Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0130500 | G7I4W9 | 98.715 | 467 | 6 | 0 | 1 | 467 | 1 | 467 | 0.0 | 952 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036350 | Msa0130500 | 0.828670 | 7.903182e-55 | -8.615850e-47 |
| Msa0095940 | Msa0130500 | 0.803167 | 3.966015e-49 | -8.615850e-47 |
| Msa0130500 | Msa0135030 | 0.810098 | 1.364862e-50 | -8.615850e-47 |
| Msa0130500 | Msa0176370 | 0.861352 | 1.089549e-63 | -8.615850e-47 |
| Msa0130500 | Msa0268210 | -0.815826 | 7.577265e-52 | -8.615850e-47 |
| Msa0130500 | Msa0268350 | -0.812368 | 4.391130e-51 | -8.615850e-47 |
| Msa0130500 | Msa0268450 | -0.825138 | 5.519749e-54 | -8.615850e-47 |
| Msa0130500 | Msa0268670 | -0.829590 | 4.727882e-55 | -8.615850e-47 |
| Msa0130500 | Msa0268880 | -0.804773 | 1.839083e-49 | -8.615850e-47 |
| Msa0130500 | Msa0293720 | 0.859595 | 3.710107e-63 | -8.615850e-47 |
| Msa0130500 | Msa0320170 | 0.821327 | 4.283455e-53 | -8.615850e-47 |
| Msa0130500 | Msa0576560 | 0.800534 | 1.377888e-48 | -8.615850e-47 |
| Msa0130500 | Msa0582560 | -0.820030 | 8.505506e-53 | -8.615850e-47 |
| Msa0130500 | Msa0582590 | -0.804193 | 2.429062e-49 | -8.615850e-47 |
| Msa0130500 | Msa0582860 | -0.808448 | 3.081204e-50 | -8.615850e-47 |
| Msa0130500 | Msa0590620 | -0.803097 | 4.100578e-49 | -8.615850e-47 |
| Msa0130500 | Msa0744640 | 0.804079 | 2.566047e-49 | -8.615850e-47 |
| Msa0130500 | Msa0833270 | 0.813416 | 2.587936e-51 | -8.615850e-47 |
| Msa0130500 | Msa0841730 | 0.803583 | 3.252308e-49 | -8.615850e-47 |
| Msa0130500 | Msa0901270 | 0.810686 | 1.018911e-50 | -8.615850e-47 |
| Msa0130500 | Msa0919120 | -0.833603 | 4.849660e-56 | -8.615850e-47 |
| Msa0130500 | Msa0940910 | 0.809687 | 1.673045e-50 | -8.615850e-47 |
| Msa0130500 | Msa1020210 | 0.804983 | 1.661956e-49 | -8.615850e-47 |
| Msa0130500 | Msa1027340 | 0.805368 | 1.380455e-49 | -8.615850e-47 |
| Msa0130500 | Msa1027400 | 0.806608 | 7.575182e-50 | -8.615850e-47 |
| Msa0130500 | Msa1086030 | -0.810868 | 9.306214e-51 | -8.615850e-47 |
| Msa0130500 | Msa1086320 | -0.805524 | 1.280664e-49 | -8.615850e-47 |
| Msa0130500 | Msa1086350 | -0.805198 | 1.498630e-49 | -8.615850e-47 |
| Msa0130500 | Msa1086420 | -0.806068 | 9.841056e-50 | -8.615850e-47 |
| Msa0130500 | Msa1086490 | -0.808475 | 3.041819e-50 | -8.615850e-47 |
| Msa0130500 | Msa1086510 | -0.805684 | 1.185193e-49 | -8.615850e-47 |
| Msa0130500 | Msa1086670 | -0.805343 | 1.397673e-49 | -8.615850e-47 |
| Msa0130500 | Msa1086840 | -0.840823 | 6.894050e-58 | -8.615850e-47 |
| Msa0130500 | Msa1154570 | 0.803415 | 3.525188e-49 | -8.615850e-47 |
| Msa0130500 | Msa1219530 | -0.800959 | 1.128419e-48 | -8.615850e-47 |
| Msa0130500 | Msa1241740 | 0.813729 | 2.208794e-51 | -8.615850e-47 |
| Msa0130500 | Msa1333220 | -0.819046 | 1.426516e-52 | -8.615850e-47 |
| Msa0130500 | Msa1354860 | -0.802356 | 5.832310e-49 | -8.615850e-47 |
| Msa0130500 | Msa1355030 | -0.810751 | 9.865549e-51 | -8.615850e-47 |
| Msa0130500 | Msa1404050 | 0.808987 | 2.364273e-50 | -8.615850e-47 |
| Msa0130500 | Msa1409360 | -0.800128 | 1.666887e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0130500 | MtrunA17_Chr1g0198781 | 98.715 | 467 | 6 | 0 | 1 | 467 | 1 | 467 | 0.0 | 952 |
| Msa0130500 | MtrunA17_Chr4g0062731 | 66.667 | 468 | 145 | 4 | 8 | 467 | 1 | 465 | 0.0 | 637 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0130500 | AT1G68820.1 | 72.863 | 468 | 126 | 1 | 1 | 467 | 1 | 468 | 0.0 | 715 |
| Msa0130500 | AT1G68820.4 | 71.941 | 474 | 126 | 2 | 1 | 467 | 1 | 474 | 0.0 | 710 |
| Msa0130500 | AT1G68820.3 | 73.397 | 421 | 111 | 1 | 48 | 467 | 11 | 431 | 0.0 | 653 |
| Msa0130500 | AT1G73950.1 | 67.457 | 464 | 141 | 4 | 12 | 467 | 5 | 466 | 0.0 | 652 |
| Msa0130500 | AT1G68820.2 | 72.365 | 427 | 111 | 2 | 48 | 467 | 11 | 437 | 0.0 | 648 |
| Msa0130500 | AT1G18470.1 | 66.453 | 468 | 148 | 3 | 8 | 467 | 1 | 467 | 0.0 | 648 |
| Msa0130500 | AT1G73950.2 | 64.103 | 468 | 130 | 4 | 8 | 467 | 1 | 438 | 0.0 | 610 |
| Msa0130500 | AT1G18470.2 | 65.385 | 390 | 126 | 3 | 8 | 389 | 1 | 389 | 0.0 | 518 |
Find 117 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAGCAATGCACAGTTTA+AGG | 0.145323 | 1_3:+60798634 | None:intergenic |
| TGGGACTTGTTTATTAACTA+TGG | 0.220890 | 1_3:-60800647 | Msa0130500:CDS |
| GCGCAAAAGATATACCAATT+TGG | 0.258604 | 1_3:-60800167 | Msa0130500:CDS |
| TGCAGGTGATGTTGCTGCCC+TGG | 0.304003 | 1_3:-60800675 | Msa0130500:intron |
| TAGTGTAATTAATGTTTAAC+TGG | 0.307688 | 1_3:-60798287 | Msa0130500:three_prime_UTR |
| GATATAGATGAGTAGCTTCT+AGG | 0.308903 | 1_3:+60800042 | None:intergenic |
| GCAAAGAACGTGATGCTTGC+AGG | 0.316868 | 1_3:+60799014 | None:intergenic |
| CAAAATCCCGTGATTGCTTT+GGG | 0.323198 | 1_3:-60800017 | Msa0130500:CDS |
| CGCAAAAGATATACCAATTT+GGG | 0.323558 | 1_3:-60800166 | Msa0130500:CDS |
| GCAAGCATCACGTTCTTTGC+AGG | 0.327082 | 1_3:-60799011 | Msa0130500:intron |
| GCTTACCACATATCTTTAGA+AGG | 0.334804 | 1_3:+60801354 | None:intergenic |
| CTTCTTCTGTTGCAAGGAGC+TGG | 0.335527 | 1_3:-60800129 | Msa0130500:CDS |
| TCAAAATCCCGTGATTGCTT+TGG | 0.340689 | 1_3:-60800018 | Msa0130500:CDS |
| TGACCGTTTCCATGAATTGT+AGG | 0.347931 | 1_3:+60800487 | None:intergenic |
| ACTCCATTCTAGATATCTTA+TGG | 0.350126 | 1_3:+60800435 | None:intergenic |
| CTTCTTCTATGTATACATCT+TGG | 0.363964 | 1_3:-60803252 | Msa0130500:CDS |
| AGGAAACTTTGTTGAATGTT+TGG | 0.367014 | 1_3:-60798426 | Msa0130500:three_prime_UTR |
| GTGATGTTGCTGCCCTGGGC+TGG | 0.375144 | 1_3:-60800670 | Msa0130500:CDS |
| AAGTTTCCTTTGACTATCAT+AGG | 0.376479 | 1_3:+60798440 | None:intergenic |
| TCGATTGTCCCACGGCAGAT+AGG | 0.378930 | 1_3:+60798844 | None:intergenic |
| AGTCATAGCTACACCATTAC+TGG | 0.380264 | 1_3:-60803286 | Msa0130500:CDS |
| CTCTTGGCAGGTTGCTAGGT+TGG | 0.384100 | 1_3:-60799849 | Msa0130500:intron |
| CCTCCTCTTGGCAGGTTGCT+AGG | 0.384372 | 1_3:-60799853 | Msa0130500:intron |
| CCTGCTCCTTCGATGCCTCA+TGG | 0.387713 | 1_3:-60803433 | Msa0130500:CDS |
| TGGCACAATCCTACAATTCA+TGG | 0.391098 | 1_3:-60800496 | Msa0130500:CDS |
| ATATGACAGATGAAGCAGTA+TGG | 0.394755 | 1_3:-60802235 | Msa0130500:CDS |
| TGCAGCAATGCACAGTTTAA+GGG | 0.396105 | 1_3:+60798635 | None:intergenic |
| TTCTTCTATGTATACATCTT+GGG | 0.402849 | 1_3:-60803251 | Msa0130500:CDS |
| GCAGGTGATGTTGCTGCCCT+GGG | 0.413418 | 1_3:-60800674 | Msa0130500:intron |
| ATGTTGCTGCCCTGGGCTGG+TGG | 0.415523 | 1_3:-60800667 | Msa0130500:CDS |
| CAGCTCCTTGCAACAGAAGA+AGG | 0.417091 | 1_3:+60800130 | None:intergenic |
| CTGAAGAGAGAGAGAAAGGT+TGG | 0.418400 | 1_3:+60805141 | None:intergenic |
| AAATTTCAGGGAACACCATC+GGG | 0.437322 | 1_3:-60800189 | Msa0130500:intron |
| TCTCCCCTTCTTCTGTTGCA+AGG | 0.441729 | 1_3:-60800135 | Msa0130500:CDS |
| AATGCTACCATGCGCAGTTA+AGG | 0.443239 | 1_3:-60798525 | Msa0130500:three_prime_UTR |
| CGATTGTCCCACGGCAGATA+GGG | 0.448802 | 1_3:+60798845 | None:intergenic |
| TCAGTCTACACATCATATAT+AGG | 0.450844 | 1_3:+60798811 | None:intergenic |
| CTGCTCCTTCGATGCCTCAT+GGG | 0.451611 | 1_3:-60803432 | Msa0130500:CDS |
| ATGTGTAGGGCTTTGATGCC+TGG | 0.452224 | 1_3:-60802269 | Msa0130500:CDS |
| CCATGAGGCATCGAAGGAGC+AGG | 0.459822 | 1_3:+60803433 | None:intergenic |
| ATACATCTTGGGAGCAGTTA+TGG | 0.460031 | 1_3:-60803240 | Msa0130500:intron |
| GGGACTTGTTTATTAACTAT+GGG | 0.474665 | 1_3:-60800646 | Msa0130500:intron |
| TAAACAAGTCCCACCAGCCC+AGG | 0.475470 | 1_3:+60800657 | None:intergenic |
| GAAGAGTAATGAGTTGGAGA+AGG | 0.480625 | 1_3:-60805077 | Msa0130500:CDS |
| ATACCATAAGATATCTAGAA+TGG | 0.482455 | 1_3:-60800438 | Msa0130500:CDS |
| TGTTGCTGCCCTGGGCTGGT+GGG | 0.485436 | 1_3:-60800666 | Msa0130500:CDS |
| TGGAGACTTCAAGCTGCACT+TGG | 0.490047 | 1_3:-60799403 | Msa0130500:CDS |
| AGCTCAAATGCCACCAGTAA+TGG | 0.490887 | 1_3:+60803273 | None:intergenic |
| TTGGCAGGTTGCTAGGTTGG+TGG | 0.493004 | 1_3:-60799846 | Msa0130500:intron |
| TGTATCTTTATAGGATGTGT+AGG | 0.493067 | 1_3:-60802283 | Msa0130500:intron |
| AGTGTGCGTGACTTTGGAAC+AGG | 0.494919 | 1_3:+60805227 | None:intergenic |
| TGCAGTCTGCAGGATATTGG+CGG | 0.496698 | 1_3:-60800361 | Msa0130500:CDS |
| AAACTTACCACCATGAGAAA+AGG | 0.497898 | 1_3:+60804968 | None:intergenic |
| GAACGTGATGCTTGCAGGGA+AGG | 0.500638 | 1_3:+60799019 | None:intergenic |
| AATGCACAGTTTAAGGGAGG+TGG | 0.501325 | 1_3:+60798641 | None:intergenic |
| ATGTTGTGATAGCACGAGGC+AGG | 0.506024 | 1_3:-60803465 | Msa0130500:CDS |
| AAGAGTAATGAGTTGGAGAA+GGG | 0.507658 | 1_3:-60805076 | Msa0130500:CDS |
| GAGACTGAAGAGAGAGAGAA+AGG | 0.510253 | 1_3:+60805137 | None:intergenic |
| TAAATTTCAGGGAACACCAT+CGG | 0.510830 | 1_3:-60800190 | Msa0130500:intron |
| AGTATTTGGAAAGCAATGAA+TGG | 0.512298 | 1_3:+60800322 | None:intergenic |
| CTTTGTTGAATGTTTGGTTG+AGG | 0.512800 | 1_3:-60798420 | Msa0130500:three_prime_UTR |
| TGTTGAAGTCTATATGAACT+AGG | 0.513809 | 1_3:-60798548 | Msa0130500:three_prime_UTR |
| CGTTTCTCGTTTGTACGAAG+TGG | 0.520515 | 1_3:-60800516 | Msa0130500:CDS |
| CTTCTGGATTTCAATATCCA+TGG | 0.527664 | 1_3:-60801405 | Msa0130500:CDS |
| ATGCACAGTTTAAGGGAGGT+GGG | 0.529734 | 1_3:+60798642 | None:intergenic |
| CAGTGAAGAAAATGCCTAGA+GGG | 0.530565 | 1_3:-60799602 | Msa0130500:CDS |
| ACCATGAGAAAAGGAAGAAA+CGG | 0.533548 | 1_3:+60804977 | None:intergenic |
| TATGACAGATGAAGCAGTAT+GGG | 0.534167 | 1_3:-60802234 | Msa0130500:CDS |
| AACGGTCAAGCTTGAGAACA+AGG | 0.536993 | 1_3:+60804995 | None:intergenic |
| GGCTTTGATGCCTGGAGATG+AGG | 0.541183 | 1_3:-60802261 | Msa0130500:CDS |
| TATCTAGAATGGAGTAGAGA+AGG | 0.544891 | 1_3:-60800427 | Msa0130500:CDS |
| TTCGAAGAAGAGTAATGAGT+TGG | 0.546671 | 1_3:-60805083 | Msa0130500:CDS |
| CAAAGAACGTGATGCTTGCA+GGG | 0.547285 | 1_3:+60799015 | None:intergenic |
| AGCTCCTTGCAACAGAAGAA+GGG | 0.551454 | 1_3:+60800131 | None:intergenic |
| GCCTAGAGGGGAACTTGTTG+AGG | 0.557281 | 1_3:-60799589 | Msa0130500:CDS |
| TGGCGCCCATGAGGCATCGA+AGG | 0.558574 | 1_3:+60803427 | None:intergenic |
| TAAATACCTATGATAGTCAA+AGG | 0.560157 | 1_3:-60798446 | Msa0130500:three_prime_UTR |
| TGCACAGTTTAAGGGAGGTG+GGG | 0.563118 | 1_3:+60798643 | None:intergenic |
| GTATCTTTATAGGATGTGTA+GGG | 0.565095 | 1_3:-60802282 | Msa0130500:intron |
| CTTACCACATATCTTTAGAA+GGG | 0.565443 | 1_3:+60801355 | None:intergenic |
| TCCTCAACAAGTTCCCCTCT+AGG | 0.570816 | 1_3:+60799588 | None:intergenic |
| AGGCATCGAAGGAGCAGGCA+AGG | 0.572051 | 1_3:+60803438 | None:intergenic |
| TATTATCTCACAATGGCTTG+TGG | 0.576710 | 1_3:-60798767 | Msa0130500:three_prime_UTR |
| CGTGATGCTTGCAGGGAAGG+AGG | 0.577724 | 1_3:+60799022 | None:intergenic |
| TATGAATCCTTAACTGCGCA+TGG | 0.578759 | 1_3:+60798518 | None:intergenic |
| AATCCTACAATTCATGGAAA+CGG | 0.579082 | 1_3:-60800490 | Msa0130500:CDS |
| TCACTTAATGCTGTTTGATG+TGG | 0.581126 | 1_3:-60798361 | Msa0130500:three_prime_UTR |
| AGAAGTTACAAAATACAGCC+AGG | 0.582877 | 1_3:-60799371 | Msa0130500:CDS |
| TCCGTTCTTCGATTGTCCCA+CGG | 0.584122 | 1_3:+60798836 | None:intergenic |
| TTCAGTCTCTGCGATTTCTG+CGG | 0.586409 | 1_3:-60805123 | Msa0130500:five_prime_UTR |
| TTCACCCTTCTAAAGATATG+TGG | 0.589957 | 1_3:-60801359 | Msa0130500:intron |
| CTTCTTCTTCGCAACCTCCG+AGG | 0.591015 | 1_3:-60805194 | Msa0130500:five_prime_UTR |
| GCCGTGGGACAATCGAAGAA+CGG | 0.593080 | 1_3:-60798837 | Msa0130500:CDS |
| AAGAAGTGCCCTATCTGCCG+TGG | 0.599671 | 1_3:-60798853 | Msa0130500:CDS |
| AATAGACGAAGGAAGTAGAG+AGG | 0.600543 | 1_3:-60799821 | Msa0130500:CDS |
| ATGGTATTTGACGACGAACA+TGG | 0.601503 | 1_3:+60800454 | None:intergenic |
| TGTCTTACTTGGCGCCCATG+AGG | 0.603836 | 1_3:+60803418 | None:intergenic |
| CTTTGAAGAGCAGATTAATG+TGG | 0.604053 | 1_3:-60799046 | Msa0130500:CDS |
| GAGAACAAGGAGAAGAGAGA+AGG | 0.607762 | 1_3:+60805008 | None:intergenic |
| AAACAAGTCCCACCAGCCCA+GGG | 0.610460 | 1_3:+60800658 | None:intergenic |
| TAGAGGGGAACTTGTTGAGG+AGG | 0.612556 | 1_3:-60799586 | Msa0130500:intron |
| GCTCCTTGCAACAGAAGAAG+GGG | 0.614147 | 1_3:+60800132 | None:intergenic |
| ATCAATTCAAAAGCGATGAG+AGG | 0.615437 | 1_3:+60803073 | None:intergenic |
| AGAAGTGCCCTATCTGCCGT+GGG | 0.634893 | 1_3:-60798852 | Msa0130500:CDS |
| GCAGATACATTAATCACACT+TGG | 0.637461 | 1_3:+60798726 | None:intergenic |
| GATTCATATCGCTGTCGCTG+AGG | 0.653920 | 1_3:-60798503 | Msa0130500:three_prime_UTR |
| AGCAATGCACAGTTTAAGGG+AGG | 0.659991 | 1_3:+60798638 | None:intergenic |
| AGTGAAGAAAATGCCTAGAG+GGG | 0.666791 | 1_3:-60799601 | Msa0130500:CDS |
| TTTCATGTTGTGATAGCACG+AGG | 0.668280 | 1_3:-60803469 | Msa0130500:CDS |
| GGCAGCAACAAAGAAGACCA+TGG | 0.675195 | 1_3:+60801388 | None:intergenic |
| CATAGCTACACCATTACTGG+TGG | 0.678507 | 1_3:-60803283 | Msa0130500:CDS |
| GGTTGGTGGTCAATAGACGA+AGG | 0.703854 | 1_3:-60799832 | Msa0130500:CDS |
| ACAGTGAAGAAAATGCCTAG+AGG | 0.720684 | 1_3:-60799603 | Msa0130500:CDS |
| CTTTAGAAGGGTGAACACTG+TGG | 0.725837 | 1_3:+60801367 | None:intergenic |
| AGTTACAAAATACAGCCAGG+AGG | 0.745954 | 1_3:-60799368 | Msa0130500:CDS |
| ATATACGTATTATCTCACAA+TGG | 0.752173 | 1_3:-60798774 | Msa0130500:three_prime_UTR |
| GTAGCTATGACTGAATGACA+AGG | 0.785500 | 1_3:+60803297 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGAATATGATAATTCAAA+AGG | + | chr1_3:60798648-60798667 | None:intergenic | 15.0% |
| !!! | TTGTTAGATTAATTTTTGTT+TGG | - | chr1_3:60798864-60798883 | Msa0130500:CDS | 15.0% |
| !!! | ATTAATTTTTGTTTGGAATA+GGG | - | chr1_3:60798871-60798890 | Msa0130500:CDS | 15.0% |
| !!! | CTAATATGTTTTTTTATAAC+CGG | - | chr1_3:60799589-60799608 | Msa0130500:CDS | 15.0% |
| !! | ATAAAATAAAAAGAAACTGT+TGG | - | chr1_3:60799717-60799736 | Msa0130500:intron | 15.0% |
| !! | TAAAATAAAAAGAAACTGTT+GGG | - | chr1_3:60799718-60799737 | Msa0130500:intron | 15.0% |
| !!! | TTTAGTACTATTTTGATTTT+TGG | - | chr1_3:60801921-60801940 | Msa0130500:intron | 15.0% |
| !! | GTTATGATTGAAATTTAATT+AGG | + | chr1_3:60802666-60802685 | None:intergenic | 15.0% |
| !! | AGAAAAACAAATTTATCTTT+AGG | - | chr1_3:60803576-60803595 | Msa0130500:intron | 15.0% |
| !!! | GATTAATTTTTGTTTGGAAT+AGG | - | chr1_3:60798870-60798889 | Msa0130500:CDS | 20.0% |
| !! | TGTAATAAGATCTATAGATA+CGG | - | chr1_3:60799046-60799065 | Msa0130500:CDS | 20.0% |
| !!! | TGATATAATGAACTTTGAAA+GGG | + | chr1_3:60799990-60800009 | None:intergenic | 20.0% |
| !! | ATGATATAATGAACTTTGAA+AGG | + | chr1_3:60799991-60800010 | None:intergenic | 20.0% |
| !!! | TATCATAGAATTTGAGATTA+GGG | + | chr1_3:60800913-60800932 | None:intergenic | 20.0% |
| !!! | TTATCATAGAATTTGAGATT+AGG | + | chr1_3:60800914-60800933 | None:intergenic | 20.0% |
| !! | TTCTATGATAAACTTTCAAT+AGG | - | chr1_3:60800923-60800942 | Msa0130500:intron | 20.0% |
| !! | GACAAAAAATGTATCTTTAT+AGG | - | chr1_3:60801235-60801254 | Msa0130500:intron | 20.0% |
| !!! | TTTATAATACTCTGTTTTGA+TGG | - | chr1_3:60801451-60801470 | Msa0130500:intron | 20.0% |
| !!! | ATTTTTTTTCAAAACCAAAC+AGG | + | chr1_3:60801638-60801657 | None:intergenic | 20.0% |
| !!! | ATGTGTTCTTATTTTAACTT+TGG | - | chr1_3:60801706-60801725 | Msa0130500:intron | 20.0% |
| !! | AATCAAAATAGTACTAAAGA+AGG | + | chr1_3:60801919-60801938 | None:intergenic | 20.0% |
| !! | AATTATTAAGATGTCACAAA+TGG | + | chr1_3:60801969-60801988 | None:intergenic | 20.0% |
| !! | ATTTGTGACATCTTAATAAT+TGG | - | chr1_3:60801968-60801987 | Msa0130500:intron | 20.0% |
| !! | AAATACTTGAAAATTTGTCT+TGG | + | chr1_3:60802018-60802037 | None:intergenic | 20.0% |
| !! | AATAAATACGAAGTTTATCA+AGG | + | chr1_3:60802411-60802430 | None:intergenic | 20.0% |
| !!! | TATGAAACTTAGATTTTGAT+TGG | - | chr1_3:60802443-60802462 | Msa0130500:intron | 20.0% |
| !!! | ATGAAACTTAGATTTTGATT+GGG | - | chr1_3:60802444-60802463 | Msa0130500:intron | 20.0% |
| !! | TAATAATGATTGCAAAAGAT+GGG | - | chr1_3:60802477-60802496 | Msa0130500:intron | 20.0% |
| !! | AATGAATCATATCAAAGTAA+CGG | + | chr1_3:60802739-60802758 | None:intergenic | 20.0% |
| !! | AATGCATAAAAAGTAGTATT+TGG | + | chr1_3:60803222-60803241 | None:intergenic | 20.0% |
| !! | AAATTTAAACAACCAAAATG+AGG | + | chr1_3:60803324-60803343 | None:intergenic | 20.0% |
| !!! | ATTTTGGTTGTTTAAATTTC+AGG | - | chr1_3:60803325-60803344 | Msa0130500:intron | 20.0% |
| !!! | TTTTGGTTGTTTAAATTTCA+GGG | - | chr1_3:60803326-60803345 | Msa0130500:intron | 20.0% |
| !!! | ATACCATTTTTAGTATAATG+AGG | - | chr1_3:60803784-60803803 | Msa0130500:intron | 20.0% |
| !! | TATCCTCATTATACTAAAAA+TGG | + | chr1_3:60803790-60803809 | None:intergenic | 20.0% |
| !!! | TGCGATTTGATTTATTATTT+AGG | - | chr1_3:60803880-60803899 | Msa0130500:intron | 20.0% |
| !! | CTATTAAGTAAGAAATAACA+TGG | + | chr1_3:60804004-60804023 | None:intergenic | 20.0% |
| !!! | AGTTTAACTTATTCTTAATG+AGG | + | chr1_3:60804030-60804049 | None:intergenic | 20.0% |
| !! | AATTGATCACTAAATATATC+AGG | - | chr1_3:60804436-60804455 | Msa0130500:intron | 20.0% |
| !! | TAGTGTAATTAATGTTTAAC+TGG | - | chr1_3:60805240-60805259 | Msa0130500:five_prime_UTR | 20.0% |
| !!! | GTTTCTAGATTTTTGATCAA+GGG | + | chr1_3:60798598-60798617 | None:intergenic | 25.0% |
| ! | CTTGATCAAAAATCTAGAAA+CGG | - | chr1_3:60798597-60798616 | Msa0130500:three_prime_UTR | 25.0% |
| !!! | AAAATCTAGAAACGGATTAA+AGG | - | chr1_3:60798605-60798624 | Msa0130500:three_prime_UTR | 25.0% |
| !!! | AAATCTAGAAACGGATTAAA+GGG | - | chr1_3:60798606-60798625 | Msa0130500:three_prime_UTR | 25.0% |
| !!! | AATTTTGAAGAAAATGATGC+TGG | - | chr1_3:60798779-60798798 | Msa0130500:three_prime_UTR | 25.0% |
| !!! | ATTTTGAAGAAAATGATGCT+GGG | - | chr1_3:60798780-60798799 | Msa0130500:three_prime_UTR | 25.0% |
| !! | AATTTGTTTGATTAGGGAAT+GGG | - | chr1_3:60798961-60798980 | Msa0130500:intron | 25.0% |
| ! | GTAATAAGATCTATAGATAC+GGG | - | chr1_3:60799047-60799066 | Msa0130500:CDS | 25.0% |
| ! | TAATAAGATCTATAGATACG+GGG | - | chr1_3:60799048-60799067 | Msa0130500:CDS | 25.0% |
| ! | CTTACAATCTAAACACAAAT+TGG | + | chr1_3:60799566-60799585 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTATAACCGGATT+TGG | - | chr1_3:60799595-60799614 | Msa0130500:CDS | 25.0% |
| ! | AAATTGAGATGTATCAGTAT+GGG | - | chr1_3:60799759-60799778 | Msa0130500:intron | 25.0% |
| !! | ATTTAAGACATGATTTGAAC+TGG | + | chr1_3:60799884-60799903 | None:intergenic | 25.0% |
| ! | ATCATGTCTTAAATATCGAT+AGG | - | chr1_3:60799890-60799909 | Msa0130500:intron | 25.0% |
| !! | TCATAACATATCTTCCTTTT+TGG | - | chr1_3:60800007-60800026 | Msa0130500:CDS | 25.0% |
| ! | TTCTTCTATGTATACATCTT+GGG | - | chr1_3:60800276-60800295 | Msa0130500:intron | 25.0% |
| ! | GTAACATATCTTATGACTTA+TGG | - | chr1_3:60800313-60800332 | Msa0130500:CDS | 25.0% |
| ! | AGCATATAGAATATAAAGCT+TGG | + | chr1_3:60800529-60800548 | None:intergenic | 25.0% |
| ! | TATCGTCTGTTAATTTAGAT+CGG | + | chr1_3:60800670-60800689 | None:intergenic | 25.0% |
| ! | TTGGAACTGTCTTAAAAAAT+TGG | - | chr1_3:60800998-60801017 | Msa0130500:intron | 25.0% |
| ! | TTCATAATGTTGAATGAATG+TGG | + | chr1_3:60801035-60801054 | None:intergenic | 25.0% |
| ! | GCTTGTAATAGTTAATTGTA+AGG | - | chr1_3:60801123-60801142 | Msa0130500:intron | 25.0% |
| ! | TAATCAATTATAAAGCTGCA+AGG | - | chr1_3:60801169-60801188 | Msa0130500:intron | 25.0% |
| ! | TATATACTCTTCTATCAAAC+TGG | - | chr1_3:60801203-60801222 | Msa0130500:intron | 25.0% |
| ! | ATATACTCTTCTATCAAACT+GGG | - | chr1_3:60801204-60801223 | Msa0130500:intron | 25.0% |
| ! | ACTAATGAATGATATCTTAC+AGG | + | chr1_3:60801327-60801346 | None:intergenic | 25.0% |
| !!! | TATGCTCTGAAATTGAATAA+AGG | - | chr1_3:60801369-60801388 | Msa0130500:CDS | 25.0% |
| !!! | GTATTTTTTGTTCAAATCTC+TGG | - | chr1_3:60801481-60801500 | Msa0130500:intron | 25.0% |
| ! | ACTATTGTCTAAATCATACA+CGG | + | chr1_3:60801575-60801594 | None:intergenic | 25.0% |
| ! | AGACAATAGTTAATCTTTGT+TGG | - | chr1_3:60801585-60801604 | Msa0130500:intron | 25.0% |
| ! | GACAATAGTTAATCTTTGTT+GGG | - | chr1_3:60801586-60801605 | Msa0130500:intron | 25.0% |
| ! | ACATTAGTGATTAGAGTTTA+AGG | - | chr1_3:60801611-60801630 | Msa0130500:intron | 25.0% |
| ! | AAGGATAAAACAGAGAATTA+AGG | + | chr1_3:60801900-60801919 | None:intergenic | 25.0% |
| !!! | TTGGTAAGTATTGAATAGTA+AGG | + | chr1_3:60801999-60802018 | None:intergenic | 25.0% |
| ! | CAAATTTAGTAATGAGCATT+GGG | + | chr1_3:60802077-60802096 | None:intergenic | 25.0% |
| ! | TCAAATTTAGTAATGAGCAT+TGG | + | chr1_3:60802078-60802097 | None:intergenic | 25.0% |
| ! | GTTTGTAATACACTATTCTT+TGG | - | chr1_3:60802385-60802404 | Msa0130500:intron | 25.0% |
| !!! | TGAAACTTAGATTTTGATTG+GGG | - | chr1_3:60802445-60802464 | Msa0130500:intron | 25.0% |
| !! | CTTTTGCAATCATTATTAGA+AGG | + | chr1_3:60802475-60802494 | None:intergenic | 25.0% |
| ! | CTAATAATGATTGCAAAAGA+TGG | - | chr1_3:60802476-60802495 | Msa0130500:intron | 25.0% |
| ! | GATTATGATAAAAACAGTGA+CGG | + | chr1_3:60802688-60802707 | None:intergenic | 25.0% |
| !!! | CTGTTTTTATCATAATCTGA+TGG | - | chr1_3:60802691-60802710 | Msa0130500:intron | 25.0% |
| ! | TGCTGCAAAAAAGATAAAAT+GGG | + | chr1_3:60802976-60802995 | None:intergenic | 25.0% |
| ! | ATGCTGCAAAAAAGATAAAA+TGG | + | chr1_3:60802977-60802996 | None:intergenic | 25.0% |
| ! | ATACCATAAGATATCTAGAA+TGG | - | chr1_3:60803089-60803108 | Msa0130500:CDS | 25.0% |
| !!! | ACTACTTTTTATGCATTTAG+AGG | - | chr1_3:60803225-60803244 | Msa0130500:intron | 25.0% |
| ! | GGAAAGAAAATCAAAGAATA+AGG | + | chr1_3:60803303-60803322 | None:intergenic | 25.0% |
| !! | TTGATTTTCTTTCCTCATTT+TGG | - | chr1_3:60803309-60803328 | Msa0130500:intron | 25.0% |
| !! | ACTGTTCTTTTACTCTATAA+TGG | - | chr1_3:60803455-60803474 | Msa0130500:CDS | 25.0% |
| !!! | AAGTTATGCGTTATTTTTAC+TGG | - | chr1_3:60803823-60803842 | Msa0130500:intron | 25.0% |
| ! | TAGCTACATATTCTGATATA+AGG | + | chr1_3:60803981-60804000 | None:intergenic | 25.0% |
| ! | ACATAATGCATTTCAATAAC+CGG | - | chr1_3:60804080-60804099 | Msa0130500:intron | 25.0% |
| ! | TATTAACTGATATGCAATCA+AGG | + | chr1_3:60804218-60804237 | None:intergenic | 25.0% |
| !!! | TGATTTTTTTTTGTTGCCTT+TGG | - | chr1_3:60804609-60804628 | Msa0130500:intron | 25.0% |
| ! | ATATACGTATTATCTCACAA+TGG | - | chr1_3:60804753-60804772 | Msa0130500:intron | 25.0% |
| ! | TAAATACCTATGATAGTCAA+AGG | - | chr1_3:60805081-60805100 | Msa0130500:CDS | 25.0% |
| CAGAAACAATGAAAAATCCT+CGG | + | chr1_3:60798353-60798372 | None:intergenic | 30.0% | |
| !! | CGTTTCTAGATTTTTGATCA+AGG | + | chr1_3:60798599-60798618 | None:intergenic | 30.0% |
| CAGAATTTCAGGATAAAACT+AGG | + | chr1_3:60798671-60798690 | None:intergenic | 30.0% | |
| !!! | TTTGTGCTGTTGATGATTTT+TGG | - | chr1_3:60798695-60798714 | Msa0130500:three_prime_UTR | 30.0% |
| ! | TGGAGAGAATTTGTTTGATT+AGG | - | chr1_3:60798954-60798973 | Msa0130500:intron | 30.0% |
| ! | GGAGAGAATTTGTTTGATTA+GGG | - | chr1_3:60798955-60798974 | Msa0130500:intron | 30.0% |
| ! | GAATTTGTTTGATTAGGGAA+TGG | - | chr1_3:60798960-60798979 | Msa0130500:intron | 30.0% |
| AATAAGATCTATAGATACGG+GGG | - | chr1_3:60799049-60799068 | Msa0130500:CDS | 30.0% | |
| GCAAAAAAGTAGAGTTAGAA+AGG | - | chr1_3:60799163-60799182 | Msa0130500:intron | 30.0% | |
| TATTTCATAGCACACCAAAA+TGG | + | chr1_3:60799357-60799376 | None:intergenic | 30.0% | |
| !! | TTTTGGTGTGCTATGAAATA+TGG | - | chr1_3:60799357-60799376 | Msa0130500:CDS | 30.0% |
| !!! | TTTTTGTTTTCACCTTTCTG+AGG | - | chr1_3:60799395-60799414 | Msa0130500:CDS | 30.0% |
| ! | ATCTCAATTTGGTTTATGTC+TGG | + | chr1_3:60799749-60799768 | None:intergenic | 30.0% |
| CATACTGATACATCTCAATT+TGG | + | chr1_3:60799760-60799779 | None:intergenic | 30.0% | |
| CAAATTGAGATGTATCAGTA+TGG | - | chr1_3:60799758-60799777 | Msa0130500:intron | 30.0% | |
| TGCAACATAATATAAACAGC+AGG | + | chr1_3:60799814-60799833 | None:intergenic | 30.0% | |
| AATTTACATGGAACAGTCAA+AGG | + | chr1_3:60799853-60799872 | None:intergenic | 30.0% | |
| TTGACTGTTCCATGTAAATT+AGG | - | chr1_3:60799853-60799872 | Msa0130500:intron | 30.0% | |
| TGACTGTTCCATGTAAATTA+GGG | - | chr1_3:60799854-60799873 | Msa0130500:intron | 30.0% | |
| ATGTCTTAAATATCGATAGG+TGG | - | chr1_3:60799893-60799912 | Msa0130500:intron | 30.0% | |
| TGTCTTAAATATCGATAGGT+GGG | - | chr1_3:60799894-60799913 | Msa0130500:intron | 30.0% | |
| GAATCTCAGATTGTAGATTA+CGG | - | chr1_3:60799930-60799949 | Msa0130500:intron | 30.0% | |
| ! | AATTTGAAGTGTGTCTTACT+TGG | + | chr1_3:60800123-60800142 | None:intergenic | 30.0% |
| !!! | CAAATTTTTTGTCCTGTAGA+AGG | - | chr1_3:60800162-60800181 | Msa0130500:CDS | 30.0% |
| CTTCTTCTATGTATACATCT+TGG | - | chr1_3:60800275-60800294 | Msa0130500:intron | 30.0% | |
| !!! | TGATTGTTTTAATGATGCAG+TGG | - | chr1_3:60800408-60800427 | Msa0130500:CDS | 30.0% |
| !!! | TGATTTTGATTGACAACATC+AGG | - | chr1_3:60800476-60800495 | Msa0130500:CDS | 30.0% |
| AAAGCTTGGTAAGCTATAAA+TGG | + | chr1_3:60800515-60800534 | None:intergenic | 30.0% | |
| GCTGTTCAATCTCAAATTAA+CGG | - | chr1_3:60800731-60800750 | Msa0130500:intron | 30.0% | |
| TCCAACAGATATTACAAGAT+GGG | + | chr1_3:60800983-60801002 | None:intergenic | 30.0% | |
| TTCCAACAGATATTACAAGA+TGG | + | chr1_3:60800984-60801003 | None:intergenic | 30.0% | |
| TATACTCTTCTATCAAACTG+GGG | - | chr1_3:60801205-60801224 | Msa0130500:intron | 30.0% | |
| TGTATCTTTATAGGATGTGT+AGG | - | chr1_3:60801244-60801263 | Msa0130500:intron | 30.0% | |
| GTATCTTTATAGGATGTGTA+GGG | - | chr1_3:60801245-60801264 | Msa0130500:intron | 30.0% | |
| ! | CTTACCACATATCTTTAGAA+GGG | + | chr1_3:60802175-60802194 | None:intergenic | 30.0% |
| GCAAGACTTAATTTAGTACA+TGG | - | chr1_3:60802503-60802522 | Msa0130500:intron | 30.0% | |
| TAGTACATGGTTATCTGTTT+AGG | - | chr1_3:60802516-60802535 | Msa0130500:intron | 30.0% | |
| AGTACATGGTTATCTGTTTA+GGG | - | chr1_3:60802517-60802536 | Msa0130500:intron | 30.0% | |
| AAAGTAAACCTTGATCACAT+TGG | - | chr1_3:60802564-60802583 | Msa0130500:intron | 30.0% | |
| GTTTAGCTATCCCATAAAAA+AGG | - | chr1_3:60802586-60802605 | Msa0130500:intron | 30.0% | |
| !!! | AGCAGTGTATCCTTTTTTAT+GGG | + | chr1_3:60802599-60802618 | None:intergenic | 30.0% |
| ATAATTTCTCAATTACCTGC+AGG | - | chr1_3:60802835-60802854 | Msa0130500:intron | 30.0% | |
| ! | TGGGACTTGTTTATTAACTA+TGG | - | chr1_3:60802880-60802899 | Msa0130500:intron | 30.0% |
| ! | GGGACTTGTTTATTAACTAT+GGG | - | chr1_3:60802881-60802900 | Msa0130500:intron | 30.0% |
| AATCCTACAATTCATGGAAA+CGG | - | chr1_3:60803037-60803056 | Msa0130500:intron | 30.0% | |
| ACTCCATTCTAGATATCTTA+TGG | + | chr1_3:60803095-60803114 | None:intergenic | 30.0% | |
| AGTATTTGGAAAGCAATGAA+TGG | + | chr1_3:60803208-60803227 | None:intergenic | 30.0% | |
| CGCAAAAGATATACCAATTT+GGG | - | chr1_3:60803361-60803380 | Msa0130500:intron | 30.0% | |
| GGAGAAAAAATTACCCAAAT+TGG | + | chr1_3:60803377-60803396 | None:intergenic | 30.0% | |
| AACAACGTTCAAGAATTTCT+AGG | + | chr1_3:60803620-60803639 | None:intergenic | 30.0% | |
| AACTGACATGAAGAATTTGT+CGG | - | chr1_3:60803641-60803660 | Msa0130500:intron | 30.0% | |
| ! | TCTTTTATAACTCGCAGATT+TGG | - | chr1_3:60804104-60804123 | Msa0130500:intron | 30.0% |
| GCAATTCTTAGCAGTTAAAA+TGG | - | chr1_3:60804307-60804326 | Msa0130500:intron | 30.0% | |
| TAGCATTCTTGTTAGTTAGA+AGG | - | chr1_3:60804350-60804369 | Msa0130500:intron | 30.0% | |
| TCAGTCTACACATCATATAT+AGG | + | chr1_3:60804719-60804738 | None:intergenic | 30.0% | |
| ! | CAATATTGAAAGCTCGTTTT+TGG | - | chr1_3:60804913-60804932 | Msa0130500:intron | 30.0% |
| TGTTGAAGTCTATATGAACT+AGG | - | chr1_3:60804979-60804998 | Msa0130500:CDS | 30.0% | |
| AAGTTTCCTTTGACTATCAT+AGG | + | chr1_3:60805090-60805109 | None:intergenic | 30.0% | |
| AGGAAACTTTGTTGAATGTT+TGG | - | chr1_3:60805101-60805120 | Msa0130500:exon | 30.0% | |
| AAACAATGAAAAATCCTCGG+AGG | + | chr1_3:60798350-60798369 | None:intergenic | 35.0% | |
| TTCGAAGAAGAGTAATGAGT+TGG | - | chr1_3:60798444-60798463 | Msa0130500:three_prime_UTR | 35.0% | |
| ! | AAGAGTAATGAGTTGGAGAA+GGG | - | chr1_3:60798451-60798470 | Msa0130500:three_prime_UTR | 35.0% |
| ACCATGAGAAAAGGAAGAAA+CGG | + | chr1_3:60798553-60798572 | None:intergenic | 35.0% | |
| AAACTTACCACCATGAGAAA+AGG | + | chr1_3:60798562-60798581 | None:intergenic | 35.0% | |
| ! | CTAGATTTTTGATCAAGGGT+TGG | + | chr1_3:60798594-60798613 | None:intergenic | 35.0% |
| GCACAAAAACTCAGAATTTC+AGG | + | chr1_3:60798682-60798701 | None:intergenic | 35.0% | |
| GGACACAAATACAACACAAA+GGG | + | chr1_3:60798920-60798939 | None:intergenic | 35.0% | |
| AGGACACAAATACAACACAA+AGG | + | chr1_3:60798921-60798940 | None:intergenic | 35.0% | |
| TTACTCTAGTTGCAAAGCTA+CGG | + | chr1_3:60799131-60799150 | None:intergenic | 35.0% | |
| AACTAGAGTAACTTCACAGA+TGG | - | chr1_3:60799140-60799159 | Msa0130500:intron | 35.0% | |
| ACTAGAGTAACTTCACAGAT+GGG | - | chr1_3:60799141-60799160 | Msa0130500:intron | 35.0% | |
| TAGAGTTAGAAAGGAGCTTT+GGG | - | chr1_3:60799172-60799191 | Msa0130500:intron | 35.0% | |
| ACTAAACTAAGACACCAGAT+TGG | - | chr1_3:60799201-60799220 | Msa0130500:intron | 35.0% | |
| TTGTTGAGAATGTGTCTAGT+TGG | - | chr1_3:60799503-60799522 | Msa0130500:intron | 35.0% | |
| AACAGTCAAAGGTTTATGTC+TGG | + | chr1_3:60799842-60799861 | None:intergenic | 35.0% | |
| GACTGTTCCATGTAAATTAG+GGG | - | chr1_3:60799855-60799874 | Msa0130500:intron | 35.0% | |
| GTCTTAAATATCGATAGGTG+GGG | - | chr1_3:60799895-60799914 | Msa0130500:intron | 35.0% | |
| TCTTAAATATCGATAGGTGG+GGG | - | chr1_3:60799896-60799915 | Msa0130500:intron | 35.0% | |
| !! | AACATATCTTCCTTTTTGGC+AGG | - | chr1_3:60800011-60800030 | Msa0130500:CDS | 35.0% |
| AAAATACAGTCCTGCCAAAA+AGG | + | chr1_3:60800024-60800043 | None:intergenic | 35.0% | |
| !! | GGACTGTATTTTTACCTCTT+TGG | - | chr1_3:60800032-60800051 | Msa0130500:CDS | 35.0% |
| ACAACATGAAAAAGCCAAAG+AGG | + | chr1_3:60800049-60800068 | None:intergenic | 35.0% | |
| AAATTGTCTTCTCTGTTTCG+TGG | - | chr1_3:60800138-60800157 | Msa0130500:CDS | 35.0% | |
| ATCAATTCAAAAGCGATGAG+AGG | + | chr1_3:60800457-60800476 | None:intergenic | 35.0% | |
| ! | CATTGCACAGTTTTCAATGT+TGG | - | chr1_3:60800640-60800659 | Msa0130500:intron | 35.0% |
| TGACATGAGTAGTGCTTATA+AGG | - | chr1_3:60800838-60800857 | Msa0130500:intron | 35.0% | |
| GAGTAGTGCTTATAAGGTTT+CGG | - | chr1_3:60800844-60800863 | Msa0130500:intron | 35.0% | |
| GATAAACTTTCAATAGGAGC+TGG | - | chr1_3:60800929-60800948 | Msa0130500:intron | 35.0% | |
| CAACAGATATTACAAGATGG+GGG | + | chr1_3:60800981-60801000 | None:intergenic | 35.0% | |
| CCAACAGATATTACAAGATG+GGG | + | chr1_3:60800982-60801001 | None:intergenic | 35.0% | |
| ATATGACAGATGAAGCAGTA+TGG | - | chr1_3:60801292-60801311 | Msa0130500:intron | 35.0% | |
| TATGACAGATGAAGCAGTAT+GGG | - | chr1_3:60801293-60801312 | Msa0130500:intron | 35.0% | |
| !! | CTATTTCAGGAGTATCACTT+AGG | + | chr1_3:60801397-60801416 | None:intergenic | 35.0% |
| CTAAGTGATACTCCTGAAAT+AGG | - | chr1_3:60801395-60801414 | Msa0130500:CDS | 35.0% | |
| ! | TAGATGTCAGATAGGGTATT+CGG | + | chr1_3:60801423-60801442 | None:intergenic | 35.0% |
| TTAGAGTTTAAGGACCTGTT+TGG | - | chr1_3:60801621-60801640 | Msa0130500:intron | 35.0% | |
| GTTTCTAATGTGTACAGGAA+AGG | + | chr1_3:60801789-60801808 | None:intergenic | 35.0% | |
| ! | TTCGTGTTTCTAATGTGTAC+AGG | + | chr1_3:60801794-60801813 | None:intergenic | 35.0% |
| !! | ACAAATGGTTCTGACATAAC+AGG | + | chr1_3:60801954-60801973 | None:intergenic | 35.0% |
| GGGAAAATAGAAAAGCAAGA+TGG | + | chr1_3:60802057-60802076 | None:intergenic | 35.0% | |
| !! | ATTCTGTTTTTCAGCACTTC+TGG | - | chr1_3:60802106-60802125 | Msa0130500:intron | 35.0% |
| CTTCTGGATTTCAATATCCA+TGG | - | chr1_3:60802122-60802141 | Msa0130500:intron | 35.0% | |
| ! | TTCACCCTTCTAAAGATATG+TGG | - | chr1_3:60802168-60802187 | Msa0130500:intron | 35.0% |
| GCTTACCACATATCTTTAGA+AGG | + | chr1_3:60802176-60802195 | None:intergenic | 35.0% | |
| AGTCAACAATTGTTTCAGAG+AGG | + | chr1_3:60802207-60802226 | None:intergenic | 35.0% | |
| GTACATGGTTATCTGTTTAG+GGG | - | chr1_3:60802518-60802537 | Msa0130500:intron | 35.0% | |
| TAGCTAAACCAATGTGATCA+AGG | + | chr1_3:60802575-60802594 | None:intergenic | 35.0% | |
| !!! | CAGCAGTGTATCCTTTTTTA+TGG | + | chr1_3:60802600-60802619 | None:intergenic | 35.0% |
| ! | TATCTAGAATGGAGTAGAGA+AGG | - | chr1_3:60803100-60803119 | Msa0130500:CDS | 35.0% |
| TAAATTTCAGGGAACACCAT+CGG | - | chr1_3:60803337-60803356 | Msa0130500:intron | 35.0% | |
| GCGCAAAAGATATACCAATT+TGG | - | chr1_3:60803360-60803379 | Msa0130500:intron | 35.0% | |
| GATATAGATGAGTAGCTTCT+AGG | + | chr1_3:60803488-60803507 | None:intergenic | 35.0% | |
| TGAAAAACCCAAAGCAATCA+CGG | + | chr1_3:60803520-60803539 | None:intergenic | 35.0% | |
| !! | TGCTTTGGGTTTTTCAATCA+CGG | - | chr1_3:60803524-60803543 | Msa0130500:intron | 35.0% |
| ! | AGGCATTTTCTTCACTGTAT+CGG | + | chr1_3:60803922-60803941 | None:intergenic | 35.0% |
| AGAAGTTACAAAATACAGCC+AGG | - | chr1_3:60804156-60804175 | Msa0130500:intron | 35.0% | |
| ! | GAAGTTTTTCATATTCCTCC+TGG | + | chr1_3:60804177-60804196 | None:intergenic | 35.0% |
| ACAACTGTTCTCTTATGATG+TGG | + | chr1_3:60804270-60804289 | None:intergenic | 35.0% | |
| ! | CTTTGAAGAGCAGATTAATG+TGG | - | chr1_3:60804481-60804500 | Msa0130500:intron | 35.0% |
| TATTATCTCACAATGGCTTG+TGG | - | chr1_3:60804760-60804779 | Msa0130500:intron | 35.0% | |
| GCAGATACATTAATCACACT+TGG | + | chr1_3:60804804-60804823 | None:intergenic | 35.0% | |
| CTTTGTTGAATGTTTGGTTG+AGG | - | chr1_3:60805107-60805126 | Msa0130500:exon | 35.0% | |
| ! | TCACTTAATGCTGTTTGATG+TGG | - | chr1_3:60805166-60805185 | Msa0130500:five_prime_UTR | 35.0% |
| ! | AAAAAGAGTGTGCGTGACTT+TGG | + | chr1_3:60798309-60798328 | None:intergenic | 40.0% |
| ! | GAAGAGTAATGAGTTGGAGA+AGG | - | chr1_3:60798450-60798469 | Msa0130500:three_prime_UTR | 40.0% |
| ! | ACCGTTTCTTCCTTTTCTCA+TGG | - | chr1_3:60798549-60798568 | Msa0130500:three_prime_UTR | 40.0% |
| ! | GTTTCTTCCTTTTCTCATGG+TGG | - | chr1_3:60798552-60798571 | Msa0130500:three_prime_UTR | 40.0% |
| TTGACACATGCATTGAAAGG+GGG | + | chr1_3:60798735-60798754 | None:intergenic | 40.0% | |
| CTTGACACATGCATTGAAAG+GGG | + | chr1_3:60798736-60798755 | None:intergenic | 40.0% | |
| CCTTGACACATGCATTGAAA+GGG | + | chr1_3:60798737-60798756 | None:intergenic | 40.0% | |
| ! | TTTGGAATAGGGACTCTGTA+AGG | - | chr1_3:60798882-60798901 | Msa0130500:intron | 40.0% |
| TTGGAATAGGGACTCTGTAA+GGG | - | chr1_3:60798883-60798902 | Msa0130500:intron | 40.0% | |
| GTGTCCTAGTGTAGTGAAAT+TGG | - | chr1_3:60798934-60798953 | Msa0130500:intron | 40.0% | |
| CTCTCCAATTTCACTACACT+AGG | + | chr1_3:60798941-60798960 | None:intergenic | 40.0% | |
| GTAGAGTTAGAAAGGAGCTT+TGG | - | chr1_3:60799171-60799190 | Msa0130500:intron | 40.0% | |
| ! | AGTGGACATTTTCTCCAATC+TGG | + | chr1_3:60799218-60799237 | None:intergenic | 40.0% |
| AGCAGATGCACAAAATACAG+TGG | - | chr1_3:60799248-60799267 | Msa0130500:intron | 40.0% | |
| !! | TTTTCCTTTGGCTTATGCGT+CGG | + | chr1_3:60799288-60799307 | None:intergenic | 40.0% |
| GATAAGTAGTCCATCCCTAA+CGG | + | chr1_3:60799623-60799642 | None:intergenic | 40.0% | |
| !! | TTAGGGATGGACTACTTATC+CGG | - | chr1_3:60799623-60799642 | Msa0130500:CDS | 40.0% |
| TCTTCCATACGTCTTACCTA+GGG | + | chr1_3:60799662-60799681 | None:intergenic | 40.0% | |
| !! | AGAGATACCAGAGAAGTATC+TGG | - | chr1_3:60799679-60799698 | Msa0130500:intron | 40.0% |
| !! | GAGATACCAGAGAAGTATCT+GGG | - | chr1_3:60799680-60799699 | Msa0130500:intron | 40.0% |
| AAAAGTCCCAGATACTTCTC+TGG | + | chr1_3:60799689-60799708 | None:intergenic | 40.0% | |
| TTTCATGTTGTGATAGCACG+AGG | - | chr1_3:60800058-60800077 | Msa0130500:CDS | 40.0% | |
| CAGCAACAAAAACCTTCTAC+AGG | + | chr1_3:60800177-60800196 | None:intergenic | 40.0% | |
| ! | CTATTTTGTTCACGTGCAGT+GGG | - | chr1_3:60800205-60800224 | Msa0130500:intron | 40.0% |
| GTAGCTATGACTGAATGACA+AGG | + | chr1_3:60800233-60800252 | None:intergenic | 40.0% | |
| AGTCATAGCTACACCATTAC+TGG | - | chr1_3:60800241-60800260 | Msa0130500:intron | 40.0% | |
| ATACATCTTGGGAGCAGTTA+TGG | - | chr1_3:60800287-60800306 | Msa0130500:intron | 40.0% | |
| GACTTATGGCACAACTATCA+TGG | - | chr1_3:60800327-60800346 | Msa0130500:CDS | 40.0% | |
| CTTCAAATCTGCCTAAACTG+TGG | - | chr1_3:60800547-60800566 | Msa0130500:intron | 40.0% | |
| TGCCACATTTAAGGAGTCTA+GGG | + | chr1_3:60800578-60800597 | None:intergenic | 40.0% | |
| TTGCCACATTTAAGGAGTCT+AGG | + | chr1_3:60800579-60800598 | None:intergenic | 40.0% | |
| CTCCTTAAATGTGGCAACTT+TGG | - | chr1_3:60800582-60800601 | Msa0130500:intron | 40.0% | |
| GTCCAAAGTTGCCACATTTA+AGG | + | chr1_3:60800587-60800606 | None:intergenic | 40.0% | |
| AAACTGTGCAATGCTGTTAC+AGG | + | chr1_3:60800633-60800652 | None:intergenic | 40.0% | |
| TTGTATGTTTATCCTGCAGC+AGG | - | chr1_3:60800763-60800782 | Msa0130500:intron | 40.0% | |
| TACCTTGCAAGTCAGTCTTA+TGG | - | chr1_3:60800874-60800893 | Msa0130500:intron | 40.0% | |
| CCCCATCTTGTAATATCTGT+TGG | - | chr1_3:60800979-60800998 | Msa0130500:intron | 40.0% | |
| GTTAATTGTAAGGCTGCACA+TGG | - | chr1_3:60801133-60801152 | Msa0130500:intron | 40.0% | |
| ! | GTCATATTTTCCTCATCTCC+AGG | + | chr1_3:60801279-60801298 | None:intergenic | 40.0% |
| TACCCTATCTGACATCTACT+TGG | - | chr1_3:60801425-60801444 | Msa0130500:intron | 40.0% | |
| TGCCAAGTAGATGTCAGATA+GGG | + | chr1_3:60801430-60801449 | None:intergenic | 40.0% | |
| TTGCCAAGTAGATGTCAGAT+AGG | + | chr1_3:60801431-60801450 | None:intergenic | 40.0% | |
| TGGGTATAGTCGATATCTCT+TGG | - | chr1_3:60802900-60802919 | Msa0130500:intron | 40.0% | |
| TGGCACAATCCTACAATTCA+TGG | - | chr1_3:60803031-60803050 | Msa0130500:intron | 40.0% | |
| TGACCGTTTCCATGAATTGT+AGG | + | chr1_3:60803043-60803062 | None:intergenic | 40.0% | |
| ATGGTATTTGACGACGAACA+TGG | + | chr1_3:60803076-60803095 | None:intergenic | 40.0% | |
| ! | AAATGTGTTTTGCAGTCTGC+AGG | - | chr1_3:60803156-60803175 | Msa0130500:intron | 40.0% |
| ! | TTTTGCAGTCTGCAGGATAT+TGG | - | chr1_3:60803163-60803182 | Msa0130500:intron | 40.0% |
| AAATTTCAGGGAACACCATC+GGG | - | chr1_3:60803338-60803357 | Msa0130500:intron | 40.0% | |
| TCAAAATCCCGTGATTGCTT+TGG | - | chr1_3:60803509-60803528 | Msa0130500:intron | 40.0% | |
| CAAAATCCCGTGATTGCTTT+GGG | - | chr1_3:60803510-60803529 | Msa0130500:intron | 40.0% | |
| GAAAAACCCAAAGCAATCAC+GGG | + | chr1_3:60803519-60803538 | None:intergenic | 40.0% | |
| !! | GGTTTTTCAATCACGGATCA+AGG | - | chr1_3:60803531-60803550 | Msa0130500:intron | 40.0% |
| TGACATGAAGAATTTGTCGG+TGG | - | chr1_3:60803644-60803663 | Msa0130500:intron | 40.0% | |
| AATAGACGAAGGAAGTAGAG+AGG | - | chr1_3:60803706-60803725 | Msa0130500:intron | 40.0% | |
| !!! | TTTTTTGCGCTGGAAGTTCA+GGG | - | chr1_3:60803741-60803760 | Msa0130500:intron | 40.0% |
| ! | CATTTTCTTCACTGTATCGG+GGG | + | chr1_3:60803919-60803938 | None:intergenic | 40.0% |
| ! | GCATTTTCTTCACTGTATCG+GGG | + | chr1_3:60803920-60803939 | None:intergenic | 40.0% |
| ! | GGCATTTTCTTCACTGTATC+GGG | + | chr1_3:60803921-60803940 | None:intergenic | 40.0% |
| ACAGTGAAGAAAATGCCTAG+AGG | - | chr1_3:60803924-60803943 | Msa0130500:intron | 40.0% | |
| CAGTGAAGAAAATGCCTAGA+GGG | - | chr1_3:60803925-60803944 | Msa0130500:intron | 40.0% | |
| AGTGAAGAAAATGCCTAGAG+GGG | - | chr1_3:60803926-60803945 | Msa0130500:intron | 40.0% | |
| TCTGCGAGTTATAAAAGAGC+CGG | + | chr1_3:60804102-60804121 | None:intergenic | 40.0% | |
| AGTTACAAAATACAGCCAGG+AGG | - | chr1_3:60804159-60804178 | Msa0130500:intron | 40.0% | |
| ACTAACAAGAATGCTACTCG+TGG | + | chr1_3:60804346-60804365 | None:intergenic | 40.0% | |
| ! | ACTGCACTGATACATATCTC+AGG | - | chr1_3:60804567-60804586 | Msa0130500:intron | 40.0% |
| ! | CTGCACTGATACATATCTCA+GGG | - | chr1_3:60804568-60804587 | Msa0130500:intron | 40.0% |
| ACACATCAGAAGTCAACCAA+AGG | + | chr1_3:60804628-60804647 | None:intergenic | 40.0% | |
| !!! | ATGGCTTGTGGTTTTAGATG+AGG | - | chr1_3:60804772-60804791 | Msa0130500:intron | 40.0% |
| TGCAGCAATGCACAGTTTAA+GGG | + | chr1_3:60804895-60804914 | None:intergenic | 40.0% | |
| TTGCAGCAATGCACAGTTTA+AGG | + | chr1_3:60804896-60804915 | None:intergenic | 40.0% | |
| TATGAATCCTTAACTGCGCA+TGG | + | chr1_3:60805012-60805031 | None:intergenic | 40.0% | |
| CTGAAGAGAGAGAGAAAGGT+TGG | + | chr1_3:60798389-60798408 | None:intergenic | 45.0% | |
| GAGACTGAAGAGAGAGAGAA+AGG | + | chr1_3:60798393-60798412 | None:intergenic | 45.0% | |
| TTCAGTCTCTGCGATTTCTG+CGG | - | chr1_3:60798404-60798423 | Msa0130500:three_prime_UTR | 45.0% | |
| GAGAACAAGGAGAAGAGAGA+AGG | + | chr1_3:60798522-60798541 | None:intergenic | 45.0% | |
| AACGGTCAAGCTTGAGAACA+AGG | + | chr1_3:60798535-60798554 | None:intergenic | 45.0% | |
| CCCTTTCAATGCATGTGTCA+AGG | - | chr1_3:60798734-60798753 | Msa0130500:three_prime_UTR | 45.0% | |
| GCCTTGACACATGCATTGAA+AGG | + | chr1_3:60798738-60798757 | None:intergenic | 45.0% | |
| CATCTGCTTCATCGTTAGAG+TGG | + | chr1_3:60799236-60799255 | None:intergenic | 45.0% | |
| ! | TTTCCTTTGGCTTATGCGTC+GGG | + | chr1_3:60799287-60799306 | None:intergenic | 45.0% |
| CTTCACATGCATCCTCAGAA+AGG | + | chr1_3:60799410-60799429 | None:intergenic | 45.0% | |
| CTGAGGATGCATGTGAAGTT+AGG | - | chr1_3:60799412-60799431 | Msa0130500:intron | 45.0% | |
| ACCTGTGTTGTGCCATATCT+GGG | - | chr1_3:60799538-60799557 | Msa0130500:intron | 45.0% | |
| CACAAATTGGCACCCAGATA+TGG | + | chr1_3:60799553-60799572 | None:intergenic | 45.0% | |
| TAACCGGATTTGGATCCGTT+AGG | - | chr1_3:60799605-60799624 | Msa0130500:CDS | 45.0% | |
| AACCGGATTTGGATCCGTTA+GGG | - | chr1_3:60799606-60799625 | Msa0130500:CDS | 45.0% | |
| ! | ATCCCTAACGGATCCAAATC+CGG | + | chr1_3:60799611-60799630 | None:intergenic | 45.0% |
| CTCTTCCATACGTCTTACCT+AGG | + | chr1_3:60799663-60799682 | None:intergenic | 45.0% | |
| GAGATGTATCAGTATGGGTG+TGG | - | chr1_3:60799764-60799783 | Msa0130500:intron | 45.0% | |
| ATGTATCAGTATGGGTGTGG+TGG | - | chr1_3:60799767-60799786 | Msa0130500:intron | 45.0% | |
| TGTATCAGTATGGGTGTGGT+GGG | - | chr1_3:60799768-60799787 | Msa0130500:intron | 45.0% | |
| CTGGTAGCCCCTAATTTACA+TGG | + | chr1_3:60799865-60799884 | None:intergenic | 45.0% | |
| !! | GCTATTTTGTTCACGTGCAG+TGG | - | chr1_3:60800204-60800223 | Msa0130500:intron | 45.0% |
| CATAGCTACACCATTACTGG+TGG | - | chr1_3:60800244-60800263 | Msa0130500:intron | 45.0% | |
| AGCTCAAATGCCACCAGTAA+TGG | + | chr1_3:60800257-60800276 | None:intergenic | 45.0% | |
| GACAACATCAGGTACTTGTC+TGG | - | chr1_3:60800487-60800506 | Msa0130500:CDS | 45.0% | |
| GTCCCTAGACTCCTTAAATG+TGG | - | chr1_3:60800573-60800592 | Msa0130500:intron | 45.0% | |
| AATGCTGTTACAGGAGCAGA+AGG | + | chr1_3:60800624-60800643 | None:intergenic | 45.0% | |
| TTATCCTGCAGCAGGCAATA+CGG | - | chr1_3:60800771-60800790 | Msa0130500:intron | 45.0% | |
| !! | CTCCATAAGACTGACTTGCA+AGG | + | chr1_3:60800879-60800898 | None:intergenic | 45.0% |
| ! | CTTTAGAAGGGTGAACACTG+TGG | + | chr1_3:60802163-60802182 | None:intergenic | 45.0% |
| ATTAGGATGCAGAGAGGTCA+AGG | + | chr1_3:60802284-60802303 | None:intergenic | 45.0% | |
| CACTCAATTAGGATGCAGAG+AGG | + | chr1_3:60802290-60802309 | None:intergenic | 45.0% | |
| ATCCTAATTGAGTGCGCAGT+TGG | - | chr1_3:60802296-60802315 | Msa0130500:intron | 45.0% | |
| AACCAACTGCGCACTCAATT+AGG | + | chr1_3:60802301-60802320 | None:intergenic | 45.0% | |
| CGTTTCTCGTTTGTACGAAG+TGG | - | chr1_3:60803011-60803030 | Msa0130500:intron | 45.0% | |
| AGCTCCTTGCAACAGAAGAA+GGG | + | chr1_3:60803399-60803418 | None:intergenic | 45.0% | |
| ACTTCCAGCGCAAAAAAGTC+TGG | + | chr1_3:60803738-60803757 | None:intergenic | 45.0% | |
| !!! | CTTTTTTGCGCTGGAAGTTC+AGG | - | chr1_3:60803740-60803759 | Msa0130500:intron | 45.0% |
| CAAAGAACGTGATGCTTGCA+GGG | + | chr1_3:60804515-60804534 | None:intergenic | 45.0% | |
| GTATCAGTGCAGTGACACAA+AGG | + | chr1_3:60804560-60804579 | None:intergenic | 45.0% | |
| ATGCACAGTTTAAGGGAGGT+GGG | + | chr1_3:60804888-60804907 | None:intergenic | 45.0% | |
| AATGCACAGTTTAAGGGAGG+TGG | + | chr1_3:60804889-60804908 | None:intergenic | 45.0% | |
| AGCAATGCACAGTTTAAGGG+AGG | + | chr1_3:60804892-60804911 | None:intergenic | 45.0% | |
| AATGCTACCATGCGCAGTTA+AGG | - | chr1_3:60805002-60805021 | Msa0130500:CDS | 45.0% | |
| !! | AGTGTGCGTGACTTTGGAAC+AGG | + | chr1_3:60798303-60798322 | None:intergenic | 50.0% |
| CTGCGGCAACACAAAAATGC+TGG | - | chr1_3:60798421-60798440 | Msa0130500:three_prime_UTR | 50.0% | |
| CACACAGCACGCAATTGAAG+GGG | + | chr1_3:60798814-60798833 | None:intergenic | 50.0% | |
| CCACACAGCACGCAATTGAA+GGG | + | chr1_3:60798815-60798834 | None:intergenic | 50.0% | |
| ACCACACAGCACGCAATTGA+AGG | + | chr1_3:60798816-60798835 | None:intergenic | 50.0% | |
| CCAAAGGAAAATTGCCCCTG+CGG | - | chr1_3:60799297-60799316 | Msa0130500:intron | 50.0% | |
| TCACAATCTCGGTGGTGAAG+AGG | - | chr1_3:60799327-60799346 | Msa0130500:intron | 50.0% | |
| CACAATCTCGGTGGTGAAGA+GGG | - | chr1_3:60799328-60799347 | Msa0130500:intron | 50.0% | |
| ! | GGTGAAGAGGGACTCCATTT+TGG | - | chr1_3:60799340-60799359 | Msa0130500:intron | 50.0% |
| GACCTGTGTTGTGCCATATC+TGG | - | chr1_3:60799537-60799556 | Msa0130500:intron | 50.0% | |
| ACCCAGATATGGCACAACAC+AGG | + | chr1_3:60799542-60799561 | None:intergenic | 50.0% | |
| GGATTTGGATCCGTTAGGGA+TGG | - | chr1_3:60799610-60799629 | Msa0130500:CDS | 50.0% | |
| ! | ATATCGATAGGTGGGGGTGT+TGG | - | chr1_3:60799902-60799921 | Msa0130500:intron | 50.0% |
| !! | TATCGATAGGTGGGGGTGTT+GGG | - | chr1_3:60799903-60799922 | Msa0130500:intron | 50.0% |
| ATGTTGTGATAGCACGAGGC+AGG | - | chr1_3:60800062-60800081 | Msa0130500:CDS | 50.0% | |
| CTAGGGACAGACCACAGTTT+AGG | + | chr1_3:60800561-60800580 | None:intergenic | 50.0% | |
| AGGCAATACGGATCTGAGTG+AGG | - | chr1_3:60800783-60800802 | Msa0130500:intron | 50.0% | |
| GGCAATACGGATCTGAGTGA+GGG | - | chr1_3:60800784-60800803 | Msa0130500:intron | 50.0% | |
| AATACGGATCTGAGTGAGGG+TGG | - | chr1_3:60800787-60800806 | Msa0130500:intron | 50.0% | |
| ATACGGATCTGAGTGAGGGT+GGG | - | chr1_3:60800788-60800807 | Msa0130500:intron | 50.0% | |
| ! | ATGTGTAGGGCTTTGATGCC+TGG | - | chr1_3:60801258-60801277 | Msa0130500:intron | 50.0% |
| !! | GGGTATTCGGTGCCTATTTC+AGG | + | chr1_3:60801410-60801429 | None:intergenic | 50.0% |
| GGCAGCAACAAAGAAGACCA+TGG | + | chr1_3:60802142-60802161 | None:intergenic | 50.0% | |
| CAGAGAGGTCAAGGAAAGGT+AGG | + | chr1_3:60802275-60802294 | None:intergenic | 50.0% | |
| GATGCAGAGAGGTCAAGGAA+AGG | + | chr1_3:60802279-60802298 | None:intergenic | 50.0% | |
| TGCAGTCTGCAGGATATTGG+CGG | - | chr1_3:60803166-60803185 | Msa0130500:intron | 50.0% | |
| GCGTTGCTCTTGCACTTTGT+AGG | - | chr1_3:60803274-60803293 | Msa0130500:CDS | 50.0% | |
| ! | GGTATATCTTTTGCGCCCGA+TGG | + | chr1_3:60803356-60803375 | None:intergenic | 50.0% |
| TCTCCCCTTCTTCTGTTGCA+AGG | - | chr1_3:60803392-60803411 | Msa0130500:intron | 50.0% | |
| GCTCCTTGCAACAGAAGAAG+GGG | + | chr1_3:60803398-60803417 | None:intergenic | 50.0% | |
| CAGCTCCTTGCAACAGAAGA+AGG | + | chr1_3:60803400-60803419 | None:intergenic | 50.0% | |
| CTTCTTCTGTTGCAAGGAGC+TGG | - | chr1_3:60803398-60803417 | Msa0130500:intron | 50.0% | |
| !! | GGTTGGTGGTCAATAGACGA+AGG | - | chr1_3:60803695-60803714 | Msa0130500:intron | 50.0% |
| !!! | GAAGCCAGACTTTTTTGCGC+TGG | - | chr1_3:60803731-60803750 | Msa0130500:intron | 50.0% |
| TCCTCAACAAGTTCCCCTCT+AGG | + | chr1_3:60803942-60803961 | None:intergenic | 50.0% | |
| !! | TAGAGGGGAACTTGTTGAGG+AGG | - | chr1_3:60803941-60803960 | Msa0130500:intron | 50.0% |
| TGGAGACTTCAAGCTGCACT+TGG | - | chr1_3:60804124-60804143 | Msa0130500:intron | 50.0% | |
| GCAAAGAACGTGATGCTTGC+AGG | + | chr1_3:60804516-60804535 | None:intergenic | 50.0% | |
| GCAAGCATCACGTTCTTTGC+AGG | - | chr1_3:60804516-60804535 | Msa0130500:intron | 50.0% | |
| TCCGTTCTTCGATTGTCCCA+CGG | + | chr1_3:60804694-60804713 | None:intergenic | 50.0% | |
| TGCACAGTTTAAGGGAGGTG+GGG | + | chr1_3:60804887-60804906 | None:intergenic | 50.0% | |
| GATTCATATCGCTGTCGCTG+AGG | - | chr1_3:60805024-60805043 | Msa0130500:CDS | 50.0% | |
| CTTCTTCTTCGCAACCTCCG+AGG | - | chr1_3:60798333-60798352 | Msa0130500:three_prime_UTR | 55.0% | |
| CCCTTCAATTGCGTGCTGTG+TGG | - | chr1_3:60798812-60798831 | Msa0130500:exon | 55.0% | |
| ! | CCGCAGGGGCAATTTTCCTT+TGG | + | chr1_3:60799300-60799319 | None:intergenic | 55.0% |
| ATTGTGATTGCGCACCGCAG+GGG | + | chr1_3:60799314-60799333 | None:intergenic | 55.0% | |
| GATTGTGATTGCGCACCGCA+GGG | + | chr1_3:60799315-60799334 | None:intergenic | 55.0% | |
| AGATTGTGATTGCGCACCGC+AGG | + | chr1_3:60799316-60799335 | None:intergenic | 55.0% | |
| GCGGTGCGCAATCACAATCT+CGG | - | chr1_3:60799316-60799335 | Msa0130500:intron | 55.0% | |
| GTGCGCAATCACAATCTCGG+TGG | - | chr1_3:60799319-60799338 | Msa0130500:intron | 55.0% | |
| CTAGGGCTGCTCACTGTATC+CGG | + | chr1_3:60799645-60799664 | None:intergenic | 55.0% | |
| GCAGCCCTAGGTAAGACGTA+TGG | - | chr1_3:60799655-60799674 | Msa0130500:intron | 55.0% | |
| CTGCTCCTTCGATGCCTCAT+GGG | - | chr1_3:60800095-60800114 | Msa0130500:CDS | 55.0% | |
| TGTCTTACTTGGCGCCCATG+AGG | + | chr1_3:60800112-60800131 | None:intergenic | 55.0% | |
| GGAGCAGAAGGCTGCAATGA+AGG | + | chr1_3:60800612-60800631 | None:intergenic | 55.0% | |
| AGATCCGTATTGCCTGCTGC+AGG | + | chr1_3:60800778-60800797 | None:intergenic | 55.0% | |
| ! | GGCTTTGATGCCTGGAGATG+AGG | - | chr1_3:60801266-60801285 | Msa0130500:intron | 55.0% |
| AAACAAGTCCCACCAGCCCA+GGG | + | chr1_3:60802872-60802891 | None:intergenic | 55.0% | |
| TAAACAAGTCCCACCAGCCC+AGG | + | chr1_3:60802873-60802892 | None:intergenic | 55.0% | |
| GTGCAAGAGCAACGCTGACA+TGG | + | chr1_3:60803269-60803288 | None:intergenic | 55.0% | |
| CAACCTAGCAACCTGCCAAG+AGG | + | chr1_3:60803680-60803699 | None:intergenic | 55.0% | |
| CTCTTGGCAGGTTGCTAGGT+TGG | - | chr1_3:60803678-60803697 | Msa0130500:intron | 55.0% | |
| ! | TTGGCAGGTTGCTAGGTTGG+TGG | - | chr1_3:60803681-60803700 | Msa0130500:intron | 55.0% |
| !! | GCCTAGAGGGGAACTTGTTG+AGG | - | chr1_3:60803938-60803957 | Msa0130500:intron | 55.0% |
| GAACGTGATGCTTGCAGGGA+AGG | + | chr1_3:60804511-60804530 | None:intergenic | 55.0% | |
| !! | AAGAAGTGCCCTATCTGCCG+TGG | - | chr1_3:60804674-60804693 | Msa0130500:intron | 55.0% |
| !! | AGAAGTGCCCTATCTGCCGT+GGG | - | chr1_3:60804675-60804694 | Msa0130500:intron | 55.0% |
| CGATTGTCCCACGGCAGATA+GGG | + | chr1_3:60804685-60804704 | None:intergenic | 55.0% | |
| TCGATTGTCCCACGGCAGAT+AGG | + | chr1_3:60804686-60804705 | None:intergenic | 55.0% | |
| GCCGTGGGACAATCGAAGAA+CGG | - | chr1_3:60804690-60804709 | Msa0130500:intron | 55.0% | |
| GCACCCGACGCATAAGCCAA+AGG | - | chr1_3:60799281-60799300 | Msa0130500:intron | 60.0% | |
| CGGATACAGTGAGCAGCCCT+AGG | - | chr1_3:60799643-60799662 | Msa0130500:intron | 60.0% | |
| !! | AGGCATCGAAGGAGCAGGCA+AGG | + | chr1_3:60800092-60800111 | None:intergenic | 60.0% |
| !! | CCATGAGGCATCGAAGGAGC+AGG | + | chr1_3:60800097-60800116 | None:intergenic | 60.0% |
| CCTGCTCCTTCGATGCCTCA+TGG | - | chr1_3:60800094-60800113 | Msa0130500:CDS | 60.0% | |
| AGGGCAGCAACATCACCTGC+AGG | + | chr1_3:60802853-60802872 | None:intergenic | 60.0% | |
| TGCAGGTGATGTTGCTGCCC+TGG | - | chr1_3:60802852-60802871 | Msa0130500:intron | 60.0% | |
| GCAGGTGATGTTGCTGCCCT+GGG | - | chr1_3:60802853-60802872 | Msa0130500:intron | 60.0% | |
| CCTAGCAACCTGCCAAGAGG+AGG | + | chr1_3:60803677-60803696 | None:intergenic | 60.0% | |
| CCTCCTCTTGGCAGGTTGCT+AGG | - | chr1_3:60803674-60803693 | Msa0130500:intron | 60.0% | |
| CGTGATGCTTGCAGGGAAGG+AGG | + | chr1_3:60804508-60804527 | None:intergenic | 60.0% | |
| !! | TGGCGCCCATGAGGCATCGA+AGG | + | chr1_3:60800103-60800122 | None:intergenic | 65.0% |
| GTGATGTTGCTGCCCTGGGC+TGG | - | chr1_3:60802857-60802876 | Msa0130500:intron | 65.0% | |
| ! | ATGTTGCTGCCCTGGGCTGG+TGG | - | chr1_3:60802860-60802879 | Msa0130500:intron | 65.0% |
| !! | TGTTGCTGCCCTGGGCTGGT+GGG | - | chr1_3:60802861-60802880 | Msa0130500:intron | 65.0% |
| GGTGGCTGCACTCCTCCTCT+TGG | - | chr1_3:60803662-60803681 | Msa0130500:intron | 65.0% | |
| GCTGCACTCCTCCTCTTGGC+AGG | - | chr1_3:60803666-60803685 | Msa0130500:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 60798272 | 60805277 | 60798272 | ID=Msa0130500;Name=Msa0130500 |
| chr1_3 | mRNA | 60798272 | 60805277 | 60798272 | ID=Msa0130500-mRNA-1;Parent=Msa0130500;Name=Msa0130500-mRNA-1;_AED=0.15;_eAED=0.15;_QI=165|1|1|1|0.92|0.92|14|544|467 |
| chr1_3 | exon | 60798272 | 60798894 | 60798272 | ID=Msa0130500-mRNA-1:exon:20100;Parent=Msa0130500-mRNA-1 |
| chr1_3 | exon | 60799012 | 60799091 | 60799012 | ID=Msa0130500-mRNA-1:exon:20099;Parent=Msa0130500-mRNA-1 |
| chr1_3 | exon | 60799348 | 60799428 | 60799348 | ID=Msa0130500-mRNA-1:exon:20098;Parent=Msa0130500-mRNA-1 |
| chr1_3 | exon | 60799587 | 60799647 | 60799587 | ID=Msa0130500-mRNA-1:exon:20097;Parent=Msa0130500-mRNA-1 |
| chr1_3 | exon | 60799787 | 60799861 | 60799787 | ID=Msa0130500-mRNA-1:exon:20096;Parent=Msa0130500-mRNA-1 |
| chr1_3 | exon | 60799997 | 60800202 | 60799997 | ID=Msa0130500-mRNA-1:exon:20095;Parent=Msa0130500-mRNA-1 |
| chr1_3 | exon | 60800303 | 60800555 | 60800303 | ID=Msa0130500-mRNA-1:exon:20094;Parent=Msa0130500-mRNA-1 |
| chr1_3 | exon | 60800647 | 60800692 | 60800647 | ID=Msa0130500-mRNA-1:exon:20093;Parent=Msa0130500-mRNA-1 |
| chr1_3 | exon | 60801360 | 60801429 | 60801360 | ID=Msa0130500-mRNA-1:exon:20092;Parent=Msa0130500-mRNA-1 |
| chr1_3 | exon | 60802223 | 60802292 | 60802223 | ID=Msa0130500-mRNA-1:exon:20091;Parent=Msa0130500-mRNA-1 |
| chr1_3 | exon | 60803052 | 60803121 | 60803052 | ID=Msa0130500-mRNA-1:exon:20090;Parent=Msa0130500-mRNA-1 |
| chr1_3 | exon | 60803241 | 60803325 | 60803241 | ID=Msa0130500-mRNA-1:exon:20089;Parent=Msa0130500-mRNA-1 |
| chr1_3 | exon | 60803426 | 60803516 | 60803426 | ID=Msa0130500-mRNA-1:exon:20088;Parent=Msa0130500-mRNA-1 |
| chr1_3 | exon | 60804976 | 60805277 | 60804976 | ID=Msa0130500-mRNA-1:exon:20087;Parent=Msa0130500-mRNA-1 |
| chr1_3 | five_prime_UTR | 60805113 | 60805277 | 60805113 | ID=Msa0130500-mRNA-1:five_prime_utr;Parent=Msa0130500-mRNA-1 |
| chr1_3 | CDS | 60804976 | 60805112 | 60804976 | ID=Msa0130500-mRNA-1:cds;Parent=Msa0130500-mRNA-1 |
| chr1_3 | CDS | 60803426 | 60803516 | 60803426 | ID=Msa0130500-mRNA-1:cds;Parent=Msa0130500-mRNA-1 |
| chr1_3 | CDS | 60803241 | 60803325 | 60803241 | ID=Msa0130500-mRNA-1:cds;Parent=Msa0130500-mRNA-1 |
| chr1_3 | CDS | 60803052 | 60803121 | 60803052 | ID=Msa0130500-mRNA-1:cds;Parent=Msa0130500-mRNA-1 |
| chr1_3 | CDS | 60802223 | 60802292 | 60802223 | ID=Msa0130500-mRNA-1:cds;Parent=Msa0130500-mRNA-1 |
| chr1_3 | CDS | 60801360 | 60801429 | 60801360 | ID=Msa0130500-mRNA-1:cds;Parent=Msa0130500-mRNA-1 |
| chr1_3 | CDS | 60800647 | 60800692 | 60800647 | ID=Msa0130500-mRNA-1:cds;Parent=Msa0130500-mRNA-1 |
| chr1_3 | CDS | 60800303 | 60800555 | 60800303 | ID=Msa0130500-mRNA-1:cds;Parent=Msa0130500-mRNA-1 |
| chr1_3 | CDS | 60799997 | 60800202 | 60799997 | ID=Msa0130500-mRNA-1:cds;Parent=Msa0130500-mRNA-1 |
| chr1_3 | CDS | 60799787 | 60799861 | 60799787 | ID=Msa0130500-mRNA-1:cds;Parent=Msa0130500-mRNA-1 |
| chr1_3 | CDS | 60799587 | 60799647 | 60799587 | ID=Msa0130500-mRNA-1:cds;Parent=Msa0130500-mRNA-1 |
| chr1_3 | CDS | 60799348 | 60799428 | 60799348 | ID=Msa0130500-mRNA-1:cds;Parent=Msa0130500-mRNA-1 |
| chr1_3 | CDS | 60799012 | 60799091 | 60799012 | ID=Msa0130500-mRNA-1:cds;Parent=Msa0130500-mRNA-1 |
| chr1_3 | CDS | 60798816 | 60798894 | 60798816 | ID=Msa0130500-mRNA-1:cds;Parent=Msa0130500-mRNA-1 |
| chr1_3 | three_prime_UTR | 60798272 | 60798815 | 60798272 | ID=Msa0130500-mRNA-1:three_prime_utr;Parent=Msa0130500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
