AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1075090


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1075090 MtrunA17_Chr7g0258321 92.979 470 6 5 1 449 1 464 0.0 882
Msa1075090 MtrunA17_Chr1g0174701 70.655 443 88 8 48 449 66 507 0.0 603
Msa1075090 MtrunA17_Chr7g0256211 60.811 296 99 5 162 448 165 452 1.24e-123 367
Msa1075090 MtrunA17_Chr8g0353501 60.678 295 99 5 162 447 179 465 1.28e-122 365
Msa1075090 MtrunA17_Chr2g0321431 55.593 295 112 3 159 448 189 469 6.78e-113 341
Msa1075090 MtrunA17_Chr4g0026401 53.821 301 117 4 153 448 178 461 3.43e-106 323
Msa1075090 MtrunA17_Chr5g0422771 51.325 302 132 4 155 448 170 464 1.08e-101 311
Msa1075090 MtrunA17_Chr1g0210151 49.180 305 147 3 149 448 39 340 8.12e-99 299
Msa1075090 MtrunA17_Chr3g0124601 51.877 293 129 3 161 448 76 361 3.24e-98 298
Msa1075090 MtrunA17_Chr5g0424861 43.529 340 171 6 112 445 23 347 1.05e-83 261
Msa1075090 MtrunA17_Chr8g0382861 46.897 290 141 4 164 448 75 356 1.36e-82 258
Msa1075090 MtrunA17_Chr3g0115371 44.377 329 167 5 129 446 24 347 1.74e-81 255
Msa1075090 MtrunA17_Chr5g0424851 42.920 226 119 3 226 445 1 222 4.92e-53 184
Msa1075090 MtrunA17_Chr5g0424851 42.056 214 115 2 228 436 217 426 2.04e-50 177
Msa1075090 MtrunA17_Chr3g0093451 46.154 182 84 5 149 318 30 209 5.16e-50 169
Msa1075090 MtrunA17_Chr1g0196951 31.156 199 115 6 248 441 59 240 3.68e-19 86.7
Msa1075090 MtrunA17_Chr7g0242651 25.112 223 138 5 236 438 6 219 2.38e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1075090 AT5G06839.1 60.584 411 121 11 64 449 22 416 1.19e-164 470
Msa1075090 AT5G06839.3 58.145 442 125 13 64 449 22 459 1.80e-164 471
Msa1075090 AT5G06839.2 60.194 412 122 11 64 449 22 417 8.14e-164 468
Msa1075090 AT1G08320.2 53.433 335 136 6 119 448 10 329 1.10e-119 353
Msa1075090 AT1G08320.5 53.433 335 136 6 119 448 10 329 1.10e-119 353
Msa1075090 AT1G08320.1 53.433 335 136 6 119 448 134 453 8.80e-118 353
Msa1075090 AT1G08320.4 53.433 335 136 6 119 448 134 453 8.80e-118 353
Msa1075090 AT1G08320.3 53.433 335 136 6 119 448 134 453 8.80e-118 353
Msa1075090 AT5G06950.2 54.762 294 119 3 162 448 44 330 2.35e-110 329
Msa1075090 AT5G06950.4 54.762 294 119 3 162 448 44 330 2.35e-110 329
Msa1075090 AT5G06950.1 54.762 294 119 3 162 448 44 330 2.35e-110 329
Msa1075090 AT5G06950.5 54.762 294 119 3 162 448 44 330 2.35e-110 329
Msa1075090 AT5G06950.3 54.762 294 119 3 162 448 44 330 2.35e-110 329
Msa1075090 AT3G12250.6 51.899 316 135 4 143 448 22 330 1.12e-109 327
Msa1075090 AT3G12250.2 51.899 316 135 4 143 448 22 330 1.12e-109 327
Msa1075090 AT3G12250.7 51.899 316 135 4 143 448 22 330 1.12e-109 327
Msa1075090 AT3G12250.1 51.899 316 135 4 143 448 22 330 1.12e-109 327
Msa1075090 AT3G12250.5 54.082 294 121 3 162 448 17 303 1.12e-108 323
Msa1075090 AT3G12250.3 54.082 294 121 3 162 448 38 324 4.73e-108 323
Msa1075090 AT3G12250.4 54.422 294 120 4 162 448 69 355 2.26e-107 322
Msa1075090 AT5G06960.2 54.762 294 119 4 162 448 44 330 2.83e-105 316
Msa1075090 AT5G06960.1 54.762 294 119 4 162 448 44 330 2.83e-105 316
Msa1075090 AT5G06960.3 54.422 294 120 3 162 448 24 310 2.95e-105 315
Msa1075090 AT1G68640.1 53.716 296 125 4 159 447 161 451 2.83e-100 307
Msa1075090 AT5G10030.5 50.512 293 132 4 161 448 78 362 1.73e-95 292
Msa1075090 AT5G10030.3 50.512 293 132 4 161 448 78 362 1.73e-95 292
Msa1075090 AT5G10030.1 50.512 293 132 4 161 448 78 362 1.73e-95 292
Msa1075090 AT5G10030.4 50.512 293 132 4 161 448 78 362 1.73e-95 292
Msa1075090 AT5G10030.2 50.512 293 132 4 161 448 78 362 1.73e-95 292
Msa1075090 AT1G77920.1 43.250 400 188 9 54 448 1 366 2.23e-94 289
Msa1075090 AT1G22070.1 52.542 295 124 5 162 448 96 382 8.05e-94 288
Msa1075090 AT5G65210.6 49.488 293 135 4 161 448 12 296 1.59e-92 282
Msa1075090 AT5G65210.5 49.488 293 135 4 161 448 82 366 5.54e-92 283
Msa1075090 AT5G65210.7 49.488 293 135 4 161 448 82 366 5.54e-92 283
Msa1075090 AT5G65210.3 49.488 293 135 4 161 448 82 366 5.54e-92 283
Msa1075090 AT5G65210.1 49.488 293 135 4 161 448 82 366 5.54e-92 283
Msa1075090 AT5G65210.2 49.488 293 135 4 161 448 82 366 5.54e-92 283
Msa1075090 AT5G65210.4 49.488 293 135 4 161 448 82 366 5.54e-92 283
Msa1075090 AT1G58330.1 25.974 231 137 5 232 438 3 223 1.30e-14 73.6

Find 100 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATATTTCATCTTGTTTC+TGG 0.146768 7_2:-73194995 Msa1075090:CDS
GTCCATTAAGATAGAGAAAA+AGG 0.218834 7_2:+73197337 None:intergenic
GATCATAATCAAATTTCTTT+TGG 0.221378 7_2:-73197578 Msa1075090:CDS
TAAACCTTCTGAACTCATTA+AGG 0.258020 7_2:-73194924 Msa1075090:intron
CAACAAATAATGGGCATATA+TGG 0.268804 7_2:-73194021 Msa1075090:CDS
AATGTTTGTGGACAAATTCT+TGG 0.284617 7_2:-73195065 Msa1075090:CDS
GTCCATGTAGTTGGTCATAT+TGG 0.290454 7_2:+73193891 None:intergenic
AGCTTATGATTTGGGTGAAT+TGG 0.294739 7_2:-73197367 Msa1075090:CDS
ATTGACCGAGCAACAAATAA+TGG 0.298535 7_2:-73194031 Msa1075090:CDS
GATTCGGGAGCTTATGATTT+GGG 0.302566 7_2:-73197375 Msa1075090:CDS
TGTACGTGCCTTAACAGCTT+TGG 0.332582 7_2:+73196459 None:intergenic
CACATGAAGCAACGTTCAAT+TGG 0.341843 7_2:+73194959 None:intergenic
TCCATGTAGTTGGTCATATT+GGG 0.346409 7_2:+73193892 None:intergenic
TATTAATTACACCTTAGAAT+TGG 0.350406 7_2:+73196628 None:intergenic
GTACGTGCCTTAACAGCTTT+GGG 0.362416 7_2:+73196460 None:intergenic
TGTTCATGGCCCTTGCCATT+TGG 0.365190 7_2:+73193869 None:intergenic
GCCATCATCGTCCAATTCTA+AGG 0.366357 7_2:-73196639 Msa1075090:intron
GGGTGGCTCTGATCCTCTCT+TGG 0.372781 7_2:+73196480 None:intergenic
TGCCATTTGGTCCATGTAGT+TGG 0.373834 7_2:+73193882 None:intergenic
TCTTCATCACCCTCTGTCCT+TGG 0.376928 7_2:-73197542 Msa1075090:CDS
TTCATCTTGTTTCTGGCATG+TGG 0.389553 7_2:-73194988 Msa1075090:CDS
TTTGGTGGAGGTGCAATGTT+GGG 0.390194 7_2:-73195315 Msa1075090:CDS
AGATTCGGGAGCTTATGATT+TGG 0.391428 7_2:-73197376 Msa1075090:CDS
AAGAGTGGAGAGTTTGTTCA+TGG 0.395292 7_2:+73193855 None:intergenic
AGTTGAGTAGTGGTTTGGTT+TGG 0.401033 7_2:+73197689 None:intergenic
GTTCTAGTTGAGTAGTGGTT+TGG 0.401946 7_2:+73197684 None:intergenic
ACATGAAGCAACGTTCAATT+GGG 0.406516 7_2:+73194960 None:intergenic
ATTATTTGTTGCTCGGTCAA+TGG 0.410343 7_2:+73194033 None:intergenic
GTCAGCAGAAATAAAGATTC+GGG 0.416098 7_2:-73197390 Msa1075090:intron
CTCTTGGATCCACTTGTTTG+CGG 0.419959 7_2:+73196496 None:intergenic
ATTTGATTATGATCATGTAT+TGG 0.421851 7_2:+73197587 None:intergenic
AGAGCCACCCAAAGCTGTTA+AGG 0.425349 7_2:-73196467 Msa1075090:CDS
AGAGATCACACCTGAGCTAA+TGG 0.429073 7_2:+73195263 None:intergenic
GAGCTAATGGTATTCATAGA+AGG 0.438872 7_2:+73195276 None:intergenic
TGTCAGCAGAAATAAAGATT+CGG 0.439709 7_2:-73197391 Msa1075090:intron
TATGCCCATTATTTGTTGCT+CGG 0.446315 7_2:+73194026 None:intergenic
CTTTGGTGGAGGTGCAATGT+TGG 0.447414 7_2:-73195316 Msa1075090:CDS
GACCAACTACATGGACCAAA+TGG 0.454379 7_2:-73193884 Msa1075090:CDS
TGATGACGGTGTTGAGGTGG+TGG 0.456563 7_2:+73197656 None:intergenic
TTGACCGAGCAACAAATAAT+GGG 0.460762 7_2:-73194030 Msa1075090:CDS
TAGGGCATGTTCTTTGGTGG+AGG 0.462298 7_2:-73195327 Msa1075090:CDS
GATCTGATTCAGACGATGAA+TGG 0.463347 7_2:+73191407 None:intergenic
AAAGAGTTAACCTTAGGATC+TGG 0.468362 7_2:+73195851 None:intergenic
TCCACAGAAAATTCAACATC+AGG 0.468688 7_2:-73196713 Msa1075090:intron
TAAACTTAATCAGATGGAAC+AGG 0.470502 7_2:-73195454 Msa1075090:CDS
CTCTTAGTTCACATACTAAA+CGG 0.475671 7_2:+73195125 None:intergenic
CGTTGCTTCATGTGGATTGG+TGG 0.475727 7_2:-73194950 Msa1075090:CDS
GAATGAGCTTAGAATGTTTG+TGG 0.479362 7_2:-73195077 Msa1075090:CDS
CGGTGTTGAGGTGGTGGGAG+TGG 0.482044 7_2:+73197662 None:intergenic
ACCTTAGAATTGGACGATGA+TGG 0.485367 7_2:+73196638 None:intergenic
AACATTCTAAGCTCATTCTC+AGG 0.491670 7_2:+73195082 None:intergenic
ACCTAAAACACCAGATCCTA+AGG 0.513193 7_2:-73195861 Msa1075090:intron
CAATTGAACGTTGCTTCATG+TGG 0.518218 7_2:-73194958 Msa1075090:CDS
TCATCTTGTTTCTGGCATGT+GGG 0.519428 7_2:-73194987 Msa1075090:CDS
CAGAATTAAACTTAATCAGA+TGG 0.528140 7_2:-73195460 Msa1075090:CDS
GAACGTTGCTTCATGTGGAT+TGG 0.530260 7_2:-73194953 Msa1075090:CDS
GAGTGGTTCTAGTTGAGTAG+TGG 0.532015 7_2:+73197679 None:intergenic
GATTCAGACGATGAATGGTT+TGG 0.540713 7_2:+73191412 None:intergenic
TTTGGTCTTGAACACTGGAT+GGG 0.540777 7_2:+73197307 None:intergenic
GCTACCTTAATGAGTTCAGA+AGG 0.549582 7_2:+73194920 None:intergenic
TCCCAATATGACCAACTACA+TGG 0.555270 7_2:-73193893 Msa1075090:CDS
GGAGAAGATGCTCTCTCTCA+AGG 0.558918 7_2:-73193976 Msa1075090:CDS
GAACTCACATGTAGCTTCCA+AGG 0.560164 7_2:+73197525 None:intergenic
TGCTCTCTCTCAAGGACTTG+AGG 0.560629 7_2:-73193968 Msa1075090:CDS
AAAATTCAACATCAGGAATG+AGG 0.564641 7_2:-73196706 Msa1075090:CDS
AACTCAATGCTCGCATACGA+TGG 0.565611 7_2:+73191334 None:intergenic
TCTACATGCATAGGCTGAGA+AGG 0.566999 7_2:+73196662 None:intergenic
TCTATGAATACCATTAGCTC+AGG 0.570910 7_2:-73195273 Msa1075090:intron
TCTTGAAAGTTTCGTGAGAG+AGG 0.574448 7_2:-73193836 Msa1075090:intron
GCAATGTTGGGAGGAGAACA+AGG 0.577141 7_2:-73195303 Msa1075090:CDS
GGAATATGCGAGGTGGCTTG+AGG 0.581832 7_2:-73195155 Msa1075090:CDS
TTAGTTTCTCCGCAAACAAG+TGG 0.585262 7_2:-73196505 Msa1075090:CDS
GATGATGAATTTGATGATGA+CGG 0.596752 7_2:+73197642 None:intergenic
GATGATGGCTCTACATGCAT+AGG 0.601506 7_2:+73196653 None:intergenic
TGATGATGACGGTGTTGAGG+TGG 0.603280 7_2:+73197653 None:intergenic
GGTGGAGGTGCAATGTTGGG+AGG 0.609507 7_2:-73195312 Msa1075090:CDS
TCTCACGAAACTTTCAAGAG+TGG 0.621714 7_2:+73193840 None:intergenic
GCGAGCATTGAGTTCTCTGT+GGG 0.622812 7_2:-73191325 Msa1075090:CDS
ATGTAGCTTCCAAGGACAGA+GGG 0.624605 7_2:+73197533 None:intergenic
TAACGACGCGTCAAGCAGCA+AGG 0.625480 7_2:-73191383 Msa1075090:CDS
TAATGGTATTCATAGAAGGA+AGG 0.626256 7_2:+73195280 None:intergenic
GATGACGGTGTTGAGGTGGT+GGG 0.626282 7_2:+73197657 None:intergenic
ACTACATGGACCAAATGGCA+AGG 0.628760 7_2:-73193879 Msa1075090:CDS
ATTTGATGATGACGGTGTTG+AGG 0.632863 7_2:+73197650 None:intergenic
CATGAAGCAACGTTCAATTG+GGG 0.638346 7_2:+73194961 None:intergenic
ATGTAGTTGGTCATATTGGG+AGG 0.641383 7_2:+73193895 None:intergenic
CAAACAAGTGGATCCAAGAG+AGG 0.644811 7_2:-73196493 Msa1075090:CDS
CGTGCCTTAACAGCTTTGGG+TGG 0.648085 7_2:+73196463 None:intergenic
AGCATTGAGTTCTCTGTGGG+TGG 0.652494 7_2:-73191322 Msa1075090:CDS
ACGATGGAAGTACTCAGCCA+TGG 0.660105 7_2:+73191350 None:intergenic
TGCGAGCATTGAGTTCTCTG+TGG 0.661165 7_2:-73191326 Msa1075090:CDS
ACTGAATGCTATTCTTGACG+AGG 0.667157 7_2:+73191294 None:intergenic
CATGTAGCTTCCAAGGACAG+AGG 0.680217 7_2:+73197532 None:intergenic
CTACATGGACCAAATGGCAA+GGG 0.682858 7_2:-73193878 Msa1075090:CDS
TTGCAACAATCTACACAACA+AGG 0.684828 7_2:-73193997 Msa1075090:CDS
TGTTCGACGTGGAATATGCG+AGG 0.686245 7_2:-73195165 Msa1075090:CDS
AGAGGCTGCAATGTTCGACG+TGG 0.690011 7_2:-73195176 Msa1075090:CDS
CTGAATGCTATTCTTGACGA+GGG 0.692425 7_2:+73191295 None:intergenic
TCGACGTGGAATATGCGAGG+TGG 0.738111 7_2:-73195162 Msa1075090:CDS
TTAGTTCACATACTAAACGG+TGG 0.740777 7_2:+73195128 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATTAATTATTTTAT+AGG - chr7_2:73192473-73192492 Msa1075090:intron 0.0%
!! TAAACTATTAATTAACATAT+TGG + chr7_2:73192596-73192615 None:intergenic 10.0%
!! AAAAAGATGTATAATAAATA+GGG - chr7_2:73192911-73192930 Msa1075090:intron 10.0%
!!! TTACTTTTTTTTATTCTTTT+TGG - chr7_2:73193261-73193280 Msa1075090:intron 10.0%
!! ATTTCAAATATTTATATAAG+AGG + chr7_2:73193807-73193826 None:intergenic 10.0%
!!! TATATATTTTTTAAAGTGAT+TGG - chr7_2:73195722-73195741 Msa1075090:intron 10.0%
!!! TTCTTTCTTTTTTCTAAAAA+AGG - chr7_2:73191973-73191992 Msa1075090:intron 15.0%
!!! TCTTTCTTTTTTCTAAAAAA+GGG - chr7_2:73191974-73191993 Msa1075090:intron 15.0%
!! TCAAAAAAATAATAAGAGTT+TGG - chr7_2:73192656-73192675 Msa1075090:intron 15.0%
!! GAAAAAGATGTATAATAAAT+AGG - chr7_2:73192910-73192929 Msa1075090:intron 15.0%
!! AAAAGATGTATAATAAATAG+GGG - chr7_2:73192912-73192931 Msa1075090:intron 15.0%
!! AAAGAAATAATTAATGTAGT+TGG - chr7_2:73192944-73192963 Msa1075090:intron 15.0%
!!! TTTTTTACATTTTTTGTCAA+TGG - chr7_2:73193456-73193475 Msa1075090:intron 15.0%
!!! TTTATTGTTATTTCCATTTT+AGG - chr7_2:73193666-73193685 Msa1075090:intron 15.0%
!!! TTATTGTTATTTCCATTTTA+GGG - chr7_2:73193667-73193686 Msa1075090:intron 15.0%
!! ATTTCTTAATCAATGTTATA+AGG + chr7_2:73194508-73194527 None:intergenic 15.0%
!! CTTATTGTTAATGAAATTAT+GGG - chr7_2:73194600-73194619 Msa1075090:intron 15.0%
!!! ATTTTTTTTTAGATGACAAA+AGG + chr7_2:73195314-73195333 None:intergenic 15.0%
!!! TGTATATATTAGTGATTTTT+AGG - chr7_2:73195409-73195428 Msa1075090:intron 15.0%
!!! AATTTTCTTTGTGAAATTTA+TGG - chr7_2:73196258-73196277 Msa1075090:intron 15.0%
!!! AAAATTTTGTTTGTTAACTA+TGG - chr7_2:73196441-73196460 Msa1075090:intron 15.0%
!!! AAATTTTGTTTGTTAACTAT+GGG - chr7_2:73196442-73196461 Msa1075090:intron 15.0%
!! ATCATTATCATTAGTATATA+TGG + chr7_2:73196695-73196714 None:intergenic 15.0%
!! CAAGAATAATAAATAGTTAT+AGG + chr7_2:73197098-73197117 None:intergenic 15.0%
!!! TTTATTATTCTTGTTTTCAA+AGG - chr7_2:73197105-73197124 Msa1075090:intron 15.0%
!! GTTTAAAAAAAGAAAATAAC+CGG - chr7_2:73197533-73197552 Msa1075090:CDS 15.0%
!! ATTTGATTATGATCATGTAT+TGG + chr7_2:73191428-73191447 None:intergenic 20.0%
!!! GATCATAATCAAATTTCTTT+TGG - chr7_2:73191434-73191453 Msa1075090:intron 20.0%
!!! AAAAAAAAAACTCACGTTTT+TGG + chr7_2:73191726-73191745 None:intergenic 20.0%
!! AATGATAGAATGAATAAAGA+GGG + chr7_2:73192173-73192192 None:intergenic 20.0%
!! AAATGATAGAATGAATAAAG+AGG + chr7_2:73192174-73192193 None:intergenic 20.0%
!! TATTAATTACACCTTAGAAT+TGG + chr7_2:73192387-73192406 None:intergenic 20.0%
!! TTTGTTACACTTCATATTAA+TGG - chr7_2:73192449-73192468 Msa1075090:intron 20.0%
!! AAGAAACAATTATAAGAGTT+TGG - chr7_2:73192629-73192648 Msa1075090:intron 20.0%
!! ATAAAATGTGGATATGAAAT+GGG + chr7_2:73193233-73193252 None:intergenic 20.0%
!! TAAAAAACACAACACAAATA+TGG + chr7_2:73193443-73193462 None:intergenic 20.0%
!!! TTTTATTTGTACTCTTTTTC+AGG - chr7_2:73193504-73193523 Msa1075090:intron 20.0%
!! AAACAAGAAAAATATCTTCA+TGG - chr7_2:73193610-73193629 Msa1075090:intron 20.0%
!! TGATTAAACATGCATTATAA+GGG + chr7_2:73193778-73193797 None:intergenic 20.0%
!! TTGATTAAACATGCATTATA+AGG + chr7_2:73193779-73193798 None:intergenic 20.0%
!!! ATTTGAAATGAATATTTCAG+AGG - chr7_2:73193818-73193837 Msa1075090:intron 20.0%
!! TGTTAAATAATGTTAAGTCA+TGG + chr7_2:73194159-73194178 None:intergenic 20.0%
!!! ATAATTTTTATGCGAAGAAT+AGG - chr7_2:73194263-73194282 Msa1075090:intron 20.0%
!!! TAATTTTTATGCGAAGAATA+GGG - chr7_2:73194264-73194283 Msa1075090:intron 20.0%
!! ATTCATAAACTTTGTATTGT+CGG - chr7_2:73194341-73194360 Msa1075090:intron 20.0%
!! TTAATCAATGTTATAAGGTA+TGG + chr7_2:73194503-73194522 None:intergenic 20.0%
!! CCATAATTTCATTAACAATA+AGG + chr7_2:73194602-73194621 None:intergenic 20.0%
!! CCTTATTGTTAATGAAATTA+TGG - chr7_2:73194599-73194618 Msa1075090:intron 20.0%
!! TTCAATACTAATACTATAAG+CGG + chr7_2:73194743-73194762 None:intergenic 20.0%
!! TTGTTGAATTCAATGTTATA+AGG - chr7_2:73194827-73194846 Msa1075090:intron 20.0%
!! AGAAACATAAAAATCACATT+TGG + chr7_2:73194920-73194939 None:intergenic 20.0%
!! AAATAATAGTATTTGCGAAT+AGG - chr7_2:73195242-73195261 Msa1075090:intron 20.0%
!! CATATAGATATTGTTAATCA+TGG - chr7_2:73195365-73195384 Msa1075090:intron 20.0%
!!! TATATTAGTGATTTTTAGGA+TGG - chr7_2:73195413-73195432 Msa1075090:intron 20.0%
!! AAATTCAAAAAGGATGTTAT+GGG + chr7_2:73196040-73196059 None:intergenic 20.0%
!! AAAATTCAAAAAGGATGTTA+TGG + chr7_2:73196041-73196060 None:intergenic 20.0%
!!! CTTTTAGTCAAAATTCAAAA+AGG + chr7_2:73196050-73196069 None:intergenic 20.0%
!!! ATTTTGACTAAAAGTACAAA+CGG - chr7_2:73196056-73196075 Msa1075090:intron 20.0%
!! TAGAAGAAAACAAAATGATA+TGG + chr7_2:73196162-73196181 None:intergenic 20.0%
!!! ATATCATTTTGTTTTCTTCT+AGG - chr7_2:73196161-73196180 Msa1075090:intron 20.0%
!! AAAAAAATCACACTATATTG+TGG + chr7_2:73196304-73196323 None:intergenic 20.0%
!!! AATTTTGTATATTTGCTTGT+GGG + chr7_2:73196427-73196446 None:intergenic 20.0%
!!! AAATTTTGTATATTTGCTTG+TGG + chr7_2:73196428-73196447 None:intergenic 20.0%
!! TTCATTAACAATTCTTGAAA+TGG - chr7_2:73196470-73196489 Msa1075090:CDS 20.0%
!! CAAATTAACACATATGATAT+TGG + chr7_2:73196510-73196529 None:intergenic 20.0%
!! TAGATTCAAAGATGTATAAT+TGG + chr7_2:73196612-73196631 None:intergenic 20.0%
!! GTTATAGATAACCAAAATTT+CGG - chr7_2:73197032-73197051 Msa1075090:intron 20.0%
!!! TATTTTTTTAGACGATTCAA+CGG - chr7_2:73197479-73197498 Msa1075090:intron 20.0%
! TGTCTTACGTTAAGAAAAAT+TGG - chr7_2:73191563-73191582 Msa1075090:intron 25.0%
! TCCATTAAGATAGAGAAAAA+GGG + chr7_2:73191677-73191696 None:intergenic 25.0%
! ATTTCAAGCAAAACGTTATT+GGG + chr7_2:73191760-73191779 None:intergenic 25.0%
! AATTTCAAGCAAAACGTTAT+TGG + chr7_2:73191761-73191780 None:intergenic 25.0%
! TTGCTTGAAATTCAAAAAGA+AGG - chr7_2:73191769-73191788 Msa1075090:intron 25.0%
! TATAACAAACCAAAAGTGAA+AGG + chr7_2:73191803-73191822 None:intergenic 25.0%
! AAATATTTACAAGAGAAGAG+AGG - chr7_2:73192067-73192086 Msa1075090:intron 25.0%
! CTATTTAATGTTGCTGAATT+TGG - chr7_2:73192262-73192281 Msa1075090:intron 25.0%
!!! AATTATTTTATAGGCTAGCA+TGG - chr7_2:73192482-73192501 Msa1075090:intron 25.0%
!!! TTCCCGTTATTTTTTCAAAA+GGG + chr7_2:73192773-73192792 None:intergenic 25.0%
!!! ATTCCCGTTATTTTTTCAAA+AGG + chr7_2:73192774-73192793 None:intergenic 25.0%
!!! AATTTTATCCTTTAAGAGAG+AGG - chr7_2:73192846-73192865 Msa1075090:intron 25.0%
!!! ATTTTATCCTTTAAGAGAGA+GGG - chr7_2:73192847-73192866 Msa1075090:intron 25.0%
! GACAAGAAAAATTCTCAAAA+GGG - chr7_2:73192994-73193013 Msa1075090:intron 25.0%
!! TCAAAAGGGTCTTATAATTA+GGG - chr7_2:73193008-73193027 Msa1075090:intron 25.0%
! AAGATTAAAGAGTTAACCTT+AGG + chr7_2:73193170-73193189 None:intergenic 25.0%
! TAAAATGTGGATATGAAATG+GGG + chr7_2:73193232-73193251 None:intergenic 25.0%
! GATAAAATGTGGATATGAAA+TGG + chr7_2:73193234-73193253 None:intergenic 25.0%
! GTAACAAGATTGATAAAATG+TGG + chr7_2:73193245-73193264 None:intergenic 25.0%
! CAGAATTAAACTTAATCAGA+TGG - chr7_2:73193552-73193571 Msa1075090:intron 25.0%
!! GATATATTTCATCTTGTTTC+TGG - chr7_2:73194017-73194036 Msa1075090:CDS 25.0%
! TTGCAATATTAGTTGAACTT+TGG - chr7_2:73194229-73194248 Msa1075090:intron 25.0%
! TAACGTTATAGTCATTCAAA+AGG - chr7_2:73194299-73194318 Msa1075090:intron 25.0%
!!! GCTCTTCTTTTTTATTTCTT+TGG + chr7_2:73194379-73194398 None:intergenic 25.0%
!! TGAAGATTTTCCATATTGTA+CGG - chr7_2:73194450-73194469 Msa1075090:intron 25.0%
! TCAATACTAATACTATAAGC+GGG + chr7_2:73194742-73194761 None:intergenic 25.0%
! AACTAACTTAAAGAGATAGA+TGG + chr7_2:73195617-73195636 None:intergenic 25.0%
!! ATCTCTTTAAGTTAGTTACA+TGG - chr7_2:73195620-73195639 Msa1075090:intron 25.0%
! TTCACATTGATGAATTTCTA+AGG - chr7_2:73195854-73195873 Msa1075090:intron 25.0%
! TTAATTAGGATTGTATCAGT+GGG + chr7_2:73195934-73195953 None:intergenic 25.0%
! TTTAATTAGGATTGTATCAG+TGG + chr7_2:73195935-73195954 None:intergenic 25.0%
!!! AGGGATAGTATCTTTTAATT+AGG + chr7_2:73195948-73195967 None:intergenic 25.0%
! AATTCAAAAAGGATGTTATG+GGG + chr7_2:73196039-73196058 None:intergenic 25.0%
!! CTCATGTCTAATATGATTTT+TGG - chr7_2:73196092-73196111 Msa1075090:intron 25.0%
!! GCAAGATTTTTGAATCAAAT+TGG - chr7_2:73196136-73196155 Msa1075090:intron 25.0%
!!! ATCAAAATATCGACTGATTT+TGG - chr7_2:73196185-73196204 Msa1075090:intron 25.0%
!!! TTGAATTAAGTTGAAAGCAA+TGG - chr7_2:73196224-73196243 Msa1075090:intron 25.0%
! ATATAGACATTGATAGAAGT+CGG + chr7_2:73196561-73196580 None:intergenic 25.0%
! ATCAATGTCTATATTAGTAG+CGG - chr7_2:73196567-73196586 Msa1075090:intron 25.0%
! AAGCTAGAGGAATATTAATT+AGG - chr7_2:73196665-73196684 Msa1075090:CDS 25.0%
!! TAGGTTTTCTTAGTCAAATT+TGG + chr7_2:73197066-73197085 None:intergenic 25.0%
! TAGTTATAGGAACATGATAT+AGG + chr7_2:73197085-73197104 None:intergenic 25.0%
! TTAGTATGAACAGTATTATC+TGG + chr7_2:73197505-73197524 None:intergenic 25.0%
! TCAATTCAAATCACAATTAC+CGG + chr7_2:73197555-73197574 None:intergenic 25.0%
!! GATGATGAATTTGATGATGA+CGG + chr7_2:73191373-73191392 None:intergenic 30.0%
TGTCAGCAGAAATAAAGATT+CGG - chr7_2:73191621-73191640 Msa1075090:intron 30.0%
GTCCATTAAGATAGAGAAAA+AGG + chr7_2:73191678-73191697 None:intergenic 30.0%
! AACCAAAAGTGTGGAAAAAA+TGG - chr7_2:73191922-73191941 Msa1075090:intron 30.0%
!!! TTCCATTTTTTCCACACTTT+TGG + chr7_2:73191927-73191946 None:intergenic 30.0%
!! AAAGAGGGTCTATTTTTCAA+AGG + chr7_2:73192158-73192177 None:intergenic 30.0%
AAAATTCAACATCAGGAATG+AGG - chr7_2:73192306-73192325 Msa1075090:intron 30.0%
TCAAAAGGGTCCTATAATTA+GGG + chr7_2:73192759-73192778 None:intergenic 30.0%
TTCAAAAGGGTCCTATAATT+AGG + chr7_2:73192760-73192779 None:intergenic 30.0%
!! GGACCCTTTTGAAAAAATAA+CGG - chr7_2:73192767-73192786 Msa1075090:intron 30.0%
!! GACCCTTTTGAAAAAATAAC+GGG - chr7_2:73192768-73192787 Msa1075090:intron 30.0%
! AATAACGGGAATTAAGATAG+TGG - chr7_2:73192782-73192801 Msa1075090:intron 30.0%
AATGTAGTTGGAAATAGCAA+AGG - chr7_2:73192956-73192975 Msa1075090:intron 30.0%
ATGTAGTTGGAAATAGCAAA+GGG - chr7_2:73192957-73192976 Msa1075090:intron 30.0%
GGACAAGAAAAATTCTCAAA+AGG - chr7_2:73192993-73193012 Msa1075090:intron 30.0%
! CTCAAAAGGGTCTTATAATT+AGG - chr7_2:73193007-73193026 Msa1075090:intron 30.0%
CTATAGTATAGTAAACGCAT+AGG + chr7_2:73193078-73193097 None:intergenic 30.0%
TAAACTTAATCAGATGGAAC+AGG - chr7_2:73193558-73193577 Msa1075090:intron 30.0%
GTAACCTAAAATGCAATAAC+TGG - chr7_2:73193632-73193651 Msa1075090:intron 30.0%
! ATGTCCAGTTATTGCATTTT+AGG + chr7_2:73193639-73193658 None:intergenic 30.0%
TAATGGTATTCATAGAAGGA+AGG + chr7_2:73193735-73193754 None:intergenic 30.0%
CTCTTAGTTCACATACTAAA+CGG + chr7_2:73193890-73193909 None:intergenic 30.0%
AATGTTTGTGGACAAATTCT+TGG - chr7_2:73193947-73193966 Msa1075090:CDS 30.0%
TAAACCTTCTGAACTCATTA+AGG - chr7_2:73194088-73194107 Msa1075090:intron 30.0%
ACACTATTCTAAGTAACCAA+AGG - chr7_2:73194118-73194137 Msa1075090:intron 30.0%
ATAAACTTTGTATTGTCGGT+GGG - chr7_2:73194345-73194364 Msa1075090:intron 30.0%
CTACAATAGAAAAGAGAGAT+GGG + chr7_2:73194647-73194666 None:intergenic 30.0%
ACTACAATAGAAAAGAGAGA+TGG + chr7_2:73194648-73194667 None:intergenic 30.0%
GTTATAAGGAGAACTATAAG+TGG - chr7_2:73194841-73194860 Msa1075090:intron 30.0%
!! CAACAAATAATGGGCATATA+TGG - chr7_2:73194991-73195010 Msa1075090:CDS 30.0%
CATGTCAAATAGTCAAAGTA+AGG + chr7_2:73195209-73195228 None:intergenic 30.0%
TTAATCATGGACGTTGAATT+TGG - chr7_2:73195378-73195397 Msa1075090:intron 30.0%
!!! ATCATGGTTGATTAGTTTTG+TGG - chr7_2:73195458-73195477 Msa1075090:CDS 30.0%
ATGAAAACTTTGTCAAGTCA+TGG + chr7_2:73195498-73195517 None:intergenic 30.0%
!! AGTTTTCATAACTGATTTCG+TGG - chr7_2:73195509-73195528 Msa1075090:intron 30.0%
!! GTTTTCATAACTGATTTCGT+GGG - chr7_2:73195510-73195529 Msa1075090:intron 30.0%
!! TTTTCATAACTGATTTCGTG+GGG - chr7_2:73195511-73195530 Msa1075090:intron 30.0%
AACTTAAAGAGATAGATGGA+TGG + chr7_2:73195613-73195632 None:intergenic 30.0%
!! ATAGCAAAGGTACCATAATA+AGG - chr7_2:73195781-73195800 Msa1075090:intron 30.0%
ATAGCTAGGAAACCTTATTA+TGG + chr7_2:73195796-73195815 None:intergenic 30.0%
AATAAGGTTTCCTAGCTATA+AGG - chr7_2:73195797-73195816 Msa1075090:intron 30.0%
CACGTGAAAGTTAATATTAG+TGG - chr7_2:73195907-73195926 Msa1075090:intron 30.0%
AATTCTTGAAATGGTAACCT+AGG - chr7_2:73196479-73196498 Msa1075090:CDS 30.0%
TAACACATATGATATTGGTG+AGG + chr7_2:73196505-73196524 None:intergenic 30.0%
ATCTATTGTAAGTAACCGAT+CGG - chr7_2:73196627-73196646 Msa1075090:intron 30.0%
CAAGGACAAATACTACAAAT+TGG + chr7_2:73196775-73196794 None:intergenic 30.0%
TTTGTAGTATTTGTCCTTGT+TGG - chr7_2:73196776-73196795 Msa1075090:intron 30.0%
!! GATTTTTCAAAGTACGTAAG+GGG + chr7_2:73196973-73196992 None:intergenic 30.0%
!! CGATTTTTCAAAGTACGTAA+GGG + chr7_2:73196974-73196993 None:intergenic 30.0%
!! ACGATTTTTCAAAGTACGTA+AGG + chr7_2:73196975-73196994 None:intergenic 30.0%
!!! TCTTGTTTTCAAAGGTAGAA+AGG - chr7_2:73197113-73197132 Msa1075090:intron 30.0%
!! CTTGTTTTCAAAGGTAGAAA+GGG - chr7_2:73197114-73197133 Msa1075090:intron 30.0%
ACAATGTATATGTTTGTGTG+TGG + chr7_2:73197257-73197276 None:intergenic 30.0%
ATTATGTGTACTTATCCTCT+AGG - chr7_2:73197308-73197327 Msa1075090:CDS 30.0%
TTATGTGTACTTATCCTCTA+GGG - chr7_2:73197309-73197328 Msa1075090:CDS 30.0%
! TGAGTCAACTCTATATTTTG+CGG + chr7_2:73197439-73197458 None:intergenic 30.0%
GTGATTTGAATTGAACTTAC+AGG - chr7_2:73197561-73197580 Msa1075090:CDS 30.0%
!!! TTGGTTTGGTTTTTCAACAC+TGG + chr7_2:73191312-73191331 None:intergenic 35.0%
GTCAGCAGAAATAAAGATTC+GGG - chr7_2:73191622-73191641 Msa1075090:intron 35.0%
! AGCTTATGATTTGGGTGAAT+TGG - chr7_2:73191645-73191664 Msa1075090:intron 35.0%
! GCCCTTTTTCTCTATCTTAA+TGG - chr7_2:73191673-73191692 Msa1075090:intron 35.0%
AAACGTTATTGGGATTTGGA+AGG + chr7_2:73191750-73191769 None:intergenic 35.0%
AGCAAAACGTTATTGGGATT+TGG + chr7_2:73191754-73191773 None:intergenic 35.0%
! GACTCTTTTCCTTTCACTTT+TGG - chr7_2:73191791-73191810 Msa1075090:intron 35.0%
!! TGTTTTGCTTTTCTGCAGAA+AGG + chr7_2:73191902-73191921 None:intergenic 35.0%
AGCAAAACAAACCAAAAGTG+TGG - chr7_2:73191913-73191932 Msa1075090:intron 35.0%
TCCACAGAAAATTCAACATC+AGG - chr7_2:73192299-73192318 Msa1075090:intron 35.0%
! TCCTGATGTTGAATTTTCTG+TGG + chr7_2:73192303-73192322 None:intergenic 35.0%
GAAGGAAAAATGTTGAGAGT+TGG + chr7_2:73192335-73192354 None:intergenic 35.0%
TGTAGTTGGAAATAGCAAAG+GGG - chr7_2:73192958-73192977 Msa1075090:intron 35.0%
! AGCAAAGGGGTCTTATAAAA+AGG - chr7_2:73192971-73192990 Msa1075090:intron 35.0%
! GCAAAGGGGTCTTATAAAAA+GGG - chr7_2:73192972-73192991 Msa1075090:intron 35.0%
! AAGGGTCTTATAATTAGGGA+CGG - chr7_2:73193012-73193031 Msa1075090:intron 35.0%
GCATAGGTAGGTGATTAATT+AGG + chr7_2:73193062-73193081 None:intergenic 35.0%
AGTATAGTAAACGCATAGGT+AGG + chr7_2:73193074-73193093 None:intergenic 35.0%
TCATGTTCAGAACTTGAAGT+TGG + chr7_2:73193128-73193147 None:intergenic 35.0%
!! ACTTCAAGTTCTGAACATGA+AGG - chr7_2:73193128-73193147 Msa1075090:intron 35.0%
AAAGAGTTAACCTTAGGATC+TGG + chr7_2:73193164-73193183 None:intergenic 35.0%
AAAAAGCAGGCTTAGGAAAA+AGG - chr7_2:73193383-73193402 Msa1075090:intron 35.0%
AGGCTTAGGAAAAAGGTAAA+TGG - chr7_2:73193390-73193409 Msa1075090:intron 35.0%
GAGCTAATGGTATTCATAGA+AGG + chr7_2:73193739-73193758 None:intergenic 35.0%
TCTATGAATACCATTAGCTC+AGG - chr7_2:73193739-73193758 Msa1075090:intron 35.0%
TTAGTTCACATACTAAACGG+TGG + chr7_2:73193887-73193906 None:intergenic 35.0%
AACATTCTAAGCTCATTCTC+AGG + chr7_2:73193933-73193952 None:intergenic 35.0%
GAATGAGCTTAGAATGTTTG+TGG - chr7_2:73193935-73193954 Msa1075090:CDS 35.0%
ACATGAAGCAACGTTCAATT+GGG + chr7_2:73194055-73194074 None:intergenic 35.0%
! TTTTTATGCGAAGAATAGGG+AGG - chr7_2:73194267-73194286 Msa1075090:intron 35.0%
! TTTTATGCGAAGAATAGGGA+GGG - chr7_2:73194268-73194287 Msa1075090:intron 35.0%
CATAAACTTTGTATTGTCGG+TGG - chr7_2:73194344-73194363 Msa1075090:intron 35.0%
TAAACTTTGTATTGTCGGTG+GGG - chr7_2:73194346-73194365 Msa1075090:intron 35.0%
ATACTATAAGCGGGAAAGTA+TGG + chr7_2:73194733-73194752 None:intergenic 35.0%
! ATTATTTGTTGCTCGGTCAA+TGG + chr7_2:73194982-73195001 None:intergenic 35.0%
ATTGACCGAGCAACAAATAA+TGG - chr7_2:73194981-73195000 Msa1075090:CDS 35.0%
TTGACCGAGCAACAAATAAT+GGG - chr7_2:73194982-73195001 Msa1075090:CDS 35.0%
! TATGCCCATTATTTGTTGCT+CGG + chr7_2:73194989-73195008 None:intergenic 35.0%
TTGCAACAATCTACACAACA+AGG - chr7_2:73195015-73195034 Msa1075090:CDS 35.0%
TCCATGTAGTTGGTCATATT+GGG + chr7_2:73195123-73195142 None:intergenic 35.0%
! TTTCATAACTGATTTCGTGG+GGG - chr7_2:73195512-73195531 Msa1075090:intron 35.0%
AAGAAGAATCTGTTGTCCTT+GGG - chr7_2:73195549-73195568 Msa1075090:intron 35.0%
TAAAGAGATAGATGGATGGA+AGG + chr7_2:73195609-73195628 None:intergenic 35.0%
GAGAGTTAGTTAGTACACAT+AGG - chr7_2:73195748-73195767 Msa1075090:intron 35.0%
TTCCTAGCTATAAGGTTATG+AGG - chr7_2:73195805-73195824 Msa1075090:intron 35.0%
ATCCTCATAACCTTATAGCT+AGG + chr7_2:73195810-73195829 None:intergenic 35.0%
CATGACATCACATAGATATG+GGG + chr7_2:73195975-73195994 None:intergenic 35.0%
CCATGACATCACATAGATAT+GGG + chr7_2:73195976-73195995 None:intergenic 35.0%
ACCATGACATCACATAGATA+TGG + chr7_2:73195977-73195996 None:intergenic 35.0%
AAAAAGGATGTTATGGGGAA+GGG + chr7_2:73196034-73196053 None:intergenic 35.0%
CAAATTGGTCAAACTATGAC+TGG + chr7_2:73196760-73196779 None:intergenic 35.0%
CACTAGCACTTCAACATATA+AGG + chr7_2:73197013-73197032 None:intergenic 35.0%
! TGGAACGTTAACCGAAATTT+TGG + chr7_2:73197046-73197065 None:intergenic 35.0%
CAGTTGAATCTACAAGCAAA+AGG - chr7_2:73197212-73197231 Msa1075090:intron 35.0%
TTGAATCTACAAGCAAAAGG+TGG - chr7_2:73197215-73197234 Msa1075090:intron 35.0%
ATGTATATGTTTGTGTGTGG+AGG + chr7_2:73197254-73197273 None:intergenic 35.0%
!! ACCACAATTTGACTTGATCA+GGG + chr7_2:73197342-73197361 None:intergenic 35.0%
!! AACCACAATTTGACTTGATC+AGG + chr7_2:73197343-73197362 None:intergenic 35.0%
TGATCAAGTCAAATTGTGGT+TGG - chr7_2:73197342-73197361 Msa1075090:CDS 35.0%
TTATCGATCACTGTAGTGAT+AGG - chr7_2:73197384-73197403 Msa1075090:CDS 35.0%
!! AGTTGAGTAGTGGTTTGGTT+TGG + chr7_2:73191326-73191345 None:intergenic 40.0%
! GTTCTAGTTGAGTAGTGGTT+TGG + chr7_2:73191331-73191350 None:intergenic 40.0%
!! ATTTGATGATGACGGTGTTG+AGG + chr7_2:73191365-73191384 None:intergenic 40.0%
! GGATGATGATGATGATGTTG+TGG + chr7_2:73191407-73191426 None:intergenic 40.0%
AGATTCGGGAGCTTATGATT+TGG - chr7_2:73191636-73191655 Msa1075090:intron 40.0%
GATTCGGGAGCTTATGATTT+GGG - chr7_2:73191637-73191656 Msa1075090:intron 40.0%
!! TTTGGTCTTGAACACTGGAT+GGG + chr7_2:73191708-73191727 None:intergenic 40.0%
!!! TTTTGGTCTTGAACACTGGA+TGG + chr7_2:73191709-73191728 None:intergenic 40.0%
!!! ACGTTTTTGGTCTTGAACAC+TGG + chr7_2:73191713-73191732 None:intergenic 40.0%
GATTCTGCTGAACATGCTAT+TGG + chr7_2:73191846-73191865 None:intergenic 40.0%
GGAAAAATGTTGAGAGTTGG+TGG + chr7_2:73192332-73192351 None:intergenic 40.0%
ACCTTAGAATTGGACGATGA+TGG + chr7_2:73192377-73192396 None:intergenic 40.0%
TTAGTTTCTCCGCAAACAAG+TGG - chr7_2:73192507-73192526 Msa1075090:intron 40.0%
AAGGGTCCTATAATTAGGGA+CGG + chr7_2:73192755-73192774 None:intergenic 40.0%
! TATCCTTTAAGAGAGAGGGT+TGG - chr7_2:73192851-73192870 Msa1075090:intron 40.0%
AAACCAACCCTCTCTCTTAA+AGG + chr7_2:73192857-73192876 None:intergenic 40.0%
TAGCAGCGAGAGAAAAATCA+TGG - chr7_2:73193095-73193114 Msa1075090:intron 40.0%
CGAGAGAAAAATCATGGCAA+GGG - chr7_2:73193101-73193120 Msa1075090:intron 40.0%
ACCTAAAACACCAGATCCTA+AGG - chr7_2:73193151-73193170 Msa1075090:intron 40.0%
! ACCTTAGGATCTGGTGTTTT+AGG + chr7_2:73193155-73193174 None:intergenic 40.0%
CCAAAGAACATGCCCTAAAA+TGG + chr7_2:73193682-73193701 None:intergenic 40.0%
!!! CCATTTTAGGGCATGTTCTT+TGG - chr7_2:73193679-73193698 Msa1075090:intron 40.0%
!!! TTTTAGGGCATGTTCTTTGG+TGG - chr7_2:73193682-73193701 Msa1075090:intron 40.0%
!! TTCATCTTGTTTCTGGCATG+TGG - chr7_2:73194024-73194043 Msa1075090:CDS 40.0%
!! TCATCTTGTTTCTGGCATGT+GGG - chr7_2:73194025-73194044 Msa1075090:CDS 40.0%
CATGAAGCAACGTTCAATTG+GGG + chr7_2:73194054-73194073 None:intergenic 40.0%
CACATGAAGCAACGTTCAAT+TGG + chr7_2:73194056-73194075 None:intergenic 40.0%
CAATTGAACGTTGCTTCATG+TGG - chr7_2:73194054-73194073 Msa1075090:CDS 40.0%
GCTACCTTAATGAGTTCAGA+AGG + chr7_2:73194095-73194114 None:intergenic 40.0%
GCATGAATGACATGAACCTT+TGG + chr7_2:73194137-73194156 None:intergenic 40.0%
CCTAACTCTACCGTACAATA+TGG + chr7_2:73194463-73194482 None:intergenic 40.0%
CCATATTGTACGGTAGAGTT+AGG - chr7_2:73194460-73194479 Msa1075090:intron 40.0%
ATGTAGTTGGTCATATTGGG+AGG + chr7_2:73195120-73195139 None:intergenic 40.0%
TCCCAATATGACCAACTACA+TGG - chr7_2:73195119-73195138 Msa1075090:CDS 40.0%
GTCCATGTAGTTGGTCATAT+TGG + chr7_2:73195124-73195143 None:intergenic 40.0%
! AAGAGTGGAGAGTTTGTTCA+TGG + chr7_2:73195160-73195179 None:intergenic 40.0%
TCTCACGAAACTTTCAAGAG+TGG + chr7_2:73195175-73195194 None:intergenic 40.0%
TCTTGAAAGTTTCGTGAGAG+AGG - chr7_2:73195176-73195195 Msa1075090:CDS 40.0%
GCGACATGCTATCTATATCA+TGG - chr7_2:73195442-73195461 Msa1075090:CDS 40.0%
!! AGTTTTGTGGTCCCTCTATA+AGG - chr7_2:73195471-73195490 Msa1075090:CDS 40.0%
! GTTTTGTGGTCCCTCTATAA+GGG - chr7_2:73195472-73195491 Msa1075090:CDS 40.0%
GAAGAAGAATCTGTTGTCCT+TGG - chr7_2:73195548-73195567 Msa1075090:intron 40.0%
! AGGCGTAAAAAGCATAGCAA+AGG - chr7_2:73195768-73195787 Msa1075090:intron 40.0%
CCCATATCTATGTGATGTCA+TGG - chr7_2:73195973-73195992 Msa1075090:intron 40.0%
AGTGCTGTCTTCAAGTCAAA+CGG + chr7_2:73196005-73196024 None:intergenic 40.0%
CAAAAAGGATGTTATGGGGA+AGG + chr7_2:73196035-73196054 None:intergenic 40.0%
TCACACTATATTGTGGTAGC+TGG + chr7_2:73196297-73196316 None:intergenic 40.0%
ATATGATATTGGTGAGGCCT+AGG + chr7_2:73196499-73196518 None:intergenic 40.0%
! AGAAGTCGGTGAACAACTTT+TGG + chr7_2:73196547-73196566 None:intergenic 40.0%
TAAGTAACCGATCGGAACAA+TGG - chr7_2:73196635-73196654 Msa1075090:intron 40.0%
AAGTAACCGATCGGAACAAT+GGG - chr7_2:73196636-73196655 Msa1075090:intron 40.0%
TTGTTTCCCATTGTTCCGAT+CGG + chr7_2:73196645-73196664 None:intergenic 40.0%
CAATGGGAAACAAAAGCTAG+AGG - chr7_2:73196652-73196671 Msa1075090:CDS 40.0%
GTGTGACTAAAAGTCCAACA+AGG + chr7_2:73196793-73196812 None:intergenic 40.0%
TTGGAGACGAAACTGTAACA+AGG + chr7_2:73197149-73197168 None:intergenic 40.0%
AGACACAGACAAAAAGAGGT+TGG + chr7_2:73197168-73197187 None:intergenic 40.0%
GCAAAGACACAGACAAAAAG+AGG + chr7_2:73197172-73197191 None:intergenic 40.0%
!! CAATTTGACTTGATCAGGGA+TGG + chr7_2:73197338-73197357 None:intergenic 40.0%
TCCCTGATCAAGTCAAATTG+TGG - chr7_2:73197338-73197357 Msa1075090:CDS 40.0%
GATTCAGACGATGAATGGTT+TGG + chr7_2:73197603-73197622 None:intergenic 40.0%
GATCTGATTCAGACGATGAA+TGG + chr7_2:73197608-73197627 None:intergenic 40.0%
!! GAGTGGTTCTAGTTGAGTAG+TGG + chr7_2:73191336-73191355 None:intergenic 45.0%
ATGTAGCTTCCAAGGACAGA+GGG + chr7_2:73191482-73191501 None:intergenic 45.0%
GAACTCACATGTAGCTTCCA+AGG + chr7_2:73191490-73191509 None:intergenic 45.0%
AGCAGAATCATATCTGCAGC+AGG - chr7_2:73191857-73191876 Msa1075090:intron 45.0%
GCAGAATCATATCTGCAGCA+GGG - chr7_2:73191858-73191877 Msa1075090:intron 45.0%
TGCAGAAAGGATCTGGTCAA+AGG + chr7_2:73191889-73191908 None:intergenic 45.0%
! GCTTTTCTGCAGAAAGGATC+TGG + chr7_2:73191896-73191915 None:intergenic 45.0%
TCTACATGCATAGGCTGAGA+AGG + chr7_2:73192353-73192372 None:intergenic 45.0%
! GATGATGGCTCTACATGCAT+AGG + chr7_2:73192362-73192381 None:intergenic 45.0%
GCCATCATCGTCCAATTCTA+AGG - chr7_2:73192373-73192392 Msa1075090:intron 45.0%
CTCTTGGATCCACTTGTTTG+CGG + chr7_2:73192519-73192538 None:intergenic 45.0%
CAAACAAGTGGATCCAAGAG+AGG - chr7_2:73192519-73192538 Msa1075090:intron 45.0%
GTACGTGCCTTAACAGCTTT+GGG + chr7_2:73192555-73192574 None:intergenic 45.0%
TGTACGTGCCTTAACAGCTT+TGG + chr7_2:73192556-73192575 None:intergenic 45.0%
CTACCTCCGTCCCTAATTAT+AGG - chr7_2:73192746-73192765 Msa1075090:intron 45.0%
! GGTCTTATAATTAGGGACGG+AGG - chr7_2:73193015-73193034 Msa1075090:intron 45.0%
GCGAGAGAAAAATCATGGCA+AGG - chr7_2:73193100-73193119 Msa1075090:intron 45.0%
GAGAAGCAGCTAGAAAAAGC+AGG - chr7_2:73193370-73193389 Msa1075090:intron 45.0%
CAGCTAGAAAAAGCAGGCTT+AGG - chr7_2:73193376-73193395 Msa1075090:intron 45.0%
! TTTGGTGGAGGTGCAATGTT+GGG - chr7_2:73193697-73193716 Msa1075090:intron 45.0%
AGAGATCACACCTGAGCTAA+TGG + chr7_2:73193752-73193771 None:intergenic 45.0%
GAACGTTGCTTCATGTGGAT+TGG - chr7_2:73194059-73194078 Msa1075090:intron 45.0%
CATGCTTTGTGACTTACGAG+AGG + chr7_2:73194691-73194710 None:intergenic 45.0%
CTCTCGTAAGTCACAAAGCA+TGG - chr7_2:73194689-73194708 Msa1075090:intron 45.0%
GACCAACTACATGGACCAAA+TGG - chr7_2:73195128-73195147 Msa1075090:CDS 45.0%
! TGCCATTTGGTCCATGTAGT+TGG + chr7_2:73195133-73195152 None:intergenic 45.0%
ACTACATGGACCAAATGGCA+AGG - chr7_2:73195133-73195152 Msa1075090:CDS 45.0%
CTACATGGACCAAATGGCAA+GGG - chr7_2:73195134-73195153 Msa1075090:CDS 45.0%
CAAGTCATGGCCCTTATAGA+GGG + chr7_2:73195485-73195504 None:intergenic 45.0%
TCAAGTCATGGCCCTTATAG+AGG + chr7_2:73195486-73195505 None:intergenic 45.0%
AGAATCTGTTGTCCTTGGGT+AGG - chr7_2:73195553-73195572 Msa1075090:intron 45.0%
GAATCTGTTGTCCTTGGGTA+GGG - chr7_2:73195554-73195573 Msa1075090:intron 45.0%
GATGGAAGGAGTAGTTCATG+GGG + chr7_2:73195595-73195614 None:intergenic 45.0%
GGATGGAAGGAGTAGTTCAT+GGG + chr7_2:73195596-73195615 None:intergenic 45.0%
TGGATGGAAGGAGTAGTTCA+TGG + chr7_2:73195597-73195616 None:intergenic 45.0%
CACATAGATATGGGGCTAGA+GGG + chr7_2:73195967-73195986 None:intergenic 45.0%
TCACATAGATATGGGGCTAG+AGG + chr7_2:73195968-73195987 None:intergenic 45.0%
CGATCACTGTAGTGATAGGA+AGG - chr7_2:73197388-73197407 Msa1075090:CDS 45.0%
!! AGCAAGGTGTTTTCTTGCCA+TGG - chr7_2:73197645-73197664 Msa1075090:CDS 45.0%
AACTCAATGCTCGCATACGA+TGG + chr7_2:73197681-73197700 None:intergenic 45.0%
!! CTATATATTAATTAAAAATA+AGG - chr7_2:73196936-73196955 Msa1075090:intron 5.0%
!! TGATGATGACGGTGTTGAGG+TGG + chr7_2:73191362-73191381 None:intergenic 50.0%
TCTTCATCACCCTCTGTCCT+TGG - chr7_2:73191470-73191489 Msa1075090:intron 50.0%
CATGTAGCTTCCAAGGACAG+AGG + chr7_2:73191483-73191502 None:intergenic 50.0%
AGAGCCACCCAAAGCTGTTA+AGG - chr7_2:73192545-73192564 Msa1075090:intron 50.0%
GGTCCTATAATTAGGGACGG+AGG + chr7_2:73192752-73192771 None:intergenic 50.0%
TAGGGCATGTTCTTTGGTGG+AGG - chr7_2:73193685-73193704 Msa1075090:intron 50.0%
! CTTTGGTGGAGGTGCAATGT+TGG - chr7_2:73193696-73193715 Msa1075090:intron 50.0%
GCAATGTTGGGAGGAGAACA+AGG - chr7_2:73193709-73193728 Msa1075090:intron 50.0%
TGTTCGACGTGGAATATGCG+AGG - chr7_2:73193847-73193866 Msa1075090:CDS 50.0%
!! CGTTGCTTCATGTGGATTGG+TGG - chr7_2:73194062-73194081 Msa1075090:intron 50.0%
GCGAAGAATAGGGAGGGAAA+TGG - chr7_2:73194274-73194293 Msa1075090:intron 50.0%
GGAGAAGATGCTCTCTCTCA+AGG - chr7_2:73195036-73195055 Msa1075090:intron 50.0%
TGCTCTCTCTCAAGGACTTG+AGG - chr7_2:73195044-73195063 Msa1075090:intron 50.0%
TGTTCATGGCCCTTGCCATT+TGG + chr7_2:73195146-73195165 None:intergenic 50.0%
!! TGATTTCGTGGGGGTACTAC+TGG - chr7_2:73195521-73195540 Msa1075090:intron 50.0%
!! GATTTCGTGGGGGTACTACT+GGG - chr7_2:73195522-73195541 Msa1075090:intron 50.0%
AGTTCATGGGGTTGTGTGGT+AGG + chr7_2:73195583-73195602 None:intergenic 50.0%
GAGTAGTTCATGGGGTTGTG+TGG + chr7_2:73195587-73195606 None:intergenic 50.0%
ATCAGGGATGGAAACCCTAG+AGG + chr7_2:73197326-73197345 None:intergenic 50.0%
!! ACGATGGAAGTACTCAGCCA+TGG + chr7_2:73197665-73197684 None:intergenic 50.0%
!! TGCGAGCATTGAGTTCTCTG+TGG - chr7_2:73197686-73197705 Msa1075090:CDS 50.0%
!! GCGAGCATTGAGTTCTCTGT+GGG - chr7_2:73197687-73197706 Msa1075090:CDS 50.0%
! AGCATTGAGTTCTCTGTGGG+TGG - chr7_2:73197690-73197709 Msa1075090:CDS 50.0%
! GATGACGGTGTTGAGGTGGT+GGG + chr7_2:73191358-73191377 None:intergenic 55.0%
!! TGATGACGGTGTTGAGGTGG+TGG + chr7_2:73191359-73191378 None:intergenic 55.0%
!! CGTGCCTTAACAGCTTTGGG+TGG + chr7_2:73192552-73192571 None:intergenic 55.0%
AGAGGCTGCAATGTTCGACG+TGG - chr7_2:73193836-73193855 Msa1075090:intron 55.0%
TCGACGTGGAATATGCGAGG+TGG - chr7_2:73193850-73193869 Msa1075090:CDS 55.0%
GGAATATGCGAGGTGGCTTG+AGG - chr7_2:73193857-73193876 Msa1075090:CDS 55.0%
GTGGTAGGTTTCCCTACCCA+AGG + chr7_2:73195568-73195587 None:intergenic 55.0%
! TTGCTGCTTGACGCGTCGTT+AGG + chr7_2:73197630-73197649 None:intergenic 55.0%
TAACGACGCGTCAAGCAGCA+AGG - chr7_2:73197629-73197648 Msa1075090:CDS 55.0%
!! GGGTGGCTCTGATCCTCTCT+TGG + chr7_2:73192535-73192554 None:intergenic 60.0%
! GGTGGAGGTGCAATGTTGGG+AGG - chr7_2:73193700-73193719 Msa1075090:intron 60.0%
!! TCGTGGGGGTACTACTGGGT+AGG - chr7_2:73195526-73195545 Msa1075090:intron 60.0%
!! CGGTGTTGAGGTGGTGGGAG+TGG + chr7_2:73191353-73191372 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 73191302 73197732 73191302 ID=Msa1075090;Name=Msa1075090
chr7_2 mRNA 73191302 73197732 73191302 ID=Msa1075090-mRNA-1;Parent=Msa1075090;Name=Msa1075090-mRNA-1;_AED=0.14;_eAED=0.15;_QI=0|0.09|0|1|0.81|0.66|12|0|449
chr7_2 exon 73197533 73197732 73197533 ID=Msa1075090-mRNA-1:exon:17034;Parent=Msa1075090-mRNA-1
chr7_2 exon 73197304 73197407 73197304 ID=Msa1075090-mRNA-1:exon:17033;Parent=Msa1075090-mRNA-1
chr7_2 exon 73196640 73196728 73196640 ID=Msa1075090-mRNA-1:exon:17032;Parent=Msa1075090-mRNA-1
chr7_2 exon 73196464 73196539 73196464 ID=Msa1075090-mRNA-1:exon:17031;Parent=Msa1075090-mRNA-1
chr7_2 exon 73195862 73195884 73195862 ID=Msa1075090-mRNA-1:exon:17030;Parent=Msa1075090-mRNA-1
chr7_2 exon 73195630 73195689 73195630 ID=Msa1075090-mRNA-1:exon:17029;Parent=Msa1075090-mRNA-1
chr7_2 exon 73195431 73195508 73195431 ID=Msa1075090-mRNA-1:exon:17028;Parent=Msa1075090-mRNA-1
chr7_2 exon 73195274 73195346 73195274 ID=Msa1075090-mRNA-1:exon:17027;Parent=Msa1075090-mRNA-1
chr7_2 exon 73195051 73195196 73195051 ID=Msa1075090-mRNA-1:exon:17026;Parent=Msa1075090-mRNA-1
chr7_2 exon 73194925 73195035 73194925 ID=Msa1075090-mRNA-1:exon:17025;Parent=Msa1075090-mRNA-1
chr7_2 exon 73193837 73194076 73193837 ID=Msa1075090-mRNA-1:exon:17024;Parent=Msa1075090-mRNA-1
chr7_2 exon 73191302 73191451 73191302 ID=Msa1075090-mRNA-1:exon:17023;Parent=Msa1075090-mRNA-1
chr7_2 CDS 73197533 73197732 73197533 ID=Msa1075090-mRNA-1:cds;Parent=Msa1075090-mRNA-1
chr7_2 CDS 73197304 73197407 73197304 ID=Msa1075090-mRNA-1:cds;Parent=Msa1075090-mRNA-1
chr7_2 CDS 73196640 73196728 73196640 ID=Msa1075090-mRNA-1:cds;Parent=Msa1075090-mRNA-1
chr7_2 CDS 73196464 73196539 73196464 ID=Msa1075090-mRNA-1:cds;Parent=Msa1075090-mRNA-1
chr7_2 CDS 73195862 73195884 73195862 ID=Msa1075090-mRNA-1:cds;Parent=Msa1075090-mRNA-1
chr7_2 CDS 73195630 73195689 73195630 ID=Msa1075090-mRNA-1:cds;Parent=Msa1075090-mRNA-1
chr7_2 CDS 73195431 73195508 73195431 ID=Msa1075090-mRNA-1:cds;Parent=Msa1075090-mRNA-1
chr7_2 CDS 73195274 73195346 73195274 ID=Msa1075090-mRNA-1:cds;Parent=Msa1075090-mRNA-1
chr7_2 CDS 73195051 73195196 73195051 ID=Msa1075090-mRNA-1:cds;Parent=Msa1075090-mRNA-1
chr7_2 CDS 73194925 73195035 73194925 ID=Msa1075090-mRNA-1:cds;Parent=Msa1075090-mRNA-1
chr7_2 CDS 73193837 73194076 73193837 ID=Msa1075090-mRNA-1:cds;Parent=Msa1075090-mRNA-1
chr7_2 CDS 73191302 73191451 73191302 ID=Msa1075090-mRNA-1:cds;Parent=Msa1075090-mRNA-1
Gene Sequence

>Msa1075090

ATGGCTTCCAGTGTTGAAAAACCAAACCAAACCACTACTCAACTAGAACCACTCCCACCACCTCAACACCGTCATCATCAAATTCATCATCAACAACATAAACCACAACATCATCATCATCATCCAATACATGATCATAATCAAATTTCTTTTGGAATGATGCAATCTTCTTCATCACCCTCTGTCCTTGGAAGCTACATCAGAAATAAAGATTCGGGAGCTTATGATTTGGGTGAATTGGATCAAGCCCTTTTTCTCTATCTTAATGGACAAACTGACCCATCCAGTGTTCAAGACCAAAAACAAAATTCAACATCAGGAATGAGGCCACCAACTCTCAACATTTTTCCTTCTCAGCCTATGCATGTAGAGCCATCATCGTCCAATTCTAAGGCTAGCATGGAGTTAGTTTCTCCGCAAACAAGTGGATCCAAGAGAGGATCAGAGCCACCCAAAGCTGTTAAGGCACGACCTAAAACACCAGATCCTAAGATACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGAAAAAGCAGGCTTAGGAAAAAGGCATATATTCAGCAGCTTGAGTCAAGCAGAATTAAACTTAATCAGATGGAACAGGAGCTACATCATGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAATGTTGGGAGGAGAACAAGGCCTTCCTTCTATGAATACCATTAGCTCAGAGGCTGCAATGTTCGACGTGGAATATGCGAGGTGGCTTGAGGAGCACCACCGTTTAGTATGTGAACTAAGAGCTGCAGTTCATGAGCACATTCCTGAGAATGAGCTTAGAATGTTTGTGGACAAATTCTTGGCTCAATATGATCAAAGCTTAGTTGCAAAAGCAGATATATTTCATCTTGTTTCTGGCATGTGGGTTACCCCAATTGAACGTTGCTTCATGTGGATTGGTGGATTTAAACCTTCTGAACTCATTAAGATCATTGTGAGTCAAATTGAACCATTGACCGAGCAACAAATAATGGGCATATATGGATTGCAACAATCTACACAACAAGGAGAAGATGCTCTCTCTCAAGGACTTGAGGCTCTCAATCAAAATCTTTCTGAAACTATAACATCAGATTCATTGAGCTATCCTCCCAATATGACCAACTACATGGACCAAATGGCAAGGGCCATGAACAAACTCTCCACTCTTGAAAGTTTCGTGAGAGAGGCAGATAATCTACGACACCAAACCATTCATCGTCTGAATCAGATCCTAACGACGCGTCAAGCAGCAAGGTGTTTTCTTGCCATGGCTGAGTACTTCCATCGTATGCGAGCATTGAGTTCTCTGTGGGTGGCACGCCCTCGTCAAGAATAG

Protein sequence

>Msa1075090

MASSVEKPNQTTTQLEPLPPPQHRHHQIHHQQHKPQHHHHHPIHDHNQISFGMMQSSSSPSVLGSYIRNKDSGAYDLGELDQALFLYLNGQTDPSSVQDQKQNSTSGMRPPTLNIFPSQPMHVEPSSSNSKASMELVSPQTSGSKRGSEPPKAVKARPKTPDPKILRRLAQNREAARKSRLRKKAYIQQLESSRIKLNQMEQELHHARNQGMFFGGGAMLGGEQGLPSMNTISSEAAMFDVEYARWLEEHHRLVCELRAAVHEHIPENELRMFVDKFLAQYDQSLVAKADIFHLVSGMWVTPIERCFMWIGGFKPSELIKIIVSQIEPLTEQQIMGIYGLQQSTQQGEDALSQGLEALNQNLSETITSDSLSYPPNMTNYMDQMARAMNKLSTLESFVREADNLRHQTIHRLNQILTTRQAARCFLAMAEYFHRMRALSSLWVARPRQE*