Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0045380 | XP_016194089.1 | 84.582 | 467 | 51 | 3 | 143 | 588 | 20 | 486 | 0.0 | 788 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0045380 | sp|Q9SZN1|VATB2_ARATH | 84.255 | 470 | 50 | 5 | 143 | 588 | 18 | 487 | 0.0 | 781 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045060 | Msa0045380 | 0.804531 | 2.066161e-49 | -8.615850e-47 |
| Msa0045090 | Msa0045380 | 0.866630 | 2.476743e-65 | -8.615850e-47 |
| Msa0045100 | Msa0045380 | 0.971444 | 3.580723e-133 | -8.615850e-47 |
| Msa0045120 | Msa0045380 | 0.880328 | 6.011317e-70 | -8.615850e-47 |
| Msa0045140 | Msa0045380 | 0.863445 | 2.476607e-64 | -8.615850e-47 |
| Msa0045150 | Msa0045380 | 0.885816 | 5.868092e-72 | -8.615850e-47 |
| Msa0045160 | Msa0045380 | 0.957759 | 1.245212e-115 | -8.615850e-47 |
| Msa0045350 | Msa0045380 | 0.860702 | 1.718306e-63 | -8.615850e-47 |
| Msa0045370 | Msa0045380 | 0.888960 | 3.711245e-73 | -8.615850e-47 |
| Msa0045380 | Msa0045400 | 0.859749 | 3.335356e-63 | -8.615850e-47 |
| Msa0045380 | Msa0045420 | 0.902978 | 5.571039e-79 | -8.615850e-47 |
| Msa0045380 | Msa1085000 | 0.861253 | 1.168200e-63 | -8.615850e-47 |
| Msa0045380 | Msa1085010 | 0.939124 | 2.151570e-99 | -8.615850e-47 |
| Msa0045380 | Msa1426790 | 0.889292 | 2.760229e-73 | -8.615850e-47 |
| Msa0045380 | Msa1426820 | 0.941059 | 8.019401e-101 | -8.615850e-47 |
| Msa0045380 | Msa1426840 | 0.870902 | 1.027234e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0045380 | MtrunA17_Chr1g0211291 | 84.713 | 471 | 47 | 5 | 143 | 588 | 19 | 489 | 0.0 | 786 |
| Msa0045380 | MtrunA17_Chr7g0250051 | 84.681 | 470 | 48 | 5 | 143 | 588 | 18 | 487 | 0.0 | 785 |
| Msa0045380 | MtrunA17_Chr2g0301881 | 70.370 | 81 | 19 | 1 | 43 | 118 | 264 | 344 | 8.01e-24 | 106 |
| Msa0045380 | MtrunA17_Chr1g0208751 | 26.727 | 333 | 218 | 6 | 213 | 527 | 153 | 477 | 2.06e-22 | 101 |
| Msa0045380 | MtrunA17_Chr1g0208761 | 26.205 | 332 | 221 | 5 | 213 | 527 | 156 | 480 | 9.01e-22 | 99.4 |
| Msa0045380 | MtrunA17_Chr4g0015651 | 27.933 | 358 | 206 | 11 | 168 | 484 | 25 | 371 | 1.40e-21 | 98.6 |
| Msa0045380 | MtrunA17_Chr4g0016741 | 27.933 | 358 | 206 | 11 | 168 | 484 | 25 | 371 | 1.40e-21 | 98.6 |
| Msa0045380 | MtrunA17_CPg0492941 | 27.933 | 358 | 206 | 11 | 168 | 484 | 25 | 371 | 1.40e-21 | 98.6 |
| Msa0045380 | MtrunA17_Chr3g0090971 | 27.954 | 347 | 220 | 8 | 200 | 527 | 82 | 417 | 5.37e-21 | 96.7 |
| Msa0045380 | MtrunA17_Chr4g0016371 | 26.934 | 349 | 221 | 8 | 200 | 527 | 43 | 378 | 5.60e-21 | 96.3 |
| Msa0045380 | MtrunA17_CPg0493401 | 26.934 | 349 | 221 | 8 | 200 | 527 | 82 | 417 | 7.49e-21 | 95.9 |
| Msa0045380 | MtrunA17_Chr7g0229391 | 26.934 | 349 | 221 | 8 | 200 | 527 | 82 | 417 | 8.41e-21 | 95.9 |
| Msa0045380 | MtrunA17_MTg0490471 | 26.708 | 322 | 216 | 7 | 181 | 484 | 62 | 381 | 3.94e-20 | 94.0 |
| Msa0045380 | MtrunA17_Chr4g0000341 | 31.469 | 143 | 92 | 2 | 342 | 479 | 319 | 460 | 3.29e-14 | 75.9 |
| Msa0045380 | MtrunA17_Chr2g0278821 | 29.012 | 162 | 107 | 3 | 342 | 501 | 9 | 164 | 2.64e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0045380 | AT4G38510.5 | 84.255 | 470 | 50 | 5 | 143 | 588 | 25 | 494 | 0.0 | 783 |
| Msa0045380 | AT4G38510.1 | 84.255 | 470 | 50 | 5 | 143 | 588 | 18 | 487 | 0.0 | 781 |
| Msa0045380 | AT4G38510.3 | 84.255 | 470 | 50 | 5 | 143 | 588 | 18 | 487 | 0.0 | 781 |
| Msa0045380 | AT4G38510.4 | 84.255 | 470 | 50 | 5 | 143 | 588 | 18 | 487 | 0.0 | 781 |
| Msa0045380 | AT4G38510.2 | 84.255 | 470 | 50 | 5 | 143 | 588 | 18 | 487 | 0.0 | 781 |
| Msa0045380 | AT1G20260.1 | 83.795 | 469 | 51 | 6 | 143 | 586 | 17 | 485 | 0.0 | 774 |
| Msa0045380 | AT1G76030.1 | 83.019 | 477 | 57 | 6 | 134 | 586 | 8 | 484 | 0.0 | 772 |
| Msa0045380 | AT5G08690.1 | 27.714 | 350 | 224 | 8 | 197 | 527 | 138 | 477 | 2.02e-23 | 104 |
| Msa0045380 | AT5G08670.1 | 27.714 | 350 | 224 | 8 | 197 | 527 | 138 | 477 | 2.19e-23 | 104 |
| Msa0045380 | AT5G08680.1 | 27.714 | 350 | 224 | 8 | 197 | 527 | 141 | 480 | 2.80e-23 | 104 |
| Msa0045380 | ATMG01190.1 | 27.019 | 322 | 215 | 7 | 181 | 484 | 62 | 381 | 5.25e-22 | 100 |
| Msa0045380 | AT2G07698.1 | 27.103 | 321 | 214 | 7 | 182 | 484 | 333 | 651 | 1.54e-21 | 99.8 |
| Msa0045380 | ATCG00120.1 | 27.451 | 357 | 207 | 11 | 169 | 484 | 26 | 371 | 2.44e-21 | 98.2 |
| Msa0045380 | ATCG00480.1 | 26.934 | 349 | 221 | 8 | 200 | 527 | 82 | 417 | 9.87e-21 | 96.3 |
| Msa0045380 | AT1G79940.2 | 60.494 | 81 | 27 | 2 | 43 | 118 | 264 | 344 | 8.70e-18 | 87.8 |
| Msa0045380 | AT1G79940.3 | 60.494 | 81 | 27 | 2 | 43 | 118 | 264 | 344 | 8.70e-18 | 87.8 |
| Msa0045380 | AT1G79940.1 | 60.494 | 81 | 27 | 2 | 43 | 118 | 264 | 344 | 8.70e-18 | 87.8 |
| Msa0045380 | AT1G79940.4 | 60.494 | 81 | 27 | 2 | 43 | 118 | 264 | 344 | 9.47e-18 | 87.4 |
| Msa0045380 | AT1G78900.1 | 28.351 | 194 | 128 | 4 | 342 | 527 | 318 | 508 | 2.78e-14 | 76.3 |
| Msa0045380 | AT1G78900.2 | 28.351 | 194 | 128 | 4 | 342 | 527 | 318 | 508 | 2.78e-14 | 76.3 |
| Msa0045380 | AT4G21180.2 | 49.451 | 91 | 37 | 2 | 33 | 118 | 178 | 264 | 3.18e-13 | 72.8 |
| Msa0045380 | AT4G21180.1 | 49.451 | 91 | 37 | 2 | 33 | 118 | 258 | 344 | 4.05e-13 | 72.8 |
Find 140 sgRNAs with CRISPR-Local
Find 606 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGACAATCTCTTGATATT+TGG | 0.086118 | 1_1:+77309507 | None:intergenic |
| GCATGGTTAGAATTGGAATT+TGG | 0.112862 | 1_1:+77305898 | None:intergenic |
| CCTCTTGGTCGTGCTTATTT+TGG | 0.178155 | 1_1:-77310461 | Msa0045380:CDS |
| TCTTACTACTGCTGAATATC+TGG | 0.262357 | 1_1:-77306337 | Msa0045380:CDS |
| TTGACAATCTCTTGATATTT+GGG | 0.268902 | 1_1:+77309508 | None:intergenic |
| TTTACGACCGTACAGTTTAC+TGG | 0.269439 | 1_1:-77309142 | Msa0045380:CDS |
| GGGCGGATATTTAACGGTTC+TGG | 0.291085 | 1_1:-77308026 | Msa0045380:CDS |
| AAGTAAGCCTCGAGTAAAAT+TGG | 0.302617 | 1_1:+77307999 | None:intergenic |
| CATGGTTAGAATTGGAATTT+GGG | 0.316289 | 1_1:+77305899 | None:intergenic |
| CCAGGATAACCACGTCTTCC+TGG | 0.316708 | 1_1:+77305993 | None:intergenic |
| AGCAAGAGCAGACCAAGTTT+TGG | 0.325497 | 1_1:-77311584 | Msa0045380:CDS |
| TCACCACTGCAGAGTGCTAT+TGG | 0.329482 | 1_1:-77304984 | Msa0045380:intron |
| TCATTTGGCATGGTTAGAAT+TGG | 0.334129 | 1_1:+77305891 | None:intergenic |
| CACCACTGCAGAGTGCTATT+GGG | 0.340834 | 1_1:-77304983 | Msa0045380:intron |
| CAGGTATTTGAAGGTACATC+TGG | 0.345618 | 1_1:-77309178 | Msa0045380:CDS |
| GAGATTGTCAATATTCGTTT+AGG | 0.348480 | 1_1:-77309496 | Msa0045380:CDS |
| CTGTCCCTCCGTAATATATC+TGG | 0.348917 | 1_1:+77305745 | None:intergenic |
| CTGTGCAGCAATTTCATTAT+GGG | 0.352240 | 1_1:+77307746 | None:intergenic |
| TCTGTGCAGCAATTTCATTA+TGG | 0.352813 | 1_1:+77307745 | None:intergenic |
| ATTACTTCATTACCATCATT+TGG | 0.354095 | 1_1:+77305876 | None:intergenic |
| CAGCATCTCGGCTGTAAAAC+TGG | 0.358949 | 1_1:+77304457 | None:intergenic |
| ATGACTGTGTCTGGAGTTAC+CGG | 0.376731 | 1_1:-77309664 | Msa0045380:CDS |
| GAGGCTTACTTGGATATATC+AGG | 0.402927 | 1_1:-77307987 | Msa0045380:intron |
| GGTCATTCTTGAGAAAGTTA+AGG | 0.412036 | 1_1:-77309635 | Msa0045380:intron |
| TGCTGCACAGATTTGTCGTC+AGG | 0.414638 | 1_1:-77307733 | Msa0045380:CDS |
| TGGCGAAAAGGCTGTTGTTC+AGG | 0.415818 | 1_1:-77309434 | Msa0045380:intron |
| TTTACGCCCCTCAATTCTTC+CGG | 0.416790 | 1_1:+77305932 | None:intergenic |
| CAACGACAGCTTTCATTGCC+TGG | 0.422877 | 1_1:+77304770 | None:intergenic |
| CTTCATTAATACCCACTTCA+AGG | 0.424318 | 1_1:+77304661 | None:intergenic |
| TCTTCCTGGCACCTCTTCTC+TGG | 0.425819 | 1_1:+77306007 | None:intergenic |
| CACGATGCTCTTCCAAAACT+TGG | 0.428314 | 1_1:+77311572 | None:intergenic |
| TAGAGACTGGAATATATTGC+AGG | 0.434624 | 1_1:+77304551 | None:intergenic |
| ATGAAATCACTTGCAAAAGA+TGG | 0.438991 | 1_1:+77311369 | None:intergenic |
| CTGTATCATTGGACATGCTT+GGG | 0.442480 | 1_1:-77308046 | Msa0045380:CDS |
| ATGCTTGGGCGGATATTTAA+CGG | 0.445195 | 1_1:-77308032 | Msa0045380:CDS |
| CCAAGCATGTCCAATGATAC+AGG | 0.451792 | 1_1:+77308047 | None:intergenic |
| GAAGTACACGAGGGAAAATC+CGG | 0.454247 | 1_1:+77304508 | None:intergenic |
| TGATCTTACCAGATATATTA+CGG | 0.458091 | 1_1:-77305753 | Msa0045380:CDS |
| GTGATGATACGTTCGATTGT+AGG | 0.458361 | 1_1:+77306372 | None:intergenic |
| CCAGGAAGACGTGGTTATCC+TGG | 0.466984 | 1_1:-77305993 | Msa0045380:CDS |
| CCTGTATCATTGGACATGCT+TGG | 0.467212 | 1_1:-77308047 | Msa0045380:CDS |
| GTCAATATTCGTTTAGGCGA+TGG | 0.473500 | 1_1:-77309490 | Msa0045380:CDS |
| AGACCGGCAGCTGAAAATAG+AGG | 0.475986 | 1_1:+77307771 | None:intergenic |
| TGAACATGCCGGAAGAATTG+AGG | 0.476429 | 1_1:-77305940 | Msa0045380:CDS |
| CTCGAGAACTTGTCCATGCC+GGG | 0.477725 | 1_1:+77309462 | None:intergenic |
| CACTTGCAAAAGATGGAGAC+AGG | 0.478454 | 1_1:+77311376 | None:intergenic |
| GGACAAGTTCTCGAGATTGA+TGG | 0.478592 | 1_1:-77309454 | Msa0045380:CDS |
| GCACAGATTTGTCGTCAGGC+TGG | 0.482424 | 1_1:-77307729 | Msa0045380:CDS |
| ACTATTGATCAGGTATTTGA+AGG | 0.488267 | 1_1:-77309187 | Msa0045380:intron |
| GCTCTTGCTTAATGTTCTTG+AGG | 0.496316 | 1_1:+77311598 | None:intergenic |
| ACAGAATACATGACTGTGTC+TGG | 0.496594 | 1_1:-77309673 | Msa0045380:intron |
| CCAGTCTGTATCATCTCCTC+AGG | 0.497280 | 1_1:+77307843 | None:intergenic |
| TCAGGATAGGTTCTATCACT+AGG | 0.497405 | 1_1:+77307861 | None:intergenic |
| GTAATATATCTGGTAAGATC+AGG | 0.498299 | 1_1:+77305755 | None:intergenic |
| GCTGCCAGAGAAGAGGTGCC+AGG | 0.506143 | 1_1:-77306011 | Msa0045380:CDS |
| GAACATGCCGGAAGAATTGA+GGG | 0.507410 | 1_1:-77305939 | Msa0045380:CDS |
| CTCAAGAATGACCAATGGTC+CGG | 0.512187 | 1_1:+77309645 | None:intergenic |
| TCTCGAGAACTTGTCCATGC+CGG | 0.512745 | 1_1:+77309461 | None:intergenic |
| ATGTTCTTCCATCACTATCT+CGG | 0.513623 | 1_1:-77305116 | Msa0045380:CDS |
| ATGCAGGCGAGGTGCTGTCT+CGG | 0.514779 | 1_1:+77311338 | None:intergenic |
| TCCATGCAAGATCTAGAGAC+TGG | 0.515422 | 1_1:+77304538 | None:intergenic |
| TGCAGCTATGGGAGTTAACA+TGG | 0.517732 | 1_1:-77307066 | Msa0045380:CDS |
| AGAGCTTGGTGTAGTCCTCT+TGG | 0.517761 | 1_1:-77310476 | Msa0045380:CDS |
| TGCCATTGGAAAGGATGTCC+AGG | 0.518353 | 1_1:-77304788 | Msa0045380:CDS |
| ATCACTATCTCGGTTGATGA+AGG | 0.519694 | 1_1:-77305106 | Msa0045380:intron |
| ATCTTGCATGGACTTTACTC+CGG | 0.519977 | 1_1:-77304527 | Msa0045380:CDS |
| ATTCTAACCATGCCAAATGA+TGG | 0.521293 | 1_1:-77305888 | Msa0045380:intron |
| GTCTGGAGTTACCGGACCAT+TGG | 0.521668 | 1_1:-77309656 | Msa0045380:CDS |
| GGTTCTATCACTAGGGTTGA+CGG | 0.522874 | 1_1:+77307869 | None:intergenic |
| TCTCGAGATTGATGGCGAAA+AGG | 0.527436 | 1_1:-77309446 | Msa0045380:CDS |
| GTAAAACTGGTCAAGAGTCT+TGG | 0.529021 | 1_1:+77304470 | None:intergenic |
| TGGGGAGGGAATGACTAGAA+AGG | 0.531100 | 1_1:-77304964 | Msa0045380:CDS |
| CCTTCATTAGCTCTTCATGC+AGG | 0.532164 | 1_1:+77311322 | None:intergenic |
| GAATATATTGCAGGTGTCGT+AGG | 0.532438 | 1_1:+77304560 | None:intergenic |
| TTCATTACCATCATTTGGCA+TGG | 0.532782 | 1_1:+77305881 | None:intergenic |
| GTGCAACATACATTTAACCT+TGG | 0.533755 | 1_1:-77310416 | Msa0045380:intron |
| TGTCACGTCTTCTGATTCTC+CGG | 0.535001 | 1_1:-77313581 | Msa0045380:intron |
| CTGTATGCAACTTATGCCAT+TGG | 0.536747 | 1_1:-77304802 | Msa0045380:CDS |
| AGCACTTTCATCTGAGGACC+TGG | 0.537514 | 1_1:-77304740 | Msa0045380:CDS |
| TAGGCAGTTGCATAATAGAC+AGG | 0.544818 | 1_1:-77305711 | Msa0045380:intron |
| TCCAGTCTCTAGATCTTGCA+TGG | 0.545696 | 1_1:-77304539 | Msa0045380:CDS |
| CTGTATCATCTCCTCAGGAT+AGG | 0.550371 | 1_1:+77307848 | None:intergenic |
| ATCATCAATTACCAGCATCT+CGG | 0.552362 | 1_1:+77304445 | None:intergenic |
| AGTGATGGAAGAACATTGAT+TGG | 0.552550 | 1_1:+77305123 | None:intergenic |
| AACTGGTCAAGAGTCTTGGC+TGG | 0.554684 | 1_1:+77304474 | None:intergenic |
| GGAAGAATTGAGGGGCGTAA+AGG | 0.556865 | 1_1:-77305930 | Msa0045380:CDS |
| CCTGAGGAGATGATACAGAC+TGG | 0.558233 | 1_1:-77307843 | Msa0045380:CDS |
| AGAGAAAATTAGTAGATGCC+AGG | 0.561602 | 1_1:+77304722 | None:intergenic |
| ACCACTGCAGAGTGCTATTG+GGG | 0.563672 | 1_1:-77304982 | Msa0045380:intron |
| TGCCTGGACATCCTTTCCAA+TGG | 0.569487 | 1_1:+77304786 | None:intergenic |
| TAGTGAAATTGTCCTTGAAG+TGG | 0.569681 | 1_1:-77304673 | Msa0045380:CDS |
| CTGCAGAGTGCTATTGGGGA+GGG | 0.572458 | 1_1:-77304978 | Msa0045380:intron |
| GGCGATGGAACTACCCGGCA+TGG | 0.573515 | 1_1:-77309475 | Msa0045380:CDS |
| GCAACAATTTATGAACATGC+CGG | 0.577220 | 1_1:-77305951 | Msa0045380:CDS |
| CAGGCAATGAAAGCTGTCGT+TGG | 0.577939 | 1_1:-77304769 | Msa0045380:CDS |
| TGTGCAGCAATTTCATTATG+GGG | 0.578028 | 1_1:+77307747 | None:intergenic |
| TCATTCTGATGTGTCCAACC+AGG | 0.578586 | 1_1:-77304940 | Msa0045380:intron |
| CAGGATAGGTTCTATCACTA+GGG | 0.584904 | 1_1:+77307862 | None:intergenic |
| AAGAAAACGACGGGATTGAG+AGG | 0.586955 | 1_1:+77313618 | None:intergenic |
| TCGATTGAGAAGAAAACGAC+GGG | 0.590073 | 1_1:+77313609 | None:intergenic |
| ACATGGAAATTCCAGTTCGA+AGG | 0.590375 | 1_1:-77311672 | Msa0045380:intron |
| GAATATCTGGCTTATGAATG+TGG | 0.590666 | 1_1:-77306324 | Msa0045380:CDS |
| AACATAATAAGCTTCTGAAG+AGG | 0.600221 | 1_1:+77311645 | None:intergenic |
| AGTGAAATTGTCCTTGAAGT+GGG | 0.600879 | 1_1:-77304672 | Msa0045380:intron |
| ATGGAAGAACATTGATTGGT+GGG | 0.602705 | 1_1:+77305127 | None:intergenic |
| AGGTATTTGAAGGTACATCT+GGG | 0.603787 | 1_1:-77309177 | Msa0045380:CDS |
| AGGGACAGATATACATCGAT+AGG | 0.603945 | 1_1:-77305730 | Msa0045380:CDS |
| CCTGCATGAAGAGCTAATGA+AGG | 0.605404 | 1_1:-77311322 | Msa0045380:intron |
| ATTAGCTCTTCATGCAGGCG+AGG | 0.608084 | 1_1:+77311327 | None:intergenic |
| TATCATTGGACATGCTTGGG+CGG | 0.609865 | 1_1:-77308043 | Msa0045380:CDS |
| TATCTGGTAAGATCAGGAGT+TGG | 0.610819 | 1_1:+77305761 | None:intergenic |
| TTCATCAACCGAGATAGTGA+TGG | 0.612897 | 1_1:+77305108 | None:intergenic |
| AGAAGAAGCACTTTCATCTG+AGG | 0.617772 | 1_1:-77304746 | Msa0045380:CDS |
| TTATGCTGATGCTCTTCGTG+AGG | 0.621125 | 1_1:-77306265 | Msa0045380:intron |
| CCAAAATAAGCACGACCAAG+AGG | 0.622212 | 1_1:+77310461 | None:intergenic |
| GTCATGAATTCTATTGCTAG+AGG | 0.622259 | 1_1:-77307804 | Msa0045380:CDS |
| GGTATCTGCTGCCAGAGAAG+AGG | 0.624465 | 1_1:-77306018 | Msa0045380:CDS |
| GAAGAGGTGCCAGGAAGACG+TGG | 0.628045 | 1_1:-77306002 | Msa0045380:CDS |
| GACCGTACAGTTTACTGGAG+AGG | 0.629013 | 1_1:-77309137 | Msa0045380:intron |
| GTGCAGCAATTTCATTATGG+GGG | 0.632413 | 1_1:+77307748 | None:intergenic |
| TACCTCTCCAGTAAACTGTA+CGG | 0.633139 | 1_1:+77309135 | None:intergenic |
| GATGGAAGAACATTGATTGG+TGG | 0.633609 | 1_1:+77305126 | None:intergenic |
| ACTGCAGAGTGCTATTGGGG+AGG | 0.635578 | 1_1:-77304979 | Msa0045380:intron |
| GACCGGCAGCTGAAAATAGA+GGG | 0.638267 | 1_1:+77307772 | None:intergenic |
| ACTTTCTCAAGAATGACCAA+TGG | 0.645136 | 1_1:+77309640 | None:intergenic |
| GAAGTCTGATAATCTTCTTG+AGG | 0.648163 | 1_1:-77307688 | Msa0045380:intron |
| TGCAACTTATGCCATTGGAA+AGG | 0.655175 | 1_1:-77304797 | Msa0045380:CDS |
| CTTACCAGATATATTACGGA+GGG | 0.659583 | 1_1:-77305749 | Msa0045380:CDS |
| AGATCTGTATACATATAACC+AGG | 0.661413 | 1_1:+77305975 | None:intergenic |
| CAAACAAGAAGAGACCTGGT+TGG | 0.666933 | 1_1:+77304926 | None:intergenic |
| GTTTAGGCGATGGAACTACC+CGG | 0.678023 | 1_1:-77309480 | Msa0045380:CDS |
| CTCGATTGAGAAGAAAACGA+CGG | 0.679795 | 1_1:+77313608 | None:intergenic |
| GAGGTTGATGAAGAAGACGA+CGG | 0.681666 | 1_1:+77313637 | None:intergenic |
| ACTTGCAAAAGATGGAGACA+GGG | 0.688727 | 1_1:+77311377 | None:intergenic |
| TAGTGATAGAACCTATCCTG+AGG | 0.709001 | 1_1:-77307859 | Msa0045380:CDS |
| TCTTACCAGATATATTACGG+AGG | 0.728933 | 1_1:-77305750 | Msa0045380:CDS |
| ATACGATGAAGAAGTACACG+AGG | 0.729276 | 1_1:+77304498 | None:intergenic |
| GCAGTAGTAAGAGCAATACG+AGG | 0.737884 | 1_1:+77306348 | None:intergenic |
| TACGATGAAGAAGTACACGA+GGG | 0.742809 | 1_1:+77304499 | None:intergenic |
| AACATGCCGGAAGAATTGAG+GGG | 0.764342 | 1_1:-77305938 | Msa0045380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAATGAAAATATGTAT+TGG | + | chr1_1:77304488-77304507 | None:intergenic | 10.0% |
| !!! | ATATTTTAATTGAGAAAATT+GGG | - | chr1_1:77305567-77305586 | Msa0045380:intron | 10.0% |
| !!! | TTTATATGATATGTTTTAAT+AGG | - | chr1_1:77307681-77307700 | Msa0045380:intron | 10.0% |
| !! | AAAAAAAATGTATCTTAAAT+CGG | - | chr1_1:77308865-77308884 | Msa0045380:intron | 10.0% |
| !!! | TAATATATTTCTAATTATTC+AGG | - | chr1_1:77310885-77310904 | Msa0045380:intron | 10.0% |
| !!! | ATTATAATTTTTTTAACAAG+GGG | + | chr1_1:77312304-77312323 | None:intergenic | 10.0% |
| !!! | CATTATAATTTTTTTAACAA+GGG | + | chr1_1:77312305-77312324 | None:intergenic | 10.0% |
| !!! | TCATTATAATTTTTTTAACA+AGG | + | chr1_1:77312306-77312325 | None:intergenic | 10.0% |
| !!! | TTTTTTTACTTAAGCTTTAA+AGG | - | chr1_1:77304583-77304602 | Msa0045380:intron | 15.0% |
| !!! | TATCTCAATATATTTTGATT+TGG | - | chr1_1:77305265-77305284 | Msa0045380:intron | 15.0% |
| !!! | CATATTTTAATTGAGAAAAT+TGG | - | chr1_1:77305566-77305585 | Msa0045380:intron | 15.0% |
| !!! | AAATATTTTGAATTCGATTT+GGG | + | chr1_1:77305725-77305744 | None:intergenic | 15.0% |
| !!! | AAAATATTTTGAATTCGATT+TGG | + | chr1_1:77305726-77305745 | None:intergenic | 15.0% |
| !!! | TTTTAATTTTCTGTTTACTT+TGG | - | chr1_1:77306071-77306090 | Msa0045380:intron | 15.0% |
| !! | CAAAAAAAGAATACATTATT+TGG | + | chr1_1:77307272-77307291 | None:intergenic | 15.0% |
| !!! | TATTTTACTTATTGAAAAAC+TGG | - | chr1_1:77307580-77307599 | Msa0045380:intron | 15.0% |
| !!! | ATTTTACTTATTGAAAAACT+GGG | - | chr1_1:77307581-77307600 | Msa0045380:intron | 15.0% |
| !!! | AAACTACATAAATTTAAAGT+AGG | - | chr1_1:77307616-77307635 | Msa0045380:intron | 15.0% |
| !! | TGATAATCTTAATTTAAATG+TGG | + | chr1_1:77307775-77307794 | None:intergenic | 15.0% |
| !! | TGTAAATCTATTGATATATT+GGG | - | chr1_1:77308555-77308574 | Msa0045380:intron | 15.0% |
| !!! | TAAACAGCATATATTTTTAT+GGG | + | chr1_1:77309755-77309774 | None:intergenic | 15.0% |
| !!! | ATAAACAGCATATATTTTTA+TGG | + | chr1_1:77309756-77309775 | None:intergenic | 15.0% |
| !!! | TTTAACTTGAAATTTTGTAT+TGG | - | chr1_1:77310062-77310081 | Msa0045380:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr1_1:77310316-77310335 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr1_1:77310315-77310334 | Msa0045380:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr1_1:77310339-77310358 | Msa0045380:intron | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | chr1_1:77310442-77310461 | Msa0045380:CDS | 15.0% |
| !!! | TTTTAAAGATTACCAAATTA+AGG | + | chr1_1:77311806-77311825 | None:intergenic | 15.0% |
| !!! | AATTTTCTAAAAACGTTAAA+TGG | - | chr1_1:77312174-77312193 | Msa0045380:intron | 15.0% |
| !!! | TACTTCAATATTTTGTTTAA+TGG | - | chr1_1:77312223-77312242 | Msa0045380:intron | 15.0% |
| !!! | TTATAATTTTTTTAACAAGG+GGG | + | chr1_1:77312303-77312322 | None:intergenic | 15.0% |
| !! | GGTTAAGAAATAAAAATTAT+CGG | + | chr1_1:77312337-77312356 | None:intergenic | 15.0% |
| !!! | AGTAAATTTTGCTTATATTT+TGG | + | chr1_1:77313216-77313235 | None:intergenic | 15.0% |
| !!! | ATAAGCAAAATTTACTTTTT+AGG | - | chr1_1:77313220-77313239 | Msa0045380:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | chr1_1:77313318-77313337 | Msa0045380:intron | 15.0% |
| !! | ACATATATTTCTTAATCAAA+AGG | - | chr1_1:77313742-77313761 | Msa0045380:intron | 15.0% |
| !! | TTATATGTAAACTATCTTAT+TGG | - | chr1_1:77313901-77313920 | Msa0045380:intron | 15.0% |
| !!! | ATTTTCCTCAATATTATTAA+CGG | - | chr1_1:77314147-77314166 | Msa0045380:intron | 15.0% |
| !! | AGTATCTCAAAAACAAAAAT+AGG | + | chr1_1:77304678-77304697 | None:intergenic | 20.0% |
| !! | TCAACTAAAATACAAACTAT+CGG | + | chr1_1:77304745-77304764 | None:intergenic | 20.0% |
| !! | AAATTGTTAAAGTGTAAAGT+GGG | + | chr1_1:77304947-77304966 | None:intergenic | 20.0% |
| !!! | AATATTTTGAATTCGATTTG+GGG | + | chr1_1:77305724-77305743 | None:intergenic | 20.0% |
| !! | AATATACACCATATATGAAT+CGG | + | chr1_1:77305975-77305994 | None:intergenic | 20.0% |
| !! | TTCATATATGGTGTATATTT+AGG | - | chr1_1:77305976-77305995 | Msa0045380:CDS | 20.0% |
| !!! | ACTTATTGTTAAGGAAATTT+TGG | - | chr1_1:77306142-77306161 | Msa0045380:intron | 20.0% |
| !! | TTAGATGTAATCATCATTAA+AGG | - | chr1_1:77306329-77306348 | Msa0045380:CDS | 20.0% |
| !! | TAGATGTAATCATCATTAAA+GGG | - | chr1_1:77306330-77306349 | Msa0045380:CDS | 20.0% |
| !! | TTGATTCATTTAGTATTCTT+TGG | - | chr1_1:77307008-77307027 | Msa0045380:intron | 20.0% |
| !!! | ATCAATTTATTTCAAGTAGT+TGG | - | chr1_1:77308526-77308545 | Msa0045380:intron | 20.0% |
| !! | GTGTAAATCTATTGATATAT+TGG | - | chr1_1:77308554-77308573 | Msa0045380:intron | 20.0% |
| !! | AAGTTTGAACACATTTAAAA+AGG | + | chr1_1:77308951-77308970 | None:intergenic | 20.0% |
| !! | AATAAAGAGACACATAATTT+AGG | + | chr1_1:77309083-77309102 | None:intergenic | 20.0% |
| !! | AGTTAAAATTTAGTCACAAA+GGG | + | chr1_1:77309234-77309253 | None:intergenic | 20.0% |
| !! | AAGTTAAAATTTAGTCACAA+AGG | + | chr1_1:77309235-77309254 | None:intergenic | 20.0% |
| !!! | TTGTGACTAAATTTTAACTT+CGG | - | chr1_1:77309235-77309254 | Msa0045380:intron | 20.0% |
| !! | AAACTATAAAATGACGTTAA+AGG | + | chr1_1:77309560-77309579 | None:intergenic | 20.0% |
| !! | CTTTATAATAACTATTGATC+AGG | - | chr1_1:77309585-77309604 | Msa0045380:intron | 20.0% |
| !! | TAACAGTTAATGCATTATTT+AGG | + | chr1_1:77309811-77309830 | None:intergenic | 20.0% |
| !! | TATCTTCTTTATCATTATCT+GGG | + | chr1_1:77309925-77309944 | None:intergenic | 20.0% |
| !! | TTATCTTCTTTATCATTATC+TGG | + | chr1_1:77309926-77309945 | None:intergenic | 20.0% |
| !! | TAAATTCTGCTTAGAAAAAA+GGG | - | chr1_1:77310140-77310159 | Msa0045380:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr1_1:77310282-77310301 | Msa0045380:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr1_1:77310325-77310344 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr1_1:77310402-77310421 | Msa0045380:intron | 20.0% |
| !! | TAAAAGTTCTTCCTTTAAAT+TGG | - | chr1_1:77310604-77310623 | Msa0045380:intron | 20.0% |
| !! | TAAAAGCAAAATGTTAAAGA+AGG | + | chr1_1:77310639-77310658 | None:intergenic | 20.0% |
| !! | GAAAAGAAATATTATCAGAT+AGG | - | chr1_1:77311266-77311285 | Msa0045380:intron | 20.0% |
| !! | AAATATTATCAGATAGGAAA+GGG | - | chr1_1:77311272-77311291 | Msa0045380:intron | 20.0% |
| !! | TACTCATATTACATAAAGTA+TGG | + | chr1_1:77311628-77311647 | None:intergenic | 20.0% |
| !! | TACTTTATGTAATATGAGTA+AGG | - | chr1_1:77311628-77311647 | Msa0045380:CDS | 20.0% |
| !!! | TTTGATTCTTCATTTTTCTT+TGG | - | chr1_1:77311982-77312001 | Msa0045380:intron | 20.0% |
| !!! | TTGATTCTTCATTTTTCTTT+GGG | - | chr1_1:77311983-77312002 | Msa0045380:intron | 20.0% |
| !! | TAAGAAATAAAAATTATCGG+AGG | + | chr1_1:77312334-77312353 | None:intergenic | 20.0% |
| !!! | TTTTCCTAATAAATTACAGT+TGG | + | chr1_1:77312550-77312569 | None:intergenic | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | + | chr1_1:77313309-77313328 | None:intergenic | 20.0% |
| !! | ATATAAAAGCAGTTAATTGT+TGG | - | chr1_1:77313370-77313389 | Msa0045380:intron | 20.0% |
| !! | TAAAAAAAGAAAACTACACA+GGG | + | chr1_1:77313884-77313903 | None:intergenic | 20.0% |
| !! | ATAAAAAAAGAAAACTACAC+AGG | + | chr1_1:77313885-77313904 | None:intergenic | 20.0% |
| ! | AACTAAAATACAAACTATCG+GGG | + | chr1_1:77304743-77304762 | None:intergenic | 25.0% |
| ! | CAACTAAAATACAAACTATC+GGG | + | chr1_1:77304744-77304763 | None:intergenic | 25.0% |
| ! | AAGATGACTAAAAGTGAATT+GGG | + | chr1_1:77304779-77304798 | None:intergenic | 25.0% |
| ! | AAAGATGACTAAAAGTGAAT+TGG | + | chr1_1:77304780-77304799 | None:intergenic | 25.0% |
| !!! | AGATCTTTTTGGCAAAATTA+GGG | + | chr1_1:77304877-77304896 | None:intergenic | 25.0% |
| !!! | AAGATCTTTTTGGCAAAATT+AGG | + | chr1_1:77304878-77304897 | None:intergenic | 25.0% |
| ! | CAAATTGTTAAAGTGTAAAG+TGG | + | chr1_1:77304948-77304967 | None:intergenic | 25.0% |
| ! | CACTTTACACTTTAACAATT+TGG | - | chr1_1:77304946-77304965 | Msa0045380:CDS | 25.0% |
| !!! | GTTAATAAGATGGTTTTAGT+TGG | + | chr1_1:77305030-77305049 | None:intergenic | 25.0% |
| ! | TTAATTGAGAAAATTGGGTT+TGG | - | chr1_1:77305572-77305591 | Msa0045380:intron | 25.0% |
| !!! | TTTTAATTTTTGTGCTGAAG+TGG | - | chr1_1:77305616-77305635 | Msa0045380:intron | 25.0% |
| ! | AATAAACAAAAGGAAGAAAG+AGG | + | chr1_1:77306051-77306070 | None:intergenic | 25.0% |
| ! | GGATGATATACTTATTGTTA+AGG | - | chr1_1:77306133-77306152 | Msa0045380:intron | 25.0% |
| ! | AATTAGATATCAGTTGCTAA+AGG | - | chr1_1:77306230-77306249 | Msa0045380:intron | 25.0% |
| ! | ATTCCTAGATATGAGAAAAT+GGG | + | chr1_1:77306269-77306288 | None:intergenic | 25.0% |
| ! | TATTCCTAGATATGAGAAAA+TGG | + | chr1_1:77306270-77306289 | None:intergenic | 25.0% |
| ! | TTCCACAGATTTCAAATAAT+AGG | + | chr1_1:77306304-77306323 | None:intergenic | 25.0% |
| ! | TTCATGTTTGTTCTTTAGTT+TGG | - | chr1_1:77306496-77306515 | Msa0045380:intron | 25.0% |
| !! | AGATTGATACAAGAGTATAA+TGG | + | chr1_1:77306653-77306672 | None:intergenic | 25.0% |
| ! | TTGAGATTCATATAACCTAA+GGG | + | chr1_1:77306740-77306759 | None:intergenic | 25.0% |
| ! | ATTGAGATTCATATAACCTA+AGG | + | chr1_1:77306741-77306760 | None:intergenic | 25.0% |
| ! | TGATAGTTTACATACTGAAT+GGG | - | chr1_1:77306764-77306783 | Msa0045380:intron | 25.0% |
| !! | TATGCATAATATTTTGTCAC+AGG | - | chr1_1:77306788-77306807 | Msa0045380:intron | 25.0% |
| !! | ATGCATAATATTTTGTCACA+GGG | - | chr1_1:77306789-77306808 | Msa0045380:intron | 25.0% |
| !!! | AATTCCTGCTAAATTTTGAT+GGG | - | chr1_1:77306838-77306857 | Msa0045380:intron | 25.0% |
| ! | TTACACATAGAATATACAGA+GGG | + | chr1_1:77306971-77306990 | None:intergenic | 25.0% |
| ! | ATTACACATAGAATATACAG+AGG | + | chr1_1:77306972-77306991 | None:intergenic | 25.0% |
| ! | TATTATGTTCAACAAAGTCA+TGG | - | chr1_1:77307063-77307082 | Msa0045380:CDS | 25.0% |
| !!! | CACAAAATTTGTTGAATACA+TGG | - | chr1_1:77307093-77307112 | Msa0045380:CDS | 25.0% |
| ! | TCTAAACGAAAATATCATAG+GGG | + | chr1_1:77307341-77307360 | None:intergenic | 25.0% |
| ! | GTCTAAACGAAAATATCATA+GGG | + | chr1_1:77307342-77307361 | None:intergenic | 25.0% |
| ! | TGTCTAAACGAAAATATCAT+AGG | + | chr1_1:77307343-77307362 | None:intergenic | 25.0% |
| ! | ATCGAATCTAATCTATCAAA+AGG | + | chr1_1:77307511-77307530 | None:intergenic | 25.0% |
| ! | ATACTTAACAGTAAGATGAA+CGG | + | chr1_1:77307555-77307574 | None:intergenic | 25.0% |
| ! | CATGAAATATATAAAGAGAC+TGG | + | chr1_1:77307903-77307922 | None:intergenic | 25.0% |
| ! | AAAGAAATTGTTGTAGATGA+AGG | + | chr1_1:77308014-77308033 | None:intergenic | 25.0% |
| !! | TATGATTTTTCTCTGAACTT+TGG | - | chr1_1:77308136-77308155 | Msa0045380:intron | 25.0% |
| !! | TCATTGACTAGTAAATTGAA+AGG | + | chr1_1:77308191-77308210 | None:intergenic | 25.0% |
| ! | TCTTTATTACTGTTTGTTCT+TGG | - | chr1_1:77308225-77308244 | Msa0045380:intron | 25.0% |
| ! | AACAAGTTGTTTAATAGCAT+TGG | - | chr1_1:77308500-77308519 | Msa0045380:intron | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr1_1:77308781-77308800 | None:intergenic | 25.0% |
| !!! | TAGGCAACTTTTTACTTTTT+AGG | + | chr1_1:77308806-77308825 | None:intergenic | 25.0% |
| !!! | GATACATTTTTTTTTTTCCC+TGG | + | chr1_1:77308859-77308878 | None:intergenic | 25.0% |
| !! | AAAATCACACATTTTAGATC+AGG | + | chr1_1:77308895-77308914 | None:intergenic | 25.0% |
| ! | AATACCATAAGTTATCAACA+CGG | + | chr1_1:77309036-77309055 | None:intergenic | 25.0% |
| ! | TTGACAATCTCTTGATATTT+GGG | + | chr1_1:77309277-77309296 | None:intergenic | 25.0% |
| ! | ATTGACAATCTCTTGATATT+TGG | + | chr1_1:77309278-77309297 | None:intergenic | 25.0% |
| ! | AATCTTATTATGCATGCTTA+AGG | + | chr1_1:77309380-77309399 | None:intergenic | 25.0% |
| ! | TGTCTTATCTCAATGAAATT+TGG | - | chr1_1:77309776-77309795 | Msa0045380:intron | 25.0% |
| ! | CTAAATTCTGCTTAGAAAAA+AGG | - | chr1_1:77310139-77310158 | Msa0045380:intron | 25.0% |
| ! | AAATTCTGCTTAGAAAAAAG+GGG | - | chr1_1:77310141-77310160 | Msa0045380:intron | 25.0% |
| ! | TTGAAATTCTAGTAATCACA+TGG | - | chr1_1:77310179-77310198 | Msa0045380:intron | 25.0% |
| ! | TCAATTCAATAACCAATACT+TGG | + | chr1_1:77310582-77310601 | None:intergenic | 25.0% |
| !!! | TTCCTTTAAATTGGTTTTCT+TGG | - | chr1_1:77310613-77310632 | Msa0045380:intron | 25.0% |
| !!! | ACATTTTGCTTTTACTATAG+TGG | - | chr1_1:77310645-77310664 | Msa0045380:intron | 25.0% |
| !! | TGGATTTTTCTTATTGATGA+TGG | - | chr1_1:77311239-77311258 | Msa0045380:intron | 25.0% |
| ! | GAAATATTATCAGATAGGAA+AGG | - | chr1_1:77311271-77311290 | Msa0045380:intron | 25.0% |
| ! | AATATTATCAGATAGGAAAG+GGG | - | chr1_1:77311273-77311292 | Msa0045380:intron | 25.0% |
| ! | ATAATGATTAATACGTCAGT+AGG | + | chr1_1:77311448-77311467 | None:intergenic | 25.0% |
| ! | TTTATGTAATATGAGTAAGG+TGG | - | chr1_1:77311631-77311650 | Msa0045380:CDS | 25.0% |
| ! | TTACAAATCTTGATTTATGC+AGG | - | chr1_1:77311660-77311679 | Msa0045380:CDS | 25.0% |
| ! | TACAAATCTTGATTTATGCA+GGG | - | chr1_1:77311661-77311680 | Msa0045380:intron | 25.0% |
| ! | GATTACCAAATTAAGGAAAA+GGG | + | chr1_1:77311799-77311818 | None:intergenic | 25.0% |
| ! | AGATTACCAAATTAAGGAAA+AGG | + | chr1_1:77311800-77311819 | None:intergenic | 25.0% |
| ! | AACCAAAATTACCAGAATAA+GGG | + | chr1_1:77311855-77311874 | None:intergenic | 25.0% |
| ! | AAACCAAAATTACCAGAATA+AGG | + | chr1_1:77311856-77311875 | None:intergenic | 25.0% |
| ! | AATAAATGTCTCATAATGCT+TGG | - | chr1_1:77311935-77311954 | Msa0045380:intron | 25.0% |
| !!! | TGATTCTTCATTTTTCTTTG+GGG | - | chr1_1:77311984-77312003 | Msa0045380:intron | 25.0% |
| !!! | ATACTAGTTCTACATTAAGA+TGG | + | chr1_1:77312101-77312120 | None:intergenic | 25.0% |
| ! | CTTAATGTAGAACTAGTATT+TGG | - | chr1_1:77312102-77312121 | Msa0045380:intron | 25.0% |
| ! | TGTACCAACTGTAATTTATT+AGG | - | chr1_1:77312543-77312562 | Msa0045380:intron | 25.0% |
| ! | TAAAGAAAAATACAGGAGAA+TGG | + | chr1_1:77312622-77312641 | None:intergenic | 25.0% |
| !! | AATCCTCTAAAGAAAAATAC+AGG | + | chr1_1:77312629-77312648 | None:intergenic | 25.0% |
| ! | ATTACTTCATTACCATCATT+TGG | + | chr1_1:77312909-77312928 | None:intergenic | 25.0% |
| !! | ATGAATTTTGTCTTCTGTTT+TGG | - | chr1_1:77312927-77312946 | Msa0045380:intron | 25.0% |
| ! | TGATCTTACCAGATATATTA+CGG | - | chr1_1:77313029-77313048 | Msa0045380:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr1_1:77313245-77313264 | Msa0045380:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr1_1:77313245-77313264 | None:intergenic | 25.0% |
| !! | TTCAATTCTCTTTCTTTTCT+TGG | - | chr1_1:77313453-77313472 | Msa0045380:intron | 25.0% |
| !! | CAATTTTCATTGATACATCA+AGG | - | chr1_1:77313507-77313526 | Msa0045380:intron | 25.0% |
| ! | TACAACCGTTAATAATATTG+AGG | + | chr1_1:77314155-77314174 | None:intergenic | 25.0% |
| ! | ATATTATTAACGGTTGTATC+TGG | - | chr1_1:77314157-77314176 | Msa0045380:intron | 25.0% |
| !! | TCAAGGTGCAATTTTGAAAA+TGG | - | chr1_1:77304813-77304832 | Msa0045380:intron | 30.0% |
| AAATATTACTCTGTTCTGTC+TGG | + | chr1_1:77304846-77304865 | None:intergenic | 30.0% | |
| !! | GATCTTTTTGGCAAAATTAG+GGG | + | chr1_1:77304876-77304895 | None:intergenic | 30.0% |
| ! | ATCTTTTCTTCACCTATCTT+GGG | + | chr1_1:77304922-77304941 | None:intergenic | 30.0% |
| ! | AATCTTTTCTTCACCTATCT+TGG | + | chr1_1:77304923-77304942 | None:intergenic | 30.0% |
| CTCAAAAAGAAAACGAATAG+TGG | + | chr1_1:77304985-77305004 | None:intergenic | 30.0% | |
| ! | TCTCTCGATGCATTTTTATT+TGG | - | chr1_1:77305306-77305325 | Msa0045380:intron | 30.0% |
| AAAAGCAAAGTTGAAGAACA+AGG | + | chr1_1:77305371-77305390 | None:intergenic | 30.0% | |
| CTTAGAGAATTAGAGATTGT+TGG | - | chr1_1:77305394-77305413 | Msa0045380:intron | 30.0% | |
| CAGTATTTGAGTAACATAAC+CGG | + | chr1_1:77305880-77305899 | None:intergenic | 30.0% | |
| !!! | ACATTTTTTCTGTCTCATTC+TGG | - | chr1_1:77306013-77306032 | Msa0045380:CDS | 30.0% |
| TGTATGACGTAAATTGATGT+TGG | - | chr1_1:77306097-77306116 | Msa0045380:intron | 30.0% | |
| !! | GATGTTGGTAATTTACACAA+CGG | - | chr1_1:77306112-77306131 | Msa0045380:intron | 30.0% |
| ATGAGAAAATGGGAGAAAAA+AGG | + | chr1_1:77306259-77306278 | None:intergenic | 30.0% | |
| ! | GTCCTATTATTTGAAATCTG+TGG | - | chr1_1:77306299-77306318 | Msa0045380:CDS | 30.0% |
| !!! | ATAGACTTTTAGCTCATCTT+GGG | - | chr1_1:77306441-77306460 | Msa0045380:intron | 30.0% |
| !! | ATGTTTGTTCTTTAGTTTGG+TGG | - | chr1_1:77306499-77306518 | Msa0045380:intron | 30.0% |
| ! | TAAACTAGGCTTTGTAAACA+TGG | + | chr1_1:77306569-77306588 | None:intergenic | 30.0% |
| CTGATAGTTTACATACTGAA+TGG | - | chr1_1:77306763-77306782 | Msa0045380:intron | 30.0% | |
| GATAGTTTACATACTGAATG+GGG | - | chr1_1:77306765-77306784 | Msa0045380:intron | 30.0% | |
| ! | TTTGTCACAGGGATTTTAAA+TGG | - | chr1_1:77306800-77306819 | Msa0045380:intron | 30.0% |
| ! | TTGTCACAGGGATTTTAAAT+GGG | - | chr1_1:77306801-77306820 | Msa0045380:intron | 30.0% |
| CAAAATTTAGCAGGAATTGA+GGG | + | chr1_1:77306836-77306855 | None:intergenic | 30.0% | |
| TCAAAATTTAGCAGGAATTG+AGG | + | chr1_1:77306837-77306856 | None:intergenic | 30.0% | |
| ! | CAATTCCTGCTAAATTTTGA+TGG | - | chr1_1:77306837-77306856 | Msa0045380:intron | 30.0% |
| !! | ATTCCTGCTAAATTTTGATG+GGG | - | chr1_1:77306839-77306858 | Msa0045380:intron | 30.0% |
| TACACATAGAATATACAGAG+GGG | + | chr1_1:77306970-77306989 | None:intergenic | 30.0% | |
| ! | AACATAATAAGCTTCTGAAG+AGG | + | chr1_1:77307140-77307159 | None:intergenic | 30.0% |
| ATGAAATCACTTGCAAAAGA+TGG | + | chr1_1:77307416-77307435 | None:intergenic | 30.0% | |
| ! | CTTTTGCAAGTGATTTCATA+CGG | - | chr1_1:77307417-77307436 | Msa0045380:intron | 30.0% |
| !! | GTGGTTATCATCTTTAGTTT+TGG | + | chr1_1:77307756-77307775 | None:intergenic | 30.0% |
| GTCATCATTATCTTATGTGA+TGG | - | chr1_1:77307805-77307824 | Msa0045380:CDS | 30.0% | |
| TAAATGCAAGCGATAAGAAA+AGG | + | chr1_1:77307988-77308007 | None:intergenic | 30.0% | |
| ! | ATTTCTTTTCCTATGCAACT+AGG | - | chr1_1:77308026-77308045 | Msa0045380:CDS | 30.0% |
| TGTAAATCAATTGTTGTACC+AGG | - | chr1_1:77308049-77308068 | Msa0045380:CDS | 30.0% | |
| GTAAATCAATTGTTGTACCA+GGG | - | chr1_1:77308050-77308069 | Msa0045380:CDS | 30.0% | |
| ! | GCACATTTTCTATAACTTCT+TGG | + | chr1_1:77308350-77308369 | None:intergenic | 30.0% |
| !! | AATTCTAGAGTGATATACCA+AGG | + | chr1_1:77308386-77308405 | None:intergenic | 30.0% |
| ! | TTATTTCAAGTAGTTGGACT+AGG | - | chr1_1:77308532-77308551 | Msa0045380:intron | 30.0% |
| GATGTATGTGGTCTATAATA+TGG | + | chr1_1:77308769-77308788 | None:intergenic | 30.0% | |
| GATAACTTATGGTATTCGTT+TGG | - | chr1_1:77309040-77309059 | Msa0045380:intron | 30.0% | |
| GAGATTGTCAATATTCGTTT+AGG | - | chr1_1:77309286-77309305 | Msa0045380:intron | 30.0% | |
| ACTATTGATCAGGTATTTGA+AGG | - | chr1_1:77309595-77309614 | Msa0045380:intron | 30.0% | |
| CTCAATGAAATTTGGATTAC+AGG | - | chr1_1:77309784-77309803 | Msa0045380:intron | 30.0% | |
| TTATAAGTATAGCCAACCAT+CGG | + | chr1_1:77309882-77309901 | None:intergenic | 30.0% | |
| TTCTTTATCATTATCTGGGA+CGG | + | chr1_1:77309921-77309940 | None:intergenic | 30.0% | |
| TTGCATGTCATCTTGATTAA+TGG | - | chr1_1:77310006-77310025 | Msa0045380:intron | 30.0% | |
| ATACATGTAAACCTAGAAAC+TGG | - | chr1_1:77310113-77310132 | Msa0045380:intron | 30.0% | |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr1_1:77310233-77310252 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr1_1:77310234-77310253 | Msa0045380:intron | 30.0% |
| GTTAAAAACTCCTGTATCAT+TGG | - | chr1_1:77310725-77310744 | Msa0045380:intron | 30.0% | |
| ACTGCATGTTTGTTTATTTC+TGG | - | chr1_1:77310843-77310862 | Msa0045380:intron | 30.0% | |
| ! | CTCTTGAATTGTATGACTTT+TGG | - | chr1_1:77311190-77311209 | Msa0045380:intron | 30.0% |
| ATTGTGATCTGTGTTTCATT+TGG | - | chr1_1:77311219-77311238 | Msa0045380:intron | 30.0% | |
| !! | TTTGACTACTTTTGTAAAGG+CGG | + | chr1_1:77311349-77311368 | None:intergenic | 30.0% |
| !! | TGGTTTGACTACTTTTGTAA+AGG | + | chr1_1:77311352-77311371 | None:intergenic | 30.0% |
| !!! | ATAGCATTGTGCTTGTTTTA+TGG | + | chr1_1:77311372-77311391 | None:intergenic | 30.0% |
| TATAAGCAATATCACAAGTG+AGG | + | chr1_1:77311528-77311547 | None:intergenic | 30.0% | |
| TCTTATTGCCTTAGATTAAG+CGG | - | chr1_1:77311563-77311582 | Msa0045380:intron | 30.0% | |
| AAAATAGACCGCTTAATCTA+AGG | + | chr1_1:77311574-77311593 | None:intergenic | 30.0% | |
| ACAAATCTTGATTTATGCAG+GGG | - | chr1_1:77311662-77311681 | Msa0045380:intron | 30.0% | |
| ACCAAAATTACCAGAATAAG+GGG | + | chr1_1:77311854-77311873 | None:intergenic | 30.0% | |
| !! | TTTTTCCTTTCCAGTATTGA+TGG | - | chr1_1:77311888-77311907 | Msa0045380:intron | 30.0% |
| !! | TTCATTTTTCTTTGGGGATT+GGG | - | chr1_1:77311990-77312009 | Msa0045380:intron | 30.0% |
| !!! | GGATCAACATATTGTTTTTG+AGG | - | chr1_1:77312244-77312263 | Msa0045380:intron | 30.0% |
| ! | ATGTCTGTACAATTGCTATT+GGG | - | chr1_1:77312367-77312386 | Msa0045380:intron | 30.0% |
| AGAATGGTAAACACAGTAAA+AGG | + | chr1_1:77312606-77312625 | None:intergenic | 30.0% | |
| ! | TCTCCTGTATTTTTCTTTAG+AGG | - | chr1_1:77312623-77312642 | Msa0045380:intron | 30.0% |
| AGATCTGTATACATATAACC+AGG | + | chr1_1:77312810-77312829 | None:intergenic | 30.0% | |
| CATGGTTAGAATTGGAATTT+GGG | + | chr1_1:77312886-77312905 | None:intergenic | 30.0% | |
| !! | TGTCTTCTGTTTTGGATAAA+AGG | - | chr1_1:77312935-77312954 | Msa0045380:intron | 30.0% |
| GTAATATATCTGGTAAGATC+AGG | + | chr1_1:77313030-77313049 | None:intergenic | 30.0% | |
| TGCATTATTACGAGAGAATT+TGG | - | chr1_1:77313153-77313172 | Msa0045380:intron | 30.0% | |
| !!! | TGCTTATATTTTGGAACAGA+GGG | + | chr1_1:77313207-77313226 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGGAACAG+AGG | + | chr1_1:77313208-77313227 | None:intergenic | 30.0% |
| GATGTATGTGGTTCATAATA+TGG | + | chr1_1:77313272-77313291 | None:intergenic | 30.0% | |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | chr1_1:77313321-77313340 | Msa0045380:intron | 30.0% |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | chr1_1:77313322-77313341 | Msa0045380:intron | 30.0% |
| ! | TTGTGCTATATAATGGGATT+CGG | - | chr1_1:77313394-77313413 | Msa0045380:intron | 30.0% |
| !! | GGTATTCTCTCTGAAAATTT+TGG | - | chr1_1:77313415-77313434 | Msa0045380:intron | 30.0% |
| CAGGGATCATATATATTTCA+TGG | + | chr1_1:77313540-77313559 | None:intergenic | 30.0% | |
| CAATCTCATACAATTCATCA+GGG | + | chr1_1:77313558-77313577 | None:intergenic | 30.0% | |
| TAATGCTTAGAATGTTTACC+AGG | + | chr1_1:77313602-77313621 | None:intergenic | 30.0% | |
| ! | TTTCTTAATCAAAAGGTGTG+TGG | - | chr1_1:77313749-77313768 | Msa0045380:intron | 30.0% |
| ACACTCTAATGATGTATCAT+TGG | - | chr1_1:77313775-77313794 | Msa0045380:intron | 30.0% | |
| TCAAAATTGCACCTTGAATG+CGG | + | chr1_1:77304810-77304829 | None:intergenic | 35.0% | |
| ! | CGCTTGTTTCAAGATCTTTT+TGG | + | chr1_1:77304888-77304907 | None:intergenic | 35.0% |
| AAACGAATAGTGGTTCATTC+TGG | + | chr1_1:77304975-77304994 | None:intergenic | 35.0% | |
| !!! | GGTTTTGAGGGTTAATAAGA+TGG | + | chr1_1:77305040-77305059 | None:intergenic | 35.0% |
| GAACTGTAGAAAAACAGTAC+CGG | + | chr1_1:77305223-77305242 | None:intergenic | 35.0% | |
| TCGAGAGAAGAAACGAAAAA+GGG | + | chr1_1:77305294-77305313 | None:intergenic | 35.0% | |
| ATCGAGAGAAGAAACGAAAA+AGG | + | chr1_1:77305295-77305314 | None:intergenic | 35.0% | |
| AGAGAATTAGAGATTGTTGG+TGG | - | chr1_1:77305397-77305416 | Msa0045380:intron | 35.0% | |
| AACATTTAGCAAACAAGCAC+CGG | + | chr1_1:77305510-77305529 | None:intergenic | 35.0% | |
| AAGCTATCATGTAGAACTTG+TGG | - | chr1_1:77305758-77305777 | Msa0045380:CDS | 35.0% | |
| !! | AGAAGCATTTGAATTTCGCA+GGG | + | chr1_1:77305852-77305871 | None:intergenic | 35.0% |
| !! | AAGAAGCATTTGAATTTCGC+AGG | + | chr1_1:77305853-77305872 | None:intergenic | 35.0% |
| ATTCAAATGCTTCTTCTCTC+CGG | - | chr1_1:77305858-77305877 | Msa0045380:intron | 35.0% | |
| ATTGTATGCTAGACACTTAG+GGG | + | chr1_1:77305928-77305947 | None:intergenic | 35.0% | |
| GATTGTATGCTAGACACTTA+GGG | + | chr1_1:77305929-77305948 | None:intergenic | 35.0% | |
| AGATTGTATGCTAGACACTT+AGG | + | chr1_1:77305930-77305949 | None:intergenic | 35.0% | |
| CGGTGAAGTCTAAGAAATAA+AGG | + | chr1_1:77305955-77305974 | None:intergenic | 35.0% | |
| !! | AGACTTCACCGATTCATATA+TGG | - | chr1_1:77305964-77305983 | Msa0045380:CDS | 35.0% |
| !! | GTTAAGGAAATTTTGGTCTC+TGG | - | chr1_1:77306149-77306168 | Msa0045380:intron | 35.0% |
| TAGATATCAGTTGCTAAAGG+TGG | - | chr1_1:77306233-77306252 | Msa0045380:intron | 35.0% | |
| ! | TCTCCCATTTTCTCATATCT+AGG | - | chr1_1:77306263-77306282 | Msa0045380:intron | 35.0% |
| !!! | TGGGGCATATTCGTTTTTTT+GGG | + | chr1_1:77306360-77306379 | None:intergenic | 35.0% |
| !!! | ATGGGGCATATTCGTTTTTT+TGG | + | chr1_1:77306361-77306380 | None:intergenic | 35.0% |
| ! | TGATGATAATTTGTGGCGAA+AGG | + | chr1_1:77306390-77306409 | None:intergenic | 35.0% |
| !! | GCTGGTTTGATGATAATTTG+TGG | + | chr1_1:77306397-77306416 | None:intergenic | 35.0% |
| TCTATCCATGGTAAATGAGT+GGG | + | chr1_1:77306426-77306445 | None:intergenic | 35.0% | |
| ATGAGCTAAAAGTCTATCCA+TGG | + | chr1_1:77306438-77306457 | None:intergenic | 35.0% | |
| !!! | GATAGACTTTTAGCTCATCT+TGG | - | chr1_1:77306440-77306459 | Msa0045380:intron | 35.0% |
| !! | AGGCTTTGTAAACATGGTTT+TGG | + | chr1_1:77306563-77306582 | None:intergenic | 35.0% |
| ACAAAGCCTAGTTTACAACT+TGG | - | chr1_1:77306574-77306593 | Msa0045380:intron | 35.0% | |
| CAAAGCCTAGTTTACAACTT+GGG | - | chr1_1:77306575-77306594 | Msa0045380:intron | 35.0% | |
| TAGATCCCAAGTTGTAAACT+AGG | + | chr1_1:77306583-77306602 | None:intergenic | 35.0% | |
| GGGAAAGTGAAAGAGAAATA+GGG | + | chr1_1:77306720-77306739 | None:intergenic | 35.0% | |
| AGGGAAAGTGAAAGAGAAAT+AGG | + | chr1_1:77306721-77306740 | None:intergenic | 35.0% | |
| TTTCTCTTTCACTTTCCCTT+AGG | - | chr1_1:77306722-77306741 | Msa0045380:intron | 35.0% | |
| TCAACAGTTGCTAAAGTAAG+AGG | - | chr1_1:77307942-77307961 | Msa0045380:intron | 35.0% | |
| CAACAGTTGCTAAAGTAAGA+GGG | - | chr1_1:77307943-77307962 | Msa0045380:intron | 35.0% | |
| TGATTTACACCTAGTTGCAT+AGG | + | chr1_1:77308038-77308057 | None:intergenic | 35.0% | |
| ! | TTTTGTTGATACAGAGAGCT+TGG | - | chr1_1:77308292-77308311 | Msa0045380:intron | 35.0% |
| GTGCAACATACATTTAACCT+TGG | - | chr1_1:77308366-77308385 | Msa0045380:intron | 35.0% | |
| AAGTCTAAATGTATGCAGCT+GGG | + | chr1_1:77308424-77308443 | None:intergenic | 35.0% | |
| TAATTTCATAGCACGTAGCT+GGG | + | chr1_1:77308481-77308500 | None:intergenic | 35.0% | |
| TTAATTTCATAGCACGTAGC+TGG | + | chr1_1:77308482-77308501 | None:intergenic | 35.0% | |
| ! | ATGTTGCTTACATTTGAGAC+CGG | + | chr1_1:77308707-77308726 | None:intergenic | 35.0% |
| !! | CAATCCGTGTTGATAACTTA+TGG | - | chr1_1:77309029-77309048 | Msa0045380:intron | 35.0% |
| ACTTTCTCAAGAATGACCAA+TGG | + | chr1_1:77309145-77309164 | None:intergenic | 35.0% | |
| GGTCATTCTTGAGAAAGTTA+AGG | - | chr1_1:77309147-77309166 | Msa0045380:CDS | 35.0% | |
| ! | AGGTATTTGAAGGTACATCT+GGG | - | chr1_1:77309605-77309624 | Msa0045380:intron | 35.0% |
| AAAACACATAATTGAGCCGA+TGG | - | chr1_1:77309863-77309882 | Msa0045380:intron | 35.0% | |
| ! | GAATTTAGCTTCCAGTTTCT+AGG | + | chr1_1:77310127-77310146 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr1_1:77310364-77310383 | Msa0045380:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr1_1:77310368-77310387 | Msa0045380:intron | 35.0% |
| !!! | GACACTCATTTTGAAACAGA+GGG | - | chr1_1:77310472-77310491 | Msa0045380:CDS | 35.0% |
| !! | GAGTGTTAATTTGTTCTGGA+GGG | - | chr1_1:77310494-77310513 | Msa0045380:intron | 35.0% |
| !! | AGTGTTAATTTGTTCTGGAG+GGG | - | chr1_1:77310495-77310514 | Msa0045380:intron | 35.0% |
| AATACTTGGCTAAATTGCAG+AGG | + | chr1_1:77310568-77310587 | None:intergenic | 35.0% | |
| TCTGCAATTTAGCCAAGTAT+TGG | - | chr1_1:77310567-77310586 | Msa0045380:intron | 35.0% | |
| GGCCAAGAAAACCAATTTAA+AGG | + | chr1_1:77310618-77310637 | None:intergenic | 35.0% | |
| ! | ACAGGAGTTTTTAACACCTA+CGG | + | chr1_1:77310720-77310739 | None:intergenic | 35.0% |
| ! | TGGAAAACCAATTTTACTCG+AGG | - | chr1_1:77310776-77310795 | Msa0045380:intron | 35.0% |
| AAGTAAGCCTCGAGTAAAAT+TGG | + | chr1_1:77310786-77310805 | None:intergenic | 35.0% | |
| ! | AATTTTACTCGAGGCTTACT+TGG | - | chr1_1:77310785-77310804 | Msa0045380:intron | 35.0% |
| GTCATGAATTCTATTGCTAG+AGG | - | chr1_1:77310978-77310997 | Msa0045380:intron | 35.0% | |
| TGTGCAGCAATTTCATTATG+GGG | + | chr1_1:77311038-77311057 | None:intergenic | 35.0% | |
| CTGTGCAGCAATTTCATTAT+GGG | + | chr1_1:77311039-77311058 | None:intergenic | 35.0% | |
| TCTGTGCAGCAATTTCATTA+TGG | + | chr1_1:77311040-77311059 | None:intergenic | 35.0% | |
| GAAGTCTGATAATCTTCTTG+AGG | - | chr1_1:77311094-77311113 | Msa0045380:intron | 35.0% | |
| GGGGAATAAAAAATGCGATA+AGG | - | chr1_1:77311292-77311311 | Msa0045380:intron | 35.0% | |
| AATACGTCAGTAGGAACAAA+GGG | + | chr1_1:77311439-77311458 | None:intergenic | 35.0% | |
| TAATACGTCAGTAGGAACAA+AGG | + | chr1_1:77311440-77311459 | None:intergenic | 35.0% | |
| ATTCATGTCAGTTTCTTCAC+AGG | + | chr1_1:77311493-77311512 | None:intergenic | 35.0% | |
| CAAATCTTGATTTATGCAGG+GGG | - | chr1_1:77311663-77311682 | Msa0045380:intron | 35.0% | |
| !!! | GTTTTTTAAGCGTGACTTTG+AGG | - | chr1_1:77311749-77311768 | Msa0045380:intron | 35.0% |
| ! | AGTGACCCTTTTCCTTAATT+TGG | - | chr1_1:77311791-77311810 | Msa0045380:intron | 35.0% |
| TCTTTAATTCCCCCTTATTC+TGG | - | chr1_1:77311841-77311860 | Msa0045380:intron | 35.0% | |
| CCAAAATTACCAGAATAAGG+GGG | + | chr1_1:77311853-77311872 | None:intergenic | 35.0% | |
| TTCAACCATCAATACTGGAA+AGG | + | chr1_1:77311896-77311915 | None:intergenic | 35.0% | |
| !! | TTCCAGTATTGATGGTTGAA+TGG | - | chr1_1:77311896-77311915 | Msa0045380:intron | 35.0% |
| !! | CTTCATTTTTCTTTGGGGAT+TGG | - | chr1_1:77311989-77312008 | Msa0045380:intron | 35.0% |
| !! | TCATTTTTCTTTGGGGATTG+GGG | - | chr1_1:77311991-77312010 | Msa0045380:intron | 35.0% |
| !! | ACTTCACATGTGTTTGGTTT+TGG | + | chr1_1:77312136-77312155 | None:intergenic | 35.0% |
| TGTACAGACATGTAAGAAAC+AGG | + | chr1_1:77312358-77312377 | None:intergenic | 35.0% | |
| CATGTCTGTACAATTGCTAT+TGG | - | chr1_1:77312366-77312385 | Msa0045380:intron | 35.0% | |
| ! | TTGCTATTGGGATTTACTGT+AGG | - | chr1_1:77312379-77312398 | Msa0045380:intron | 35.0% |
| TCTTACTACTGCTGAATATC+TGG | - | chr1_1:77312445-77312464 | Msa0045380:intron | 35.0% | |
| ! | GAATATCTGGCTTATGAATG+TGG | - | chr1_1:77312458-77312477 | Msa0045380:intron | 35.0% |
| GCAACAATTTATGAACATGC+CGG | - | chr1_1:77312831-77312850 | Msa0045380:intron | 35.0% | |
| GCATGGTTAGAATTGGAATT+TGG | + | chr1_1:77312887-77312906 | None:intergenic | 35.0% | |
| TCATTTGGCATGGTTAGAAT+TGG | + | chr1_1:77312894-77312913 | None:intergenic | 35.0% | |
| ATTCTAACCATGCCAAATGA+TGG | - | chr1_1:77312894-77312913 | Msa0045380:intron | 35.0% | |
| TTCATTACCATCATTTGGCA+TGG | + | chr1_1:77312904-77312923 | None:intergenic | 35.0% | |
| TCTTACCAGATATATTACGG+AGG | - | chr1_1:77313032-77313051 | Msa0045380:intron | 35.0% | |
| CTTACCAGATATATTACGGA+GGG | - | chr1_1:77313033-77313052 | Msa0045380:intron | 35.0% | |
| AACTAATCCAACATGGCTTA+TGG | + | chr1_1:77313131-77313150 | None:intergenic | 35.0% | |
| ATGCAGTAACTAATCCAACA+TGG | + | chr1_1:77313138-77313157 | None:intergenic | 35.0% | |
| !! | TGTTGGCTTGTGCTATATAA+TGG | - | chr1_1:77313387-77313406 | Msa0045380:intron | 35.0% |
| !! | GTTGGCTTGTGCTATATAAT+GGG | - | chr1_1:77313388-77313407 | Msa0045380:intron | 35.0% |
| CCAATCTCATACAATTCATC+AGG | + | chr1_1:77313559-77313578 | None:intergenic | 35.0% | |
| CCTGATGAATTGTATGAGAT+TGG | - | chr1_1:77313556-77313575 | Msa0045380:intron | 35.0% | |
| ! | ATGGAAGAACATTGATTGGT+GGG | + | chr1_1:77313658-77313677 | None:intergenic | 35.0% |
| ! | AGTGATGGAAGAACATTGAT+TGG | + | chr1_1:77313662-77313681 | None:intergenic | 35.0% |
| ATGTTCTTCCATCACTATCT+CGG | - | chr1_1:77313666-77313685 | Msa0045380:CDS | 35.0% | |
| GATTTCAAAGTTCTGTCAAG+TGG | - | chr1_1:77313716-77313735 | Msa0045380:intron | 35.0% | |
| AGAGAAAATTAGTAGATGCC+AGG | + | chr1_1:77314063-77314082 | None:intergenic | 35.0% | |
| TAGTGAAATTGTCCTTGAAG+TGG | - | chr1_1:77314109-77314128 | Msa0045380:intron | 35.0% | |
| AGTGAAATTGTCCTTGAAGT+GGG | - | chr1_1:77314110-77314129 | Msa0045380:intron | 35.0% | |
| CTTCATTAATACCCACTTCA+AGG | + | chr1_1:77314124-77314143 | None:intergenic | 35.0% | |
| ! | AATTTCTGGACAAGTTTGAG+AGG | - | chr1_1:77314180-77314199 | Msa0045380:intron | 35.0% |
| TAGAGACTGGAATATATTGC+AGG | + | chr1_1:77314234-77314253 | None:intergenic | 35.0% | |
| GATCTTCCTAAACCCAAGAT+AGG | - | chr1_1:77304907-77304926 | Msa0045380:intron | 40.0% | |
| TCTTCACCTATCTTGGGTTT+AGG | + | chr1_1:77304916-77304935 | None:intergenic | 40.0% | |
| TGAGACGTTAACCTTTAACC+TGG | - | chr1_1:77305001-77305020 | Msa0045380:intron | 40.0% | |
| ! | TTAGTTGGTGTCCAGGTTAA+AGG | + | chr1_1:77305015-77305034 | None:intergenic | 40.0% |
| TCGATTGAGAAGAAAACGAC+GGG | + | chr1_1:77305176-77305195 | None:intergenic | 40.0% | |
| CTCGATTGAGAAGAAAACGA+CGG | + | chr1_1:77305177-77305196 | None:intergenic | 40.0% | |
| !!! | TTGTTTTGAATAGCTCCCTC+CGG | - | chr1_1:77305488-77305507 | Msa0045380:intron | 40.0% |
| !! | TGCCACATTTGAGCTGATTT+TGG | - | chr1_1:77305643-77305662 | Msa0045380:intron | 40.0% |
| CACCAAAATCAGCTCAAATG+TGG | + | chr1_1:77305648-77305667 | None:intergenic | 40.0% | |
| CTGGATTGTAACATGAGGAA+AGG | - | chr1_1:77306168-77306187 | Msa0045380:intron | 40.0% | |
| !! | GAGGAAAGGAGAAGCATTAT+AGG | - | chr1_1:77306182-77306201 | Msa0045380:intron | 40.0% |
| !!! | GGCATATTCGTTTTTTTGGG+TGG | + | chr1_1:77306357-77306376 | None:intergenic | 40.0% |
| ! | GATAATTTGTGGCGAAAGGT+TGG | + | chr1_1:77306386-77306405 | None:intergenic | 40.0% |
| GTCTATCCATGGTAAATGAG+TGG | + | chr1_1:77306427-77306446 | None:intergenic | 40.0% | |
| ATGCCCCATCAAAATTTAGC+AGG | + | chr1_1:77306845-77306864 | None:intergenic | 40.0% | |
| !! | CTAAATTTTGATGGGGCATC+TGG | - | chr1_1:77306846-77306865 | Msa0045380:intron | 40.0% |
| CTTCATGAAGCAAGAGTAAG+TGG | + | chr1_1:77306937-77306956 | None:intergenic | 40.0% | |
| TTGCTTCATGAAGCCTTCTT+TGG | - | chr1_1:77306944-77306963 | Msa0045380:intron | 40.0% | |
| ACATGGAAATTCCAGTTCGA+AGG | - | chr1_1:77307110-77307129 | Msa0045380:intron | 40.0% | |
| GCTCTTGCTTAATGTTCTTG+AGG | + | chr1_1:77307187-77307206 | None:intergenic | 40.0% | |
| ACTTGCAAAAGATGGAGACA+GGG | + | chr1_1:77307408-77307427 | None:intergenic | 40.0% | |
| TAGTCAATGAAGACAGCGTT+TGG | - | chr1_1:77308201-77308220 | Msa0045380:intron | 40.0% | |
| CAAGTCTAAATGTATGCAGC+TGG | + | chr1_1:77308425-77308444 | None:intergenic | 40.0% | |
| CAGCTGCATACATTTAGACT+TGG | - | chr1_1:77308423-77308442 | Msa0045380:intron | 40.0% | |
| ATCTTGTGTAATACTCCCTC+CGG | - | chr1_1:77308685-77308704 | Msa0045380:intron | 40.0% | |
| ACAGAATACATGACTGTGTC+TGG | - | chr1_1:77309109-77309128 | Msa0045380:intron | 40.0% | |
| TAACTTCGGTCAACTGCATT+AGG | - | chr1_1:77309249-77309268 | Msa0045380:intron | 40.0% | |
| AACTTCGGTCAACTGCATTA+GGG | - | chr1_1:77309250-77309269 | Msa0045380:intron | 40.0% | |
| GTCAATATTCGTTTAGGCGA+TGG | - | chr1_1:77309292-77309311 | Msa0045380:intron | 40.0% | |
| ! | GTCAGAAGCTCAGAACATTT+TGG | + | chr1_1:77309433-77309452 | None:intergenic | 40.0% |
| AATAAAGCAGACAACGATGG+AGG | + | chr1_1:77309476-77309495 | None:intergenic | 40.0% | |
| GTGAATAAAGCAGACAACGA+TGG | + | chr1_1:77309479-77309498 | None:intergenic | 40.0% | |
| ! | CAGGTATTTGAAGGTACATC+TGG | - | chr1_1:77309604-77309623 | Msa0045380:intron | 40.0% |
| ! | TATCATTATCTGGGACGGTT+TGG | + | chr1_1:77309916-77309935 | None:intergenic | 40.0% |
| GCTTAGGTGATAGTTACGAT+TGG | + | chr1_1:77309951-77309970 | None:intergenic | 40.0% | |
| TTCTGCTTAGAAAAAAGGGG+AGG | - | chr1_1:77310144-77310163 | Msa0045380:intron | 40.0% | |
| GAGGGAGTAGAATAGTAATC+AGG | + | chr1_1:77310211-77310230 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr1_1:77310229-77310248 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr1_1:77310367-77310386 | Msa0045380:intron | 40.0% |
| !!! | CGACACTCATTTTGAAACAG+AGG | - | chr1_1:77310471-77310490 | Msa0045380:CDS | 40.0% |
| !! | GAGGGAGTGTTAATTTGTTC+TGG | - | chr1_1:77310490-77310509 | Msa0045380:intron | 40.0% |
| !! | GGAGTGTTAATTTGTTCTGG+AGG | - | chr1_1:77310493-77310512 | Msa0045380:intron | 40.0% |
| !! | GTGTTAATTTGTTCTGGAGG+GGG | - | chr1_1:77310496-77310515 | Msa0045380:intron | 40.0% |
| TTGGCTAAATTGCAGAGGAA+CGG | + | chr1_1:77310563-77310582 | None:intergenic | 40.0% | |
| CTACGGATGTAAACAAGAGA+GGG | + | chr1_1:77310703-77310722 | None:intergenic | 40.0% | |
| CTGTATCATTGGACATGCTT+GGG | - | chr1_1:77310736-77310755 | Msa0045380:intron | 40.0% | |
| ATGCTTGGGCGGATATTTAA+CGG | - | chr1_1:77310750-77310769 | Msa0045380:intron | 40.0% | |
| GAGGCTTACTTGGATATATC+AGG | - | chr1_1:77310795-77310814 | Msa0045380:intron | 40.0% | |
| CAGGATAGGTTCTATCACTA+GGG | + | chr1_1:77310923-77310942 | None:intergenic | 40.0% | |
| TCAGGATAGGTTCTATCACT+AGG | + | chr1_1:77310924-77310943 | None:intergenic | 40.0% | |
| TAGTGATAGAACCTATCCTG+AGG | - | chr1_1:77310923-77310942 | Msa0045380:intron | 40.0% | |
| AATTTCATTATGGGGGAGAC+CGG | + | chr1_1:77311030-77311049 | None:intergenic | 40.0% | |
| GTGCAGCAATTTCATTATGG+GGG | + | chr1_1:77311037-77311056 | None:intergenic | 40.0% | |
| AGTTTCTTCACAGGAGTTGT+CGG | + | chr1_1:77311484-77311503 | None:intergenic | 40.0% | |
| !!! | TGCCATTGTTTTTGCAGCTA+TGG | - | chr1_1:77311704-77311723 | Msa0045380:intron | 40.0% |
| !!! | GCCATTGTTTTTGCAGCTAT+GGG | - | chr1_1:77311705-77311724 | Msa0045380:intron | 40.0% |
| TCCCATAGCTGCAAAAACAA+TGG | + | chr1_1:77311709-77311728 | None:intergenic | 40.0% | |
| ! | CCCCCTTATTCTGGTAATTT+TGG | - | chr1_1:77311850-77311869 | Msa0045380:intron | 40.0% |
| AGCCATTCAACCATCAATAC+TGG | + | chr1_1:77311901-77311920 | None:intergenic | 40.0% | |
| ACCAAACACATGTGAAGTGT+AGG | - | chr1_1:77312138-77312157 | Msa0045380:intron | 40.0% | |
| CCAAACACATGTGAAGTGTA+GGG | - | chr1_1:77312139-77312158 | Msa0045380:intron | 40.0% | |
| GTGATGATACGTTCGATTGT+AGG | + | chr1_1:77312413-77312432 | None:intergenic | 40.0% | |
| TCACTTGTTCTTGATCCTAC+AGG | - | chr1_1:77312743-77312762 | Msa0045380:intron | 40.0% | |
| TATCTGGTAAGATCAGGAGT+TGG | + | chr1_1:77313024-77313043 | None:intergenic | 40.0% | |
| AGGGACAGATATACATCGAT+AGG | - | chr1_1:77313052-77313071 | Msa0045380:intron | 40.0% | |
| TAGGCAGTTGCATAATAGAC+AGG | - | chr1_1:77313071-77313090 | Msa0045380:intron | 40.0% | |
| CAGTTGCATAATAGACAGGT+GGG | - | chr1_1:77313075-77313094 | Msa0045380:intron | 40.0% | |
| ATGAATGCCATAAGCCATGT+TGG | - | chr1_1:77313121-77313140 | Msa0045380:intron | 40.0% | |
| TACAATCAGTCTAAGTGACC+TGG | - | chr1_1:77313581-77313600 | Msa0045380:intron | 40.0% | |
| ! | GATGGAAGAACATTGATTGG+TGG | + | chr1_1:77313659-77313678 | None:intergenic | 40.0% |
| TTCATCAACCGAGATAGTGA+TGG | + | chr1_1:77313677-77313696 | None:intergenic | 40.0% | |
| !! | ATCACTATCTCGGTTGATGA+AGG | - | chr1_1:77313676-77313695 | Msa0045380:intron | 40.0% |
| CTGTATGCAACTTATGCCAT+TGG | - | chr1_1:77313980-77313999 | Msa0045380:intron | 40.0% | |
| TGCAACTTATGCCATTGGAA+AGG | - | chr1_1:77313985-77314004 | Msa0045380:intron | 40.0% | |
| !! | AGAAGAAGCACTTTCATCTG+AGG | - | chr1_1:77314036-77314055 | Msa0045380:intron | 40.0% |
| ! | ACGGTTGTATCTGGAATTTC+TGG | - | chr1_1:77314166-77314185 | Msa0045380:intron | 40.0% |
| ! | GAATATATTGCAGGTGTCGT+AGG | + | chr1_1:77314225-77314244 | None:intergenic | 40.0% |
| ATCTTGCATGGACTTTACTC+CGG | - | chr1_1:77314255-77314274 | Msa0045380:intron | 40.0% | |
| ! | TACGATGAAGAAGTACACGA+GGG | + | chr1_1:77314286-77314305 | None:intergenic | 40.0% |
| ! | ATACGATGAAGAAGTACACG+AGG | + | chr1_1:77314287-77314306 | None:intergenic | 40.0% |
| GTAAAACTGGTCAAGAGTCT+TGG | + | chr1_1:77314315-77314334 | None:intergenic | 40.0% | |
| ATACAAACTATCGGGGTGTG+CGG | + | chr1_1:77304736-77304755 | None:intergenic | 45.0% | |
| CTTTCACTCATCCGCATTCA+AGG | - | chr1_1:77304796-77304815 | Msa0045380:CDS | 45.0% | |
| ACTCTGTTCTGTCTGGTATG+TGG | + | chr1_1:77304839-77304858 | None:intergenic | 45.0% | |
| !!! | GATGGTTTTAGTTGGTGTCC+AGG | + | chr1_1:77305022-77305041 | None:intergenic | 45.0% |
| !!! | ACGGTTTTTGAGGTCTTGGA+GGG | + | chr1_1:77305129-77305148 | None:intergenic | 45.0% |
| ! | GAAGAAGACGACGGTTTTTG+AGG | + | chr1_1:77305139-77305158 | None:intergenic | 45.0% |
| !! | GAGGTTGATGAAGAAGACGA+CGG | + | chr1_1:77305148-77305167 | None:intergenic | 45.0% |
| AAGAAAACGACGGGATTGAG+AGG | + | chr1_1:77305167-77305186 | None:intergenic | 45.0% | |
| TGTCACGTCTTCTGATTCTC+CGG | - | chr1_1:77305201-77305220 | Msa0045380:intron | 45.0% | |
| ACTGAAGACAGTAGCCATCA+GGG | + | chr1_1:77305429-77305448 | None:intergenic | 45.0% | |
| AACTGAAGACAGTAGCCATC+AGG | + | chr1_1:77305430-77305449 | None:intergenic | 45.0% | |
| !! | TTTAGCAAACAAGCACCGGA+GGG | + | chr1_1:77305506-77305525 | None:intergenic | 45.0% |
| !! | ATTTAGCAAACAAGCACCGG+AGG | + | chr1_1:77305507-77305526 | None:intergenic | 45.0% |
| !! | TCGATTTGGGGCTTGTGTTA+TGG | + | chr1_1:77305712-77305731 | None:intergenic | 45.0% |
| GGTCTCTGGATTGTAACATG+AGG | - | chr1_1:77306163-77306182 | Msa0045380:intron | 45.0% | |
| TCCATGGTAAATGAGTGGGT+GGG | + | chr1_1:77306422-77306441 | None:intergenic | 45.0% | |
| ATCCATGGTAAATGAGTGGG+TGG | + | chr1_1:77306423-77306442 | None:intergenic | 45.0% | |
| !! | AATTTTGATGGGGCATCTGG+TGG | - | chr1_1:77306849-77306868 | Msa0045380:intron | 45.0% |
| !! | ATTTTGATGGGGCATCTGGT+GGG | - | chr1_1:77306850-77306869 | Msa0045380:intron | 45.0% |
| ATATACAGAGGGGCCAAAGA+AGG | + | chr1_1:77306960-77306979 | None:intergenic | 45.0% | |
| ! | AGCAAGAGCAGACCAAGTTT+TGG | - | chr1_1:77307198-77307217 | Msa0045380:intron | 45.0% |
| CACGATGCTCTTCCAAAACT+TGG | + | chr1_1:77307213-77307232 | None:intergenic | 45.0% | |
| TCATAGGGGTGAGCACAAAA+AGG | + | chr1_1:77307327-77307346 | None:intergenic | 45.0% | |
| CACTTGCAAAAGATGGAGAC+AGG | + | chr1_1:77307409-77307428 | None:intergenic | 45.0% | |
| ! | CCTTCATTAGCTCTTCATGC+AGG | + | chr1_1:77307463-77307482 | None:intergenic | 45.0% |
| CCTGCATGAAGAGCTAATGA+AGG | - | chr1_1:77307460-77307479 | Msa0045380:intron | 45.0% | |
| GAAGAGCTAATGAAGGTGAC+TGG | - | chr1_1:77307467-77307486 | Msa0045380:intron | 45.0% | |
| ATATAAACCCACACTCCCAC+AGG | + | chr1_1:77307668-77307687 | None:intergenic | 45.0% | |
| ! | GACTGGAGCATTAGACAATG+AGG | + | chr1_1:77307886-77307905 | None:intergenic | 45.0% |
| ATTCGCATTGCTTCAAACCC+TGG | + | chr1_1:77308070-77308089 | None:intergenic | 45.0% | |
| CCAAAATAAGCACGACCAAG+AGG | + | chr1_1:77308324-77308343 | None:intergenic | 45.0% | |
| ! | CCTCTTGGTCGTGCTTATTT+TGG | - | chr1_1:77308321-77308340 | Msa0045380:intron | 45.0% |
| !!! | CTTGGTCGTGCTTATTTTGG+TGG | - | chr1_1:77308324-77308343 | Msa0045380:intron | 45.0% |
| ! | TGCTTACATTTGAGACCGGA+GGG | + | chr1_1:77308703-77308722 | None:intergenic | 45.0% |
| ! | TTGCTTACATTTGAGACCGG+AGG | + | chr1_1:77308704-77308723 | None:intergenic | 45.0% |
| TGGTTTCTCACATACTCCCT+CGG | + | chr1_1:77308839-77308858 | None:intergenic | 45.0% | |
| ! | AGGGAGTATGTGAGAAACCA+GGG | - | chr1_1:77308839-77308858 | Msa0045380:intron | 45.0% |
| ! | ATGACTGTGTCTGGAGTTAC+CGG | - | chr1_1:77309118-77309137 | Msa0045380:intron | 45.0% |
| CTCAAGAATGACCAATGGTC+CGG | + | chr1_1:77309140-77309159 | None:intergenic | 45.0% | |
| GGACAAGTTCTCGAGATTGA+TGG | - | chr1_1:77309328-77309347 | Msa0045380:intron | 45.0% | |
| !! | TCTCGAGATTGATGGCGAAA+AGG | - | chr1_1:77309336-77309355 | Msa0045380:intron | 45.0% |
| CACATAATTGAGCCGATGGT+TGG | - | chr1_1:77309867-77309886 | Msa0045380:intron | 45.0% | |
| !! | ATTATCTGGGACGGTTTGGT+AGG | + | chr1_1:77309912-77309931 | None:intergenic | 45.0% |
| !! | ACAGCAGTTTTGGCATGCTT+AGG | + | chr1_1:77309967-77309986 | None:intergenic | 45.0% |
| TGACATGCAACACAGTCTGA+CGG | + | chr1_1:77309996-77310015 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr1_1:77310230-77310249 | None:intergenic | 45.0% |
| TGTAAACAAGAGAGGGACAG+AGG | + | chr1_1:77310696-77310715 | None:intergenic | 45.0% | |
| CCTACGGATGTAAACAAGAG+AGG | + | chr1_1:77310704-77310723 | None:intergenic | 45.0% | |
| ! | CCTCTCTTGTTTACATCCGT+AGG | - | chr1_1:77310701-77310720 | Msa0045380:intron | 45.0% |
| CCAAGCATGTCCAATGATAC+AGG | + | chr1_1:77310738-77310757 | None:intergenic | 45.0% | |
| CCTGTATCATTGGACATGCT+TGG | - | chr1_1:77310735-77310754 | Msa0045380:intron | 45.0% | |
| TATCATTGGACATGCTTGGG+CGG | - | chr1_1:77310739-77310758 | Msa0045380:intron | 45.0% | |
| GGTTCTATCACTAGGGTTGA+CGG | + | chr1_1:77310916-77310935 | None:intergenic | 45.0% | |
| CTGTATCATCTCCTCAGGAT+AGG | + | chr1_1:77310937-77310956 | None:intergenic | 45.0% | |
| ! | ATCCCTCTATTTTCAGCTGC+CGG | - | chr1_1:77311008-77311027 | Msa0045380:intron | 45.0% |
| CGATAAGGTTACTGTGCTGA+AGG | - | chr1_1:77311307-77311326 | Msa0045380:intron | 45.0% | |
| ATCTTGATTTATGCAGGGGG+AGG | - | chr1_1:77311666-77311685 | Msa0045380:intron | 45.0% | |
| TGCAGCTATGGGAGTTAACA+TGG | - | chr1_1:77311716-77311735 | Msa0045380:intron | 45.0% | |
| ! | AAGCGTGACTTTGAGGAGAA+TGG | - | chr1_1:77311756-77311775 | Msa0045380:intron | 45.0% |
| ! | CTTTGAGGAGAATGGCTCAA+TGG | - | chr1_1:77311764-77311783 | Msa0045380:intron | 45.0% |
| CCCTACACTTCACATGTGTT+TGG | + | chr1_1:77312142-77312161 | None:intergenic | 45.0% | |
| GCAGTAGTAAGAGCAATACG+AGG | + | chr1_1:77312437-77312456 | None:intergenic | 45.0% | |
| TTATGCTGATGCTCTTCGTG+AGG | - | chr1_1:77312517-77312536 | Msa0045380:intron | 45.0% | |
| TGAACATGCCGGAAGAATTG+AGG | - | chr1_1:77312842-77312861 | Msa0045380:intron | 45.0% | |
| GAACATGCCGGAAGAATTGA+GGG | - | chr1_1:77312843-77312862 | Msa0045380:intron | 45.0% | |
| AACATGCCGGAAGAATTGAG+GGG | - | chr1_1:77312844-77312863 | Msa0045380:intron | 45.0% | |
| TTTACGCCCCTCAATTCTTC+CGG | + | chr1_1:77312853-77312872 | None:intergenic | 45.0% | |
| CTGTCCCTCCGTAATATATC+TGG | + | chr1_1:77313040-77313059 | None:intergenic | 45.0% | |
| GCAGTTGCATAATAGACAGG+TGG | - | chr1_1:77313074-77313093 | Msa0045380:intron | 45.0% | |
| TGGCTTATGGCATTCATCAC+AGG | + | chr1_1:77313118-77313137 | None:intergenic | 45.0% | |
| TCATTCTGATGTGTCCAACC+AGG | - | chr1_1:77313842-77313861 | Msa0045380:intron | 45.0% | |
| CAAACAAGAAGAGACCTGGT+TGG | + | chr1_1:77313859-77313878 | None:intergenic | 45.0% | |
| GGAACAAACAAGAAGAGACC+TGG | + | chr1_1:77313863-77313882 | None:intergenic | 45.0% | |
| TCCAGTCTCTAGATCTTGCA+TGG | - | chr1_1:77314243-77314262 | Msa0045380:intron | 45.0% | |
| TCCATGCAAGATCTAGAGAC+TGG | + | chr1_1:77314247-77314266 | None:intergenic | 45.0% | |
| GAAGTACACGAGGGAAAATC+CGG | + | chr1_1:77314277-77314296 | None:intergenic | 45.0% | |
| !! | AAAATTAAAAAATAAACAAA+AGG | + | chr1_1:77306061-77306080 | None:intergenic | 5.0% |
| TACAAACTATCGGGGTGTGC+GGG | + | chr1_1:77304735-77304754 | None:intergenic | 50.0% | |
| !!! | AGCGGGTTCAGTGGTTTTGA+GGG | + | chr1_1:77305052-77305071 | None:intergenic | 50.0% |
| ! | GTGATGAGTGGGTTTCACGA+CGG | + | chr1_1:77305088-77305107 | None:intergenic | 50.0% |
| !! | GCAACTCTGAGGTGATGAGT+GGG | + | chr1_1:77305099-77305118 | None:intergenic | 50.0% |
| !! | AGCAACTCTGAGGTGATGAG+TGG | + | chr1_1:77305100-77305119 | None:intergenic | 50.0% |
| !!! | GACGGTTTTTGAGGTCTTGG+AGG | + | chr1_1:77305130-77305149 | None:intergenic | 50.0% |
| !!! | GACGACGGTTTTTGAGGTCT+TGG | + | chr1_1:77305133-77305152 | None:intergenic | 50.0% |
| !! | GTTGGTGGTATCATCCCTGA+TGG | - | chr1_1:77305412-77305431 | Msa0045380:intron | 50.0% |
| TGTGGCGAAAGGTTGGAGAT+GGG | + | chr1_1:77306379-77306398 | None:intergenic | 50.0% | |
| TTGTGGCGAAAGGTTGGAGA+TGG | + | chr1_1:77306380-77306399 | None:intergenic | 50.0% | |
| CCATGGTAAATGAGTGGGTG+GGG | + | chr1_1:77306421-77306440 | None:intergenic | 50.0% | |
| GAAGAGGTTGTCCTTCGAAC+TGG | + | chr1_1:77307124-77307143 | None:intergenic | 50.0% | |
| !! | AGAGCATCGTGTACTAGCAG+AGG | - | chr1_1:77307222-77307241 | Msa0045380:intron | 50.0% |
| ! | ATTAGCTCTTCATGCAGGCG+AGG | + | chr1_1:77307458-77307477 | None:intergenic | 50.0% |
| AGTAGGCTGAACTGCACTTG+TGG | - | chr1_1:77307633-77307652 | Msa0045380:intron | 50.0% | |
| TTGTGGCAAGCTCTTCCTGT+GGG | - | chr1_1:77307650-77307669 | Msa0045380:intron | 50.0% | |
| !! | AGAGCTTGGTGTAGTCCTCT+TGG | - | chr1_1:77308306-77308325 | Msa0045380:intron | 50.0% |
| ! | TTGCCTACATTTGAGACCCG+AGG | - | chr1_1:77308819-77308838 | Msa0045380:intron | 50.0% |
| ! | TGCCTACATTTGAGACCCGA+GGG | - | chr1_1:77308820-77308839 | Msa0045380:intron | 50.0% |
| GGTTTCTCACATACTCCCTC+GGG | + | chr1_1:77308838-77308857 | None:intergenic | 50.0% | |
| ! | GAGGGAGTATGTGAGAAACC+AGG | - | chr1_1:77308838-77308857 | Msa0045380:intron | 50.0% |
| GTTTAGGCGATGGAACTACC+CGG | - | chr1_1:77309302-77309321 | Msa0045380:intron | 50.0% | |
| TCTCGAGAACTTGTCCATGC+CGG | + | chr1_1:77309324-77309343 | None:intergenic | 50.0% | |
| TGGCGAAAAGGCTGTTGTTC+AGG | - | chr1_1:77309348-77309367 | Msa0045380:intron | 50.0% | |
| ! | ACGGGGGATAACAGCAGTTT+TGG | + | chr1_1:77309977-77309996 | None:intergenic | 50.0% |
| ACATGCAACACAGTCTGACG+GGG | + | chr1_1:77309994-77310013 | None:intergenic | 50.0% | |
| GACATGCAACACAGTCTGAC+GGG | + | chr1_1:77309995-77310014 | None:intergenic | 50.0% | |
| ! | TTCTGGAGGGGGAATTTCTC+AGG | - | chr1_1:77310507-77310526 | Msa0045380:intron | 50.0% |
| ATTGCAGAGGAACGGAGGAT+GGG | + | chr1_1:77310555-77310574 | None:intergenic | 50.0% | |
| AATTGCAGAGGAACGGAGGA+TGG | + | chr1_1:77310556-77310575 | None:intergenic | 50.0% | |
| GCTAAATTGCAGAGGAACGG+AGG | + | chr1_1:77310560-77310579 | None:intergenic | 50.0% | |
| GGGCGGATATTTAACGGTTC+TGG | - | chr1_1:77310756-77310775 | Msa0045380:intron | 50.0% | |
| CCAGTCTGTATCATCTCCTC+AGG | + | chr1_1:77310942-77310961 | None:intergenic | 50.0% | |
| CCTGAGGAGATGATACAGAC+TGG | - | chr1_1:77310939-77310958 | Msa0045380:intron | 50.0% | |
| GACCGGCAGCTGAAAATAGA+GGG | + | chr1_1:77311013-77311032 | None:intergenic | 50.0% | |
| AGACCGGCAGCTGAAAATAG+AGG | + | chr1_1:77311014-77311033 | None:intergenic | 50.0% | |
| TGCTGCACAGATTTGTCGTC+AGG | - | chr1_1:77311049-77311068 | Msa0045380:intron | 50.0% | |
| ! | GGAAGAATTGAGGGGCGTAA+AGG | - | chr1_1:77312852-77312871 | Msa0045380:intron | 50.0% |
| ! | TCACCACTGCAGAGTGCTAT+TGG | - | chr1_1:77313798-77313817 | Msa0045380:intron | 50.0% |
| ! | CACCACTGCAGAGTGCTATT+GGG | - | chr1_1:77313799-77313818 | Msa0045380:intron | 50.0% |
| ! | ACCACTGCAGAGTGCTATTG+GGG | - | chr1_1:77313800-77313819 | Msa0045380:intron | 50.0% |
| TGGGGAGGGAATGACTAGAA+AGG | - | chr1_1:77313818-77313837 | Msa0045380:intron | 50.0% | |
| TGCCATTGGAAAGGATGTCC+AGG | - | chr1_1:77313994-77314013 | Msa0045380:intron | 50.0% | |
| TGCCTGGACATCCTTTCCAA+TGG | + | chr1_1:77313999-77314018 | None:intergenic | 50.0% | |
| CAACGACAGCTTTCATTGCC+TGG | + | chr1_1:77314015-77314034 | None:intergenic | 50.0% | |
| CAGGCAATGAAAGCTGTCGT+TGG | - | chr1_1:77314013-77314032 | Msa0045380:intron | 50.0% | |
| AGCACTTTCATCTGAGGACC+TGG | - | chr1_1:77314042-77314061 | Msa0045380:intron | 50.0% | |
| !! | TGAGAGGAAGTTTGTTGCCC+AGG | - | chr1_1:77314196-77314215 | Msa0045380:intron | 50.0% |
| !! | GAGAGGAAGTTTGTTGCCCA+GGG | - | chr1_1:77314197-77314216 | Msa0045380:intron | 50.0% |
| AACTGGTCAAGAGTCTTGGC+TGG | + | chr1_1:77314311-77314330 | None:intergenic | 50.0% | |
| CAGCATCTCGGCTGTAAAAC+TGG | + | chr1_1:77314328-77314347 | None:intergenic | 50.0% | |
| ! | CAGTTTTACAGCCGAGATGC+TGG | - | chr1_1:77314326-77314345 | Msa0045380:intron | 50.0% |
| !! | GAGCGGGTTCAGTGGTTTTG+AGG | + | chr1_1:77305053-77305072 | None:intergenic | 55.0% |
| ! | ATGAGTGGGTTTCACGACGG+CGG | + | chr1_1:77305085-77305104 | None:intergenic | 55.0% |
| AGGGTTTCGCAGCAACTCTG+AGG | + | chr1_1:77305110-77305129 | None:intergenic | 55.0% | |
| GTGGCGAAAGGTTGGAGATG+GGG | + | chr1_1:77306378-77306397 | None:intergenic | 55.0% | |
| TAAATGAGTGGGTGGGGAGC+TGG | + | chr1_1:77306415-77306434 | None:intergenic | 55.0% | |
| CCCCACCCACTCATTTACCA+TGG | - | chr1_1:77306418-77306437 | Msa0045380:intron | 55.0% | |
| CTTGTGGCAAGCTCTTCCTG+TGG | - | chr1_1:77307649-77307668 | Msa0045380:intron | 55.0% | |
| AAGCTCTTCCTGTGGGAGTG+TGG | - | chr1_1:77307657-77307676 | Msa0045380:intron | 55.0% | |
| ! | AGCTCTTCCTGTGGGAGTGT+GGG | - | chr1_1:77307658-77307677 | Msa0045380:intron | 55.0% |
| ATGCAGCTGGGAACACGTTC+AGG | + | chr1_1:77308412-77308431 | None:intergenic | 55.0% | |
| CTCCCTCGGGTCTCAAATGT+AGG | + | chr1_1:77308825-77308844 | None:intergenic | 55.0% | |
| ! | GTCTGGAGTTACCGGACCAT+TGG | - | chr1_1:77309126-77309145 | Msa0045380:intron | 55.0% |
| CTCGAGAACTTGTCCATGCC+GGG | + | chr1_1:77309323-77309342 | None:intergenic | 55.0% | |
| CATGCAACACAGTCTGACGG+GGG | + | chr1_1:77309993-77310012 | None:intergenic | 55.0% | |
| AGAGGGACAGAGGAAGTCAG+AGG | + | chr1_1:77310686-77310705 | None:intergenic | 55.0% | |
| GCACAGATTTGTCGTCAGGC+TGG | - | chr1_1:77311053-77311072 | Msa0045380:intron | 55.0% | |
| CTCTGGCAGCAGATACCTGT+AGG | + | chr1_1:77312761-77312780 | None:intergenic | 55.0% | |
| GGTATCTGCTGCCAGAGAAG+AGG | - | chr1_1:77312764-77312783 | Msa0045380:intron | 55.0% | |
| TCTTCCTGGCACCTCTTCTC+TGG | + | chr1_1:77312778-77312797 | None:intergenic | 55.0% | |
| CCAGGATAACCACGTCTTCC+TGG | + | chr1_1:77312792-77312811 | None:intergenic | 55.0% | |
| CCAGGAAGACGTGGTTATCC+TGG | - | chr1_1:77312789-77312808 | Msa0045380:intron | 55.0% | |
| TCCCCAATAGCACTCTGCAG+TGG | + | chr1_1:77313804-77313823 | None:intergenic | 55.0% | |
| ! | ACTGCAGAGTGCTATTGGGG+AGG | - | chr1_1:77313803-77313822 | Msa0045380:intron | 55.0% |
| ! | CTGCAGAGTGCTATTGGGGA+GGG | - | chr1_1:77313804-77313823 | Msa0045380:intron | 55.0% |
| ACTATCGGGGTGTGCGGGTA+TGG | + | chr1_1:77304730-77304749 | None:intergenic | 60.0% | |
| !! | ATGCAGGCGAGGTGCTGTCT+CGG | + | chr1_1:77307447-77307466 | None:intergenic | 60.0% |
| GGGACAGAGGAAGTCAGAGG+TGG | + | chr1_1:77310683-77310702 | None:intergenic | 60.0% | |
| !! | GAAGAGGTGCCAGGAAGACG+TGG | - | chr1_1:77312780-77312799 | Msa0045380:intron | 60.0% |
| TCGGGGTGTGCGGGTATGGT+GGG | + | chr1_1:77304726-77304745 | None:intergenic | 65.0% | |
| ATCGGGGTGTGCGGGTATGG+TGG | + | chr1_1:77304727-77304746 | None:intergenic | 65.0% | |
| ! | GGGTGGATGAGCGGGTTCAG+TGG | + | chr1_1:77305061-77305080 | None:intergenic | 65.0% |
| GTGGGTTTCACGACGGCGGT+GGG | + | chr1_1:77305081-77305100 | None:intergenic | 65.0% | |
| ! | AGTGGGTTTCACGACGGCGG+TGG | + | chr1_1:77305082-77305101 | None:intergenic | 65.0% |
| GGCGATGGAACTACCCGGCA+TGG | - | chr1_1:77309307-77309326 | Msa0045380:intron | 65.0% | |
| !! | GCTGCCAGAGAAGAGGTGCC+AGG | - | chr1_1:77312771-77312790 | Msa0045380:intron | 65.0% |
| ! | GCAGGTGTCGTAGGCTCCCT+GGG | + | chr1_1:77314216-77314235 | None:intergenic | 65.0% |
| ! | TGCAGGTGTCGTAGGCTCCC+TGG | + | chr1_1:77314217-77314236 | None:intergenic | 65.0% |
| GGGGTGTGCGGGTATGGTGG+GGG | + | chr1_1:77304724-77304743 | None:intergenic | 70.0% | |
| CGGGGTGTGCGGGTATGGTG+GGG | + | chr1_1:77304725-77304744 | None:intergenic | 70.0% | |
| ACGGCGGTGGGTGGATGAGC+GGG | + | chr1_1:77305069-77305088 | None:intergenic | 70.0% | |
| GACGGCGGTGGGTGGATGAG+CGG | + | chr1_1:77305070-77305089 | None:intergenic | 70.0% | |
| GGTTTCACGACGGCGGTGGG+TGG | + | chr1_1:77305078-77305097 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 77304449 | 77314355 | 77304449 | ID=Msa0045380;Name=Msa0045380 |
| chr1_1 | mRNA | 77304449 | 77314355 | 77304449 | ID=Msa0045380-mRNA-1;Parent=Msa0045380;Name=Msa0045380-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0.68|0.6|0.9|0.73|0.85|20|0|588 |
| chr1_1 | exon | 77314351 | 77314355 | 77314351 | ID=Msa0045380-mRNA-1:exon:26402;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77314200 | 77314207 | 77314200 | ID=Msa0045380-mRNA-1:exon:26401;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77313582 | 77313691 | 77313582 | ID=Msa0045380-mRNA-1:exon:26400;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77311573 | 77311679 | 77311573 | ID=Msa0045380-mRNA-1:exon:26399;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77311323 | 77311440 | 77311323 | ID=Msa0045380-mRNA-1:exon:26398;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77310417 | 77310498 | 77310417 | ID=Msa0045380-mRNA-1:exon:26397;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77309636 | 77309691 | 77309636 | ID=Msa0045380-mRNA-1:exon:26396;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77309435 | 77309533 | 77309435 | ID=Msa0045380-mRNA-1:exon:26395;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77309138 | 77309197 | 77309138 | ID=Msa0045380-mRNA-1:exon:26394;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77307988 | 77308081 | 77307988 | ID=Msa0045380-mRNA-1:exon:26393;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77307689 | 77307897 | 77307689 | ID=Msa0045380-mRNA-1:exon:26392;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77307045 | 77307122 | 77307045 | ID=Msa0045380-mRNA-1:exon:26391;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77306266 | 77306403 | 77306266 | ID=Msa0045380-mRNA-1:exon:26390;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77305889 | 77306039 | 77305889 | ID=Msa0045380-mRNA-1:exon:26389;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77305712 | 77305794 | 77305712 | ID=Msa0045380-mRNA-1:exon:26388;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77305107 | 77305154 | 77305107 | ID=Msa0045380-mRNA-1:exon:26387;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77304941 | 77304994 | 77304941 | ID=Msa0045380-mRNA-1:exon:26386;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77304716 | 77304824 | 77304716 | ID=Msa0045380-mRNA-1:exon:26385;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77304673 | 77304692 | 77304673 | ID=Msa0045380-mRNA-1:exon:26384;Parent=Msa0045380-mRNA-1 |
| chr1_1 | exon | 77304449 | 77304586 | 77304449 | ID=Msa0045380-mRNA-1:exon:26383;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77314351 | 77314355 | 77314351 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77314200 | 77314207 | 77314200 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77313582 | 77313691 | 77313582 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77311573 | 77311679 | 77311573 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77311323 | 77311440 | 77311323 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77310417 | 77310498 | 77310417 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77309636 | 77309691 | 77309636 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77309435 | 77309533 | 77309435 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77309138 | 77309197 | 77309138 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77307988 | 77308081 | 77307988 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77307689 | 77307897 | 77307689 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77307045 | 77307122 | 77307045 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77306266 | 77306403 | 77306266 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77305889 | 77306039 | 77305889 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77305712 | 77305794 | 77305712 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77305107 | 77305154 | 77305107 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77304941 | 77304994 | 77304941 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77304716 | 77304824 | 77304716 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77304673 | 77304692 | 77304673 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| chr1_1 | CDS | 77304449 | 77304586 | 77304449 | ID=Msa0045380-mRNA-1:cds;Parent=Msa0045380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
