Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426820 | XP_016194089.1 | 84.582 | 467 | 51 | 3 | 143 | 588 | 20 | 486 | 0.0 | 788 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426820 | sp|Q9SZN1|VATB2_ARATH | 84.255 | 470 | 50 | 5 | 143 | 588 | 18 | 487 | 0.0 | 781 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426820 | A0A834XBV2 | 84.681 | 470 | 48 | 5 | 143 | 588 | 20 | 489 | 0.0 | 787 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045080 | Msa1426820 | 0.809639 | 1.713093e-50 | -8.615850e-47 |
| Msa0045090 | Msa1426820 | 0.888400 | 6.108804e-73 | -8.615850e-47 |
| Msa0045100 | Msa1426820 | 0.939965 | 5.217330e-100 | -8.615850e-47 |
| Msa0045120 | Msa1426820 | 0.893221 | 7.694352e-75 | -8.615850e-47 |
| Msa0045140 | Msa1426820 | 0.880095 | 7.277910e-70 | -8.615850e-47 |
| Msa0045150 | Msa1426820 | 0.902447 | 9.604214e-79 | -8.615850e-47 |
| Msa0045160 | Msa1426820 | 0.940420 | 2.405844e-100 | -8.615850e-47 |
| Msa0045350 | Msa1426820 | 0.893151 | 8.208167e-75 | -8.615850e-47 |
| Msa0045370 | Msa1426820 | 0.903985 | 1.967781e-79 | -8.615850e-47 |
| Msa0045380 | Msa1426820 | 0.941059 | 8.019401e-101 | -8.615850e-47 |
| Msa0045400 | Msa1426820 | 0.871041 | 9.244786e-67 | -8.615850e-47 |
| Msa0045420 | Msa1426820 | 0.894931 | 1.549160e-75 | -8.615850e-47 |
| Msa1426790 | Msa1426820 | 0.898932 | 3.267158e-77 | -8.615850e-47 |
| Msa1426820 | Msa1426840 | 0.895793 | 6.837367e-76 | -8.615850e-47 |
| Msa1085000 | Msa1426820 | 0.878069 | 3.784415e-69 | -8.615850e-47 |
| Msa1085010 | Msa1426820 | 0.952481 | 2.209357e-110 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426820 | MtrunA17_Chr1g0211291 | 84.713 | 471 | 47 | 5 | 143 | 588 | 19 | 489 | 0.0 | 786 |
| Msa1426820 | MtrunA17_Chr7g0250051 | 84.681 | 470 | 48 | 5 | 143 | 588 | 18 | 487 | 0.0 | 785 |
| Msa1426820 | MtrunA17_Chr2g0301881 | 70.370 | 81 | 19 | 1 | 43 | 118 | 264 | 344 | 8.01e-24 | 106 |
| Msa1426820 | MtrunA17_Chr1g0208751 | 26.727 | 333 | 218 | 6 | 213 | 527 | 153 | 477 | 2.06e-22 | 101 |
| Msa1426820 | MtrunA17_Chr1g0208761 | 26.205 | 332 | 221 | 5 | 213 | 527 | 156 | 480 | 9.01e-22 | 99.4 |
| Msa1426820 | MtrunA17_Chr4g0015651 | 27.933 | 358 | 206 | 11 | 168 | 484 | 25 | 371 | 1.40e-21 | 98.6 |
| Msa1426820 | MtrunA17_Chr4g0016741 | 27.933 | 358 | 206 | 11 | 168 | 484 | 25 | 371 | 1.40e-21 | 98.6 |
| Msa1426820 | MtrunA17_CPg0492941 | 27.933 | 358 | 206 | 11 | 168 | 484 | 25 | 371 | 1.40e-21 | 98.6 |
| Msa1426820 | MtrunA17_Chr3g0090971 | 27.954 | 347 | 220 | 8 | 200 | 527 | 82 | 417 | 5.37e-21 | 96.7 |
| Msa1426820 | MtrunA17_Chr4g0016371 | 26.934 | 349 | 221 | 8 | 200 | 527 | 43 | 378 | 5.60e-21 | 96.3 |
| Msa1426820 | MtrunA17_CPg0493401 | 26.934 | 349 | 221 | 8 | 200 | 527 | 82 | 417 | 7.49e-21 | 95.9 |
| Msa1426820 | MtrunA17_Chr7g0229391 | 26.934 | 349 | 221 | 8 | 200 | 527 | 82 | 417 | 8.41e-21 | 95.9 |
| Msa1426820 | MtrunA17_MTg0490471 | 26.708 | 322 | 216 | 7 | 181 | 484 | 62 | 381 | 3.94e-20 | 94.0 |
| Msa1426820 | MtrunA17_Chr4g0000341 | 31.469 | 143 | 92 | 2 | 342 | 479 | 319 | 460 | 3.29e-14 | 75.9 |
| Msa1426820 | MtrunA17_Chr2g0278821 | 29.012 | 162 | 107 | 3 | 342 | 501 | 9 | 164 | 2.64e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426820 | AT4G38510.5 | 84.255 | 470 | 50 | 5 | 143 | 588 | 25 | 494 | 0.0 | 783 |
| Msa1426820 | AT4G38510.1 | 84.255 | 470 | 50 | 5 | 143 | 588 | 18 | 487 | 0.0 | 781 |
| Msa1426820 | AT4G38510.3 | 84.255 | 470 | 50 | 5 | 143 | 588 | 18 | 487 | 0.0 | 781 |
| Msa1426820 | AT4G38510.4 | 84.255 | 470 | 50 | 5 | 143 | 588 | 18 | 487 | 0.0 | 781 |
| Msa1426820 | AT4G38510.2 | 84.255 | 470 | 50 | 5 | 143 | 588 | 18 | 487 | 0.0 | 781 |
| Msa1426820 | AT1G20260.1 | 83.795 | 469 | 51 | 6 | 143 | 586 | 17 | 485 | 0.0 | 774 |
| Msa1426820 | AT1G76030.1 | 83.019 | 477 | 57 | 6 | 134 | 586 | 8 | 484 | 0.0 | 772 |
| Msa1426820 | AT5G08690.1 | 27.714 | 350 | 224 | 8 | 197 | 527 | 138 | 477 | 2.02e-23 | 104 |
| Msa1426820 | AT5G08670.1 | 27.714 | 350 | 224 | 8 | 197 | 527 | 138 | 477 | 2.19e-23 | 104 |
| Msa1426820 | AT5G08680.1 | 27.714 | 350 | 224 | 8 | 197 | 527 | 141 | 480 | 2.80e-23 | 104 |
| Msa1426820 | ATMG01190.1 | 27.019 | 322 | 215 | 7 | 181 | 484 | 62 | 381 | 5.25e-22 | 100 |
| Msa1426820 | AT2G07698.1 | 27.103 | 321 | 214 | 7 | 182 | 484 | 333 | 651 | 1.54e-21 | 99.8 |
| Msa1426820 | ATCG00120.1 | 27.451 | 357 | 207 | 11 | 169 | 484 | 26 | 371 | 2.44e-21 | 98.2 |
| Msa1426820 | ATCG00480.1 | 26.934 | 349 | 221 | 8 | 200 | 527 | 82 | 417 | 9.87e-21 | 96.3 |
| Msa1426820 | AT1G79940.2 | 60.494 | 81 | 27 | 2 | 43 | 118 | 264 | 344 | 8.70e-18 | 87.8 |
| Msa1426820 | AT1G79940.3 | 60.494 | 81 | 27 | 2 | 43 | 118 | 264 | 344 | 8.70e-18 | 87.8 |
| Msa1426820 | AT1G79940.1 | 60.494 | 81 | 27 | 2 | 43 | 118 | 264 | 344 | 8.70e-18 | 87.8 |
| Msa1426820 | AT1G79940.4 | 60.494 | 81 | 27 | 2 | 43 | 118 | 264 | 344 | 9.47e-18 | 87.4 |
| Msa1426820 | AT1G78900.1 | 28.351 | 194 | 128 | 4 | 342 | 527 | 318 | 508 | 2.78e-14 | 76.3 |
| Msa1426820 | AT1G78900.2 | 28.351 | 194 | 128 | 4 | 342 | 527 | 318 | 508 | 2.78e-14 | 76.3 |
| Msa1426820 | AT4G21180.2 | 49.451 | 91 | 37 | 2 | 33 | 118 | 178 | 264 | 3.18e-13 | 72.8 |
| Msa1426820 | AT4G21180.1 | 49.451 | 91 | 37 | 2 | 33 | 118 | 258 | 344 | 4.05e-13 | 72.8 |
Find 140 sgRNAs with CRISPR-Local
Find 609 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGACAATCTCTTGATATT+TGG | 0.086118 | tig0026076:+20842 | Msa1426820:intergenic |
| GCATGGTTAGAATTGGAATT+TGG | 0.112862 | tig0026076:+17233 | Msa1426820:intergenic |
| CCTCTTGGTCGTGCTTATTT+TGG | 0.178155 | tig0026076:-21796 | Msa1426820:CDS |
| TCTTACTACTGCTGAATATC+TGG | 0.262357 | tig0026076:-17672 | Msa1426820:CDS |
| TTGACAATCTCTTGATATTT+GGG | 0.268902 | tig0026076:+20843 | Msa1426820:intergenic |
| TTTACGACCGTACAGTTTAC+TGG | 0.269439 | tig0026076:-20477 | Msa1426820:CDS |
| GGGCGGATATTTAACGGTTC+TGG | 0.291085 | tig0026076:-19361 | Msa1426820:CDS |
| AAGTAAGCCTCGAGTAAAAT+TGG | 0.302617 | tig0026076:+19334 | Msa1426820:intergenic |
| CATGGTTAGAATTGGAATTT+GGG | 0.316289 | tig0026076:+17234 | Msa1426820:intergenic |
| CCAGGATAACCACGTCTTCC+TGG | 0.316708 | tig0026076:+17328 | Msa1426820:intergenic |
| AGCAAGAGCAGACCAAGTTT+TGG | 0.325497 | tig0026076:-22919 | Msa1426820:CDS |
| TCACCACTGCAGAGTGCTAT+TGG | 0.329482 | tig0026076:-16319 | Msa1426820:intron |
| TCATTTGGCATGGTTAGAAT+TGG | 0.334129 | tig0026076:+17226 | Msa1426820:intergenic |
| CACCACTGCAGAGTGCTATT+GGG | 0.340834 | tig0026076:-16318 | Msa1426820:intron |
| CAGGTATTTGAAGGTACATC+TGG | 0.345618 | tig0026076:-20513 | Msa1426820:CDS |
| GAGATTGTCAATATTCGTTT+AGG | 0.348480 | tig0026076:-20831 | Msa1426820:CDS |
| CTGTCCCTCCGTAATATATC+TGG | 0.348917 | tig0026076:+17080 | Msa1426820:intergenic |
| CTGTGCAGCAATTTCATTAT+GGG | 0.352240 | tig0026076:+19081 | Msa1426820:intergenic |
| TCTGTGCAGCAATTTCATTA+TGG | 0.352813 | tig0026076:+19080 | Msa1426820:intergenic |
| ATTACTTCATTACCATCATT+TGG | 0.354095 | tig0026076:+17211 | Msa1426820:intergenic |
| CAGCATCTCGGCTGTAAAAC+TGG | 0.358949 | tig0026076:+15794 | Msa1426820:intergenic |
| ATGACTGTGTCTGGAGTTAC+CGG | 0.376731 | tig0026076:-20999 | Msa1426820:CDS |
| GAGGCTTACTTGGATATATC+AGG | 0.402927 | tig0026076:-19322 | Msa1426820:intron |
| GGTCATTCTTGAGAAAGTTA+AGG | 0.412036 | tig0026076:-20970 | Msa1426820:intron |
| TGCTGCACAGATTTGTCGTC+AGG | 0.414638 | tig0026076:-19068 | Msa1426820:CDS |
| TGGCGAAAAGGCTGTTGTTC+AGG | 0.415818 | tig0026076:-20769 | Msa1426820:intron |
| TTTACGCCCCTCAATTCTTC+CGG | 0.416790 | tig0026076:+17267 | Msa1426820:intergenic |
| CAACGACAGCTTTCATTGCC+TGG | 0.422877 | tig0026076:+16107 | Msa1426820:intergenic |
| CTTCATTAATACCCACTTCA+AGG | 0.424318 | tig0026076:+15998 | Msa1426820:intergenic |
| TCTTCCTGGCACCTCTTCTC+TGG | 0.425819 | tig0026076:+17342 | Msa1426820:intergenic |
| CACGATGCTCTTCCAAAACT+TGG | 0.428314 | tig0026076:+22907 | Msa1426820:intergenic |
| TAGAGACTGGAATATATTGC+AGG | 0.434624 | tig0026076:+15888 | Msa1426820:intergenic |
| ATGAAATCACTTGCAAAAGA+TGG | 0.438991 | tig0026076:+22704 | Msa1426820:intergenic |
| CTGTATCATTGGACATGCTT+GGG | 0.442480 | tig0026076:-19381 | Msa1426820:CDS |
| ATGCTTGGGCGGATATTTAA+CGG | 0.445195 | tig0026076:-19367 | Msa1426820:CDS |
| CCAAGCATGTCCAATGATAC+AGG | 0.451792 | tig0026076:+19382 | Msa1426820:intergenic |
| GAAGTACACGAGGGAAAATC+CGG | 0.454247 | tig0026076:+15845 | Msa1426820:intergenic |
| TGATCTTACCAGATATATTA+CGG | 0.458091 | tig0026076:-17088 | Msa1426820:CDS |
| GTGATGATACGTTCGATTGT+AGG | 0.458361 | tig0026076:+17707 | Msa1426820:intergenic |
| CCAGGAAGACGTGGTTATCC+TGG | 0.466984 | tig0026076:-17328 | Msa1426820:CDS |
| CCTGTATCATTGGACATGCT+TGG | 0.467212 | tig0026076:-19382 | Msa1426820:CDS |
| GTCAATATTCGTTTAGGCGA+TGG | 0.473500 | tig0026076:-20825 | Msa1426820:CDS |
| AGACCGGCAGCTGAAAATAG+AGG | 0.475986 | tig0026076:+19106 | Msa1426820:intergenic |
| TGAACATGCCGGAAGAATTG+AGG | 0.476429 | tig0026076:-17275 | Msa1426820:CDS |
| CTCGAGAACTTGTCCATGCC+GGG | 0.477725 | tig0026076:+20797 | Msa1426820:intergenic |
| CACTTGCAAAAGATGGAGAC+AGG | 0.478454 | tig0026076:+22711 | Msa1426820:intergenic |
| GGACAAGTTCTCGAGATTGA+TGG | 0.478592 | tig0026076:-20789 | Msa1426820:CDS |
| GCACAGATTTGTCGTCAGGC+TGG | 0.482424 | tig0026076:-19064 | Msa1426820:CDS |
| ACTATTGATCAGGTATTTGA+AGG | 0.488267 | tig0026076:-20522 | Msa1426820:intron |
| GCTCTTGCTTAATGTTCTTG+AGG | 0.496316 | tig0026076:+22933 | Msa1426820:intergenic |
| ACAGAATACATGACTGTGTC+TGG | 0.496594 | tig0026076:-21008 | Msa1426820:intron |
| CCAGTCTGTATCATCTCCTC+AGG | 0.497280 | tig0026076:+19178 | Msa1426820:intergenic |
| TCAGGATAGGTTCTATCACT+AGG | 0.497405 | tig0026076:+19196 | Msa1426820:intergenic |
| GTAATATATCTGGTAAGATC+AGG | 0.498299 | tig0026076:+17090 | Msa1426820:intergenic |
| GCTGCCAGAGAAGAGGTGCC+AGG | 0.506143 | tig0026076:-17346 | Msa1426820:CDS |
| GAACATGCCGGAAGAATTGA+GGG | 0.507410 | tig0026076:-17274 | Msa1426820:CDS |
| CTCAAGAATGACCAATGGTC+CGG | 0.512187 | tig0026076:+20980 | Msa1426820:intergenic |
| TCTCGAGAACTTGTCCATGC+CGG | 0.512745 | tig0026076:+20796 | Msa1426820:intergenic |
| ATGTTCTTCCATCACTATCT+CGG | 0.513623 | tig0026076:-16451 | Msa1426820:CDS |
| ATGCAGGCGAGGTGCTGTCT+CGG | 0.514779 | tig0026076:+22673 | Msa1426820:intergenic |
| TCCATGCAAGATCTAGAGAC+TGG | 0.515422 | tig0026076:+15875 | Msa1426820:intergenic |
| TGCAGCTATGGGAGTTAACA+TGG | 0.517732 | tig0026076:-18401 | Msa1426820:CDS |
| AGAGCTTGGTGTAGTCCTCT+TGG | 0.517761 | tig0026076:-21811 | Msa1426820:CDS |
| TGCCATTGGAAAGGATGTCC+AGG | 0.518353 | tig0026076:-16125 | Msa1426820:CDS |
| ATCACTATCTCGGTTGATGA+AGG | 0.519694 | tig0026076:-16441 | Msa1426820:intron |
| ATCTTGCATGGACTTTACTC+CGG | 0.519977 | tig0026076:-15864 | Msa1426820:CDS |
| ATTCTAACCATGCCAAATGA+TGG | 0.521293 | tig0026076:-17223 | Msa1426820:intron |
| GTCTGGAGTTACCGGACCAT+TGG | 0.521668 | tig0026076:-20991 | Msa1426820:CDS |
| GGTTCTATCACTAGGGTTGA+CGG | 0.522874 | tig0026076:+19204 | Msa1426820:intergenic |
| TCTCGAGATTGATGGCGAAA+AGG | 0.527436 | tig0026076:-20781 | Msa1426820:CDS |
| GTAAAACTGGTCAAGAGTCT+TGG | 0.529021 | tig0026076:+15807 | Msa1426820:intergenic |
| TGGGGAGGGAATGACTAGAA+AGG | 0.531100 | tig0026076:-16299 | Msa1426820:CDS |
| CCTTCATTAGCTCTTCATGC+AGG | 0.532164 | tig0026076:+22657 | Msa1426820:intergenic |
| GAATATATTGCAGGTGTCGT+AGG | 0.532438 | tig0026076:+15897 | Msa1426820:intergenic |
| TTCATTACCATCATTTGGCA+TGG | 0.532782 | tig0026076:+17216 | Msa1426820:intergenic |
| GTGCAACATACATTTAACCT+TGG | 0.533755 | tig0026076:-21751 | Msa1426820:intron |
| TGTCACGTCTTCTGATTCTC+CGG | 0.535001 | tig0026076:-24920 | Msa1426820:intron |
| CTGTATGCAACTTATGCCAT+TGG | 0.536747 | tig0026076:-16139 | Msa1426820:CDS |
| AGCACTTTCATCTGAGGACC+TGG | 0.537514 | tig0026076:-16077 | Msa1426820:CDS |
| TAGGCAGTTGCATAATAGAC+AGG | 0.544818 | tig0026076:-17046 | Msa1426820:intron |
| TCCAGTCTCTAGATCTTGCA+TGG | 0.545696 | tig0026076:-15876 | Msa1426820:CDS |
| CTGTATCATCTCCTCAGGAT+AGG | 0.550371 | tig0026076:+19183 | Msa1426820:intergenic |
| ATCATCAATTACCAGCATCT+CGG | 0.552362 | tig0026076:+15782 | Msa1426820:intergenic |
| AGTGATGGAAGAACATTGAT+TGG | 0.552550 | tig0026076:+16458 | Msa1426820:intergenic |
| AACTGGTCAAGAGTCTTGGC+TGG | 0.554684 | tig0026076:+15811 | Msa1426820:intergenic |
| GGAAGAATTGAGGGGCGTAA+AGG | 0.556865 | tig0026076:-17265 | Msa1426820:CDS |
| CCTGAGGAGATGATACAGAC+TGG | 0.558233 | tig0026076:-19178 | Msa1426820:CDS |
| AGAGAAAATTAGTAGATGCC+AGG | 0.561602 | tig0026076:+16059 | Msa1426820:intergenic |
| ACCACTGCAGAGTGCTATTG+GGG | 0.563672 | tig0026076:-16317 | Msa1426820:intron |
| TGCCTGGACATCCTTTCCAA+TGG | 0.569487 | tig0026076:+16123 | Msa1426820:intergenic |
| TAGTGAAATTGTCCTTGAAG+TGG | 0.569681 | tig0026076:-16010 | Msa1426820:CDS |
| CTGCAGAGTGCTATTGGGGA+GGG | 0.572458 | tig0026076:-16313 | Msa1426820:intron |
| GGCGATGGAACTACCCGGCA+TGG | 0.573515 | tig0026076:-20810 | Msa1426820:CDS |
| GCAACAATTTATGAACATGC+CGG | 0.577220 | tig0026076:-17286 | Msa1426820:CDS |
| CAGGCAATGAAAGCTGTCGT+TGG | 0.577939 | tig0026076:-16106 | Msa1426820:CDS |
| TGTGCAGCAATTTCATTATG+GGG | 0.578028 | tig0026076:+19082 | Msa1426820:intergenic |
| TCATTCTGATGTGTCCAACC+AGG | 0.578586 | tig0026076:-16275 | Msa1426820:intron |
| CAGGATAGGTTCTATCACTA+GGG | 0.584904 | tig0026076:+19197 | Msa1426820:intergenic |
| AAGAAAACGACGGGATTGAG+AGG | 0.586955 | tig0026076:+24957 | Msa1426820:intergenic |
| TCGATTGAGAAGAAAACGAC+GGG | 0.590073 | tig0026076:+24948 | Msa1426820:intergenic |
| ACATGGAAATTCCAGTTCGA+AGG | 0.590375 | tig0026076:-23007 | Msa1426820:intron |
| GAATATCTGGCTTATGAATG+TGG | 0.590666 | tig0026076:-17659 | Msa1426820:CDS |
| AACATAATAAGCTTCTGAAG+AGG | 0.600221 | tig0026076:+22980 | Msa1426820:intergenic |
| AGTGAAATTGTCCTTGAAGT+GGG | 0.600879 | tig0026076:-16009 | Msa1426820:intron |
| ATGGAAGAACATTGATTGGT+GGG | 0.602705 | tig0026076:+16462 | Msa1426820:intergenic |
| AGGTATTTGAAGGTACATCT+GGG | 0.603787 | tig0026076:-20512 | Msa1426820:CDS |
| AGGGACAGATATACATCGAT+AGG | 0.603945 | tig0026076:-17065 | Msa1426820:CDS |
| CCTGCATGAAGAGCTAATGA+AGG | 0.605404 | tig0026076:-22657 | Msa1426820:intron |
| ATTAGCTCTTCATGCAGGCG+AGG | 0.608084 | tig0026076:+22662 | Msa1426820:intergenic |
| TATCATTGGACATGCTTGGG+CGG | 0.609865 | tig0026076:-19378 | Msa1426820:CDS |
| TATCTGGTAAGATCAGGAGT+TGG | 0.610819 | tig0026076:+17096 | Msa1426820:intergenic |
| TTCATCAACCGAGATAGTGA+TGG | 0.612897 | tig0026076:+16443 | Msa1426820:intergenic |
| AGAAGAAGCACTTTCATCTG+AGG | 0.617772 | tig0026076:-16083 | Msa1426820:CDS |
| TTATGCTGATGCTCTTCGTG+AGG | 0.621125 | tig0026076:-17600 | Msa1426820:intron |
| CCAAAATAAGCACGACCAAG+AGG | 0.622212 | tig0026076:+21796 | Msa1426820:intergenic |
| GTCATGAATTCTATTGCTAG+AGG | 0.622259 | tig0026076:-19139 | Msa1426820:CDS |
| GGTATCTGCTGCCAGAGAAG+AGG | 0.624465 | tig0026076:-17353 | Msa1426820:CDS |
| GAAGAGGTGCCAGGAAGACG+TGG | 0.628045 | tig0026076:-17337 | Msa1426820:CDS |
| GACCGTACAGTTTACTGGAG+AGG | 0.629013 | tig0026076:-20472 | Msa1426820:intron |
| GTGCAGCAATTTCATTATGG+GGG | 0.632413 | tig0026076:+19083 | Msa1426820:intergenic |
| TACCTCTCCAGTAAACTGTA+CGG | 0.633139 | tig0026076:+20470 | Msa1426820:intergenic |
| GATGGAAGAACATTGATTGG+TGG | 0.633609 | tig0026076:+16461 | Msa1426820:intergenic |
| ACTGCAGAGTGCTATTGGGG+AGG | 0.635578 | tig0026076:-16314 | Msa1426820:intron |
| GACCGGCAGCTGAAAATAGA+GGG | 0.638267 | tig0026076:+19107 | Msa1426820:intergenic |
| ACTTTCTCAAGAATGACCAA+TGG | 0.645136 | tig0026076:+20975 | Msa1426820:intergenic |
| GAAGTCTGATAATCTTCTTG+AGG | 0.648163 | tig0026076:-19023 | Msa1426820:intron |
| TGCAACTTATGCCATTGGAA+AGG | 0.655175 | tig0026076:-16134 | Msa1426820:CDS |
| CTTACCAGATATATTACGGA+GGG | 0.659583 | tig0026076:-17084 | Msa1426820:CDS |
| AGATCTGTATACATATAACC+AGG | 0.661413 | tig0026076:+17310 | Msa1426820:intergenic |
| CAAACAAGAAGAGACCTGGT+TGG | 0.666933 | tig0026076:+16261 | Msa1426820:intergenic |
| GTTTAGGCGATGGAACTACC+CGG | 0.678023 | tig0026076:-20815 | Msa1426820:CDS |
| CTCGATTGAGAAGAAAACGA+CGG | 0.679795 | tig0026076:+24947 | Msa1426820:intergenic |
| GAGGTTGATGAAGAAGACGA+CGG | 0.681666 | tig0026076:+24976 | Msa1426820:intergenic |
| ACTTGCAAAAGATGGAGACA+GGG | 0.688727 | tig0026076:+22712 | Msa1426820:intergenic |
| TAGTGATAGAACCTATCCTG+AGG | 0.709001 | tig0026076:-19194 | Msa1426820:CDS |
| TCTTACCAGATATATTACGG+AGG | 0.728933 | tig0026076:-17085 | Msa1426820:CDS |
| ATACGATGAAGAAGTACACG+AGG | 0.729276 | tig0026076:+15835 | Msa1426820:intergenic |
| GCAGTAGTAAGAGCAATACG+AGG | 0.737884 | tig0026076:+17683 | Msa1426820:intergenic |
| TACGATGAAGAAGTACACGA+GGG | 0.742809 | tig0026076:+15836 | Msa1426820:intergenic |
| AACATGCCGGAAGAATTGAG+GGG | 0.764342 | tig0026076:-17273 | Msa1426820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAATGAAAATATGTAT+TGG | + | tig0026076:15825-15844 | Msa0045380:intergenic | 10.0% |
| !!! | ATATTTTAATTGAGAAAATT+GGG | - | tig0026076:16904-16923 | Msa1426820:intron | 10.0% |
| !!! | TTTATATGATATGTTTTAAT+AGG | - | tig0026076:19022-19041 | Msa1426820:intron | 10.0% |
| !! | AAAAAAAATGTATCTTAAAT+CGG | - | tig0026076:20206-20225 | Msa1426820:intron | 10.0% |
| !!! | TAATATATTTCTAATTATTC+AGG | - | tig0026076:22226-22245 | Msa1426820:intron | 10.0% |
| !!! | ATTATAATTTTTTTAACAAG+GGG | + | tig0026076:23645-23664 | Msa1426820:intergenic | 10.0% |
| !!! | CATTATAATTTTTTTAACAA+GGG | + | tig0026076:23646-23665 | Msa1426820:intergenic | 10.0% |
| !!! | TCATTATAATTTTTTTAACA+AGG | + | tig0026076:23647-23666 | Msa1426820:intergenic | 10.0% |
| !!! | TTTTTTTACTTAAGCTTTAA+AGG | - | tig0026076:15920-15939 | Msa1426820:intron | 15.0% |
| !!! | TATCTCAATATATTTTGATT+TGG | - | tig0026076:16602-16621 | Msa1426820:intron | 15.0% |
| !!! | CATATTTTAATTGAGAAAAT+TGG | - | tig0026076:16903-16922 | Msa1426820:intron | 15.0% |
| !!! | AAATATTTTGAATTCGATTT+GGG | + | tig0026076:17062-17081 | Msa1426820:intergenic | 15.0% |
| !!! | AAAATATTTTGAATTCGATT+TGG | + | tig0026076:17063-17082 | Msa1426820:intergenic | 15.0% |
| !!! | TTTTAATTTTCTGTTTACTT+TGG | - | tig0026076:17408-17427 | Msa1426820:intron | 15.0% |
| !! | CAAAAAAAGAATACATTATT+TGG | + | tig0026076:18613-18632 | Msa1426820:intergenic | 15.0% |
| !!! | TATTTTACTTATTGAAAAAC+TGG | - | tig0026076:18921-18940 | Msa1426820:intron | 15.0% |
| !!! | ATTTTACTTATTGAAAAACT+GGG | - | tig0026076:18922-18941 | Msa1426820:intron | 15.0% |
| !!! | AAACTACATAAATTTAAAGT+AGG | - | tig0026076:18957-18976 | Msa1426820:intron | 15.0% |
| !! | TGATAATCTTAATTTAAATG+TGG | + | tig0026076:19116-19135 | Msa1426820:intergenic | 15.0% |
| !! | TGTAAATCTATTGATATATT+GGG | - | tig0026076:19896-19915 | Msa1426820:intron | 15.0% |
| !!! | TAAACAGCATATATTTTTAT+GGG | + | tig0026076:21096-21115 | Msa1426820:intergenic | 15.0% |
| !!! | ATAAACAGCATATATTTTTA+TGG | + | tig0026076:21097-21116 | Msa1426820:intergenic | 15.0% |
| !!! | TTTAACTTGAAATTTTGTAT+TGG | - | tig0026076:21403-21422 | Msa1426820:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | tig0026076:21657-21676 | Msa1426820:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | tig0026076:21656-21675 | Msa1426820:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | tig0026076:21680-21699 | Msa1426820:intron | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | tig0026076:21783-21802 | Msa1426820:CDS | 15.0% |
| !!! | TTTTAAAGATTACCAAATTA+AGG | + | tig0026076:23147-23166 | Msa1426820:intergenic | 15.0% |
| !!! | AATTTTCTAAAAACGTTAAA+TGG | - | tig0026076:23515-23534 | Msa1426820:intron | 15.0% |
| !!! | TACTTCAATATTTTGTTTAA+TGG | - | tig0026076:23564-23583 | Msa1426820:intron | 15.0% |
| !!! | TTATAATTTTTTTAACAAGG+GGG | + | tig0026076:23644-23663 | Msa1426820:intergenic | 15.0% |
| !! | GGTTAAGAAATAAAAATTAT+CGG | + | tig0026076:23678-23697 | Msa1426820:intergenic | 15.0% |
| !!! | AGTAAATTTTGCTTATATTT+TGG | + | tig0026076:24557-24576 | Msa1426820:intergenic | 15.0% |
| !!! | ATAAGCAAAATTTACTTTTT+AGG | - | tig0026076:24561-24580 | Msa1426820:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | tig0026076:24659-24678 | Msa1426820:intron | 15.0% |
| !! | ACATATATTTCTTAATCAAA+AGG | - | tig0026076:25083-25102 | Msa1426820:intron | 15.0% |
| !! | TTATATGTAAACTATCTTAT+TGG | - | tig0026076:25242-25261 | Msa1426820:intron | 15.0% |
| !!! | ATTTTCCTCAATATTATTAA+CGG | - | tig0026076:25486-25505 | Msa1426820:intron | 15.0% |
| !! | AGTATCTCAAAAACAAAAAT+AGG | + | tig0026076:16015-16034 | Msa1426820:intergenic | 20.0% |
| !! | TCAACTAAAATACAAACTAT+CGG | + | tig0026076:16082-16101 | Msa1426820:intergenic | 20.0% |
| !! | AAATTGTTAAAGTGTAAAGT+GGG | + | tig0026076:16284-16303 | Msa1426820:intergenic | 20.0% |
| !!! | AATATTTTGAATTCGATTTG+GGG | + | tig0026076:17061-17080 | Msa1426820:intergenic | 20.0% |
| !! | AATATACACCATATATGAAT+CGG | + | tig0026076:17312-17331 | Msa1426820:intergenic | 20.0% |
| !! | TTCATATATGGTGTATATTT+AGG | - | tig0026076:17313-17332 | Msa1426820:CDS | 20.0% |
| !!! | ACTTATTGTTAAGGAAATTT+TGG | - | tig0026076:17479-17498 | Msa1426820:intron | 20.0% |
| !! | TTAGATGTAATCATCATTAA+AGG | - | tig0026076:17666-17685 | Msa1426820:CDS | 20.0% |
| !! | TAGATGTAATCATCATTAAA+GGG | - | tig0026076:17667-17686 | Msa1426820:CDS | 20.0% |
| !! | TTGATTCATTTAGTATTCTT+TGG | - | tig0026076:18345-18364 | Msa1426820:intron | 20.0% |
| !!! | ATCAATTTATTTCAAGTAGT+TGG | - | tig0026076:19867-19886 | Msa1426820:intron | 20.0% |
| !! | GTGTAAATCTATTGATATAT+TGG | - | tig0026076:19895-19914 | Msa1426820:intron | 20.0% |
| !! | AAGTTTGAACACATTTAAAA+AGG | + | tig0026076:20292-20311 | Msa1426820:intergenic | 20.0% |
| !! | AATAAAGAGACACATAATTT+AGG | + | tig0026076:20424-20443 | Msa1426820:intergenic | 20.0% |
| !! | AGTTAAAATTTAGTCACAAA+GGG | + | tig0026076:20575-20594 | Msa1426820:intergenic | 20.0% |
| !! | AAGTTAAAATTTAGTCACAA+AGG | + | tig0026076:20576-20595 | Msa1426820:intergenic | 20.0% |
| !!! | TTGTGACTAAATTTTAACTT+CGG | - | tig0026076:20576-20595 | Msa1426820:intron | 20.0% |
| !! | AAACTATAAAATGACGTTAA+AGG | + | tig0026076:20901-20920 | Msa1426820:intergenic | 20.0% |
| !! | CTTTATAATAACTATTGATC+AGG | - | tig0026076:20926-20945 | Msa1426820:intron | 20.0% |
| !! | TAACAGTTAATGCATTATTT+AGG | + | tig0026076:21152-21171 | Msa1426820:intergenic | 20.0% |
| !! | TATCTTCTTTATCATTATCT+GGG | + | tig0026076:21266-21285 | Msa1426820:intergenic | 20.0% |
| !! | TTATCTTCTTTATCATTATC+TGG | + | tig0026076:21267-21286 | Msa1426820:intergenic | 20.0% |
| !! | TAAATTCTGCTTAGAAAAAA+GGG | - | tig0026076:21481-21500 | Msa1426820:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | tig0026076:21623-21642 | Msa1426820:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | tig0026076:21666-21685 | Msa1426820:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | tig0026076:21743-21762 | Msa1426820:intron | 20.0% |
| !! | TAAAAGTTCTTCCTTTAAAT+TGG | - | tig0026076:21945-21964 | Msa1426820:intron | 20.0% |
| !! | TAAAAGCAAAATGTTAAAGA+AGG | + | tig0026076:21980-21999 | Msa1426820:intergenic | 20.0% |
| !! | GAAAAGAAATATTATCAGAT+AGG | - | tig0026076:22607-22626 | Msa1426820:intron | 20.0% |
| !! | AAATATTATCAGATAGGAAA+GGG | - | tig0026076:22613-22632 | Msa1426820:intron | 20.0% |
| !! | TACTCATATTACATAAAGTA+TGG | + | tig0026076:22969-22988 | Msa1426820:intergenic | 20.0% |
| !! | TACTTTATGTAATATGAGTA+AGG | - | tig0026076:22969-22988 | Msa1426820:CDS | 20.0% |
| !!! | TTTGATTCTTCATTTTTCTT+TGG | - | tig0026076:23323-23342 | Msa1426820:intron | 20.0% |
| !!! | TTGATTCTTCATTTTTCTTT+GGG | - | tig0026076:23324-23343 | Msa1426820:intron | 20.0% |
| !! | TAAGAAATAAAAATTATCGG+AGG | + | tig0026076:23675-23694 | Msa1426820:intergenic | 20.0% |
| !!! | TTTTCCTAATAAATTACAGT+TGG | + | tig0026076:23891-23910 | Msa1426820:intergenic | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | + | tig0026076:24650-24669 | Msa1426820:intergenic | 20.0% |
| !! | ATATAAAAGCAGTTAATTGT+TGG | - | tig0026076:24711-24730 | Msa1426820:intron | 20.0% |
| !! | TAAAAAAAGAAAACTACACA+GGG | + | tig0026076:25225-25244 | Msa1426820:intergenic | 20.0% |
| !! | ATAAAAAAAGAAAACTACAC+AGG | + | tig0026076:25226-25245 | Msa1426820:intergenic | 20.0% |
| ! | AACTAAAATACAAACTATCG+GGG | + | tig0026076:16080-16099 | Msa1426820:intergenic | 25.0% |
| ! | CAACTAAAATACAAACTATC+GGG | + | tig0026076:16081-16100 | Msa1426820:intergenic | 25.0% |
| ! | AAGATGACTAAAAGTGAATT+GGG | + | tig0026076:16116-16135 | Msa1426820:intergenic | 25.0% |
| ! | AAAGATGACTAAAAGTGAAT+TGG | + | tig0026076:16117-16136 | Msa1426820:intergenic | 25.0% |
| !!! | AGATCTTTTTGGCAAAATTA+GGG | + | tig0026076:16214-16233 | Msa1426820:intergenic | 25.0% |
| !!! | AAGATCTTTTTGGCAAAATT+AGG | + | tig0026076:16215-16234 | Msa1426820:intergenic | 25.0% |
| ! | CAAATTGTTAAAGTGTAAAG+TGG | + | tig0026076:16285-16304 | Msa1426820:intergenic | 25.0% |
| ! | CACTTTACACTTTAACAATT+TGG | - | tig0026076:16283-16302 | Msa1426820:CDS | 25.0% |
| !!! | GTTAATAAGATGGTTTTAGT+TGG | + | tig0026076:16367-16386 | Msa1426820:intergenic | 25.0% |
| ! | TTAATTGAGAAAATTGGGTT+TGG | - | tig0026076:16909-16928 | Msa1426820:intron | 25.0% |
| !!! | TTTTAATTTTTGTGCTGAAG+TGG | - | tig0026076:16953-16972 | Msa1426820:intron | 25.0% |
| ! | AATAAACAAAAGGAAGAAAG+AGG | + | tig0026076:17388-17407 | Msa1426820:intergenic | 25.0% |
| ! | GGATGATATACTTATTGTTA+AGG | - | tig0026076:17470-17489 | Msa1426820:intron | 25.0% |
| ! | AATTAGATATCAGTTGCTAA+AGG | - | tig0026076:17567-17586 | Msa1426820:intron | 25.0% |
| ! | ATTCCTAGATATGAGAAAAT+GGG | + | tig0026076:17606-17625 | Msa1426820:intergenic | 25.0% |
| ! | TATTCCTAGATATGAGAAAA+TGG | + | tig0026076:17607-17626 | Msa1426820:intergenic | 25.0% |
| ! | TTCCACAGATTTCAAATAAT+AGG | + | tig0026076:17641-17660 | Msa1426820:intergenic | 25.0% |
| ! | TTCATGTTTGTTCTTTAGTT+TGG | - | tig0026076:17833-17852 | Msa1426820:intron | 25.0% |
| !! | AGATTGATACAAGAGTATAA+TGG | + | tig0026076:17990-18009 | Msa1426820:intergenic | 25.0% |
| ! | TTGAGATTCATATAACCTAA+GGG | + | tig0026076:18077-18096 | Msa1426820:intergenic | 25.0% |
| ! | ATTGAGATTCATATAACCTA+AGG | + | tig0026076:18078-18097 | Msa1426820:intergenic | 25.0% |
| ! | TGATAGTTTACATACTGAAT+GGG | - | tig0026076:18101-18120 | Msa1426820:intron | 25.0% |
| !! | TATGCATAATATTTTGTCAC+AGG | - | tig0026076:18125-18144 | Msa1426820:intron | 25.0% |
| !! | ATGCATAATATTTTGTCACA+GGG | - | tig0026076:18126-18145 | Msa1426820:intron | 25.0% |
| !!! | AATTCCTGCTAAATTTTGAT+GGG | - | tig0026076:18175-18194 | Msa1426820:intron | 25.0% |
| ! | TTACACATAGAATATACAGA+GGG | + | tig0026076:18308-18327 | Msa1426820:intergenic | 25.0% |
| ! | ATTACACATAGAATATACAG+AGG | + | tig0026076:18309-18328 | Msa1426820:intergenic | 25.0% |
| ! | TATTATGTTCAACAAAGTCA+TGG | - | tig0026076:18404-18423 | Msa1426820:CDS | 25.0% |
| !!! | CACAAAATTTGTTGAATACA+TGG | - | tig0026076:18434-18453 | Msa1426820:CDS | 25.0% |
| ! | TCTAAACGAAAATATCATAG+GGG | + | tig0026076:18682-18701 | Msa1426820:intergenic | 25.0% |
| ! | GTCTAAACGAAAATATCATA+GGG | + | tig0026076:18683-18702 | Msa1426820:intergenic | 25.0% |
| ! | TGTCTAAACGAAAATATCAT+AGG | + | tig0026076:18684-18703 | Msa1426820:intergenic | 25.0% |
| ! | ATCGAATCTAATCTATCAAA+AGG | + | tig0026076:18852-18871 | Msa1426820:intergenic | 25.0% |
| ! | ATACTTAACAGTAAGATGAA+CGG | + | tig0026076:18896-18915 | Msa1426820:intergenic | 25.0% |
| ! | CATGAAATATATAAAGAGAC+TGG | + | tig0026076:19244-19263 | Msa1426820:intergenic | 25.0% |
| ! | AAAGAAATTGTTGTAGATGA+AGG | + | tig0026076:19355-19374 | Msa1426820:intergenic | 25.0% |
| !! | TATGATTTTTCTCTGAACTT+TGG | - | tig0026076:19477-19496 | Msa1426820:intron | 25.0% |
| !! | TCATTGACTAGTAAATTGAA+AGG | + | tig0026076:19532-19551 | Msa1426820:intergenic | 25.0% |
| ! | TCTTTATTACTGTTTGTTCT+TGG | - | tig0026076:19566-19585 | Msa1426820:intron | 25.0% |
| ! | AACAAGTTGTTTAATAGCAT+TGG | - | tig0026076:19841-19860 | Msa1426820:intron | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | tig0026076:20122-20141 | Msa1426820:intergenic | 25.0% |
| !!! | TAGGCAACTTTTTACTTTTT+AGG | + | tig0026076:20147-20166 | Msa1426820:intergenic | 25.0% |
| !!! | GATACATTTTTTTTTTTCCC+TGG | + | tig0026076:20200-20219 | Msa1426820:intergenic | 25.0% |
| !! | AAAATCACACATTTTAGATC+AGG | + | tig0026076:20236-20255 | Msa1426820:intergenic | 25.0% |
| ! | AATACCATAAGTTATCAACA+CGG | + | tig0026076:20377-20396 | Msa1426820:intergenic | 25.0% |
| ! | TTGACAATCTCTTGATATTT+GGG | + | tig0026076:20618-20637 | Msa1426820:intergenic | 25.0% |
| ! | ATTGACAATCTCTTGATATT+TGG | + | tig0026076:20619-20638 | Msa1426820:intergenic | 25.0% |
| ! | AATCTTATTATGCATGCTTA+AGG | + | tig0026076:20721-20740 | Msa1426820:intergenic | 25.0% |
| ! | TGTCTTATCTCAATGAAATT+TGG | - | tig0026076:21117-21136 | Msa1426820:intron | 25.0% |
| ! | CTAAATTCTGCTTAGAAAAA+AGG | - | tig0026076:21480-21499 | Msa1426820:intron | 25.0% |
| ! | AAATTCTGCTTAGAAAAAAG+GGG | - | tig0026076:21482-21501 | Msa1426820:intron | 25.0% |
| ! | TTGAAATTCTAGTAATCACA+TGG | - | tig0026076:21520-21539 | Msa1426820:intron | 25.0% |
| ! | TCAATTCAATAACCAATACT+TGG | + | tig0026076:21923-21942 | Msa1426820:intergenic | 25.0% |
| !!! | TTCCTTTAAATTGGTTTTCT+TGG | - | tig0026076:21954-21973 | Msa1426820:intron | 25.0% |
| !!! | ACATTTTGCTTTTACTATAG+TGG | - | tig0026076:21986-22005 | Msa1426820:intron | 25.0% |
| !! | TGGATTTTTCTTATTGATGA+TGG | - | tig0026076:22580-22599 | Msa1426820:intron | 25.0% |
| ! | GAAATATTATCAGATAGGAA+AGG | - | tig0026076:22612-22631 | Msa1426820:intron | 25.0% |
| ! | AATATTATCAGATAGGAAAG+GGG | - | tig0026076:22614-22633 | Msa1426820:intron | 25.0% |
| ! | ATAATGATTAATACGTCAGT+AGG | + | tig0026076:22789-22808 | Msa1426820:intergenic | 25.0% |
| ! | TTTATGTAATATGAGTAAGG+TGG | - | tig0026076:22972-22991 | Msa1426820:CDS | 25.0% |
| ! | TTACAAATCTTGATTTATGC+AGG | - | tig0026076:23001-23020 | Msa1426820:intron | 25.0% |
| ! | TACAAATCTTGATTTATGCA+GGG | - | tig0026076:23002-23021 | Msa1426820:intron | 25.0% |
| ! | GATTACCAAATTAAGGAAAA+GGG | + | tig0026076:23140-23159 | Msa1426820:intergenic | 25.0% |
| ! | AGATTACCAAATTAAGGAAA+AGG | + | tig0026076:23141-23160 | Msa1426820:intergenic | 25.0% |
| ! | AACCAAAATTACCAGAATAA+GGG | + | tig0026076:23196-23215 | Msa1426820:intergenic | 25.0% |
| ! | AAACCAAAATTACCAGAATA+AGG | + | tig0026076:23197-23216 | Msa1426820:intergenic | 25.0% |
| ! | AATAAATGTCTCATAATGCT+TGG | - | tig0026076:23276-23295 | Msa1426820:intron | 25.0% |
| !!! | TGATTCTTCATTTTTCTTTG+GGG | - | tig0026076:23325-23344 | Msa1426820:intron | 25.0% |
| !!! | ATACTAGTTCTACATTAAGA+TGG | + | tig0026076:23442-23461 | Msa1426820:intergenic | 25.0% |
| ! | CTTAATGTAGAACTAGTATT+TGG | - | tig0026076:23443-23462 | Msa1426820:intron | 25.0% |
| ! | TGTACCAACTGTAATTTATT+AGG | - | tig0026076:23884-23903 | Msa1426820:intron | 25.0% |
| ! | TAAAGAAAAATACAGGAGAA+TGG | + | tig0026076:23963-23982 | Msa1426820:intergenic | 25.0% |
| !! | AATCCTCTAAAGAAAAATAC+AGG | + | tig0026076:23970-23989 | Msa1426820:intergenic | 25.0% |
| ! | ATTACTTCATTACCATCATT+TGG | + | tig0026076:24250-24269 | Msa1426820:intergenic | 25.0% |
| !! | ATGAATTTTGTCTTCTGTTT+TGG | - | tig0026076:24268-24287 | Msa1426820:intron | 25.0% |
| ! | TGATCTTACCAGATATATTA+CGG | - | tig0026076:24370-24389 | Msa1426820:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | tig0026076:24586-24605 | Msa1426820:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | tig0026076:24586-24605 | Msa1426820:intergenic | 25.0% |
| !! | TTCAATTCTCTTTCTTTTCT+TGG | - | tig0026076:24794-24813 | Msa1426820:intron | 25.0% |
| !! | CAATTTTCATTGATACATCA+AGG | - | tig0026076:24848-24867 | Msa1426820:intron | 25.0% |
| ! | TACAACCGTTAATAATATTG+AGG | + | tig0026076:25494-25513 | Msa1426820:intergenic | 25.0% |
| ! | ATATTATTAACGGTTGTATC+TGG | - | tig0026076:25496-25515 | Msa1426820:intron | 25.0% |
| !! | TCAAGGTGCAATTTTGAAAA+TGG | - | tig0026076:16150-16169 | Msa1426820:intron | 30.0% |
| AAATATTACTCTGTTCTGTC+TGG | + | tig0026076:16183-16202 | Msa1426820:intergenic | 30.0% | |
| !! | GATCTTTTTGGCAAAATTAG+GGG | + | tig0026076:16213-16232 | Msa1426820:intergenic | 30.0% |
| ! | ATCTTTTCTTCACCTATCTT+GGG | + | tig0026076:16259-16278 | Msa1426820:intergenic | 30.0% |
| ! | AATCTTTTCTTCACCTATCT+TGG | + | tig0026076:16260-16279 | Msa1426820:intergenic | 30.0% |
| CTCAAAAAGAAAACGAATAG+TGG | + | tig0026076:16322-16341 | Msa1426820:intergenic | 30.0% | |
| ! | TCTCTCGATGCATTTTTATT+TGG | - | tig0026076:16643-16662 | Msa1426820:intron | 30.0% |
| AAAAGCAAAGTTGAAGAACA+AGG | + | tig0026076:16708-16727 | Msa1426820:intergenic | 30.0% | |
| CTTAGAGAATTAGAGATTGT+TGG | - | tig0026076:16731-16750 | Msa1426820:intron | 30.0% | |
| CAGTATTTGAGTAACATAAC+CGG | + | tig0026076:17217-17236 | Msa1426820:intergenic | 30.0% | |
| !!! | ACATTTTTTCTGTCTCATTC+TGG | - | tig0026076:17350-17369 | Msa1426820:CDS | 30.0% |
| TGTATGACGTAAATTGATGT+TGG | - | tig0026076:17434-17453 | Msa1426820:intron | 30.0% | |
| !! | GATGTTGGTAATTTACACAA+CGG | - | tig0026076:17449-17468 | Msa1426820:intron | 30.0% |
| ATGAGAAAATGGGAGAAAAA+AGG | + | tig0026076:17596-17615 | Msa1426820:intergenic | 30.0% | |
| ! | GTCCTATTATTTGAAATCTG+TGG | - | tig0026076:17636-17655 | Msa1426820:CDS | 30.0% |
| !!! | ATAGACTTTTAGCTCATCTT+GGG | - | tig0026076:17778-17797 | Msa1426820:intron | 30.0% |
| !! | ATGTTTGTTCTTTAGTTTGG+TGG | - | tig0026076:17836-17855 | Msa1426820:intron | 30.0% |
| ! | TAAACTAGGCTTTGTAAACA+TGG | + | tig0026076:17906-17925 | Msa1426820:intergenic | 30.0% |
| CTGATAGTTTACATACTGAA+TGG | - | tig0026076:18100-18119 | Msa1426820:intron | 30.0% | |
| GATAGTTTACATACTGAATG+GGG | - | tig0026076:18102-18121 | Msa1426820:intron | 30.0% | |
| ! | TTTGTCACAGGGATTTTAAA+TGG | - | tig0026076:18137-18156 | Msa1426820:intron | 30.0% |
| ! | TTGTCACAGGGATTTTAAAT+GGG | - | tig0026076:18138-18157 | Msa1426820:intron | 30.0% |
| CAAAATTTAGCAGGAATTGA+GGG | + | tig0026076:18173-18192 | Msa1426820:intergenic | 30.0% | |
| TCAAAATTTAGCAGGAATTG+AGG | + | tig0026076:18174-18193 | Msa1426820:intergenic | 30.0% | |
| ! | CAATTCCTGCTAAATTTTGA+TGG | - | tig0026076:18174-18193 | Msa1426820:intron | 30.0% |
| !! | ATTCCTGCTAAATTTTGATG+GGG | - | tig0026076:18176-18195 | Msa1426820:intron | 30.0% |
| TACACATAGAATATACAGAG+GGG | + | tig0026076:18307-18326 | Msa1426820:intergenic | 30.0% | |
| ! | AACATAATAAGCTTCTGAAG+AGG | + | tig0026076:18481-18500 | Msa1426820:intergenic | 30.0% |
| ATGAAATCACTTGCAAAAGA+TGG | + | tig0026076:18757-18776 | Msa1426820:intergenic | 30.0% | |
| ! | CTTTTGCAAGTGATTTCATA+CGG | - | tig0026076:18758-18777 | Msa1426820:intron | 30.0% |
| !! | GTGGTTATCATCTTTAGTTT+TGG | + | tig0026076:19097-19116 | Msa1426820:intergenic | 30.0% |
| GTCATCATTATCTTATGTGA+TGG | - | tig0026076:19146-19165 | Msa1426820:CDS | 30.0% | |
| TAAATGCAAGCGATAAGAAA+AGG | + | tig0026076:19329-19348 | Msa1426820:intergenic | 30.0% | |
| ! | ATTTCTTTTCCTATGCAACT+AGG | - | tig0026076:19367-19386 | Msa1426820:CDS | 30.0% |
| TGTAAATCAATTGTTGTACC+AGG | - | tig0026076:19390-19409 | Msa1426820:CDS | 30.0% | |
| GTAAATCAATTGTTGTACCA+GGG | - | tig0026076:19391-19410 | Msa1426820:CDS | 30.0% | |
| ! | GCACATTTTCTATAACTTCT+TGG | + | tig0026076:19691-19710 | Msa1426820:intergenic | 30.0% |
| !! | AATTCTAGAGTGATATACCA+AGG | + | tig0026076:19727-19746 | Msa1426820:intergenic | 30.0% |
| ! | TTATTTCAAGTAGTTGGACT+AGG | - | tig0026076:19873-19892 | Msa1426820:intron | 30.0% |
| GATGTATGTGGTCTATAATA+TGG | + | tig0026076:20110-20129 | Msa1426820:intergenic | 30.0% | |
| GATAACTTATGGTATTCGTT+TGG | - | tig0026076:20381-20400 | Msa1426820:intron | 30.0% | |
| GAGATTGTCAATATTCGTTT+AGG | - | tig0026076:20627-20646 | Msa1426820:intron | 30.0% | |
| ACTATTGATCAGGTATTTGA+AGG | - | tig0026076:20936-20955 | Msa1426820:intron | 30.0% | |
| CTCAATGAAATTTGGATTAC+AGG | - | tig0026076:21125-21144 | Msa1426820:intron | 30.0% | |
| TTATAAGTATAGCCAACCAT+CGG | + | tig0026076:21223-21242 | Msa1426820:intergenic | 30.0% | |
| TTCTTTATCATTATCTGGGA+CGG | + | tig0026076:21262-21281 | Msa1426820:intergenic | 30.0% | |
| TTGCATGTCATCTTGATTAA+TGG | - | tig0026076:21347-21366 | Msa1426820:intron | 30.0% | |
| ATACATGTAAACCTAGAAAC+TGG | - | tig0026076:21454-21473 | Msa1426820:intron | 30.0% | |
| !! | AAACGACACTCATTTTGAAA+CGG | + | tig0026076:21574-21593 | Msa1426820:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | tig0026076:21575-21594 | Msa1426820:intron | 30.0% |
| GTTAAAAACTCCTGTATCAT+TGG | - | tig0026076:22066-22085 | Msa1426820:intron | 30.0% | |
| ACTGCATGTTTGTTTATTTC+TGG | - | tig0026076:22184-22203 | Msa1426820:intron | 30.0% | |
| ! | CTCTTGAATTGTATGACTTT+TGG | - | tig0026076:22531-22550 | Msa1426820:intron | 30.0% |
| ATTGTGATCTGTGTTTCATT+TGG | - | tig0026076:22560-22579 | Msa1426820:intron | 30.0% | |
| !! | TTTGACTACTTTTGTAAAGG+CGG | + | tig0026076:22690-22709 | Msa1426820:intergenic | 30.0% |
| !! | TGGTTTGACTACTTTTGTAA+AGG | + | tig0026076:22693-22712 | Msa1426820:intergenic | 30.0% |
| !!! | ATAGCATTGTGCTTGTTTTA+TGG | + | tig0026076:22713-22732 | Msa1426820:intergenic | 30.0% |
| TATAAGCAATATCACAAGTG+AGG | + | tig0026076:22869-22888 | Msa1426820:intergenic | 30.0% | |
| TCTTATTGCCTTAGATTAAG+CGG | - | tig0026076:22904-22923 | Msa1426820:intron | 30.0% | |
| AAAATAGACCGCTTAATCTA+AGG | + | tig0026076:22915-22934 | Msa1426820:intergenic | 30.0% | |
| ACAAATCTTGATTTATGCAG+GGG | - | tig0026076:23003-23022 | Msa1426820:intron | 30.0% | |
| ACCAAAATTACCAGAATAAG+GGG | + | tig0026076:23195-23214 | Msa1426820:intergenic | 30.0% | |
| !! | TTTTTCCTTTCCAGTATTGA+TGG | - | tig0026076:23229-23248 | Msa1426820:intron | 30.0% |
| !! | TTCATTTTTCTTTGGGGATT+GGG | - | tig0026076:23331-23350 | Msa1426820:intron | 30.0% |
| !!! | GGATCAACATATTGTTTTTG+AGG | - | tig0026076:23585-23604 | Msa1426820:intron | 30.0% |
| ! | ATGTCTGTACAATTGCTATT+GGG | - | tig0026076:23708-23727 | Msa1426820:intron | 30.0% |
| AGAATGGTAAACACAGTAAA+AGG | + | tig0026076:23947-23966 | Msa1426820:intergenic | 30.0% | |
| ! | TCTCCTGTATTTTTCTTTAG+AGG | - | tig0026076:23964-23983 | Msa1426820:intron | 30.0% |
| AGATCTGTATACATATAACC+AGG | + | tig0026076:24151-24170 | Msa1426820:intergenic | 30.0% | |
| CATGGTTAGAATTGGAATTT+GGG | + | tig0026076:24227-24246 | Msa1426820:intergenic | 30.0% | |
| !! | TGTCTTCTGTTTTGGATAAA+AGG | - | tig0026076:24276-24295 | Msa1426820:intron | 30.0% |
| GTAATATATCTGGTAAGATC+AGG | + | tig0026076:24371-24390 | Msa1426820:intergenic | 30.0% | |
| TGCATTATTACGAGAGAATT+TGG | - | tig0026076:24494-24513 | Msa1426820:intron | 30.0% | |
| !!! | TGCTTATATTTTGGAACAGA+GGG | + | tig0026076:24548-24567 | Msa1426820:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGGAACAG+AGG | + | tig0026076:24549-24568 | Msa1426820:intergenic | 30.0% |
| GATGTATGTGGTTCATAATA+TGG | + | tig0026076:24613-24632 | Msa1426820:intergenic | 30.0% | |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | tig0026076:24662-24681 | Msa1426820:intron | 30.0% |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | tig0026076:24663-24682 | Msa1426820:intron | 30.0% |
| ! | TTGTGCTATATAATGGGATT+CGG | - | tig0026076:24735-24754 | Msa1426820:intron | 30.0% |
| !! | GGTATTCTCTCTGAAAATTT+TGG | - | tig0026076:24756-24775 | Msa1426820:intron | 30.0% |
| CAGGGATCATATATATTTCA+TGG | + | tig0026076:24881-24900 | Msa1426820:intergenic | 30.0% | |
| CAATCTCATACAATTCATCA+GGG | + | tig0026076:24899-24918 | Msa1426820:intergenic | 30.0% | |
| TAATGCTTAGAATGTTTACC+AGG | + | tig0026076:24943-24962 | Msa1426820:intergenic | 30.0% | |
| ! | TTTCTTAATCAAAAGGTGTG+TGG | - | tig0026076:25090-25109 | Msa1426820:intron | 30.0% |
| ACACTCTAATGATGTATCAT+TGG | - | tig0026076:25116-25135 | Msa1426820:intron | 30.0% | |
| ACTATCTTATTGGTGTGTAT+TGG | - | tig0026076:25252-25271 | Msa1426820:intron | 30.0% | |
| TCAAAATTGCACCTTGAATG+CGG | + | tig0026076:16147-16166 | Msa1426820:intergenic | 35.0% | |
| ! | CGCTTGTTTCAAGATCTTTT+TGG | + | tig0026076:16225-16244 | Msa1426820:intergenic | 35.0% |
| AAACGAATAGTGGTTCATTC+TGG | + | tig0026076:16312-16331 | Msa1426820:intergenic | 35.0% | |
| !!! | GGTTTTGAGGGTTAATAAGA+TGG | + | tig0026076:16377-16396 | Msa1426820:intergenic | 35.0% |
| GAACTGTAGAAAAACAGTAC+CGG | + | tig0026076:16560-16579 | Msa1426820:intergenic | 35.0% | |
| TCGAGAGAAGAAACGAAAAA+GGG | + | tig0026076:16631-16650 | Msa1426820:intergenic | 35.0% | |
| ATCGAGAGAAGAAACGAAAA+AGG | + | tig0026076:16632-16651 | Msa1426820:intergenic | 35.0% | |
| AGAGAATTAGAGATTGTTGG+TGG | - | tig0026076:16734-16753 | Msa1426820:intron | 35.0% | |
| AACATTTAGCAAACAAGCAC+CGG | + | tig0026076:16847-16866 | Msa1426820:intergenic | 35.0% | |
| AAGCTATCATGTAGAACTTG+TGG | - | tig0026076:17095-17114 | Msa1426820:CDS | 35.0% | |
| !! | AGAAGCATTTGAATTTCGCA+GGG | + | tig0026076:17189-17208 | Msa1426820:intergenic | 35.0% |
| !! | AAGAAGCATTTGAATTTCGC+AGG | + | tig0026076:17190-17209 | Msa1426820:intergenic | 35.0% |
| ATTCAAATGCTTCTTCTCTC+CGG | - | tig0026076:17195-17214 | Msa1426820:intron | 35.0% | |
| ATTGTATGCTAGACACTTAG+GGG | + | tig0026076:17265-17284 | Msa1426820:intergenic | 35.0% | |
| GATTGTATGCTAGACACTTA+GGG | + | tig0026076:17266-17285 | Msa1426820:intergenic | 35.0% | |
| AGATTGTATGCTAGACACTT+AGG | + | tig0026076:17267-17286 | Msa1426820:intergenic | 35.0% | |
| CGGTGAAGTCTAAGAAATAA+AGG | + | tig0026076:17292-17311 | Msa1426820:intergenic | 35.0% | |
| !! | AGACTTCACCGATTCATATA+TGG | - | tig0026076:17301-17320 | Msa1426820:CDS | 35.0% |
| !! | GTTAAGGAAATTTTGGTCTC+TGG | - | tig0026076:17486-17505 | Msa1426820:intron | 35.0% |
| TAGATATCAGTTGCTAAAGG+TGG | - | tig0026076:17570-17589 | Msa1426820:intron | 35.0% | |
| ! | TCTCCCATTTTCTCATATCT+AGG | - | tig0026076:17600-17619 | Msa1426820:intron | 35.0% |
| !!! | TGGGGCATATTCGTTTTTTT+GGG | + | tig0026076:17697-17716 | Msa1426820:intergenic | 35.0% |
| !!! | ATGGGGCATATTCGTTTTTT+TGG | + | tig0026076:17698-17717 | Msa1426820:intergenic | 35.0% |
| ! | TGATGATAATTTGTGGCGAA+AGG | + | tig0026076:17727-17746 | Msa1426820:intergenic | 35.0% |
| !! | GCTGGTTTGATGATAATTTG+TGG | + | tig0026076:17734-17753 | Msa1426820:intergenic | 35.0% |
| TCTATCCATGGTAAATGAGT+GGG | + | tig0026076:17763-17782 | Msa1426820:intergenic | 35.0% | |
| ATGAGCTAAAAGTCTATCCA+TGG | + | tig0026076:17775-17794 | Msa1426820:intergenic | 35.0% | |
| !!! | GATAGACTTTTAGCTCATCT+TGG | - | tig0026076:17777-17796 | Msa1426820:intron | 35.0% |
| !! | AGGCTTTGTAAACATGGTTT+TGG | + | tig0026076:17900-17919 | Msa1426820:intergenic | 35.0% |
| ACAAAGCCTAGTTTACAACT+TGG | - | tig0026076:17911-17930 | Msa1426820:intron | 35.0% | |
| CAAAGCCTAGTTTACAACTT+GGG | - | tig0026076:17912-17931 | Msa1426820:intron | 35.0% | |
| TAGATCCCAAGTTGTAAACT+AGG | + | tig0026076:17920-17939 | Msa1426820:intergenic | 35.0% | |
| GGGAAAGTGAAAGAGAAATA+GGG | + | tig0026076:18057-18076 | Msa1426820:intergenic | 35.0% | |
| AGGGAAAGTGAAAGAGAAAT+AGG | + | tig0026076:18058-18077 | Msa1426820:intergenic | 35.0% | |
| TTTCTCTTTCACTTTCCCTT+AGG | - | tig0026076:18059-18078 | Msa1426820:intron | 35.0% | |
| TCAACAGTTGCTAAAGTAAG+AGG | - | tig0026076:19283-19302 | Msa1426820:intron | 35.0% | |
| CAACAGTTGCTAAAGTAAGA+GGG | - | tig0026076:19284-19303 | Msa1426820:intron | 35.0% | |
| TGATTTACACCTAGTTGCAT+AGG | + | tig0026076:19379-19398 | Msa1426820:intergenic | 35.0% | |
| ! | TTTTGTTGATACAGAGAGCT+TGG | - | tig0026076:19633-19652 | Msa1426820:intron | 35.0% |
| GTGCAACATACATTTAACCT+TGG | - | tig0026076:19707-19726 | Msa1426820:intron | 35.0% | |
| AAGTCTAAATGTATGCAGCT+GGG | + | tig0026076:19765-19784 | Msa1426820:intergenic | 35.0% | |
| TAATTTCATAGCACGTAGCT+GGG | + | tig0026076:19822-19841 | Msa1426820:intergenic | 35.0% | |
| TTAATTTCATAGCACGTAGC+TGG | + | tig0026076:19823-19842 | Msa1426820:intergenic | 35.0% | |
| ! | ATGTTGCTTACATTTGAGAC+CGG | + | tig0026076:20048-20067 | Msa1426820:intergenic | 35.0% |
| !! | CAATCCGTGTTGATAACTTA+TGG | - | tig0026076:20370-20389 | Msa1426820:intron | 35.0% |
| ACTTTCTCAAGAATGACCAA+TGG | + | tig0026076:20486-20505 | Msa1426820:intergenic | 35.0% | |
| GGTCATTCTTGAGAAAGTTA+AGG | - | tig0026076:20488-20507 | Msa1426820:CDS | 35.0% | |
| ! | AGGTATTTGAAGGTACATCT+GGG | - | tig0026076:20946-20965 | Msa1426820:intron | 35.0% |
| AAAACACATAATTGAGCCGA+TGG | - | tig0026076:21204-21223 | Msa1426820:intron | 35.0% | |
| ! | GAATTTAGCTTCCAGTTTCT+AGG | + | tig0026076:21468-21487 | Msa1426820:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | tig0026076:21705-21724 | Msa1426820:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | tig0026076:21709-21728 | Msa1426820:intron | 35.0% |
| !!! | GACACTCATTTTGAAACAGA+GGG | - | tig0026076:21813-21832 | Msa1426820:CDS | 35.0% |
| !! | GAGTGTTAATTTGTTCTGGA+GGG | - | tig0026076:21835-21854 | Msa1426820:intron | 35.0% |
| !! | AGTGTTAATTTGTTCTGGAG+GGG | - | tig0026076:21836-21855 | Msa1426820:intron | 35.0% |
| AATACTTGGCTAAATTGCAG+AGG | + | tig0026076:21909-21928 | Msa1426820:intergenic | 35.0% | |
| TCTGCAATTTAGCCAAGTAT+TGG | - | tig0026076:21908-21927 | Msa1426820:intron | 35.0% | |
| GGCCAAGAAAACCAATTTAA+AGG | + | tig0026076:21959-21978 | Msa1426820:intergenic | 35.0% | |
| ! | ACAGGAGTTTTTAACACCTA+CGG | + | tig0026076:22061-22080 | Msa1426820:intergenic | 35.0% |
| ! | TGGAAAACCAATTTTACTCG+AGG | - | tig0026076:22117-22136 | Msa1426820:intron | 35.0% |
| AAGTAAGCCTCGAGTAAAAT+TGG | + | tig0026076:22127-22146 | Msa1426820:intergenic | 35.0% | |
| ! | AATTTTACTCGAGGCTTACT+TGG | - | tig0026076:22126-22145 | Msa1426820:intron | 35.0% |
| GTCATGAATTCTATTGCTAG+AGG | - | tig0026076:22319-22338 | Msa1426820:intron | 35.0% | |
| TGTGCAGCAATTTCATTATG+GGG | + | tig0026076:22379-22398 | Msa1426820:intergenic | 35.0% | |
| CTGTGCAGCAATTTCATTAT+GGG | + | tig0026076:22380-22399 | Msa1426820:intergenic | 35.0% | |
| TCTGTGCAGCAATTTCATTA+TGG | + | tig0026076:22381-22400 | Msa1426820:intergenic | 35.0% | |
| GAAGTCTGATAATCTTCTTG+AGG | - | tig0026076:22435-22454 | Msa1426820:intron | 35.0% | |
| GGGGAATAAAAAATGCGATA+AGG | - | tig0026076:22633-22652 | Msa1426820:intron | 35.0% | |
| AATACGTCAGTAGGAACAAA+GGG | + | tig0026076:22780-22799 | Msa1426820:intergenic | 35.0% | |
| TAATACGTCAGTAGGAACAA+AGG | + | tig0026076:22781-22800 | Msa1426820:intergenic | 35.0% | |
| ATTCATGTCAGTTTCTTCAC+AGG | + | tig0026076:22834-22853 | Msa1426820:intergenic | 35.0% | |
| CAAATCTTGATTTATGCAGG+GGG | - | tig0026076:23004-23023 | Msa1426820:intron | 35.0% | |
| !!! | GTTTTTTAAGCGTGACTTTG+AGG | - | tig0026076:23090-23109 | Msa1426820:intron | 35.0% |
| ! | AGTGACCCTTTTCCTTAATT+TGG | - | tig0026076:23132-23151 | Msa1426820:intron | 35.0% |
| TCTTTAATTCCCCCTTATTC+TGG | - | tig0026076:23182-23201 | Msa1426820:intron | 35.0% | |
| CCAAAATTACCAGAATAAGG+GGG | + | tig0026076:23194-23213 | Msa1426820:intergenic | 35.0% | |
| TTCAACCATCAATACTGGAA+AGG | + | tig0026076:23237-23256 | Msa1426820:intergenic | 35.0% | |
| !! | TTCCAGTATTGATGGTTGAA+TGG | - | tig0026076:23237-23256 | Msa1426820:intron | 35.0% |
| !! | CTTCATTTTTCTTTGGGGAT+TGG | - | tig0026076:23330-23349 | Msa1426820:intron | 35.0% |
| !! | TCATTTTTCTTTGGGGATTG+GGG | - | tig0026076:23332-23351 | Msa1426820:intron | 35.0% |
| !! | ACTTCACATGTGTTTGGTTT+TGG | + | tig0026076:23477-23496 | Msa1426820:intergenic | 35.0% |
| TGTACAGACATGTAAGAAAC+AGG | + | tig0026076:23699-23718 | Msa1426820:intergenic | 35.0% | |
| CATGTCTGTACAATTGCTAT+TGG | - | tig0026076:23707-23726 | Msa1426820:intron | 35.0% | |
| ! | TTGCTATTGGGATTTACTGT+AGG | - | tig0026076:23720-23739 | Msa1426820:intron | 35.0% |
| TCTTACTACTGCTGAATATC+TGG | - | tig0026076:23786-23805 | Msa1426820:intron | 35.0% | |
| ! | GAATATCTGGCTTATGAATG+TGG | - | tig0026076:23799-23818 | Msa1426820:intron | 35.0% |
| GCAACAATTTATGAACATGC+CGG | - | tig0026076:24172-24191 | Msa1426820:intron | 35.0% | |
| GCATGGTTAGAATTGGAATT+TGG | + | tig0026076:24228-24247 | Msa1426820:intergenic | 35.0% | |
| TCATTTGGCATGGTTAGAAT+TGG | + | tig0026076:24235-24254 | Msa1426820:intergenic | 35.0% | |
| ATTCTAACCATGCCAAATGA+TGG | - | tig0026076:24235-24254 | Msa1426820:intron | 35.0% | |
| TTCATTACCATCATTTGGCA+TGG | + | tig0026076:24245-24264 | Msa1426820:intergenic | 35.0% | |
| TCTTACCAGATATATTACGG+AGG | - | tig0026076:24373-24392 | Msa1426820:intron | 35.0% | |
| CTTACCAGATATATTACGGA+GGG | - | tig0026076:24374-24393 | Msa1426820:intron | 35.0% | |
| AACTAATCCAACATGGCTTA+TGG | + | tig0026076:24472-24491 | Msa1426820:intergenic | 35.0% | |
| ATGCAGTAACTAATCCAACA+TGG | + | tig0026076:24479-24498 | Msa1426820:intergenic | 35.0% | |
| !! | TGTTGGCTTGTGCTATATAA+TGG | - | tig0026076:24728-24747 | Msa1426820:intron | 35.0% |
| !! | GTTGGCTTGTGCTATATAAT+GGG | - | tig0026076:24729-24748 | Msa1426820:intron | 35.0% |
| CCAATCTCATACAATTCATC+AGG | + | tig0026076:24900-24919 | Msa1426820:intergenic | 35.0% | |
| CCTGATGAATTGTATGAGAT+TGG | - | tig0026076:24897-24916 | Msa1426820:intron | 35.0% | |
| ! | ATGGAAGAACATTGATTGGT+GGG | + | tig0026076:24999-25018 | Msa1426820:intergenic | 35.0% |
| ! | AGTGATGGAAGAACATTGAT+TGG | + | tig0026076:25003-25022 | Msa1426820:intergenic | 35.0% |
| ATGTTCTTCCATCACTATCT+CGG | - | tig0026076:25007-25026 | Msa1426820:CDS | 35.0% | |
| GATTTCAAAGTTCTGTCAAG+TGG | - | tig0026076:25057-25076 | Msa1426820:intron | 35.0% | |
| AGAGAAAATTAGTAGATGCC+AGG | + | tig0026076:25402-25421 | Msa1426820:intergenic | 35.0% | |
| TAGTGAAATTGTCCTTGAAG+TGG | - | tig0026076:25448-25467 | Msa1426820:intron | 35.0% | |
| AGTGAAATTGTCCTTGAAGT+GGG | - | tig0026076:25449-25468 | Msa1426820:intron | 35.0% | |
| CTTCATTAATACCCACTTCA+AGG | + | tig0026076:25463-25482 | Msa1426820:intergenic | 35.0% | |
| ! | AATTTCTGGACAAGTTTGAG+AGG | - | tig0026076:25519-25538 | Msa1426820:intron | 35.0% |
| TAGAGACTGGAATATATTGC+AGG | + | tig0026076:25573-25592 | Msa1426820:intergenic | 35.0% | |
| GATCTTCCTAAACCCAAGAT+AGG | - | tig0026076:16244-16263 | Msa1426820:intron | 40.0% | |
| TCTTCACCTATCTTGGGTTT+AGG | + | tig0026076:16253-16272 | Msa1426820:intergenic | 40.0% | |
| TGAGACGTTAACCTTTAACC+TGG | - | tig0026076:16338-16357 | Msa1426820:intron | 40.0% | |
| ! | TTAGTTGGTGTCCAGGTTAA+AGG | + | tig0026076:16352-16371 | Msa1426820:intergenic | 40.0% |
| TCGATTGAGAAGAAAACGAC+GGG | + | tig0026076:16513-16532 | Msa1426820:intergenic | 40.0% | |
| CTCGATTGAGAAGAAAACGA+CGG | + | tig0026076:16514-16533 | Msa1426820:intergenic | 40.0% | |
| !!! | TTGTTTTGAATAGCTCCCTC+CGG | - | tig0026076:16825-16844 | Msa1426820:intron | 40.0% |
| !! | TGCCACATTTGAGCTGATTT+TGG | - | tig0026076:16980-16999 | Msa1426820:intron | 40.0% |
| CACCAAAATCAGCTCAAATG+TGG | + | tig0026076:16985-17004 | Msa1426820:intergenic | 40.0% | |
| CTGGATTGTAACATGAGGAA+AGG | - | tig0026076:17505-17524 | Msa1426820:intron | 40.0% | |
| !! | GAGGAAAGGAGAAGCATTAT+AGG | - | tig0026076:17519-17538 | Msa1426820:intron | 40.0% |
| !!! | GGCATATTCGTTTTTTTGGG+TGG | + | tig0026076:17694-17713 | Msa1426820:intergenic | 40.0% |
| ! | GATAATTTGTGGCGAAAGGT+TGG | + | tig0026076:17723-17742 | Msa1426820:intergenic | 40.0% |
| GTCTATCCATGGTAAATGAG+TGG | + | tig0026076:17764-17783 | Msa1426820:intergenic | 40.0% | |
| ATGCCCCATCAAAATTTAGC+AGG | + | tig0026076:18182-18201 | Msa1426820:intergenic | 40.0% | |
| !! | CTAAATTTTGATGGGGCATC+TGG | - | tig0026076:18183-18202 | Msa1426820:intron | 40.0% |
| CTTCATGAAGCAAGAGTAAG+TGG | + | tig0026076:18274-18293 | Msa1426820:intergenic | 40.0% | |
| TTGCTTCATGAAGCCTTCTT+TGG | - | tig0026076:18281-18300 | Msa1426820:intron | 40.0% | |
| ACATGGAAATTCCAGTTCGA+AGG | - | tig0026076:18451-18470 | Msa1426820:intron | 40.0% | |
| GCTCTTGCTTAATGTTCTTG+AGG | + | tig0026076:18528-18547 | Msa1426820:intergenic | 40.0% | |
| ACTTGCAAAAGATGGAGACA+GGG | + | tig0026076:18749-18768 | Msa1426820:intergenic | 40.0% | |
| TAGTCAATGAAGACAGCGTT+TGG | - | tig0026076:19542-19561 | Msa1426820:intron | 40.0% | |
| CAAGTCTAAATGTATGCAGC+TGG | + | tig0026076:19766-19785 | Msa1426820:intergenic | 40.0% | |
| CAGCTGCATACATTTAGACT+TGG | - | tig0026076:19764-19783 | Msa1426820:intron | 40.0% | |
| ATCTTGTGTAATACTCCCTC+CGG | - | tig0026076:20026-20045 | Msa1426820:intron | 40.0% | |
| ACAGAATACATGACTGTGTC+TGG | - | tig0026076:20450-20469 | Msa1426820:intron | 40.0% | |
| TAACTTCGGTCAACTGCATT+AGG | - | tig0026076:20590-20609 | Msa1426820:intron | 40.0% | |
| AACTTCGGTCAACTGCATTA+GGG | - | tig0026076:20591-20610 | Msa1426820:intron | 40.0% | |
| GTCAATATTCGTTTAGGCGA+TGG | - | tig0026076:20633-20652 | Msa1426820:intron | 40.0% | |
| ! | GTCAGAAGCTCAGAACATTT+TGG | + | tig0026076:20774-20793 | Msa1426820:intergenic | 40.0% |
| AATAAAGCAGACAACGATGG+AGG | + | tig0026076:20817-20836 | Msa1426820:intergenic | 40.0% | |
| GTGAATAAAGCAGACAACGA+TGG | + | tig0026076:20820-20839 | Msa1426820:intergenic | 40.0% | |
| ! | CAGGTATTTGAAGGTACATC+TGG | - | tig0026076:20945-20964 | Msa1426820:intron | 40.0% |
| TACCTCTCCAGTAAACTGTA+CGG | + | tig0026076:20991-21010 | Msa1426820:intergenic | 40.0% | |
| ! | TATCATTATCTGGGACGGTT+TGG | + | tig0026076:21257-21276 | Msa1426820:intergenic | 40.0% |
| GCTTAGGTGATAGTTACGAT+TGG | + | tig0026076:21292-21311 | Msa1426820:intergenic | 40.0% | |
| TTCTGCTTAGAAAAAAGGGG+AGG | - | tig0026076:21485-21504 | Msa1426820:intron | 40.0% | |
| GAGGGAGTAGAATAGTAATC+AGG | + | tig0026076:21552-21571 | Msa1426820:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | tig0026076:21570-21589 | Msa1426820:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | tig0026076:21708-21727 | Msa1426820:intron | 40.0% |
| !!! | CGACACTCATTTTGAAACAG+AGG | - | tig0026076:21812-21831 | Msa1426820:CDS | 40.0% |
| !! | GAGGGAGTGTTAATTTGTTC+TGG | - | tig0026076:21831-21850 | Msa1426820:intron | 40.0% |
| !! | GGAGTGTTAATTTGTTCTGG+AGG | - | tig0026076:21834-21853 | Msa1426820:intron | 40.0% |
| !! | GTGTTAATTTGTTCTGGAGG+GGG | - | tig0026076:21837-21856 | Msa1426820:intron | 40.0% |
| TTGGCTAAATTGCAGAGGAA+CGG | + | tig0026076:21904-21923 | Msa1426820:intergenic | 40.0% | |
| CTACGGATGTAAACAAGAGA+GGG | + | tig0026076:22044-22063 | Msa1426820:intergenic | 40.0% | |
| CTGTATCATTGGACATGCTT+GGG | - | tig0026076:22077-22096 | Msa1426820:intron | 40.0% | |
| ATGCTTGGGCGGATATTTAA+CGG | - | tig0026076:22091-22110 | Msa1426820:intron | 40.0% | |
| GAGGCTTACTTGGATATATC+AGG | - | tig0026076:22136-22155 | Msa1426820:intron | 40.0% | |
| CAGGATAGGTTCTATCACTA+GGG | + | tig0026076:22264-22283 | Msa1426820:intergenic | 40.0% | |
| TCAGGATAGGTTCTATCACT+AGG | + | tig0026076:22265-22284 | Msa1426820:intergenic | 40.0% | |
| TAGTGATAGAACCTATCCTG+AGG | - | tig0026076:22264-22283 | Msa1426820:intron | 40.0% | |
| AATTTCATTATGGGGGAGAC+CGG | + | tig0026076:22371-22390 | Msa1426820:intergenic | 40.0% | |
| GTGCAGCAATTTCATTATGG+GGG | + | tig0026076:22378-22397 | Msa1426820:intergenic | 40.0% | |
| AGTTTCTTCACAGGAGTTGT+CGG | + | tig0026076:22825-22844 | Msa1426820:intergenic | 40.0% | |
| !!! | TGCCATTGTTTTTGCAGCTA+TGG | - | tig0026076:23045-23064 | Msa1426820:intron | 40.0% |
| !!! | GCCATTGTTTTTGCAGCTAT+GGG | - | tig0026076:23046-23065 | Msa1426820:intron | 40.0% |
| TCCCATAGCTGCAAAAACAA+TGG | + | tig0026076:23050-23069 | Msa1426820:intergenic | 40.0% | |
| ! | CCCCCTTATTCTGGTAATTT+TGG | - | tig0026076:23191-23210 | Msa1426820:intron | 40.0% |
| AGCCATTCAACCATCAATAC+TGG | + | tig0026076:23242-23261 | Msa1426820:intergenic | 40.0% | |
| ACCAAACACATGTGAAGTGT+AGG | - | tig0026076:23479-23498 | Msa1426820:intron | 40.0% | |
| CCAAACACATGTGAAGTGTA+GGG | - | tig0026076:23480-23499 | Msa1426820:intron | 40.0% | |
| GTGATGATACGTTCGATTGT+AGG | + | tig0026076:23754-23773 | Msa1426820:intergenic | 40.0% | |
| TCACTTGTTCTTGATCCTAC+AGG | - | tig0026076:24084-24103 | Msa1426820:intron | 40.0% | |
| TATCTGGTAAGATCAGGAGT+TGG | + | tig0026076:24365-24384 | Msa1426820:intergenic | 40.0% | |
| AGGGACAGATATACATCGAT+AGG | - | tig0026076:24393-24412 | Msa1426820:intron | 40.0% | |
| TAGGCAGTTGCATAATAGAC+AGG | - | tig0026076:24412-24431 | Msa1426820:intron | 40.0% | |
| CAGTTGCATAATAGACAGGT+GGG | - | tig0026076:24416-24435 | Msa1426820:intron | 40.0% | |
| ATGAATGCCATAAGCCATGT+TGG | - | tig0026076:24462-24481 | Msa1426820:intron | 40.0% | |
| TACAATCAGTCTAAGTGACC+TGG | - | tig0026076:24922-24941 | Msa1426820:CDS | 40.0% | |
| ! | GATGGAAGAACATTGATTGG+TGG | + | tig0026076:25000-25019 | Msa1426820:intergenic | 40.0% |
| TTCATCAACCGAGATAGTGA+TGG | + | tig0026076:25018-25037 | Msa1426820:intergenic | 40.0% | |
| !! | ATCACTATCTCGGTTGATGA+AGG | - | tig0026076:25017-25036 | Msa1426820:intron | 40.0% |
| CTGTATGCAACTTATGCCAT+TGG | - | tig0026076:25319-25338 | Msa1426820:intron | 40.0% | |
| TGCAACTTATGCCATTGGAA+AGG | - | tig0026076:25324-25343 | Msa1426820:intron | 40.0% | |
| !! | AGAAGAAGCACTTTCATCTG+AGG | - | tig0026076:25375-25394 | Msa1426820:intron | 40.0% |
| ! | ACGGTTGTATCTGGAATTTC+TGG | - | tig0026076:25505-25524 | Msa1426820:intron | 40.0% |
| ! | GAATATATTGCAGGTGTCGT+AGG | + | tig0026076:25564-25583 | Msa1426820:intergenic | 40.0% |
| ATCTTGCATGGACTTTACTC+CGG | - | tig0026076:25594-25613 | Msa1426820:intron | 40.0% | |
| ! | TACGATGAAGAAGTACACGA+GGG | + | tig0026076:25625-25644 | Msa1426820:intergenic | 40.0% |
| ! | ATACGATGAAGAAGTACACG+AGG | + | tig0026076:25626-25645 | Msa1426820:intergenic | 40.0% |
| GTAAAACTGGTCAAGAGTCT+TGG | + | tig0026076:25654-25673 | Msa1426820:intergenic | 40.0% | |
| ATACAAACTATCGGGGTGTG+CGG | + | tig0026076:16073-16092 | Msa1426820:intergenic | 45.0% | |
| CTTTCACTCATCCGCATTCA+AGG | - | tig0026076:16133-16152 | Msa1426820:CDS | 45.0% | |
| ACTCTGTTCTGTCTGGTATG+TGG | + | tig0026076:16176-16195 | Msa1426820:intergenic | 45.0% | |
| !!! | GATGGTTTTAGTTGGTGTCC+AGG | + | tig0026076:16359-16378 | Msa1426820:intergenic | 45.0% |
| !!! | ACGGTTTTTGAGGTCTTGGA+GGG | + | tig0026076:16466-16485 | Msa1426820:intergenic | 45.0% |
| ! | GAAGAAGACGACGGTTTTTG+AGG | + | tig0026076:16476-16495 | Msa1426820:intergenic | 45.0% |
| !! | GAGGTTGATGAAGAAGACGA+CGG | + | tig0026076:16485-16504 | Msa1426820:intergenic | 45.0% |
| AAGAAAACGACGGGATTGAG+AGG | + | tig0026076:16504-16523 | Msa1426820:intergenic | 45.0% | |
| TGTCACGTCTTCTGATTCTC+CGG | - | tig0026076:16538-16557 | Msa1426820:intron | 45.0% | |
| ACTGAAGACAGTAGCCATCA+GGG | + | tig0026076:16766-16785 | Msa1426820:intergenic | 45.0% | |
| AACTGAAGACAGTAGCCATC+AGG | + | tig0026076:16767-16786 | Msa1426820:intergenic | 45.0% | |
| !! | TTTAGCAAACAAGCACCGGA+GGG | + | tig0026076:16843-16862 | Msa1426820:intergenic | 45.0% |
| !! | ATTTAGCAAACAAGCACCGG+AGG | + | tig0026076:16844-16863 | Msa1426820:intergenic | 45.0% |
| !! | TCGATTTGGGGCTTGTGTTA+TGG | + | tig0026076:17049-17068 | Msa1426820:intergenic | 45.0% |
| GGTCTCTGGATTGTAACATG+AGG | - | tig0026076:17500-17519 | Msa1426820:intron | 45.0% | |
| TCCATGGTAAATGAGTGGGT+GGG | + | tig0026076:17759-17778 | Msa1426820:intergenic | 45.0% | |
| ATCCATGGTAAATGAGTGGG+TGG | + | tig0026076:17760-17779 | Msa1426820:intergenic | 45.0% | |
| !! | AATTTTGATGGGGCATCTGG+TGG | - | tig0026076:18186-18205 | Msa1426820:intron | 45.0% |
| !! | ATTTTGATGGGGCATCTGGT+GGG | - | tig0026076:18187-18206 | Msa1426820:intron | 45.0% |
| ATATACAGAGGGGCCAAAGA+AGG | + | tig0026076:18297-18316 | Msa1426820:intergenic | 45.0% | |
| ! | AGCAAGAGCAGACCAAGTTT+TGG | - | tig0026076:18539-18558 | Msa1426820:intron | 45.0% |
| CACGATGCTCTTCCAAAACT+TGG | + | tig0026076:18554-18573 | Msa1426820:intergenic | 45.0% | |
| TCATAGGGGTGAGCACAAAA+AGG | + | tig0026076:18668-18687 | Msa1426820:intergenic | 45.0% | |
| CACTTGCAAAAGATGGAGAC+AGG | + | tig0026076:18750-18769 | Msa1426820:intergenic | 45.0% | |
| ! | CCTTCATTAGCTCTTCATGC+AGG | + | tig0026076:18804-18823 | Msa1426820:intergenic | 45.0% |
| CCTGCATGAAGAGCTAATGA+AGG | - | tig0026076:18801-18820 | Msa1426820:intron | 45.0% | |
| GAAGAGCTAATGAAGGTGAC+TGG | - | tig0026076:18808-18827 | Msa1426820:intron | 45.0% | |
| ATATAAACCCACACTCCCAC+AGG | + | tig0026076:19009-19028 | Msa1426820:intergenic | 45.0% | |
| ! | GACTGGAGCATTAGACAATG+AGG | + | tig0026076:19227-19246 | Msa1426820:intergenic | 45.0% |
| ATTCGCATTGCTTCAAACCC+TGG | + | tig0026076:19411-19430 | Msa1426820:intergenic | 45.0% | |
| CCAAAATAAGCACGACCAAG+AGG | + | tig0026076:19665-19684 | Msa1426820:intergenic | 45.0% | |
| ! | CCTCTTGGTCGTGCTTATTT+TGG | - | tig0026076:19662-19681 | Msa1426820:intron | 45.0% |
| !!! | CTTGGTCGTGCTTATTTTGG+TGG | - | tig0026076:19665-19684 | Msa1426820:intron | 45.0% |
| ! | TGCTTACATTTGAGACCGGA+GGG | + | tig0026076:20044-20063 | Msa1426820:intergenic | 45.0% |
| ! | TTGCTTACATTTGAGACCGG+AGG | + | tig0026076:20045-20064 | Msa1426820:intergenic | 45.0% |
| TGGTTTCTCACATACTCCCT+CGG | + | tig0026076:20180-20199 | Msa1426820:intergenic | 45.0% | |
| ! | AGGGAGTATGTGAGAAACCA+GGG | - | tig0026076:20180-20199 | Msa1426820:intron | 45.0% |
| ! | ATGACTGTGTCTGGAGTTAC+CGG | - | tig0026076:20459-20478 | Msa1426820:intron | 45.0% |
| CTCAAGAATGACCAATGGTC+CGG | + | tig0026076:20481-20500 | Msa1426820:intergenic | 45.0% | |
| GGACAAGTTCTCGAGATTGA+TGG | - | tig0026076:20669-20688 | Msa1426820:intron | 45.0% | |
| !! | TCTCGAGATTGATGGCGAAA+AGG | - | tig0026076:20677-20696 | Msa1426820:intron | 45.0% |
| CACATAATTGAGCCGATGGT+TGG | - | tig0026076:21208-21227 | Msa1426820:intron | 45.0% | |
| !! | ATTATCTGGGACGGTTTGGT+AGG | + | tig0026076:21253-21272 | Msa1426820:intergenic | 45.0% |
| !! | ACAGCAGTTTTGGCATGCTT+AGG | + | tig0026076:21308-21327 | Msa1426820:intergenic | 45.0% |
| TGACATGCAACACAGTCTGA+CGG | + | tig0026076:21337-21356 | Msa1426820:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | tig0026076:21571-21590 | Msa1426820:intergenic | 45.0% |
| TGTAAACAAGAGAGGGACAG+AGG | + | tig0026076:22037-22056 | Msa1426820:intergenic | 45.0% | |
| CCTACGGATGTAAACAAGAG+AGG | + | tig0026076:22045-22064 | Msa1426820:intergenic | 45.0% | |
| ! | CCTCTCTTGTTTACATCCGT+AGG | - | tig0026076:22042-22061 | Msa1426820:intron | 45.0% |
| CCAAGCATGTCCAATGATAC+AGG | + | tig0026076:22079-22098 | Msa1426820:intergenic | 45.0% | |
| CCTGTATCATTGGACATGCT+TGG | - | tig0026076:22076-22095 | Msa1426820:intron | 45.0% | |
| TATCATTGGACATGCTTGGG+CGG | - | tig0026076:22080-22099 | Msa1426820:intron | 45.0% | |
| GGTTCTATCACTAGGGTTGA+CGG | + | tig0026076:22257-22276 | Msa1426820:intergenic | 45.0% | |
| CTGTATCATCTCCTCAGGAT+AGG | + | tig0026076:22278-22297 | Msa1426820:intergenic | 45.0% | |
| ! | ATCCCTCTATTTTCAGCTGC+CGG | - | tig0026076:22349-22368 | Msa1426820:intron | 45.0% |
| CGATAAGGTTACTGTGCTGA+AGG | - | tig0026076:22648-22667 | Msa1426820:intron | 45.0% | |
| ATCTTGATTTATGCAGGGGG+AGG | - | tig0026076:23007-23026 | Msa1426820:intron | 45.0% | |
| TGCAGCTATGGGAGTTAACA+TGG | - | tig0026076:23057-23076 | Msa1426820:intron | 45.0% | |
| ! | AAGCGTGACTTTGAGGAGAA+TGG | - | tig0026076:23097-23116 | Msa1426820:intron | 45.0% |
| ! | CTTTGAGGAGAATGGCTCAA+TGG | - | tig0026076:23105-23124 | Msa1426820:intron | 45.0% |
| CCCTACACTTCACATGTGTT+TGG | + | tig0026076:23483-23502 | Msa1426820:intergenic | 45.0% | |
| GCAGTAGTAAGAGCAATACG+AGG | + | tig0026076:23778-23797 | Msa1426820:intergenic | 45.0% | |
| TTATGCTGATGCTCTTCGTG+AGG | - | tig0026076:23858-23877 | Msa1426820:intron | 45.0% | |
| TGAACATGCCGGAAGAATTG+AGG | - | tig0026076:24183-24202 | Msa1426820:intron | 45.0% | |
| GAACATGCCGGAAGAATTGA+GGG | - | tig0026076:24184-24203 | Msa1426820:intron | 45.0% | |
| AACATGCCGGAAGAATTGAG+GGG | - | tig0026076:24185-24204 | Msa1426820:intron | 45.0% | |
| TTTACGCCCCTCAATTCTTC+CGG | + | tig0026076:24194-24213 | Msa1426820:intergenic | 45.0% | |
| CTGTCCCTCCGTAATATATC+TGG | + | tig0026076:24381-24400 | Msa1426820:intergenic | 45.0% | |
| GCAGTTGCATAATAGACAGG+TGG | - | tig0026076:24415-24434 | Msa1426820:intron | 45.0% | |
| TGGCTTATGGCATTCATCAC+AGG | + | tig0026076:24459-24478 | Msa1426820:intergenic | 45.0% | |
| TCATTCTGATGTGTCCAACC+AGG | - | tig0026076:25183-25202 | Msa1426820:intron | 45.0% | |
| CAAACAAGAAGAGACCTGGT+TGG | + | tig0026076:25200-25219 | Msa1426820:intergenic | 45.0% | |
| GGAACAAACAAGAAGAGACC+TGG | + | tig0026076:25204-25223 | Msa1426820:intergenic | 45.0% | |
| TCCAGTCTCTAGATCTTGCA+TGG | - | tig0026076:25582-25601 | Msa1426820:intron | 45.0% | |
| TCCATGCAAGATCTAGAGAC+TGG | + | tig0026076:25586-25605 | Msa1426820:intergenic | 45.0% | |
| GAAGTACACGAGGGAAAATC+CGG | + | tig0026076:25616-25635 | Msa1426820:intergenic | 45.0% | |
| !! | AAAATTAAAAAATAAACAAA+AGG | + | tig0026076:17398-17417 | Msa1426820:intergenic | 5.0% |
| TACAAACTATCGGGGTGTGC+GGG | + | tig0026076:16072-16091 | Msa1426820:intergenic | 50.0% | |
| !!! | AGCGGGTTCAGTGGTTTTGA+GGG | + | tig0026076:16389-16408 | Msa1426820:intergenic | 50.0% |
| ! | GTGATGAGTGGGTTTCACGA+CGG | + | tig0026076:16425-16444 | Msa1426820:intergenic | 50.0% |
| !! | GCAACTCTGAGGTGATGAGT+GGG | + | tig0026076:16436-16455 | Msa1426820:intergenic | 50.0% |
| !! | AGCAACTCTGAGGTGATGAG+TGG | + | tig0026076:16437-16456 | Msa1426820:intergenic | 50.0% |
| !!! | GACGGTTTTTGAGGTCTTGG+AGG | + | tig0026076:16467-16486 | Msa1426820:intergenic | 50.0% |
| !!! | GACGACGGTTTTTGAGGTCT+TGG | + | tig0026076:16470-16489 | Msa1426820:intergenic | 50.0% |
| !! | GTTGGTGGTATCATCCCTGA+TGG | - | tig0026076:16749-16768 | Msa1426820:intron | 50.0% |
| TGTGGCGAAAGGTTGGAGAT+GGG | + | tig0026076:17716-17735 | Msa1426820:intergenic | 50.0% | |
| TTGTGGCGAAAGGTTGGAGA+TGG | + | tig0026076:17717-17736 | Msa1426820:intergenic | 50.0% | |
| CCATGGTAAATGAGTGGGTG+GGG | + | tig0026076:17758-17777 | Msa1426820:intergenic | 50.0% | |
| GAAGAGGTTGTCCTTCGAAC+TGG | + | tig0026076:18465-18484 | Msa1426820:intergenic | 50.0% | |
| !! | AGAGCATCGTGTACTAGCAG+AGG | - | tig0026076:18563-18582 | Msa1426820:intron | 50.0% |
| ! | ATTAGCTCTTCATGCAGGCG+AGG | + | tig0026076:18799-18818 | Msa1426820:intergenic | 50.0% |
| AGTAGGCTGAACTGCACTTG+TGG | - | tig0026076:18974-18993 | Msa1426820:intron | 50.0% | |
| TTGTGGCAAGCTCTTCCTGT+GGG | - | tig0026076:18991-19010 | Msa1426820:intron | 50.0% | |
| !! | AGAGCTTGGTGTAGTCCTCT+TGG | - | tig0026076:19647-19666 | Msa1426820:intron | 50.0% |
| ! | TTGCCTACATTTGAGACCCG+AGG | - | tig0026076:20160-20179 | Msa1426820:intron | 50.0% |
| ! | TGCCTACATTTGAGACCCGA+GGG | - | tig0026076:20161-20180 | Msa1426820:intron | 50.0% |
| GGTTTCTCACATACTCCCTC+GGG | + | tig0026076:20179-20198 | Msa1426820:intergenic | 50.0% | |
| ! | GAGGGAGTATGTGAGAAACC+AGG | - | tig0026076:20179-20198 | Msa1426820:intron | 50.0% |
| GTTTAGGCGATGGAACTACC+CGG | - | tig0026076:20643-20662 | Msa1426820:intron | 50.0% | |
| TCTCGAGAACTTGTCCATGC+CGG | + | tig0026076:20665-20684 | Msa1426820:intergenic | 50.0% | |
| TGGCGAAAAGGCTGTTGTTC+AGG | - | tig0026076:20689-20708 | Msa1426820:intron | 50.0% | |
| GACCGTACAGTTTACTGGAG+AGG | - | tig0026076:20986-21005 | Msa1426820:CDS | 50.0% | |
| ! | ACGGGGGATAACAGCAGTTT+TGG | + | tig0026076:21318-21337 | Msa1426820:intergenic | 50.0% |
| ACATGCAACACAGTCTGACG+GGG | + | tig0026076:21335-21354 | Msa1426820:intergenic | 50.0% | |
| GACATGCAACACAGTCTGAC+GGG | + | tig0026076:21336-21355 | Msa1426820:intergenic | 50.0% | |
| ! | TTCTGGAGGGGGAATTTCTC+AGG | - | tig0026076:21848-21867 | Msa1426820:intron | 50.0% |
| ATTGCAGAGGAACGGAGGAT+GGG | + | tig0026076:21896-21915 | Msa1426820:intergenic | 50.0% | |
| AATTGCAGAGGAACGGAGGA+TGG | + | tig0026076:21897-21916 | Msa1426820:intergenic | 50.0% | |
| GCTAAATTGCAGAGGAACGG+AGG | + | tig0026076:21901-21920 | Msa1426820:intergenic | 50.0% | |
| GGGCGGATATTTAACGGTTC+TGG | - | tig0026076:22097-22116 | Msa1426820:intron | 50.0% | |
| CCAGTCTGTATCATCTCCTC+AGG | + | tig0026076:22283-22302 | Msa1426820:intergenic | 50.0% | |
| CCTGAGGAGATGATACAGAC+TGG | - | tig0026076:22280-22299 | Msa1426820:intron | 50.0% | |
| GACCGGCAGCTGAAAATAGA+GGG | + | tig0026076:22354-22373 | Msa1426820:intergenic | 50.0% | |
| AGACCGGCAGCTGAAAATAG+AGG | + | tig0026076:22355-22374 | Msa1426820:intergenic | 50.0% | |
| TGCTGCACAGATTTGTCGTC+AGG | - | tig0026076:22390-22409 | Msa1426820:intron | 50.0% | |
| ! | GGAAGAATTGAGGGGCGTAA+AGG | - | tig0026076:24193-24212 | Msa1426820:intron | 50.0% |
| ! | TCACCACTGCAGAGTGCTAT+TGG | - | tig0026076:25139-25158 | Msa1426820:intron | 50.0% |
| ! | CACCACTGCAGAGTGCTATT+GGG | - | tig0026076:25140-25159 | Msa1426820:intron | 50.0% |
| ! | ACCACTGCAGAGTGCTATTG+GGG | - | tig0026076:25141-25160 | Msa1426820:intron | 50.0% |
| TGGGGAGGGAATGACTAGAA+AGG | - | tig0026076:25159-25178 | Msa1426820:intron | 50.0% | |
| TGCCATTGGAAAGGATGTCC+AGG | - | tig0026076:25333-25352 | Msa1426820:intron | 50.0% | |
| TGCCTGGACATCCTTTCCAA+TGG | + | tig0026076:25338-25357 | Msa1426820:intergenic | 50.0% | |
| CAACGACAGCTTTCATTGCC+TGG | + | tig0026076:25354-25373 | Msa1426820:intergenic | 50.0% | |
| CAGGCAATGAAAGCTGTCGT+TGG | - | tig0026076:25352-25371 | Msa1426820:intron | 50.0% | |
| AGCACTTTCATCTGAGGACC+TGG | - | tig0026076:25381-25400 | Msa1426820:intron | 50.0% | |
| !! | TGAGAGGAAGTTTGTTGCCC+AGG | - | tig0026076:25535-25554 | Msa1426820:intron | 50.0% |
| !! | GAGAGGAAGTTTGTTGCCCA+GGG | - | tig0026076:25536-25555 | Msa1426820:intron | 50.0% |
| AACTGGTCAAGAGTCTTGGC+TGG | + | tig0026076:25650-25669 | Msa1426820:intergenic | 50.0% | |
| CAGCATCTCGGCTGTAAAAC+TGG | + | tig0026076:25667-25686 | Msa1426820:intergenic | 50.0% | |
| ! | CAGTTTTACAGCCGAGATGC+TGG | - | tig0026076:25665-25684 | Msa1426820:intron | 50.0% |
| !! | GAGCGGGTTCAGTGGTTTTG+AGG | + | tig0026076:16390-16409 | Msa1426820:intergenic | 55.0% |
| ! | ATGAGTGGGTTTCACGACGG+CGG | + | tig0026076:16422-16441 | Msa1426820:intergenic | 55.0% |
| AGGGTTTCGCAGCAACTCTG+AGG | + | tig0026076:16447-16466 | Msa1426820:intergenic | 55.0% | |
| GTGGCGAAAGGTTGGAGATG+GGG | + | tig0026076:17715-17734 | Msa1426820:intergenic | 55.0% | |
| TAAATGAGTGGGTGGGGAGC+TGG | + | tig0026076:17752-17771 | Msa1426820:intergenic | 55.0% | |
| CCCCACCCACTCATTTACCA+TGG | - | tig0026076:17755-17774 | Msa1426820:intron | 55.0% | |
| CTTGTGGCAAGCTCTTCCTG+TGG | - | tig0026076:18990-19009 | Msa1426820:intron | 55.0% | |
| AAGCTCTTCCTGTGGGAGTG+TGG | - | tig0026076:18998-19017 | Msa1426820:intron | 55.0% | |
| ! | AGCTCTTCCTGTGGGAGTGT+GGG | - | tig0026076:18999-19018 | Msa1426820:intron | 55.0% |
| ATGCAGCTGGGAACACGTTC+AGG | + | tig0026076:19753-19772 | Msa1426820:intergenic | 55.0% | |
| CTCCCTCGGGTCTCAAATGT+AGG | + | tig0026076:20166-20185 | Msa1426820:intergenic | 55.0% | |
| ! | GTCTGGAGTTACCGGACCAT+TGG | - | tig0026076:20467-20486 | Msa1426820:intron | 55.0% |
| CTCGAGAACTTGTCCATGCC+GGG | + | tig0026076:20664-20683 | Msa1426820:intergenic | 55.0% | |
| CATGCAACACAGTCTGACGG+GGG | + | tig0026076:21334-21353 | Msa1426820:intergenic | 55.0% | |
| AGAGGGACAGAGGAAGTCAG+AGG | + | tig0026076:22027-22046 | Msa1426820:intergenic | 55.0% | |
| GCACAGATTTGTCGTCAGGC+TGG | - | tig0026076:22394-22413 | Msa1426820:intron | 55.0% | |
| CTCTGGCAGCAGATACCTGT+AGG | + | tig0026076:24102-24121 | Msa1426820:intergenic | 55.0% | |
| GGTATCTGCTGCCAGAGAAG+AGG | - | tig0026076:24105-24124 | Msa1426820:intron | 55.0% | |
| TCTTCCTGGCACCTCTTCTC+TGG | + | tig0026076:24119-24138 | Msa1426820:intergenic | 55.0% | |
| CCAGGATAACCACGTCTTCC+TGG | + | tig0026076:24133-24152 | Msa1426820:intergenic | 55.0% | |
| CCAGGAAGACGTGGTTATCC+TGG | - | tig0026076:24130-24149 | Msa1426820:intron | 55.0% | |
| TCCCCAATAGCACTCTGCAG+TGG | + | tig0026076:25145-25164 | Msa1426820:intergenic | 55.0% | |
| ! | ACTGCAGAGTGCTATTGGGG+AGG | - | tig0026076:25144-25163 | Msa1426820:intron | 55.0% |
| ! | CTGCAGAGTGCTATTGGGGA+GGG | - | tig0026076:25145-25164 | Msa1426820:intron | 55.0% |
| ACTATCGGGGTGTGCGGGTA+TGG | + | tig0026076:16067-16086 | Msa1426820:intergenic | 60.0% | |
| !! | ATGCAGGCGAGGTGCTGTCT+CGG | + | tig0026076:18788-18807 | Msa1426820:intergenic | 60.0% |
| GGGACAGAGGAAGTCAGAGG+TGG | + | tig0026076:22024-22043 | Msa1426820:intergenic | 60.0% | |
| !! | GAAGAGGTGCCAGGAAGACG+TGG | - | tig0026076:24121-24140 | Msa1426820:intron | 60.0% |
| TCGGGGTGTGCGGGTATGGT+GGG | + | tig0026076:16063-16082 | Msa1426820:intergenic | 65.0% | |
| ATCGGGGTGTGCGGGTATGG+TGG | + | tig0026076:16064-16083 | Msa1426820:intergenic | 65.0% | |
| ! | GGGTGGATGAGCGGGTTCAG+TGG | + | tig0026076:16398-16417 | Msa1426820:intergenic | 65.0% |
| GTGGGTTTCACGACGGCGGT+GGG | + | tig0026076:16418-16437 | Msa1426820:intergenic | 65.0% | |
| ! | AGTGGGTTTCACGACGGCGG+TGG | + | tig0026076:16419-16438 | Msa1426820:intergenic | 65.0% |
| GGCGATGGAACTACCCGGCA+TGG | - | tig0026076:20648-20667 | Msa1426820:intron | 65.0% | |
| !! | GCTGCCAGAGAAGAGGTGCC+AGG | - | tig0026076:24112-24131 | Msa1426820:intron | 65.0% |
| ! | GCAGGTGTCGTAGGCTCCCT+GGG | + | tig0026076:25555-25574 | Msa1426820:intergenic | 65.0% |
| ! | TGCAGGTGTCGTAGGCTCCC+TGG | + | tig0026076:25556-25575 | Msa1426820:intergenic | 65.0% |
| GGGGTGTGCGGGTATGGTGG+GGG | + | tig0026076:16061-16080 | Msa1426820:intergenic | 70.0% | |
| CGGGGTGTGCGGGTATGGTG+GGG | + | tig0026076:16062-16081 | Msa1426820:intergenic | 70.0% | |
| ACGGCGGTGGGTGGATGAGC+GGG | + | tig0026076:16406-16425 | Msa1426820:intergenic | 70.0% | |
| GACGGCGGTGGGTGGATGAG+CGG | + | tig0026076:16407-16426 | Msa1426820:intergenic | 70.0% | |
| GGTTTCACGACGGCGGTGGG+TGG | + | tig0026076:16415-16434 | Msa1426820:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026076 | gene | 15786 | 25694 | 15786 | ID=Msa1426820;Name=Msa1426820 |
| tig0026076 | mRNA | 15786 | 25694 | 15786 | ID=Msa1426820-mRNA-1;Parent=Msa1426820;Name=Msa1426820-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0.68|0.6|0.9|0.63|0.7|20|0|588 |
| tig0026076 | exon | 25690 | 25694 | 25690 | ID=Msa1426820-mRNA-1:exon:5149;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 25539 | 25546 | 25539 | ID=Msa1426820-mRNA-1:exon:5148;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 24921 | 25030 | 24921 | ID=Msa1426820-mRNA-1:exon:5147;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 22908 | 23014 | 22908 | ID=Msa1426820-mRNA-1:exon:5146;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 22658 | 22775 | 22658 | ID=Msa1426820-mRNA-1:exon:5145;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 21752 | 21833 | 21752 | ID=Msa1426820-mRNA-1:exon:5144;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 20971 | 21026 | 20971 | ID=Msa1426820-mRNA-1:exon:5143;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 20770 | 20868 | 20770 | ID=Msa1426820-mRNA-1:exon:5142;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 20473 | 20532 | 20473 | ID=Msa1426820-mRNA-1:exon:5141;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 19323 | 19416 | 19323 | ID=Msa1426820-mRNA-1:exon:5140;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 19024 | 19232 | 19024 | ID=Msa1426820-mRNA-1:exon:5139;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 18380 | 18457 | 18380 | ID=Msa1426820-mRNA-1:exon:5138;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 17601 | 17738 | 17601 | ID=Msa1426820-mRNA-1:exon:5137;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 17224 | 17374 | 17224 | ID=Msa1426820-mRNA-1:exon:5136;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 17047 | 17129 | 17047 | ID=Msa1426820-mRNA-1:exon:5135;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 16442 | 16489 | 16442 | ID=Msa1426820-mRNA-1:exon:5134;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 16276 | 16329 | 16276 | ID=Msa1426820-mRNA-1:exon:5133;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 16053 | 16161 | 16053 | ID=Msa1426820-mRNA-1:exon:5132;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 16010 | 16029 | 16010 | ID=Msa1426820-mRNA-1:exon:5131;Parent=Msa1426820-mRNA-1 |
| tig0026076 | exon | 15786 | 15923 | 15786 | ID=Msa1426820-mRNA-1:exon:5130;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 25690 | 25694 | 25690 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 25539 | 25546 | 25539 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 24921 | 25030 | 24921 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 22908 | 23014 | 22908 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 22658 | 22775 | 22658 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 21752 | 21833 | 21752 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 20971 | 21026 | 20971 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 20770 | 20868 | 20770 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 20473 | 20532 | 20473 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 19323 | 19416 | 19323 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 19024 | 19232 | 19024 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 18380 | 18457 | 18380 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 17601 | 17738 | 17601 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 17224 | 17374 | 17224 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 17047 | 17129 | 17047 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 16442 | 16489 | 16442 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 16276 | 16329 | 16276 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 16053 | 16161 | 16053 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 16010 | 16029 | 16010 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| tig0026076 | CDS | 15786 | 15923 | 15786 | ID=Msa1426820-mRNA-1:cds;Parent=Msa1426820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
