 153 1.16e-11 66.2
Msa0956600 MtrunA17_Chr1g0156121 29.560 159 97 4 27 177 33 184 1.31e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0956600 AT5G62070.1 48.046 435 137 17 1 423 1 358 6.96e-62 206
Msa0956600 AT5G07240.1 44.671 441 134 19 1 423 1 349 8.73e-58 196
Msa0956600 AT5G07240.2 44.671 441 134 19 1 423 47 395 2.06e-57 196
Msa0956600 AT4G23060.1 35.519 366 176 14 109 456 160 483 2.64e-35 137
Msa0956600 AT1G01110.2 32.749 342 159 11 119 406 123 447 1.59e-27 115
Msa0956600 AT3G16490.1 33.837 331 126 9 89 411 90 335 1.85e-27 113
Msa0956600 AT4G00820.1 31.481 378 138 16 106 406 120 453 5.32e-23 102
Msa0956600 AT3G49260.1 59.740 77 31 0 109 185 112 188 5.98e-20 92.4
Msa0956600 AT3G49260.4 59.740 77 31 0 109 185 112 188 5.98e-20 92.4
Msa0956600 AT3G49260.2 59.740 77 31 0 109 185 112 188 5.98e-20 92.4
Msa0956600 AT3G49260.3 59.740 77 31 0 109 185 112 188 6.53e-20 92.4
Msa0956600 AT4G14750.1 60.563 71 26 1 114 182 100 170 9.48e-20 91.3
Msa0956600 AT4G14750.2 60.563 71 26 1 114 182 159 229 1.64e-19 90.9
Msa0956600 AT4G14750.3 60.563 71 26 1 114 182 159 229 1.84e-19 90.9
Msa0956600 AT4G29150.1 33.667 300 124 10 114 408 128 357 4.60e-19 89.4
Msa0956600 AT3G59690.2 27.707 314 154 10 120 408 172 437 6.29e-19 89.7
Msa0956600 AT3G59690.1 27.707 314 154 10 120 408 172 437 6.29e-19 89.7
Msa0956600 AT1G51960.1 61.972 71 27 0 115 185 98 168 1.29e-18 87.4
Msa0956600 AT3G52290.1 51.899 79 37 1 115 193 107 184 5.99e-18 86.3
Msa0956600 AT1G18840.1 33.784 148 90 4 112 252 105 251 2.73e-17 84.7
Msa0956600 AT1G18840.3 33.784 148 90 4 112 252 105 251 2.73e-17 84.7
Msa0956600 AT1G18840.2 33.784 148 90 4 112 252 105 251 2.73e-17 84.7
Msa0956600 AT5G03040.1 48.750 80 41 0 114 193 112 191 3.89e-17 84.0
Msa0956600 AT5G03040.3 48.750 80 41 0 114 193 112 191 3.89e-17 84.0
Msa0956600 AT5G03040.2 48.750 80 41 0 114 193 112 191 3.89e-17 84.0
Msa0956600 AT5G13460.1 50.685 73 36 0 115 187 109 181 2.80e-16 81.3
Msa0956600 AT1G17480.1 57.971 69 29 0 119 187 96 164 4.15e-16 80.1
Msa0956600 AT3G49380.1 39.735 151 60 4 25 175 49 168 4.31e-16 79.7
Msa0956600 AT3G22190.3 70.909 55 16 0 114 168 85 139 1.89e-15 78.6
Msa0956600 AT3G22190.2 70.909 55 16 0 114 168 85 139 1.89e-15 78.6
Msa0956600 AT3G22190.4 70.909 55 16 0 114 168 85 139 1.89e-15 78.6
Msa0956600 AT3G22190.1 70.909 55 16 0 114 168 85 139 1.89e-15 78.6
Msa0956600 AT2G43680.4 49.254 67 34 0 119 185 324 390 1.91e-15 79.3
Msa0956600 AT2G43680.2 49.254 67 34 0 119 185 324 390 1.91e-15 79.3
Msa0956600 AT2G43680.3 49.254 67 34 0 119 185 324 390 1.91e-15 79.3
Msa0956600 AT2G43680.5 49.254 67 34 0 119 185 324 390 1.91e-15 79.3
Msa0956600 AT2G43680.1 49.254 67 34 0 119 185 325 391 1.96e-15 79.3
Msa0956600 AT1G74690.1 52.055 73 34 1 112 184 109 180 3.65e-15 78.2
Msa0956600 AT1G72670.1 62.712 59 22 0 119 177 95 153 3.89e-15 77.4
Msa0956600 AT2G26180.1 61.538 65 24 1 104 168 72 135 1.18e-14 76.3
Msa0956600 AT4G10640.1 36.424 151 66 4 25 175 38 158 1.49e-14 75.9
Msa0956600 AT2G26410.2 45.570 79 43 0 105 183 136 214 1.13e-13 73.6
Msa0956600 AT2G26410.1 45.570 79 43 0 105 183 136 214 1.13e-13 73.6
Msa0956600 AT3G51380.1 60.606 66 25 1 115 180 36 100 2.07e-13 66.6
Msa0956600 AT3G09710.1 28.571 182 101 3 114 266 105 286 4.59e-12 68.2
Msa0956600 AT1G19870.1 33.333 144 77 6 112 247 208 340 7.94e-12 68.2
Msa0956600 AT1G19870.2 33.333 144 77 6 112 247 25 157 8.16e-12 67.8
Msa0956600 AT3G09710.2 43.662 71 40 0 114 184 105 175 3.29e-11 65.5
Msa0956600 AT5G03960.3 66.667 45 15 0 119 163 110 154 6.10e-11 64.7
Msa0956600 AT5G03960.2 66.667 45 15 0 119 163 110 154 6.10e-11 64.7
Msa0956600 AT5G03960.1 66.667 45 15 0 119 163 109 153 6.30e-11 64.3

Find 117 sgRNAs with CRISPR-Local

Find 450 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTGGTGGTGGGTGGTTC+TGG 0.175324 6_3:+64303088 None:intergenic
TTTGCAATGTCACCTTAAAT+TGG 0.238670 6_3:+64296254 None:intergenic
CATGGTGAGGTTTGTGTCAT+TGG 0.247724 6_3:+64303159 None:intergenic
GTCGGCTTTCCGAGGTTATT+TGG 0.252225 6_3:-64302768 Msa0956600:intron
TGGCAAATACTCAATCTTCT+AGG 0.255891 6_3:-64296452 Msa0956600:CDS
TTGGGAGTAGTACCAATTTA+AGG 0.275762 6_3:-64296266 Msa0956600:CDS
CTCTGGTTATCCTAGTTATA+TGG 0.278103 6_3:-64296472 Msa0956600:CDS
ATTCAAGGCCTTTGGGAATC+AGG 0.291166 6_3:-64296357 Msa0956600:CDS
GTGGTGGGTGGTTCTGGTGG+TGG 0.302950 6_3:+64303094 None:intergenic
CTAGGTCTATTCAAGGCCTT+TGG 0.325862 6_3:-64296365 Msa0956600:CDS
ACAAGTAGCTTGAACAGAAT+TGG 0.333286 6_3:-64296285 Msa0956600:CDS
GTTTCAAGTAACAATGGTTA+AGG 0.346348 6_3:-64295727 None:intergenic
CTAACCAATTTGAACCTAAC+CGG 0.349715 6_3:+64296904 None:intergenic
TGCAAGTCGTGTGCACATTT+CGG 0.350011 6_3:-64298229 Msa0956600:CDS
GTGGACTACTCTCGGCGGTT+CGG 0.368312 6_3:+64296592 None:intergenic
TCGATGAAGCGCCGCCGGTT+TGG 0.373360 6_3:+64296853 None:intergenic
AGGCTAGAGTTTGAGAGATA+TGG 0.377602 6_3:-64296396 Msa0956600:CDS
TTTGTGTCATTGGGTGGGAG+AGG 0.389039 6_3:+64303169 None:intergenic
GAGCCCGGTTAGGTTCAAAT+TGG 0.391331 6_3:-64296908 Msa0956600:CDS
CTACTAAAAGTGAGAGTTCA+TGG 0.413052 6_3:-64296512 Msa0956600:CDS
TTTCAAGTAACAATGGTTAA+GGG 0.414531 6_3:-64295726 None:intergenic
ATGGTGAGGTTTGTGTCATT+GGG 0.420016 6_3:+64303160 None:intergenic
AACTTTCTCCGACGACTCTT+CGG 0.424546 6_3:-64303136 Msa0956600:CDS
GAAAACACATGGAGCCAAAC+CGG 0.429881 6_3:-64296867 Msa0956600:CDS
GTGGTTCTGGTGGTGGATTA+CGG 0.433997 6_3:+64303101 None:intergenic
ATATAGTTCTGTAATTTGTA+TGG 0.436036 6_3:+64296139 None:intergenic
TAGGTCTATTCAAGGCCTTT+GGG 0.441659 6_3:-64296364 Msa0956600:CDS
ATTGGTGAAATTGCAAGCTT+TGG 0.450056 6_3:-64298334 Msa0956600:CDS
CAAGTAGCTTGAACAGAATT+GGG 0.453202 6_3:-64296284 Msa0956600:CDS
GTTCAAATTGGTTAGACAGT+TGG 0.455901 6_3:-64296896 Msa0956600:CDS
AGAGATATGGTTCATCTACT+AGG 0.456026 6_3:-64296383 Msa0956600:CDS
TTGGTGGTGGGTGGTTCTGG+TGG 0.458373 6_3:+64303091 None:intergenic
CATTGGTTCGACTTCAGTCT+CGG 0.466438 6_3:-64298257 Msa0956600:CDS
GTCTATAGTACGAAATTTGA+CGG 0.477335 6_3:-64297181 Msa0956600:CDS
TTGTGTCATTGGGTGGGAGA+GGG 0.481312 6_3:+64303170 None:intergenic
CTGTTCAAGCTACTTGTGGC+TGG 0.485442 6_3:+64296291 None:intergenic
TCAAACTCTAGCCTTTGTCT+TGG 0.489677 6_3:+64296405 None:intergenic
AAATTCTTGAAGTAGATACT+TGG 0.490960 6_3:-64296800 Msa0956600:CDS
TGCTGCTCATGCTGCCGCTG+AGG 0.492336 6_3:-64302903 Msa0956600:CDS
GGAACCGAAAAGTGAGTGTT+GGG 0.493066 6_3:-64296043 Msa0956600:three_prime_UTR
TACTCAATCTTCTAGGGCTA+AGG 0.493624 6_3:-64296445 Msa0956600:CDS
GACTGGTCGGAGACGGTTGT+CGG 0.496284 6_3:-64302819 Msa0956600:CDS
GTGAGGTTTGTGTCATTGGG+TGG 0.497056 6_3:+64303163 None:intergenic
AAGTATGAAATTAAGACAAA+AGG 0.500227 6_3:-64295762 Msa0956600:three_prime_UTR
TGAGGTTTGTGTCATTGGGT+GGG 0.500716 6_3:+64303164 None:intergenic
AGCGAGTGCAGCTTCAGCAA+CGG 0.500718 6_3:+64302925 None:intergenic
GAGTCGTCGGAGAAAGTTCA+TGG 0.504928 6_3:+64303141 None:intergenic
AGTGGGTGTTCATAATCATC+AGG 0.504957 6_3:+64297208 None:intergenic
TGAGTATTTGCCATATAACT+AGG 0.506933 6_3:+64296462 None:intergenic
TCAGAGAAAGAAGAAGTTGA+AGG 0.507739 6_3:+64302998 None:intergenic
TGGGTGGGAGAGGGTAATGA+GGG 0.513677 6_3:+64303179 None:intergenic
GGCAAATACTCAATCTTCTA+GGG 0.514783 6_3:-64296451 Msa0956600:CDS
ATTAAGAGCACTTAAAGCAT+TGG 0.515042 6_3:-64298352 Msa0956600:CDS
AGTAGCAGCAGCAACAGCAA+TGG 0.516750 6_3:+64302952 None:intergenic
TTCAAGGCCTTTGGGAATCA+GGG 0.517803 6_3:-64296356 Msa0956600:CDS
TTGGGTGGGAGAGGGTAATG+AGG 0.520121 6_3:+64303178 None:intergenic
ACGGCTGGTGGAAATTCTGC+TGG 0.520981 6_3:-64302860 Msa0956600:CDS
AATTCTGTTCAAGCTACTTG+TGG 0.522848 6_3:+64296287 None:intergenic
TGCTTCATAGAAGAGAGACT+TGG 0.525983 6_3:+64296648 None:intergenic
AACTTAGAAAGAGCCCGGTT+AGG 0.536800 6_3:-64296918 Msa0956600:CDS
CAAGACTCGAAAGTGGTTCG+AGG 0.538246 6_3:-64296551 Msa0956600:CDS
TACTAAAAGTGAGAGTTCAT+GGG 0.539030 6_3:-64296511 Msa0956600:CDS
GGACCTCGGACTCCGACGAC+TGG 0.539831 6_3:-64302836 Msa0956600:CDS
ATGTGGTCTTTGATAGTGTA+GGG 0.542279 6_3:+64295863 None:intergenic
ATGAATTTGGAAGGCAAGGA+GGG 0.543058 6_3:-64298376 Msa0956600:intron
TGTTAGACTAACAAGTAATA+CGG 0.543755 6_3:-64302879 Msa0956600:CDS
AATCTTCTAGGGCTAAGGTT+AGG 0.545081 6_3:-64296440 Msa0956600:CDS
GCTATAGAAGAGCGTTTCGA+CGG 0.545720 6_3:+64296678 None:intergenic
TCATCTACTAGGTCTATTCA+AGG 0.545942 6_3:-64296372 Msa0956600:CDS
ATTGGTTCGACTTCAGTCTC+GGG 0.550042 6_3:-64298256 Msa0956600:CDS
GCTTCTTCAAGACTCGAAAG+TGG 0.557955 6_3:-64296558 Msa0956600:CDS
AAATTGCAAGCTTTGGTGAG+AGG 0.564599 6_3:-64298327 Msa0956600:CDS
AAGATTCAGTCGGCTTTCCG+AGG 0.566154 6_3:-64302776 Msa0956600:CDS
CTCGGACTCCGACGACTGGT+CGG 0.566292 6_3:-64302832 Msa0956600:CDS
CTATGTTGTGATTTCAAATG+TGG 0.568605 6_3:+64296774 None:intergenic
AGGAACCGAAAAGTGAGTGT+TGG 0.568610 6_3:-64296044 Msa0956600:three_prime_UTR
TCGTACTATAGACGCGAAGT+GGG 0.572818 6_3:+64297191 None:intergenic
AATCATGAATACCTTGAGGA+TGG 0.574647 6_3:+64297153 None:intergenic
CTCGAAAGTGGTTCGAGGCG+AGG 0.574732 6_3:-64296546 Msa0956600:CDS
TGACGGATCTTCCATCCTCA+AGG 0.574798 6_3:-64297164 Msa0956600:intron
TCTTCTATGAAGCATCAGAA+AGG 0.575782 6_3:-64296639 Msa0956600:CDS
AACCGCCGAGAGTAGTCCAC+AGG 0.576504 6_3:-64296589 Msa0956600:CDS
TAAAATGTTTCAAGTAACAA+TGG 0.578859 6_3:-64295733 Msa0956600:three_prime_UTR
GAAATTCTGCTGGAGGACCT+CGG 0.579576 6_3:-64302850 Msa0956600:CDS
TTCGTACTATAGACGCGAAG+TGG 0.579588 6_3:+64297190 None:intergenic
CGACCAGTCGTCGGAGTCCG+AGG 0.580019 6_3:+64302833 None:intergenic
CAGAGAAAGAAGAAGTTGAA+GGG 0.585671 6_3:+64302999 None:intergenic
TATGAAATTAAGACAAAAGG+AGG 0.586332 6_3:-64295759 Msa0956600:three_prime_UTR
ACATGAACTTAGAAAGAGCC+CGG 0.588306 6_3:-64296923 Msa0956600:CDS
GAAAGCCGACTGAATCTTCA+CGG 0.590040 6_3:+64302781 None:intergenic
TGAATAATGATGTTGAAAAG+AGG 0.593176 6_3:+64296743 None:intergenic
AAATTGGTTAGACAGTTGGA+TGG 0.594225 6_3:-64296892 Msa0956600:CDS
CTAACAAGTAATACGGCTGG+TGG 0.594249 6_3:-64302872 Msa0956600:CDS
AAATGCCTGTGGACTACTCT+CGG 0.594597 6_3:+64296584 None:intergenic
GAGTGCAGCTTCAGCAACGG+CGG 0.594777 6_3:+64302928 None:intergenic
AACCGTCTCCGACCAGTCGT+CGG 0.595592 6_3:+64302824 None:intergenic
CACAAAGTGCTCCAAGACAA+AGG 0.601702 6_3:-64296416 Msa0956600:CDS
AGACTAACAAGTAATACGGC+TGG 0.605995 6_3:-64302875 Msa0956600:CDS
TAACCAATTTGAACCTAACC+GGG 0.608700 6_3:+64296905 None:intergenic
TGGGAGAGGGTAATGAGGGA+AGG 0.609898 6_3:+64303183 None:intergenic
AACACATGGAGCCAAACCGG+CGG 0.614080 6_3:-64296864 Msa0956600:CDS
TGCTGCCGTGAAGATTCAGT+CGG 0.618990 6_3:-64302786 Msa0956600:CDS
TATGAATTTGGAAGGCAAGG+AGG 0.623814 6_3:-64298377 Msa0956600:intron
GCTAAGACGAATGCAAACAT+TGG 0.623828 6_3:-64298274 Msa0956600:CDS
CATGTGGTCTTTGATAGTGT+AGG 0.632553 6_3:+64295862 None:intergenic
GTCGGAGAAAGTTCATGGTG+AGG 0.635606 6_3:+64303146 None:intergenic
CTACACTATCAAAGACCACA+TGG 0.636585 6_3:-64295861 Msa0956600:three_prime_UTR
TTTCTCCGACGACTCTTCGG+CGG 0.651007 6_3:-64303133 Msa0956600:CDS
ACTAAAAGTGAGAGTTCATG+GGG 0.653519 6_3:-64296510 Msa0956600:CDS
GCTGGTGGAAATTCTGCTGG+AGG 0.657689 6_3:-64302857 Msa0956600:CDS
AATTAGACCCTGATTCCCAA+AGG 0.667307 6_3:+64296349 None:intergenic
TGTTACATACCAAATAACCT+CGG 0.675147 6_3:+64302759 None:intergenic
GTTGGATGGAAGAAAACACA+TGG 0.681144 6_3:-64296878 Msa0956600:CDS
ATGGACTGAAACATGAGTGT+AGG 0.695801 6_3:+64296158 None:intergenic
TGTTAGTCTAACAACCTCAG+CGG 0.733864 6_3:+64302889 None:intergenic
AAAGTCAAAAGTCAACCATG+TGG 0.740937 6_3:+64295846 None:intergenic
TGCCTGTGGACTACTCTCGG+CGG 0.763952 6_3:+64296587 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACTTATTTAATGAATTTTA+TGG + chr6_3:64297300-64297319 None:intergenic 10.0%
!!! AGAGTTTTTTTTTTTTTTTT+AGG - chr6_3:64297753-64297772 Msa0956600:intron 10.0%
!!! GAGTTTTTTTTTTTTTTTTA+GGG - chr6_3:64297754-64297773 Msa0956600:intron 10.0%
!!! TATCTTATGTTAAATTTTAT+AGG - chr6_3:64297821-64297840 Msa0956600:intron 10.0%
!! TTATTTATTTAGATATATGT+TGG - chr6_3:64298132-64298151 Msa0956600:intron 10.0%
!! TGTTTAAAAAAAAAAATACT+TGG - chr6_3:64298223-64298242 Msa0956600:CDS 10.0%
!! TAATTGTATTAATTTAGATT+AGG - chr6_3:64299141-64299160 Msa0956600:intron 10.0%
!!! ATTTTTTTATTAGTTATGAA+TGG - chr6_3:64300045-64300064 Msa0956600:intron 10.0%
!!! TTTTTTTATTAGTTATGAAT+GGG - chr6_3:64300046-64300065 Msa0956600:intron 10.0%
!!! TTCATATAACATTTTAATAA+TGG + chr6_3:64300342-64300361 None:intergenic 10.0%
!!! TAAACATAGAAATTTTTTAT+TGG - chr6_3:64300434-64300453 Msa0956600:intron 10.0%
!!! TATAAATTTAGGTATAATTT+TGG - chr6_3:64301536-64301555 Msa0956600:intron 10.0%
!!! TTACAATAATGAAAATTTTA+TGG - chr6_3:64302233-64302252 Msa0956600:intron 10.0%
!! AATAAATTTAATCCTAAAAA+AGG - chr6_3:64302959-64302978 Msa0956600:CDS 10.0%
!!! TATTATAATAGTTTTTCTTA+GGG - chr6_3:64303024-64303043 Msa0956600:CDS 10.0%
!!! TTATTTCTCATAAAAAGAAT+CGG + chr6_3:64296277-64296296 None:intergenic 15.0%
!! ATCGAGTTTAAAAAAAAAAT+TGG - chr6_3:64296428-64296447 Msa0956600:CDS 15.0%
!!! TATTTTTTAACAGAATTTGA+AGG - chr6_3:64296499-64296518 Msa0956600:CDS 15.0%
!!! CCTTCAATTTTTTTTTTTAA+TGG + chr6_3:64296533-64296552 None:intergenic 15.0%
!! CCATTAAAAAAAAAAATTGA+AGG - chr6_3:64296530-64296549 Msa0956600:CDS 15.0%
!! AACTAAAAAGTAATTAATGA+TGG - chr6_3:64297206-64297225 Msa0956600:CDS 15.0%
!! CATTTAATAAATGATGTATT+TGG + chr6_3:64297402-64297421 None:intergenic 15.0%
!! AAAGAATAAAAAACTAAGTA+TGG + chr6_3:64297568-64297587 None:intergenic 15.0%
!!! CATATTTTGTGTAATTTTTT+TGG + chr6_3:64298793-64298812 None:intergenic 15.0%
!!! TTTTAAATCAATGATTCATA+AGG + chr6_3:64299050-64299069 None:intergenic 15.0%
!!! AAATTAAATGATCTACATTT+TGG - chr6_3:64299067-64299086 Msa0956600:intron 15.0%
!!! TGGTTTTGTATTTTTAATTT+TGG - chr6_3:64299087-64299106 Msa0956600:intron 15.0%
!!! ATTTTATAATGTAAGGTAAA+AGG + chr6_3:64299206-64299225 None:intergenic 15.0%
!!! GAATATCATTTTATAATGTA+AGG + chr6_3:64299213-64299232 None:intergenic 15.0%
!!! TTTTTTTACAAAAAGAAATG+AGG + chr6_3:64299377-64299396 None:intergenic 15.0%
!! ATTATTTCATCTCAAATTAA+TGG + chr6_3:64299455-64299474 None:intergenic 15.0%
!! AAGGTAATAGTATATTAAAA+GGG + chr6_3:64299732-64299751 None:intergenic 15.0%
!! TAAGGTAATAGTATATTAAA+AGG + chr6_3:64299733-64299752 None:intergenic 15.0%
!! ATAATGCACAAATATTTATA+AGG - chr6_3:64299951-64299970 Msa0956600:intron 15.0%
!! ATAAAAACAAAACATTATCA+AGG - chr6_3:64300005-64300024 Msa0956600:intron 15.0%
!!! TCAAGGTTTTATAATTTATT+TGG - chr6_3:64300022-64300041 Msa0956600:intron 15.0%
!!! GTTTGTTACATAATAAAATT+AGG + chr6_3:64300187-64300206 None:intergenic 15.0%
!! TTCCAAATTCATATAAAAAA+GGG + chr6_3:64300561-64300580 None:intergenic 15.0%
!!! CTTTTAACCTTTTTTTTTAA+AGG - chr6_3:64301159-64301178 Msa0956600:intron 15.0%
!!! AAAGTATCCTTTAAAAAAAA+AGG + chr6_3:64301169-64301188 None:intergenic 15.0%
!! ATAAGAGAAAATATAGAAAA+AGG + chr6_3:64301220-64301239 None:intergenic 15.0%
!!! AAAGTATTATTCTTTAGATA+AGG - chr6_3:64301344-64301363 Msa0956600:intron 15.0%
!!! TCTAATTTTAGAAACTAAAT+TGG + chr6_3:64301420-64301439 None:intergenic 15.0%
!! TACCTAAATTTATAAATCAT+CGG + chr6_3:64301530-64301549 None:intergenic 15.0%
!! ATTTAAAGAAAAAAAATCAG+AGG + chr6_3:64301706-64301725 None:intergenic 15.0%
!!! GTATTATAATAGTTTTTCTT+AGG - chr6_3:64303023-64303042 Msa0956600:CDS 15.0%
!! TAACTGTGAATAATATTTCA+AGG + chr6_3:64296222-64296241 None:intergenic 20.0%
!!! AAGTAACATTTTTACTATGT+TGG + chr6_3:64296251-64296270 None:intergenic 20.0%
!! GTCAATAAAATTGATGTATT+TGG - chr6_3:64296301-64296320 Msa0956600:CDS 20.0%
!! TATGAACAAAATACATATGA+TGG - chr6_3:64296331-64296350 Msa0956600:CDS 20.0%
!! TCAACAATTCAATTCTTTAA+TGG + chr6_3:64296561-64296580 None:intergenic 20.0%
!!! AGAATTGAATTGTTGATTTT+AGG - chr6_3:64296565-64296584 Msa0956600:CDS 20.0%
!! AGGTAGTTATAGTTATTAAT+TGG - chr6_3:64296594-64296613 Msa0956600:CDS 20.0%
!! CTCAATTAAAAGAACAATAA+TGG + chr6_3:64296620-64296639 None:intergenic 20.0%
!! AAAATTTAAAGAGTGACTAT+TGG - chr6_3:64296664-64296683 Msa0956600:CDS 20.0%
!!! TTTCGTATCAAGAATAATTT+TGG - chr6_3:64296689-64296708 Msa0956600:CDS 20.0%
!! TTCAACTAGAAAAATAGAAT+GGG + chr6_3:64296922-64296941 None:intergenic 20.0%
!! TTTCAACTAGAAAAATAGAA+TGG + chr6_3:64296923-64296942 None:intergenic 20.0%
!!! CTATTTTTCTAGTTGAAAAT+TGG - chr6_3:64296925-64296944 Msa0956600:CDS 20.0%
!! TAAAAAGTAATTAATGATGG+TGG - chr6_3:64297209-64297228 Msa0956600:CDS 20.0%
!! AAAAAGTAATTAATGATGGT+GGG - chr6_3:64297210-64297229 Msa0956600:CDS 20.0%
!!! TAAGCAAAAGTTGATTTTTT+AGG + chr6_3:64297427-64297446 None:intergenic 20.0%
!!! ATGTGTCAAAATCAAAATTT+TGG + chr6_3:64297599-64297618 None:intergenic 20.0%
!! AATAGAATTTCCAAAATCAT+TGG - chr6_3:64298193-64298212 Msa0956600:CDS 20.0%
!!! TGTAATTTTTTTGGTACAAA+TGG + chr6_3:64298784-64298803 None:intergenic 20.0%
!! AAATTACACAAAATATGAAG+TGG - chr6_3:64298796-64298815 Msa0956600:intron 20.0%
!!! TTCAACTACATTGATTAATA+GGG + chr6_3:64298891-64298910 None:intergenic 20.0%
!!! TAATGTTTTTTCAACTTTTG+CGG - chr6_3:64299330-64299349 Msa0956600:intron 20.0%
!! GAGATTACTAAATTATTACT+AGG - chr6_3:64299541-64299560 Msa0956600:intron 20.0%
!!! ATAAAAAAGAGCATTGATAA+TGG - chr6_3:64299626-64299645 Msa0956600:intron 20.0%
!!! TAAGTCATATTAGTTTATCT+TGG - chr6_3:64299875-64299894 Msa0956600:intron 20.0%
!! CTAAAACCAAATCAATTATT+TGG - chr6_3:64299975-64299994 Msa0956600:intron 20.0%
!! ACAAATCCAAATAATTGATT+TGG + chr6_3:64299984-64300003 None:intergenic 20.0%
!!! TTTGACTGATGTTTTTTTAT+AGG - chr6_3:64300371-64300390 Msa0956600:intron 20.0%
!! ACAAGTTAAGAAACTAAAAA+TGG + chr6_3:64300528-64300547 None:intergenic 20.0%
!! CTTCCAAATTCATATAAAAA+AGG + chr6_3:64300562-64300581 None:intergenic 20.0%
!!! CTTTTTTATATGAATTTGGA+AGG - chr6_3:64300560-64300579 Msa0956600:intron 20.0%
!!! AATTTACACCAAACTTTTAA+AGG - chr6_3:64300928-64300947 Msa0956600:intron 20.0%
!!! ATATTCAACCTTTAAAAGTT+TGG + chr6_3:64300939-64300958 None:intergenic 20.0%
!!! TTGCTATTTTGTAAATTTGA+TGG - chr6_3:64300989-64301008 Msa0956600:intron 20.0%
!! AAAAAAGTAAATTAGCAGTT+TGG + chr6_3:64301050-64301069 None:intergenic 20.0%
!! CTTATCTTAGTAAAAGTTTA+TGG - chr6_3:64301098-64301117 Msa0956600:intron 20.0%
!!! GTTTCTAAAATTAGAAAAGT+CGG - chr6_3:64301425-64301444 Msa0956600:intron 20.0%
!! TGAAATATACAAAATTCTCA+AGG - chr6_3:64301455-64301474 Msa0956600:intron 20.0%
!! GAAATATACAAAATTCTCAA+GGG - chr6_3:64301456-64301475 Msa0956600:intron 20.0%
!!! ATTGTAAGGATTTGATAATT+TGG + chr6_3:64301616-64301635 None:intergenic 20.0%
!!! TTTTTTCTTTAAATTGTTGC+AGG - chr6_3:64301712-64301731 Msa0956600:intron 20.0%
!!! AATCGAGTAAATTGAATTTT+AGG + chr6_3:64301822-64301841 None:intergenic 20.0%
!!! ACTTAAATAGTTTTTGAGTA+TGG - chr6_3:64301882-64301901 Msa0956600:intron 20.0%
!!! ATATAGTTCTGTAATTTGTA+TGG + chr6_3:64302809-64302828 None:intergenic 20.0%
!!! GTACTTTTTTTACAATTTGT+AGG - chr6_3:64302881-64302900 Msa0956600:CDS 20.0%
!! AAGTATGAAATTAAGACAAA+AGG - chr6_3:64303183-64303202 Msa0956600:five_prime_UTR 20.0%
!!! TAAAATGTTTCAAGTAACAA+TGG - chr6_3:64303212-64303231 Msa0956600:five_prime_UTR 20.0%
!!! TGTTCTTTTGTCTTTTTTGT+TGG + chr6_3:64295876-64295895 None:intergenic 25.0%
! ACAAAAAAGACAAAAGAACA+TGG - chr6_3:64295876-64295895 Msa0956600:three_prime_UTR 25.0%
! TGTTAGACTAACAAGTAATA+CGG - chr6_3:64296066-64296085 Msa0956600:three_prime_UTR 25.0%
!! ATATTTTGTGAGTGTGTAAA+TGG - chr6_3:64296836-64296855 Msa0956600:CDS 25.0%
! AGTAAAAAAGAAAAGAGAAC+CGG + chr6_3:64297036-64297055 None:intergenic 25.0%
!! AAGAGCATGTTAATCTAATA+TGG + chr6_3:64297066-64297085 None:intergenic 25.0%
!! GTCAATGAATTTCATTTTGA+AGG + chr6_3:64297112-64297131 None:intergenic 25.0%
!! ATTTTATGGAGTATGCAATT+TGG + chr6_3:64297286-64297305 None:intergenic 25.0%
!! ATTTTGCTTATAATAGTGAC+CGG + chr6_3:64297329-64297348 None:intergenic 25.0%
! ATCAGTCATACATTTCATTA+AGG - chr6_3:64297985-64298004 Msa0956600:intron 25.0%
! TCAGTCATACATTTCATTAA+GGG - chr6_3:64297986-64298005 Msa0956600:intron 25.0%
! TCACAATACTTTCCTTTAAT+AGG - chr6_3:64298029-64298048 Msa0956600:intron 25.0%
! ATACTAGATCTACCTATTAA+AGG + chr6_3:64298044-64298063 None:intergenic 25.0%
! TGGTCAAATAAGTTTGATAT+AGG - chr6_3:64298243-64298262 Msa0956600:CDS 25.0%
! AAATAAGTTTGATATAGGCT+AGG - chr6_3:64298248-64298267 Msa0956600:CDS 25.0%
! CACACTTATATTCCAAAAAT+GGG + chr6_3:64298611-64298630 None:intergenic 25.0%
! ACACACTTATATTCCAAAAA+TGG + chr6_3:64298612-64298631 None:intergenic 25.0%
!!! ATCAACCATGTTTTAGATAA+TGG - chr6_3:64298836-64298855 Msa0956600:intron 25.0%
!!! TCAACCATGTTTTAGATAAT+GGG - chr6_3:64298837-64298856 Msa0956600:intron 25.0%
! TAATAACCTATATAGCACTT+TGG + chr6_3:64298863-64298882 None:intergenic 25.0%
!! AAAGTGCTATATAGGTTATT+AGG - chr6_3:64298862-64298881 Msa0956600:intron 25.0%
!! CTTCAACTACATTGATTAAT+AGG + chr6_3:64298892-64298911 None:intergenic 25.0%
!!! GTAGTTACTAGTTTCATTTT+TGG - chr6_3:64298916-64298935 Msa0956600:intron 25.0%
!!! TTACTAGTTTCATTTTTGGT+AGG - chr6_3:64298920-64298939 Msa0956600:intron 25.0%
!!! TACTAGTTTCATTTTTGGTA+GGG - chr6_3:64298921-64298940 Msa0956600:intron 25.0%
! AAGCATTATAGCCTAATTAA+AGG + chr6_3:64299281-64299300 None:intergenic 25.0%
! AATGAGGATTCACTTATTAA+TGG + chr6_3:64299361-64299380 None:intergenic 25.0%
! TTTAATATGTGCACTTACAA+CGG + chr6_3:64299423-64299442 None:intergenic 25.0%
! TGACATTAATTTAGATCAGA+TGG - chr6_3:64299514-64299533 Msa0956600:intron 25.0%
! TAGTAAACACATTTACATAG+TGG + chr6_3:64299660-64299679 None:intergenic 25.0%
!! TGTTCCCTATTTTCTATTTT+AGG - chr6_3:64299772-64299791 Msa0956600:intron 25.0%
! CAAGCCTAAAATAGAAAATA+GGG + chr6_3:64299779-64299798 None:intergenic 25.0%
! TCAAGCCTAAAATAGAAAAT+AGG + chr6_3:64299780-64299799 None:intergenic 25.0%
!!! TTTTTGGTACTTGTTGATTT+AGG - chr6_3:64299845-64299864 Msa0956600:intron 25.0%
! AACATCAATGTTTCATATCT+TGG - chr6_3:64299916-64299935 Msa0956600:intron 25.0%
! ACATCAATGTTTCATATCTT+GGG - chr6_3:64299917-64299936 Msa0956600:intron 25.0%
!!! TATTCTTTGCATTTTTTCCT+TGG - chr6_3:64300211-64300230 Msa0956600:intron 25.0%
!!! ATTCTTTGCATTTTTTCCTT+GGG - chr6_3:64300212-64300231 Msa0956600:intron 25.0%
! TGAGTAAGAAAAAACTCTAA+TGG - chr6_3:64300290-64300309 Msa0956600:intron 25.0%
!!! AAAATGTTAATTTGTGCCTT+TGG - chr6_3:64300394-64300413 Msa0956600:intron 25.0%
!!! AAATGTTAATTTGTGCCTTT+GGG - chr6_3:64300395-64300414 Msa0956600:intron 25.0%
!!! GACCCTTTTTTATATGAATT+TGG - chr6_3:64300556-64300575 Msa0956600:intron 25.0%
!!! TTAAGTTTGATTTGCTTACA+GGG + chr6_3:64300779-64300798 None:intergenic 25.0%
!!! ATTAAGTTTGATTTGCTTAC+AGG + chr6_3:64300780-64300799 None:intergenic 25.0%
! TTTGGTACTAAAAATTCCAA+GGG + chr6_3:64301032-64301051 None:intergenic 25.0%
!! AAAAGTTTATGGTAACTTGT+TGG - chr6_3:64301109-64301128 Msa0956600:intron 25.0%
!!! AGAAAAAGGCATTTTTTAAG+AGG + chr6_3:64301206-64301225 None:intergenic 25.0%
! AAAATATCATGTTGCAAACT+AGG - chr6_3:64301313-64301332 Msa0956600:intron 25.0%
! TATTCTTTAGATAAGGCTTT+AGG - chr6_3:64301351-64301370 Msa0956600:intron 25.0%
! GACCGATGATTTATAAATTT+AGG - chr6_3:64301525-64301544 Msa0956600:intron 25.0%
! TATCAAATCCTTACAATTTG+AGG - chr6_3:64301619-64301638 Msa0956600:intron 25.0%
! ATCAAATCCTTACAATTTGA+GGG - chr6_3:64301620-64301639 Msa0956600:intron 25.0%
! AAATTCTTGAAGTAGATACT+TGG - chr6_3:64302145-64302164 Msa0956600:intron 25.0%
! TGAATAATGATGTTGAAAAG+AGG + chr6_3:64302205-64302224 None:intergenic 25.0%
!! CAGAAATAGATTCTGATTTT+AGG - chr6_3:64302619-64302638 Msa0956600:intron 25.0%
!! ATTGCAAATTTTATGGAAGA+AGG - chr6_3:64302706-64302725 Msa0956600:intron 25.0%
!! TTGCAAATTTTATGGAAGAA+GGG - chr6_3:64302707-64302726 Msa0956600:intron 25.0%
! TATGAAATTAAGACAAAAGG+AGG - chr6_3:64303186-64303205 Msa0956600:five_prime_UTR 25.0%
!! TCTTTTGTCTTTTTTGTTGG+TGG + chr6_3:64295873-64295892 None:intergenic 30.0%
TGTTACATACCAAATAACCT+CGG + chr6_3:64296189-64296208 None:intergenic 30.0%
TTTCTCATAAAAAGAATCGG+AGG + chr6_3:64296274-64296293 None:intergenic 30.0%
! CAATTTTATTGCTCGCTAAA+TGG + chr6_3:64296386-64296405 None:intergenic 30.0%
CATTTAGCGAGCAATAAAAT+TGG - chr6_3:64296384-64296403 Msa0956600:CDS 30.0%
!!! GAATTGTTGATTTTAGGTGA+TGG - chr6_3:64296571-64296590 Msa0956600:CDS 30.0%
!!! ATTTTGGAGTAATGTTTGTG+TGG - chr6_3:64296705-64296724 Msa0956600:CDS 30.0%
! TGCTTTGTAATTTTCAACAC+CGG - chr6_3:64297014-64297033 Msa0956600:intron 30.0%
!! TTTTGAAGGAGACAAAGAAT+TGG + chr6_3:64297098-64297117 None:intergenic 30.0%
GACTTAAGATCCTCTTTATT+TGG - chr6_3:64297129-64297148 Msa0956600:intron 30.0%
CATTAAATAAGTATTCCCTC+CGG - chr6_3:64297307-64297326 Msa0956600:intron 30.0%
! CTTTTGCTTATAATAGTGAC+CGG - chr6_3:64297437-64297456 Msa0956600:intron 30.0%
!!! AACTTAGGACCATTAGTTTT+TGG - chr6_3:64297654-64297673 Msa0956600:intron 30.0%
!!! AACCTTTTTTACTACTGCTA+TGG - chr6_3:64297874-64297893 Msa0956600:intron 30.0%
TACCATAGCAGTAGTAAAAA+AGG + chr6_3:64297879-64297898 None:intergenic 30.0%
!! CATTAAGGGTATCATTAGTT+AGG - chr6_3:64298000-64298019 Msa0956600:intron 30.0%
AATATTCAGACTTGAGAGTT+GGG + chr6_3:64298077-64298096 None:intergenic 30.0%
AAATATTCAGACTTGAGAGT+TGG + chr6_3:64298078-64298097 None:intergenic 30.0%
! TAGATATATGTTGGTCTATG+AGG - chr6_3:64298141-64298160 Msa0956600:intron 30.0%
! ACAAACAAGTCCAATGATTT+TGG + chr6_3:64298206-64298225 None:intergenic 30.0%
!!! GGTGTAACTTATTTTGATCA+CGG - chr6_3:64298290-64298309 Msa0956600:CDS 30.0%
!! TGGGATTTTAGAAATAGTTG+AGG + chr6_3:64298330-64298349 None:intergenic 30.0%
!! CCATTTTTAACGGCTAAAAT+CGG + chr6_3:64298431-64298450 None:intergenic 30.0%
!! TCCGGATATACCATTTTTAA+CGG + chr6_3:64298441-64298460 None:intergenic 30.0%
TTAAAAATGGTATATCCGGA+CGG - chr6_3:64298441-64298460 Msa0956600:intron 30.0%
ATTGGAGTTGTCAAAATAGT+TGG - chr6_3:64298465-64298484 Msa0956600:intron 30.0%
TTGGAGTTGTCAAAATAGTT+GGG - chr6_3:64298466-64298485 Msa0956600:intron 30.0%
TCAGCTTCATCATTTATCTT+TGG + chr6_3:64298582-64298601 None:intergenic 30.0%
AGGACCATAACAATTAAAGA+AGG - chr6_3:64298645-64298664 Msa0956600:intron 30.0%
ACCATAACAATTAAAGAAGG+TGG - chr6_3:64298648-64298667 Msa0956600:intron 30.0%
TCATAACACACAAAATACGT+GGG + chr6_3:64298730-64298749 None:intergenic 30.0%
ATCATAACACACAAAATACG+TGG + chr6_3:64298731-64298750 None:intergenic 30.0%
!! TTCTCTAAAACCATACTTTG+TGG - chr6_3:64299164-64299183 Msa0956600:intron 30.0%
!! TCTCTAAAACCATACTTTGT+GGG - chr6_3:64299165-64299184 Msa0956600:intron 30.0%
AGAGAAAGCAACTAACTTTA+AGG - chr6_3:64299246-64299265 Msa0956600:intron 30.0%
AGGATTCACTTATTAATGGT+TGG + chr6_3:64299357-64299376 None:intergenic 30.0%
! ACTTTTACACCACTTACATT+GGG + chr6_3:64299575-64299594 None:intergenic 30.0%
AATGTAAGTGGTGTAAAAGT+GGG - chr6_3:64299575-64299594 Msa0956600:intron 30.0%
AAAATAGGGTTGAAGCTTAT+GGG + chr6_3:64299692-64299711 None:intergenic 30.0%
AGACATAAAGAGGGAAAATA+GGG + chr6_3:64299706-64299725 None:intergenic 30.0%
ATAAGCATGGAATGTCAATA+AGG + chr6_3:64299751-64299770 None:intergenic 30.0%
AAATAGGGAACAAATAAGCA+TGG + chr6_3:64299764-64299783 None:intergenic 30.0%
!!! ACTTAAGTTTTTGGCAATGT+TGG - chr6_3:64299802-64299821 Msa0956600:intron 30.0%
! TATCTTGGTGTAAGTCATAT+TGG - chr6_3:64299890-64299909 Msa0956600:intron 30.0%
CATCAATGTTTCATATCTTG+GGG - chr6_3:64299918-64299937 Msa0956600:intron 30.0%
ATCAATGTTTCATATCTTGG+GGG - chr6_3:64299919-64299938 Msa0956600:intron 30.0%
! GAAGCATAATTTAAAACCCA+AGG + chr6_3:64300231-64300250 None:intergenic 30.0%
CATCATTCGACTTCTTAATA+GGG + chr6_3:64300272-64300291 None:intergenic 30.0%
TCATCATTCGACTTCTTAAT+AGG + chr6_3:64300273-64300292 None:intergenic 30.0%
!! AATGTTAATTTGTGCCTTTG+GGG - chr6_3:64300396-64300415 Msa0956600:intron 30.0%
CATATAAAAAAGGGTCATGT+GGG + chr6_3:64300552-64300571 None:intergenic 30.0%
TCATATAAAAAAGGGTCATG+TGG + chr6_3:64300553-64300572 None:intergenic 30.0%
TTATATGAATTTGGAAGGCA+AGG - chr6_3:64300565-64300584 Msa0956600:intron 30.0%
!! ATTAAGAGCACTTAAAGCAT+TGG - chr6_3:64300593-64300612 Msa0956600:intron 30.0%
ACCAACATTTACGATTTCAA+TGG + chr6_3:64300829-64300848 None:intergenic 30.0%
!!! TGATTCCGCAAAAGATTTTT+TGG - chr6_3:64300965-64300984 Msa0956600:intron 30.0%
! GCAAACCAAAAAATCTTTTG+CGG + chr6_3:64300973-64300992 None:intergenic 30.0%
GTTTGGTACTAAAAATTCCA+AGG + chr6_3:64301033-64301052 None:intergenic 30.0%
TTGTTGGAAAAGCTATGTAA+TGG - chr6_3:64301125-64301144 Msa0956600:intron 30.0%
GTAGGCATCATCATATAATT+TGG + chr6_3:64301582-64301601 None:intergenic 30.0%
ATTTAGTCCCTCAAATTGTA+AGG + chr6_3:64301630-64301649 None:intergenic 30.0%
GTCTATAGTACGAAATTTGA+CGG - chr6_3:64301764-64301783 Msa0956600:intron 30.0%
CGATTCATAGATGATTTACA+TGG - chr6_3:64301837-64301856 Msa0956600:intron 30.0%
AGTATACATGTAACATGTGT+TGG - chr6_3:64301928-64301947 Msa0956600:intron 30.0%
CTATGTTGTGATTTCAAATG+TGG + chr6_3:64302174-64302193 None:intergenic 30.0%
!! TCACTTTTAGTAGGTGTAAA+AGG + chr6_3:64302426-64302445 None:intergenic 30.0%
TACTAAAAGTGAGAGTTCAT+GGG - chr6_3:64302434-64302453 Msa0956600:intron 30.0%
TGAGTATTTGCCATATAACT+AGG + chr6_3:64302486-64302505 None:intergenic 30.0%
TTTGCAATGTCACCTTAAAT+TGG + chr6_3:64302694-64302713 None:intergenic 30.0%
! AGGTGACATTGCAAATTTTA+TGG - chr6_3:64302699-64302718 Msa0956600:intron 30.0%
! TGCAAATTTTATGGAAGAAG+GGG - chr6_3:64302708-64302727 Msa0956600:intron 30.0%
!! ATGCTTTTTATTTCCTGAAG+AGG - chr6_3:64302827-64302846 Msa0956600:CDS 30.0%
!!! TCTCTTCAAGTTCCTTTTTT+AGG + chr6_3:64302974-64302993 None:intergenic 30.0%
!!! TTGTCTTTTTTGTTGGTGGT+GGG + chr6_3:64295869-64295888 None:intergenic 35.0%
!!! TTTGTCTTTTTTGTTGGTGG+TGG + chr6_3:64295870-64295889 None:intergenic 35.0%
! TGAAGGGTCAGAATTTTTGT+TGG + chr6_3:64295933-64295952 None:intergenic 35.0%
CAGAGAAAGAAGAAGTTGAA+GGG + chr6_3:64295949-64295968 None:intergenic 35.0%
TCAGAGAAAGAAGAAGTTGA+AGG + chr6_3:64295950-64295969 None:intergenic 35.0%
TTGGTCTACCTTAGTTGTTT+CGG - chr6_3:64296403-64296422 Msa0956600:CDS 35.0%
AGAGTAGACAAAAAGATGTG+AGG - chr6_3:64296473-64296492 Msa0956600:CDS 35.0%
!!! TTGTTGATTTTAGGTGATGG+AGG - chr6_3:64296574-64296593 Msa0956600:CDS 35.0%
GGAGAGAATACCAAATAAAG+AGG + chr6_3:64297142-64297161 None:intergenic 35.0%
TTCTCTCCATTTCATCCATT+TGG - chr6_3:64297154-64297173 Msa0956600:intron 35.0%
ATCTCTCCAAATGGATGAAA+TGG + chr6_3:64297163-64297182 None:intergenic 35.0%
TGTGTCTATATCTCTCCAAA+TGG + chr6_3:64297172-64297191 None:intergenic 35.0%
! ACTATGGAGTACAGTGTTTT+AGG - chr6_3:64297477-64297496 Msa0956600:intron 35.0%
!! CTATTCTAAGGCAAAGTTGT+CGG + chr6_3:64297514-64297533 None:intergenic 35.0%
! TGCCTTAGAATAGTGTCATT+TGG - chr6_3:64297521-64297540 Msa0956600:intron 35.0%
GTCCAAATGACACTATTCTA+AGG + chr6_3:64297526-64297545 None:intergenic 35.0%
! GTTTGCACTTGTTAGAACTT+AGG - chr6_3:64297639-64297658 Msa0956600:intron 35.0%
ATACACGCACCAAAAACTAA+TGG + chr6_3:64297666-64297685 None:intergenic 35.0%
TAAGTTACACCTTCTGACAA+AGG + chr6_3:64298281-64298300 None:intergenic 35.0%
TGAAAATGTACATCCAGAGT+GGG + chr6_3:64298354-64298373 None:intergenic 35.0%
! TCTGGATGTACATTTTCAGA+TGG - chr6_3:64298356-64298375 Msa0956600:CDS 35.0%
!! CCGATTTTAGCCGTTAAAAA+TGG - chr6_3:64298428-64298447 Msa0956600:intron 35.0%
GCCGTTAAAAATGGTATATC+CGG - chr6_3:64298437-64298456 Msa0956600:intron 35.0%
TGGAGTTGTCAAAATAGTTG+GGG - chr6_3:64298467-64298486 Msa0956600:intron 35.0%
! AGCTGAAAATGACCCATTTT+TGG - chr6_3:64298596-64298615 Msa0956600:intron 35.0%
GCCACCTTCTTTAATTGTTA+TGG + chr6_3:64298652-64298671 None:intergenic 35.0%
ACAATTAAAGAAGGTGGCAA+AGG - chr6_3:64298654-64298673 Msa0956600:intron 35.0%
CAATTAAAGAAGGTGGCAAA+GGG - chr6_3:64298655-64298674 Msa0956600:intron 35.0%
CATAACACACAAAATACGTG+GGG + chr6_3:64298729-64298748 None:intergenic 35.0%
TGTTATGATGCTTTCCATTC+TGG - chr6_3:64298742-64298761 Msa0956600:intron 35.0%
GTTATGATGCTTTCCATTCT+GGG - chr6_3:64298743-64298762 Msa0956600:intron 35.0%
TACAAATGGACATACCTTTC+TGG + chr6_3:64298770-64298789 None:intergenic 35.0%
!! CTAAAACATGGTTGATGATG+TGG + chr6_3:64298832-64298851 None:intergenic 35.0%
! TTGGCCCATTATCTAAAACA+TGG + chr6_3:64298844-64298863 None:intergenic 35.0%
GTAGGGCATGTTATTATATG+TGG - chr6_3:64298938-64298957 Msa0956600:intron 35.0%
! ATGAAGCTTGAAGTCAGTTT+TGG - chr6_3:64299002-64299021 Msa0956600:intron 35.0%
!! CTCTAAAACCATACTTTGTG+GGG - chr6_3:64299166-64299185 Msa0956600:intron 35.0%
! TCTAAAACCATACTTTGTGG+GGG - chr6_3:64299167-64299186 Msa0956600:intron 35.0%
!!! TTTTTTACCCCCACAAAGTA+TGG + chr6_3:64299177-64299196 None:intergenic 35.0%
! CACTTTTACACCACTTACAT+TGG + chr6_3:64299576-64299595 None:intergenic 35.0%
CAATGTAAGTGGTGTAAAAG+TGG - chr6_3:64299574-64299593 Msa0956600:intron 35.0%
ATGTAAGTGGTGTAAAAGTG+GGG - chr6_3:64299576-64299595 Msa0956600:intron 35.0%
GAAAATAGGGTTGAAGCTTA+TGG + chr6_3:64299693-64299712 None:intergenic 35.0%
GAGACATAAAGAGGGAAAAT+AGG + chr6_3:64299707-64299726 None:intergenic 35.0%
AAAGGGAAGAGACATAAAGA+GGG + chr6_3:64299715-64299734 None:intergenic 35.0%
AAAAGGGAAGAGACATAAAG+AGG + chr6_3:64299716-64299735 None:intergenic 35.0%
!! GGCTTGATGACTTAAGTTTT+TGG - chr6_3:64299793-64299812 Msa0956600:intron 35.0%
!! GGTACTTGTTGATTTAGGTT+TGG - chr6_3:64299850-64299869 Msa0956600:intron 35.0%
AATGATTGCTCAAAGAGTAG+TGG + chr6_3:64300155-64300174 None:intergenic 35.0%
ATTGGTGAAATTGCAAGCTT+TGG - chr6_3:64300611-64300630 Msa0956600:intron 35.0%
GCCATTGAAATCGTAAATGT+TGG - chr6_3:64300825-64300844 Msa0956600:intron 35.0%
AATTCAACAACTTACGTCGA+TGG - chr6_3:64300893-64300912 Msa0956600:intron 35.0%
CTTATAAATTGCTTGACCCT+TGG - chr6_3:64301013-64301032 Msa0956600:intron 35.0%
TTGGAAAAGCTATGTAATGG+TGG - chr6_3:64301128-64301147 Msa0956600:intron 35.0%
AGATTCCAAATTGCAGCAAT+TGG + chr6_3:64301256-64301275 None:intergenic 35.0%
!! CTTTAGATAAGGCTTTAGGT+TGG - chr6_3:64301355-64301374 Msa0956600:intron 35.0%
! TGATGATGCCTACAATTTGA+CGG - chr6_3:64301589-64301608 Msa0956600:intron 35.0%
AATTTGGTCCGTCAAATTGT+AGG + chr6_3:64301600-64301619 None:intergenic 35.0%
AATCATGAATACCTTGAGGA+TGG + chr6_3:64301795-64301814 None:intergenic 35.0%
CATGAATCATGAATACCTTG+AGG + chr6_3:64301799-64301818 None:intergenic 35.0%
TAACCAATTTGAACCTAACC+GGG + chr6_3:64302043-64302062 None:intergenic 35.0%
CTAACCAATTTGAACCTAAC+CGG + chr6_3:64302044-64302063 None:intergenic 35.0%
GTTCAAATTGGTTAGACAGT+TGG - chr6_3:64302049-64302068 Msa0956600:intron 35.0%
AAATTGGTTAGACAGTTGGA+TGG - chr6_3:64302053-64302072 Msa0956600:intron 35.0%
! TCTTCTATGAAGCATCAGAA+AGG - chr6_3:64302306-64302325 Msa0956600:intron 35.0%
!! CATGAACTCTCACTTTTAGT+AGG + chr6_3:64302435-64302454 None:intergenic 35.0%
CTACTAAAAGTGAGAGTTCA+TGG - chr6_3:64302433-64302452 Msa0956600:intron 35.0%
ACTAAAAGTGAGAGTTCATG+GGG - chr6_3:64302435-64302454 Msa0956600:intron 35.0%
!! GGATTTTTCAATGCTTACTC+TGG - chr6_3:64302456-64302475 Msa0956600:intron 35.0%
CTCTGGTTATCCTAGTTATA+TGG - chr6_3:64302473-64302492 Msa0956600:intron 35.0%
TGGCAAATACTCAATCTTCT+AGG - chr6_3:64302493-64302512 Msa0956600:intron 35.0%
GGCAAATACTCAATCTTCTA+GGG - chr6_3:64302494-64302513 Msa0956600:intron 35.0%
AGAGATATGGTTCATCTACT+AGG - chr6_3:64302562-64302581 Msa0956600:intron 35.0%
TCATCTACTAGGTCTATTCA+AGG - chr6_3:64302573-64302592 Msa0956600:intron 35.0%
!! AGATTCTGATTTTAGGAGCA+AGG - chr6_3:64302626-64302645 Msa0956600:intron 35.0%
AATTCTGTTCAAGCTACTTG+TGG + chr6_3:64302661-64302680 None:intergenic 35.0%
ACAAGTAGCTTGAACAGAAT+TGG - chr6_3:64302660-64302679 Msa0956600:intron 35.0%
CAAGTAGCTTGAACAGAATT+GGG - chr6_3:64302661-64302680 Msa0956600:intron 35.0%
TTGGGAGTAGTACCAATTTA+AGG - chr6_3:64302679-64302698 Msa0956600:intron 35.0%
!!! TATGCTTTTAGTTCCTCTTC+AGG + chr6_3:64302843-64302862 None:intergenic 35.0%
!! ATGTGGTCTTTGATAGTGTA+GGG + chr6_3:64303085-64303104 None:intergenic 35.0%
AAAGTCAAAAGTCAACCATG+TGG + chr6_3:64303102-64303121 None:intergenic 35.0%
! ATGGTGAGGTTTGTGTCATT+GGG + chr6_3:64295788-64295807 None:intergenic 40.0%
! TGTTAGTCTAACAACCTCAG+CGG + chr6_3:64296059-64296078 None:intergenic 40.0%
AGACTAACAAGTAATACGGC+TGG - chr6_3:64296070-64296089 Msa0956600:three_prime_UTR 40.0%
CTCGATATCCGAAACAACTA+AGG + chr6_3:64296414-64296433 None:intergenic 40.0%
GTCAAACAAGTACAGTGATG+TGG + chr6_3:64296874-64296893 None:intergenic 40.0%
AGTGTGTCCCACTATTAAGT+GGG + chr6_3:64297237-64297256 None:intergenic 40.0%
TAGTGTGTCCCACTATTAAG+TGG + chr6_3:64297238-64297257 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr6_3:64297441-64297460 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr6_3:64297440-64297459 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr6_3:64297440-64297459 Msa0956600:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr6_3:64297441-64297460 Msa0956600:intron 40.0%
CTGTACTCCATAGTCTAAAC+TGG + chr6_3:64297471-64297490 None:intergenic 40.0%
CTGAAAATGTACATCCAGAG+TGG + chr6_3:64298355-64298374 None:intergenic 40.0%
!! CGGCTAAAATCGGTTTTCAT+CGG + chr6_3:64298421-64298440 None:intergenic 40.0%
GGAGTTGTCAAAATAGTTGG+GGG - chr6_3:64298468-64298487 Msa0956600:intron 40.0%
AGTGTGTGAGTGAGAATACA+AGG - chr6_3:64298625-64298644 Msa0956600:intron 40.0%
! AATGGGCCAAAGTGCTATAT+AGG - chr6_3:64298854-64298873 Msa0956600:intron 40.0%
TGCACTTACAACGGTAAATG+AGG + chr6_3:64299414-64299433 None:intergenic 40.0%
GAATCCAATCCCAATGTAAG+TGG - chr6_3:64299563-64299582 Msa0956600:intron 40.0%
TACACCACTTACATTGGGAT+TGG + chr6_3:64299570-64299589 None:intergenic 40.0%
AAGTGGGGATAATGCAACAT+AGG - chr6_3:64299591-64299610 Msa0956600:intron 40.0%
! GTAGTGGTTTAAAAGTGTGC+TGG + chr6_3:64300139-64300158 None:intergenic 40.0%
TTTCTAAACTTGTGCCCCAA+AGG + chr6_3:64300413-64300432 None:intergenic 40.0%
TATGAATTTGGAAGGCAAGG+AGG - chr6_3:64300568-64300587 Msa0956600:intron 40.0%
ATGAATTTGGAAGGCAAGGA+GGG - chr6_3:64300569-64300588 Msa0956600:intron 40.0%
! AAATTGCAAGCTTTGGTGAG+AGG - chr6_3:64300618-64300637 Msa0956600:intron 40.0%
GCTAAGACGAATGCAAACAT+TGG - chr6_3:64300671-64300690 Msa0956600:intron 40.0%
CCAAATTGCAGCAATTGGTA+GGG + chr6_3:64301251-64301270 None:intergenic 40.0%
TCCAAATTGCAGCAATTGGT+AGG + chr6_3:64301252-64301271 None:intergenic 40.0%
AGTGGGTGTTCATAATCATC+AGG + chr6_3:64301740-64301759 None:intergenic 40.0%
ACATGAACTTAGAAAGAGCC+CGG - chr6_3:64302022-64302041 Msa0956600:intron 40.0%
GTTGGATGGAAGAAAACACA+TGG - chr6_3:64302067-64302086 Msa0956600:intron 40.0%
TGCTTCATAGAAGAGAGACT+TGG + chr6_3:64302300-64302319 None:intergenic 40.0%
!! TACTCAATCTTCTAGGGCTA+AGG - chr6_3:64302500-64302519 Msa0956600:intron 40.0%
!! AATCTTCTAGGGCTAAGGTT+AGG - chr6_3:64302505-64302524 Msa0956600:intron 40.0%
! TCAAACTCTAGCCTTTGTCT+TGG + chr6_3:64302543-64302562 None:intergenic 40.0%
AGGCTAGAGTTTGAGAGATA+TGG - chr6_3:64302549-64302568 Msa0956600:intron 40.0%
TAGGTCTATTCAAGGCCTTT+GGG - chr6_3:64302581-64302600 Msa0956600:intron 40.0%
AATTAGACCCTGATTCCCAA+AGG + chr6_3:64302599-64302618 None:intergenic 40.0%
! ATGGACTGAAACATGAGTGT+AGG + chr6_3:64302790-64302809 None:intergenic 40.0%
!! CAATCCCAACACTCACTTTT+CGG + chr6_3:64302909-64302928 None:intergenic 40.0%
!! CATGTGGTCTTTGATAGTGT+AGG + chr6_3:64303086-64303105 None:intergenic 40.0%
CTACACTATCAAAGACCACA+TGG - chr6_3:64303084-64303103 Msa0956600:CDS 40.0%
! TGAGGTTTGTGTCATTGGGT+GGG + chr6_3:64295784-64295803 None:intergenic 45.0%
CATGGTGAGGTTTGTGTCAT+TGG + chr6_3:64295789-64295808 None:intergenic 45.0%
AACTTTCTCCGACGACTCTT+CGG - chr6_3:64295809-64295828 Msa0956600:three_prime_UTR 45.0%
!!! TCTTTTTTGTTGGTGGTGGG+TGG + chr6_3:64295866-64295885 None:intergenic 45.0%
CTAACAAGTAATACGGCTGG+TGG - chr6_3:64296073-64296092 Msa0956600:three_prime_UTR 45.0%
GAAAGCCGACTGAATCTTCA+CGG + chr6_3:64296167-64296186 None:intergenic 45.0%
GGGAGTTCCAGTTTAGACTA+TGG - chr6_3:64297461-64297480 Msa0956600:intron 45.0%
!! TTCTAAGGCAAAGTTGTCGG+TGG + chr6_3:64297511-64297530 None:intergenic 45.0%
GGTCATTGACCTTTGTCAGA+AGG - chr6_3:64298269-64298288 Msa0956600:CDS 45.0%
! TCTAAAATCCCAACCCACTC+TGG - chr6_3:64298338-64298357 Msa0956600:CDS 45.0%
! ATGTACATCCAGAGTGGGTT+GGG + chr6_3:64298349-64298368 None:intergenic 45.0%
AATGTACATCCAGAGTGGGT+TGG + chr6_3:64298350-64298369 None:intergenic 45.0%
TCTGGTGGAGAGAAATATGG+TGG + chr6_3:64298389-64298408 None:intergenic 45.0%
CACTCTGGTGGAGAGAAATA+TGG + chr6_3:64298392-64298411 None:intergenic 45.0%
CATATTTCTCTCCACCAGAG+TGG - chr6_3:64298390-64298409 Msa0956600:intron 45.0%
ATGGTATATCCGGACGGAAT+TGG - chr6_3:64298447-64298466 Msa0956600:intron 45.0%
TTGACAACTCCAATTCCGTC+CGG + chr6_3:64298459-64298478 None:intergenic 45.0%
ACAATGTTACTAGACCTGCG+TGG - chr6_3:64298538-64298557 Msa0956600:intron 45.0%
!! TTTCCATTCTGGGACCAGAA+AGG - chr6_3:64298753-64298772 Msa0956600:intron 45.0%
! ATACCTTTCTGGTCCCAGAA+TGG + chr6_3:64298759-64298778 None:intergenic 45.0%
GGACACACGAGCCTTTAATT+AGG - chr6_3:64299267-64299286 Msa0956600:intron 45.0%
GGGGATAATGCAACATAGGA+AGG - chr6_3:64299595-64299614 Msa0956600:intron 45.0%
!! CATTGGTTCGACTTCAGTCT+CGG - chr6_3:64300688-64300707 Msa0956600:intron 45.0%
!! ATTGGTTCGACTTCAGTCTC+GGG - chr6_3:64300689-64300708 Msa0956600:intron 45.0%
CCCTACCAATTGCTGCAATT+TGG - chr6_3:64301248-64301267 Msa0956600:intron 45.0%
TCGTACTATAGACGCGAAGT+GGG + chr6_3:64301757-64301776 None:intergenic 45.0%
TTCGTACTATAGACGCGAAG+TGG + chr6_3:64301758-64301777 None:intergenic 45.0%
CATTTGAGCTACATCTCTGC+AGG + chr6_3:64301990-64302009 None:intergenic 45.0%
AACTTAGAAAGAGCCCGGTT+AGG - chr6_3:64302027-64302046 Msa0956600:intron 45.0%
GAAAACACATGGAGCCAAAC+CGG - chr6_3:64302078-64302097 Msa0956600:intron 45.0%
!! GCTATAGAAGAGCGTTTCGA+CGG + chr6_3:64302270-64302289 None:intergenic 45.0%
! AAATGCCTGTGGACTACTCT+CGG + chr6_3:64302364-64302383 None:intergenic 45.0%
! GAGTAGTCCACAGGCATTTT+TGG - chr6_3:64302365-64302384 Msa0956600:intron 45.0%
GAAGAAGCCAAAAATGCCTG+TGG + chr6_3:64302375-64302394 None:intergenic 45.0%
GCTTCTTCAAGACTCGAAAG+TGG - chr6_3:64302387-64302406 Msa0956600:intron 45.0%
! CACAAAGTGCTCCAAGACAA+AGG - chr6_3:64302529-64302548 Msa0956600:intron 45.0%
CTAGGTCTATTCAAGGCCTT+TGG - chr6_3:64302580-64302599 Msa0956600:intron 45.0%
! ATTCAAGGCCTTTGGGAATC+AGG - chr6_3:64302588-64302607 Msa0956600:intron 45.0%
! TTCAAGGCCTTTGGGAATCA+GGG - chr6_3:64302589-64302608 Msa0956600:intron 45.0%
AGGAACCGAAAAGTGAGTGT+TGG - chr6_3:64302901-64302920 Msa0956600:CDS 45.0%
GGAACCGAAAAGTGAGTGTT+GGG - chr6_3:64302902-64302921 Msa0956600:CDS 45.0%
!!! AGAATTTTTTAATATTTTTT+TGG - chr6_3:64296954-64296973 Msa0956600:CDS 5.0%
!!! AATATATATAACATTATTTT+TGG - chr6_3:64299829-64299848 Msa0956600:intron 5.0%
!!! AAAACAAAATTAAATTTTAT+AGG - chr6_3:64302929-64302948 Msa0956600:CDS 5.0%
!!! AAACAAAATTAAATTTTATA+GGG - chr6_3:64302930-64302949 Msa0956600:CDS 5.0%
! TTGTGTCATTGGGTGGGAGA+GGG + chr6_3:64295778-64295797 None:intergenic 50.0%
! TTTGTGTCATTGGGTGGGAG+AGG + chr6_3:64295779-64295798 None:intergenic 50.0%
! GTGAGGTTTGTGTCATTGGG+TGG + chr6_3:64295785-64295804 None:intergenic 50.0%
GTCGGAGAAAGTTCATGGTG+AGG + chr6_3:64295802-64295821 None:intergenic 50.0%
GAGTCGTCGGAGAAAGTTCA+TGG + chr6_3:64295807-64295826 None:intergenic 50.0%
!! GTGGTTCTGGTGGTGGATTA+CGG + chr6_3:64295847-64295866 None:intergenic 50.0%
AGTAGCAGCAGCAACAGCAA+TGG + chr6_3:64295996-64296015 None:intergenic 50.0%
GAAATTCTGCTGGAGGACCT+CGG - chr6_3:64296095-64296114 Msa0956600:three_prime_UTR 50.0%
TGCTGCCGTGAAGATTCAGT+CGG - chr6_3:64296159-64296178 Msa0956600:three_prime_UTR 50.0%
! AAGATTCAGTCGGCTTTCCG+AGG - chr6_3:64296169-64296188 Msa0956600:three_prime_UTR 50.0%
! GTCGGCTTTCCGAGGTTATT+TGG - chr6_3:64296177-64296196 Msa0956600:three_prime_UTR 50.0%
TGGTGGGACCCACTTAATAG+TGG - chr6_3:64297226-64297245 Msa0956600:intron 50.0%
GGTGGGACCCACTTAATAGT+GGG - chr6_3:64297227-64297246 Msa0956600:intron 50.0%
GTCTAAACTGGAACTCCCTC+CGG + chr6_3:64297459-64297478 None:intergenic 50.0%
GGCAAAGTTGTCGGTGGAAA+TGG + chr6_3:64297505-64297524 None:intergenic 50.0%
GCACGTGATAGGAATACCGA+GGG + chr6_3:64297909-64297928 None:intergenic 50.0%
AGCACGTGATAGGAATACCG+AGG + chr6_3:64297910-64297929 None:intergenic 50.0%
TCGGTATTCCTATCACGTGC+TGG - chr6_3:64297909-64297928 Msa0956600:intron 50.0%
AATTGCAGCCAGCACGTGAT+AGG + chr6_3:64297920-64297939 None:intergenic 50.0%
TTTCATCGGATGCTCCACTC+TGG + chr6_3:64298407-64298426 None:intergenic 50.0%
TGTTACTAGACCTGCGTGGT+AGG - chr6_3:64298542-64298561 Msa0956600:intron 50.0%
GTTACTAGACCTGCGTGGTA+GGG - chr6_3:64298543-64298562 Msa0956600:intron 50.0%
! TGACGGATCTTCCATCCTCA+AGG - chr6_3:64301781-64301800 Msa0956600:intron 50.0%
GAGCCCGGTTAGGTTCAAAT+TGG - chr6_3:64302037-64302056 Msa0956600:intron 50.0%
!!! ATTTTTCGATGAAGCGCCGC+CGG + chr6_3:64302100-64302119 None:intergenic 50.0%
CAAGACTCGAAAGTGGTTCG+AGG - chr6_3:64302394-64302413 Msa0956600:intron 50.0%
CTGTTCAAGCTACTTGTGGC+TGG + chr6_3:64302657-64302676 None:intergenic 50.0%
TGGGAGAGGGTAATGAGGGA+AGG + chr6_3:64295765-64295784 None:intergenic 55.0%
TGGGTGGGAGAGGGTAATGA+GGG + chr6_3:64295769-64295788 None:intergenic 55.0%
TTGGGTGGGAGAGGGTAATG+AGG + chr6_3:64295770-64295789 None:intergenic 55.0%
TTTCTCCGACGACTCTTCGG+CGG - chr6_3:64295812-64295831 Msa0956600:three_prime_UTR 55.0%
! TTTTGCCGCCGAAGAGTCGT+CGG + chr6_3:64295820-64295839 None:intergenic 55.0%
!! TTGTTGGTGGTGGGTGGTTC+TGG + chr6_3:64295860-64295879 None:intergenic 55.0%
AGCGAGTGCAGCTTCAGCAA+CGG + chr6_3:64296023-64296042 None:intergenic 55.0%
ACGGCTGGTGGAAATTCTGC+TGG - chr6_3:64296085-64296104 Msa0956600:three_prime_UTR 55.0%
GCTGGTGGAAATTCTGCTGG+AGG - chr6_3:64296088-64296107 Msa0956600:three_prime_UTR 55.0%
GCTATGGTAGTCAGTGCCCT+CGG - chr6_3:64297890-64297909 Msa0956600:intron 55.0%
CTCACATTACCCTACCACGC+AGG + chr6_3:64298555-64298574 None:intergenic 55.0%
AACACATGGAGCCAAACCGG+CGG - chr6_3:64302081-64302100 Msa0956600:intron 55.0%
!! TTGGTGGTGGGTGGTTCTGG+TGG + chr6_3:64295857-64295876 None:intergenic 60.0%
GAGTGCAGCTTCAGCAACGG+CGG + chr6_3:64296020-64296039 None:intergenic 60.0%
AACCGTCTCCGACCAGTCGT+CGG + chr6_3:64296124-64296143 None:intergenic 60.0%
! GACTGGTCGGAGACGGTTGT+CGG - chr6_3:64296126-64296145 Msa0956600:three_prime_UTR 60.0%
CATCGGATGCTCCACTCTGG+TGG + chr6_3:64298404-64298423 None:intergenic 60.0%
TGGACTACTCTCGGCGGTTC+GGG + chr6_3:64302355-64302374 None:intergenic 60.0%
! GTGGACTACTCTCGGCGGTT+CGG + chr6_3:64302356-64302375 None:intergenic 60.0%
AACCGCCGAGAGTAGTCCAC+AGG - chr6_3:64302356-64302375 Msa0956600:intron 60.0%
! TGCCTGTGGACTACTCTCGG+CGG + chr6_3:64302361-64302380 None:intergenic 60.0%
CTCGAAAGTGGTTCGAGGCG+AGG - chr6_3:64302399-64302418 Msa0956600:intron 60.0%
!! GTGGTGGGTGGTTCTGGTGG+TGG + chr6_3:64295854-64295873 None:intergenic 65.0%
TGCTGCTCATGCTGCCGCTG+AGG - chr6_3:64296042-64296061 Msa0956600:three_prime_UTR 65.0%
CTCGGACTCCGACGACTGGT+CGG - chr6_3:64296113-64296132 Msa0956600:three_prime_UTR 65.0%
! CTCCGACGACTGGTCGGAGA+CGG - chr6_3:64296119-64296138 Msa0956600:three_prime_UTR 65.0%
!! TCGATGAAGCGCCGCCGGTT+TGG + chr6_3:64302095-64302114 None:intergenic 65.0%
GGACCTCGGACTCCGACGAC+TGG - chr6_3:64296109-64296128 Msa0956600:three_prime_UTR 70.0%
CGACCAGTCGTCGGAGTCCG+AGG + chr6_3:64296115-64296134 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 64295728 64303239 64295728 ID=Msa0956600;Name=Msa0956600
chr6_3 mRNA 64295728 64303239 64295728 ID=Msa0956600-mRNA-1;Parent=Msa0956600;Name=Msa0956600-mRNA-1;_AED=0.32;_eAED=0.32;_QI=78|1|1|1|1|1|4|535|456
chr6_3 exon 64295728 64296973 64295728 ID=Msa0956600-mRNA-1:exon:12265;Parent=Msa0956600-mRNA-1
chr6_3 exon 64297165 64297233 64297165 ID=Msa0956600-mRNA-1:exon:12264;Parent=Msa0956600-mRNA-1
chr6_3 exon 64298188 64298385 64298188 ID=Msa0956600-mRNA-1:exon:12263;Parent=Msa0956600-mRNA-1
chr6_3 exon 64302769 64303239 64302769 ID=Msa0956600-mRNA-1:exon:12262;Parent=Msa0956600-mRNA-1
chr6_3 five_prime_UTR 64303162 64303239 64303162 ID=Msa0956600-mRNA-1:five_prime_utr;Parent=Msa0956600-mRNA-1
chr6_3 CDS 64302769 64303161 64302769 ID=Msa0956600-mRNA-1:cds;Parent=Msa0956600-mRNA-1
chr6_3 CDS 64298188 64298385 64298188 ID=Msa0956600-mRNA-1:cds;Parent=Msa0956600-mRNA-1
chr6_3 CDS 64297165 64297233 64297165 ID=Msa0956600-mRNA-1:cds;Parent=Msa0956600-mRNA-1
chr6_3 CDS 64296263 64296973 64296263 ID=Msa0956600-mRNA-1:cds;Parent=Msa0956600-mRNA-1
chr6_3 three_prime_UTR 64295728 64296262 64295728 ID=Msa0956600-mRNA-1:three_prime_utr;Parent=Msa0956600-mRNA-1
Gene Sequence

>Msa0956600

ATGAACTTTCTCCGACGACTCTTCGGCGGCAAAAAACACCGTAATCCACCACCAGAACCACCCACCACCAACAAAAAAGACAAAAGAACATGGAGTTTCACAAAGAACAACACAAGACAAAAAACCAACAAAAATTCTGACCCTTCAACTTCTTCTTTCTCTGATAACTATGATGCTAATAAACATGCCATTGCTGTTGCTGCTGCTACTGCCGCCGTTGCTGAAGCTGCACTCGCTGCTGCTCATGCTGCCGCTGAGGTTGTTAGACTAACAAGTAATACGGCTGGTGGAAATTCTGCTGGAGGACCTCGGACTCCGACGACTGGTCGGAGACGGTTGTCGGAAGAAATTGATGCTGCCGTGAAGATTCAGTCGGCTTTCCGAGGTTATTTGGCAAGGAGGGCATTAAGAGCACTTAAAGCATTGGTGAAATTGCAAGCTTTGGTGAGAGGTCACATTGTAAGAAAACAAACAGCTGATATGCTAAGACGAATGCAAACATTGGTTCGACTTCAGTCTCGGGCACGTGCAAGTCGTGTGCACATTTCGGATAATATGCACTCTTTCAAGTCTTCGCTTTCTCGTTACCCTGTTCCTGATGATTATGAACACCCACTTCGCGTCTATAGTACGAAATTTGACGGATCTTCCATCCTCAAGAGATGTAGCTCAAATGCAAATTTTAGAGACATGAACTTAGAAAGAGCCCGGTTAGGTTCAAATTGGTTAGACAGTTGGATGGAAGAAAACACATGGAGCCAAACCGGCGGCGCTTCATCGAAAAATGTAAATGATGATGAGAAGAGTGACAAAATTCTTGAAGTAGATACTTGGAAACCACATTTGAAATCACAACATAGTACTAGCACCTCTTTTCAACATCATTATTCATCTTCTGATTACAATAATGAAAATTTTATGGTACATGAGTCGCCGTCGAAACGCTCTTCTATAGCTTATAATCCAAGTCTCTCTTCTATGAAGCATCAGAAAGGAAAAGAAGAAGAAGTAGCTTCTTCCCGAACCGCCGAGAGTAGTCCACAGGCATTTTTGGCTTCTTCAAGACTCGAAAGTGGTTCGAGGCGAGGTCCTTTTACACCTACTAAAAGTGAGAGTTCATGGGGATTTTTCAATGCTTACTCTGGTTATCCTAGTTATATGGCAAATACTCAATCTTCTAGGGCTAAGGTTAGGTCACAAAGTGCTCCAAGACAAAGGCTAGAGTTTGAGAGATATGGTTCATCTACTAGGTCTATTCAAGGCCTTTGGGAATCAGGGTCTAATTCAGAAATAGATTCTGATTTTAGGAGCAAGGTTTATCCAGCCACAAGTAGCTTGAACAGAATTGGGAGTAGTACCAATTTAAGGTGA
Protein sequence

>Msa0956600

MNFLRRLFGGKKHRNPPPEPPTTNKKDKRTWSFTKNNTRQKTNKNSDPSTSSFSDNYDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSNTAGGNSAGGPRTPTTGRRRLSEEIDAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQSRARASRVHISDNMHSFKSSLSRYPVPDDYEHPLRVYSTKFDGSSILKRCSSNANFRDMNLERARLGSNWLDSWMEENTWSQTGGASSKNVNDDEKSDKILEVDTWKPHLKSQHSTSTSFQHHYSSSDYNNENFMVHESPSKRSSIAYNPSLSSMKHQKGKEEEVASSRTAESSPQAFLASSRLESGSRRGPFTPTKSESSWGFFNAYSGYPSYMANTQSSRAKVRSQSAPRQRLEFERYGSSTRSIQGLWESGSNSEIDSDFRSKVYPATSSLNRIGSSTNLR*