Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0045100 | sp|Q9SZN1|VATB2_ARATH | 84.043 | 470 | 51 | 5 | 106 | 551 | 18 | 487 | 0.0 | 780 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045060 | Msa0045100 | 0.829334 | 5.454761e-55 | -8.615850e-47 |
| Msa0045080 | Msa0045100 | 0.807122 | 5.898127e-50 | -8.615850e-47 |
| Msa0045090 | Msa0045100 | 0.894972 | 1.490411e-75 | -8.615850e-47 |
| Msa0045100 | Msa0045120 | 0.895435 | 9.609265e-76 | -8.615850e-47 |
| Msa0045100 | Msa0045140 | 0.884604 | 1.664570e-71 | -8.615850e-47 |
| Msa0045100 | Msa0045150 | 0.901420 | 2.728271e-78 | -8.615850e-47 |
| Msa0045100 | Msa0045160 | 0.958415 | 2.494102e-116 | -8.615850e-47 |
| Msa0045100 | Msa0045350 | 0.886456 | 3.365628e-72 | -8.615850e-47 |
| Msa0045100 | Msa0045370 | 0.907615 | 4.185824e-81 | -8.615850e-47 |
| Msa0045100 | Msa0045380 | 0.971444 | 3.580723e-133 | -8.615850e-47 |
| Msa0045100 | Msa0045400 | 0.877235 | 7.391337e-69 | -8.615850e-47 |
| Msa0045100 | Msa0045420 | 0.887450 | 1.411660e-72 | -8.615850e-47 |
| Msa0045100 | Msa1085000 | 0.885943 | 5.256691e-72 | -8.615850e-47 |
| Msa0045100 | Msa1085010 | 0.949895 | 5.022086e-108 | -8.615850e-47 |
| Msa0045100 | Msa1426790 | 0.899413 | 2.030512e-77 | -8.615850e-47 |
| Msa0045100 | Msa1426820 | 0.939965 | 5.217330e-100 | -8.615850e-47 |
| Msa0045100 | Msa1426840 | 0.878369 | 2.970628e-69 | -8.615850e-47 |
| Msa0045100 | Msa1432570 | 0.801494 | 8.769794e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0045100 | MtrunA17_Chr1g0211291 | 84.501 | 471 | 48 | 5 | 106 | 551 | 19 | 489 | 0.0 | 784 |
| Msa0045100 | MtrunA17_Chr7g0250051 | 84.468 | 470 | 49 | 5 | 106 | 551 | 18 | 487 | 0.0 | 783 |
| Msa0045100 | MtrunA17_Chr1g0208751 | 26.727 | 333 | 218 | 6 | 176 | 490 | 153 | 477 | 2.08e-22 | 100 |
| Msa0045100 | MtrunA17_Chr1g0208761 | 26.205 | 332 | 221 | 5 | 176 | 490 | 156 | 480 | 6.27e-22 | 99.8 |
| Msa0045100 | MtrunA17_Chr4g0015651 | 27.654 | 358 | 207 | 11 | 131 | 447 | 25 | 371 | 2.74e-21 | 97.4 |
| Msa0045100 | MtrunA17_Chr4g0016741 | 27.654 | 358 | 207 | 11 | 131 | 447 | 25 | 371 | 2.74e-21 | 97.4 |
| Msa0045100 | MtrunA17_CPg0492941 | 27.654 | 358 | 207 | 11 | 131 | 447 | 25 | 371 | 2.74e-21 | 97.4 |
| Msa0045100 | MtrunA17_Chr4g0016371 | 27.221 | 349 | 220 | 8 | 163 | 490 | 43 | 378 | 2.87e-21 | 96.7 |
| Msa0045100 | MtrunA17_Chr3g0090971 | 28.242 | 347 | 219 | 8 | 163 | 490 | 82 | 417 | 3.96e-21 | 96.7 |
| Msa0045100 | MtrunA17_CPg0493401 | 27.221 | 349 | 220 | 8 | 163 | 490 | 82 | 417 | 4.37e-21 | 96.7 |
| Msa0045100 | MtrunA17_Chr7g0229391 | 27.221 | 349 | 220 | 8 | 163 | 490 | 82 | 417 | 4.78e-21 | 96.3 |
| Msa0045100 | MtrunA17_MTg0490471 | 26.398 | 322 | 217 | 7 | 144 | 447 | 62 | 381 | 5.00e-20 | 93.6 |
| Msa0045100 | MtrunA17_Chr4g0000341 | 31.469 | 143 | 92 | 2 | 305 | 442 | 319 | 460 | 3.02e-14 | 75.9 |
| Msa0045100 | MtrunA17_Chr2g0278821 | 29.012 | 162 | 107 | 3 | 305 | 464 | 9 | 164 | 2.33e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0045100 | AT4G38510.5 | 84.043 | 470 | 51 | 5 | 106 | 551 | 25 | 494 | 0.0 | 781 |
| Msa0045100 | AT4G38510.1 | 84.043 | 470 | 51 | 5 | 106 | 551 | 18 | 487 | 0.0 | 780 |
| Msa0045100 | AT4G38510.3 | 84.043 | 470 | 51 | 5 | 106 | 551 | 18 | 487 | 0.0 | 780 |
| Msa0045100 | AT4G38510.4 | 84.043 | 470 | 51 | 5 | 106 | 551 | 18 | 487 | 0.0 | 780 |
| Msa0045100 | AT4G38510.2 | 84.043 | 470 | 51 | 5 | 106 | 551 | 18 | 487 | 0.0 | 780 |
| Msa0045100 | AT1G20260.1 | 83.582 | 469 | 52 | 6 | 106 | 549 | 17 | 485 | 0.0 | 771 |
| Msa0045100 | AT1G76030.1 | 82.809 | 477 | 58 | 6 | 97 | 549 | 8 | 484 | 0.0 | 769 |
| Msa0045100 | AT5G08690.1 | 27.429 | 350 | 225 | 8 | 160 | 490 | 138 | 477 | 1.94e-23 | 104 |
| Msa0045100 | AT5G08670.1 | 27.429 | 350 | 225 | 8 | 160 | 490 | 138 | 477 | 2.03e-23 | 104 |
| Msa0045100 | AT5G08680.1 | 27.429 | 350 | 225 | 8 | 160 | 490 | 141 | 480 | 2.60e-23 | 104 |
| Msa0045100 | ATMG01190.1 | 26.708 | 322 | 216 | 7 | 144 | 447 | 62 | 381 | 7.50e-22 | 99.4 |
| Msa0045100 | AT2G07698.1 | 26.791 | 321 | 215 | 7 | 145 | 447 | 333 | 651 | 2.28e-21 | 99.0 |
| Msa0045100 | ATCG00120.1 | 27.171 | 357 | 208 | 11 | 132 | 447 | 26 | 371 | 4.05e-21 | 97.1 |
| Msa0045100 | ATCG00480.1 | 27.164 | 335 | 211 | 7 | 177 | 490 | 95 | 417 | 8.48e-21 | 96.3 |
| Msa0045100 | AT1G78900.1 | 28.351 | 194 | 128 | 4 | 305 | 490 | 318 | 508 | 2.04e-14 | 76.6 |
| Msa0045100 | AT1G78900.2 | 28.351 | 194 | 128 | 4 | 305 | 490 | 318 | 508 | 2.04e-14 | 76.6 |
Find 134 sgRNAs with CRISPR-Local
Find 596 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGACAATCTCTTGATATT+TGG | 0.086118 | 1_1:+76803807 | None:intergenic |
| GCATGGTTAGAATTGGAATT+TGG | 0.112862 | 1_1:+76800193 | None:intergenic |
| CCTCTTGGTCGTGCTTATTT+TGG | 0.178155 | 1_1:-76804762 | Msa0045100:CDS |
| TCTTACTACTGCTGAATATC+TGG | 0.262357 | 1_1:-76800637 | Msa0045100:CDS |
| TTGACAATCTCTTGATATTT+GGG | 0.268902 | 1_1:+76803808 | None:intergenic |
| TTTACGACCATACAGTTTAC+TGG | 0.279378 | 1_1:-76803442 | Msa0045100:CDS |
| GGGCGGATATTTAACGGTTC+TGG | 0.291085 | 1_1:-76802326 | Msa0045100:CDS |
| AAGTAAGCCTCGAGTAAAAT+TGG | 0.302617 | 1_1:+76802299 | None:intergenic |
| CATGGTTAGAATTGGAATTT+GGG | 0.316289 | 1_1:+76800194 | None:intergenic |
| CCAGGATAACCACGTCTTCC+TGG | 0.316708 | 1_1:+76800288 | None:intergenic |
| TCACCACTGCAGAGTGCTAT+TGG | 0.329482 | 1_1:-76799279 | Msa0045100:intron |
| TCATTTGGCATGGTTAGAAT+TGG | 0.334129 | 1_1:+76800186 | None:intergenic |
| CACCACTGCAGAGTGCTATT+GGG | 0.340834 | 1_1:-76799278 | Msa0045100:intron |
| CAGGTATTTGAAGGTACATC+TGG | 0.345618 | 1_1:-76803478 | Msa0045100:CDS |
| GAGATTGTCAATATTCGTTT+AGG | 0.348480 | 1_1:-76803796 | Msa0045100:CDS |
| CTGTCCCTCCGTAATATATC+TGG | 0.348917 | 1_1:+76800040 | None:intergenic |
| CTGTGCAGCAATTTCATTAT+GGG | 0.352240 | 1_1:+76802046 | None:intergenic |
| TCTGTGCAGCAATTTCATTA+TGG | 0.352813 | 1_1:+76802045 | None:intergenic |
| ATTACTTCATTACCATCATT+TGG | 0.354095 | 1_1:+76800171 | None:intergenic |
| CAGCATCTCGGCTGTAAAAC+TGG | 0.358949 | 1_1:+76798745 | None:intergenic |
| ATGACTGTGTCTGGAGTTAC+CGG | 0.376731 | 1_1:-76803964 | Msa0045100:CDS |
| GAGGCTTACTTGGATATATC+AGG | 0.402927 | 1_1:-76802287 | Msa0045100:intron |
| GGTCATTCTTGAGAAAGTTA+AGG | 0.412036 | 1_1:-76803935 | Msa0045100:intron |
| TGCTGCACAGATTTGTCGTC+AGG | 0.414638 | 1_1:-76802033 | Msa0045100:CDS |
| TGGCGAAAAGGCTGTTGTTC+AGG | 0.415818 | 1_1:-76803734 | Msa0045100:intron |
| TTTACGCCCCTCAATTCTTC+CGG | 0.416790 | 1_1:+76800227 | None:intergenic |
| CAACGACAGCTTTCATTGCC+TGG | 0.422877 | 1_1:+76799064 | None:intergenic |
| CTTCATTAATACCCACTTCA+AGG | 0.424318 | 1_1:+76798949 | None:intergenic |
| TCTTCCTGGCACCTCTTCTC+TGG | 0.425819 | 1_1:+76800302 | None:intergenic |
| TAGAGACTGGAATATATTGC+AGG | 0.434624 | 1_1:+76798839 | None:intergenic |
| ATGAAATCACTTGCAAAAGA+TGG | 0.438991 | 1_1:+76805659 | None:intergenic |
| CTGTATCATTGGACATGCTT+GGG | 0.442480 | 1_1:-76802346 | Msa0045100:CDS |
| ATGCTTGGGCGGATATTTAA+CGG | 0.445195 | 1_1:-76802332 | Msa0045100:CDS |
| CCAAGCATGTCCAATGATAC+AGG | 0.451792 | 1_1:+76802347 | None:intergenic |
| GAAGTACACGAGGGAAAATC+CGG | 0.454247 | 1_1:+76798796 | None:intergenic |
| TGATCTTACCAGATATATTA+CGG | 0.458091 | 1_1:-76800048 | Msa0045100:CDS |
| GTGATGATACGTTCGATTGT+AGG | 0.458361 | 1_1:+76800672 | None:intergenic |
| CCAGGAAGACGTGGTTATCC+TGG | 0.466984 | 1_1:-76800288 | Msa0045100:CDS |
| CCTGTATCATTGGACATGCT+TGG | 0.467212 | 1_1:-76802347 | Msa0045100:CDS |
| GTCAATATTCGTTTAGGCGA+TGG | 0.473500 | 1_1:-76803790 | Msa0045100:CDS |
| AGACCGGCAGCTGAAAATAG+AGG | 0.475986 | 1_1:+76802071 | None:intergenic |
| TGAACATGCCGGAAGAATTG+AGG | 0.476429 | 1_1:-76800235 | Msa0045100:CDS |
| CTCGAGAACTTGTCCATGCC+GGG | 0.477725 | 1_1:+76803762 | None:intergenic |
| CACTTGCAAAAGATGGAGAC+AGG | 0.478454 | 1_1:+76805666 | None:intergenic |
| GGACAAGTTCTCGAGATTGA+TGG | 0.478592 | 1_1:-76803754 | Msa0045100:CDS |
| GCACAGATTTGTCGTCAGGC+TGG | 0.482424 | 1_1:-76802029 | Msa0045100:CDS |
| ACTATTGATCAGGTATTTGA+AGG | 0.488267 | 1_1:-76803487 | Msa0045100:intron |
| ACAGAATACATGACTGTGTC+TGG | 0.496594 | 1_1:-76803973 | Msa0045100:intron |
| CCAGTCTGTATCATCTCCTC+AGG | 0.497280 | 1_1:+76802143 | None:intergenic |
| TCAGGATAGGTTCTATCACT+AGG | 0.497405 | 1_1:+76802161 | None:intergenic |
| GTAATATATCTGGTAAGATC+AGG | 0.498299 | 1_1:+76800050 | None:intergenic |
| GCTGCCAGAGAAGAGGTGCC+AGG | 0.506143 | 1_1:-76800306 | Msa0045100:CDS |
| GAACATGCCGGAAGAATTGA+GGG | 0.507410 | 1_1:-76800234 | Msa0045100:CDS |
| CTCAAGAATGACCAATGGTC+CGG | 0.512187 | 1_1:+76803945 | None:intergenic |
| TCTCGAGAACTTGTCCATGC+CGG | 0.512745 | 1_1:+76803761 | None:intergenic |
| ATGTTCTTCCATCACTATCT+CGG | 0.513623 | 1_1:-76799411 | Msa0045100:CDS |
| TCCATGCAAGATCTAGAGAC+TGG | 0.515422 | 1_1:+76798826 | None:intergenic |
| TGCAGCTATGGGAGTTAACA+TGG | 0.517732 | 1_1:-76801366 | Msa0045100:CDS |
| AGAGCTTGGTGTAGTCCTCT+TGG | 0.517761 | 1_1:-76804777 | Msa0045100:CDS |
| TGCCATTGGAAAGGATGTCC+AGG | 0.518353 | 1_1:-76799082 | Msa0045100:CDS |
| ATCACTATCTCGGTTGATGA+AGG | 0.519694 | 1_1:-76799401 | Msa0045100:intron |
| ATCTTGCATGGACTTTACTC+CGG | 0.519977 | 1_1:-76798815 | Msa0045100:CDS |
| ATTCTAACCATGCCAAATGA+TGG | 0.521293 | 1_1:-76800183 | Msa0045100:intron |
| GTCTGGAGTTACCGGACCAT+TGG | 0.521668 | 1_1:-76803956 | Msa0045100:CDS |
| GGTTCTATCACTAGGGTTGA+CGG | 0.522874 | 1_1:+76802169 | None:intergenic |
| TACCTCTCCAGTAAACTGTA+TGG | 0.524401 | 1_1:+76803435 | None:intergenic |
| TCTCGAGATTGATGGCGAAA+AGG | 0.527436 | 1_1:-76803746 | Msa0045100:CDS |
| GTAAAACTGGTCAAGAGTCT+TGG | 0.529021 | 1_1:+76798758 | None:intergenic |
| TGGGGAGGGAATGACTAGAA+AGG | 0.531100 | 1_1:-76799259 | Msa0045100:CDS |
| GAATATATTGCAGGTGTCGT+AGG | 0.532438 | 1_1:+76798848 | None:intergenic |
| TTCATTACCATCATTTGGCA+TGG | 0.532782 | 1_1:+76800176 | None:intergenic |
| GTGCAACATACATTTAACCT+TGG | 0.533755 | 1_1:-76804717 | Msa0045100:intron |
| CCTTCATTAGCTCTTCAAGC+AGG | 0.534184 | 1_1:+76805612 | None:intergenic |
| TGTCACGTCTTCTGATTCTC+CGG | 0.535001 | 1_1:-76807632 | Msa0045100:intron |
| CTGTATGCAACTTATGCCAT+TGG | 0.536747 | 1_1:-76799096 | Msa0045100:CDS |
| AGCACTTTCATCTGAGGACC+TGG | 0.537514 | 1_1:-76799034 | Msa0045100:CDS |
| TAGGCAGTTGCATAATAGAC+AGG | 0.544818 | 1_1:-76800006 | Msa0045100:intron |
| TCCAGTCTCTAGATCTTGCA+TGG | 0.545696 | 1_1:-76798827 | Msa0045100:CDS |
| CTGTATCATCTCCTCAGGAT+AGG | 0.550371 | 1_1:+76802148 | None:intergenic |
| ATCATCAATTACCAGCATCT+CGG | 0.552362 | 1_1:+76798733 | None:intergenic |
| AGTGATGGAAGAACATTGAT+TGG | 0.552550 | 1_1:+76799418 | None:intergenic |
| AACTGGTCAAGAGTCTTGGC+TGG | 0.554684 | 1_1:+76798762 | None:intergenic |
| GGAAGAATTGAGGGGCGTAA+AGG | 0.556865 | 1_1:-76800225 | Msa0045100:CDS |
| CCTGAGGAGATGATACAGAC+TGG | 0.558233 | 1_1:-76802143 | Msa0045100:CDS |
| AGAGAAAATTAGTAGATGCC+AGG | 0.561602 | 1_1:+76799016 | None:intergenic |
| ACCACTGCAGAGTGCTATTG+GGG | 0.563672 | 1_1:-76799277 | Msa0045100:intron |
| TGCCTGGACATCCTTTCCAA+TGG | 0.569487 | 1_1:+76799080 | None:intergenic |
| TAGTGAAATTGTCCTTGAAG+TGG | 0.569681 | 1_1:-76798961 | Msa0045100:CDS |
| CTGCAGAGTGCTATTGGGGA+GGG | 0.572458 | 1_1:-76799273 | Msa0045100:intron |
| GGCGATGGAACTACCCGGCA+TGG | 0.573515 | 1_1:-76803775 | Msa0045100:CDS |
| GCAACAATTTATGAACATGC+CGG | 0.577220 | 1_1:-76800246 | Msa0045100:CDS |
| CAGGCAATGAAAGCTGTCGT+TGG | 0.577939 | 1_1:-76799063 | Msa0045100:CDS |
| TGTGCAGCAATTTCATTATG+GGG | 0.578028 | 1_1:+76802047 | None:intergenic |
| TCATTCTGATGTGTCCAACC+AGG | 0.578586 | 1_1:-76799235 | Msa0045100:intron |
| CAGGATAGGTTCTATCACTA+GGG | 0.584904 | 1_1:+76802162 | None:intergenic |
| AAGAAAACGACGGGATTGAG+AGG | 0.586955 | 1_1:+76807669 | None:intergenic |
| TCGATTGAGAAGAAAACGAC+GGG | 0.590073 | 1_1:+76807660 | None:intergenic |
| GAATATCTGGCTTATGAATG+TGG | 0.590666 | 1_1:-76800624 | Msa0045100:CDS |
| CCTGCTTGAAGAGCTAATGA+AGG | 0.599554 | 1_1:-76805612 | Msa0045100:intron |
| AGTGAAATTGTCCTTGAAGT+GGG | 0.600879 | 1_1:-76798960 | Msa0045100:intron |
| ATGGAAGAACATTGATTGGT+GGG | 0.602705 | 1_1:+76799422 | None:intergenic |
| AGGTATTTGAAGGTACATCT+GGG | 0.603787 | 1_1:-76803477 | Msa0045100:CDS |
| AGGGACAGATATACATCGAT+AGG | 0.603945 | 1_1:-76800025 | Msa0045100:CDS |
| TATCATTGGACATGCTTGGG+CGG | 0.609865 | 1_1:-76802343 | Msa0045100:CDS |
| TATCTGGTAAGATCAGGAGT+TGG | 0.610819 | 1_1:+76800056 | None:intergenic |
| TTCATCAACCGAGATAGTGA+TGG | 0.612897 | 1_1:+76799403 | None:intergenic |
| AGAAGAAGCACTTTCATCTG+AGG | 0.617772 | 1_1:-76799040 | Msa0045100:CDS |
| ATTAGCTCTTCAAGCAGGCG+AGG | 0.618540 | 1_1:+76805617 | None:intergenic |
| TTATGCTGATGCTCTTCGTG+AGG | 0.621125 | 1_1:-76800565 | Msa0045100:intron |
| CCAAAATAAGCACGACCAAG+AGG | 0.622212 | 1_1:+76804762 | None:intergenic |
| GTCATGAATTCTATTGCTAG+AGG | 0.622259 | 1_1:-76802104 | Msa0045100:CDS |
| GGTATCTGCTGCCAGAGAAG+AGG | 0.624465 | 1_1:-76800313 | Msa0045100:CDS |
| GACCATACAGTTTACTGGAG+AGG | 0.624751 | 1_1:-76803437 | Msa0045100:intron |
| GAAGAGGTGCCAGGAAGACG+TGG | 0.628045 | 1_1:-76800297 | Msa0045100:CDS |
| GTGCAGCAATTTCATTATGG+GGG | 0.632413 | 1_1:+76802048 | None:intergenic |
| GATGGAAGAACATTGATTGG+TGG | 0.633609 | 1_1:+76799421 | None:intergenic |
| ACTGCAGAGTGCTATTGGGG+AGG | 0.635578 | 1_1:-76799274 | Msa0045100:intron |
| GACCGGCAGCTGAAAATAGA+GGG | 0.638267 | 1_1:+76802072 | None:intergenic |
| ACTTTCTCAAGAATGACCAA+TGG | 0.645136 | 1_1:+76803940 | None:intergenic |
| GAAGTCTGATAATCTTCTTG+AGG | 0.648163 | 1_1:-76801988 | Msa0045100:intron |
| TGCAACTTATGCCATTGGAA+AGG | 0.655175 | 1_1:-76799091 | Msa0045100:CDS |
| CTTACCAGATATATTACGGA+GGG | 0.659583 | 1_1:-76800044 | Msa0045100:CDS |
| AGATCTGTATACATATAACC+AGG | 0.661413 | 1_1:+76800270 | None:intergenic |
| CAAACAAGAAGAGACCTGGT+TGG | 0.666933 | 1_1:+76799221 | None:intergenic |
| GTTTAGGCGATGGAACTACC+CGG | 0.678023 | 1_1:-76803780 | Msa0045100:CDS |
| CTCGATTGAGAAGAAAACGA+CGG | 0.679795 | 1_1:+76807659 | None:intergenic |
| GAGGTTGATGAAGAAGACGA+CGG | 0.681666 | 1_1:+76807688 | None:intergenic |
| ACTTGCAAAAGATGGAGACA+GGG | 0.688727 | 1_1:+76805667 | None:intergenic |
| TAGTGATAGAACCTATCCTG+AGG | 0.709001 | 1_1:-76802159 | Msa0045100:CDS |
| TCTTACCAGATATATTACGG+AGG | 0.728933 | 1_1:-76800045 | Msa0045100:CDS |
| ATACGATGAAGAAGTACACG+AGG | 0.729276 | 1_1:+76798786 | None:intergenic |
| GCAGTAGTAAGAGCAATACG+AGG | 0.737884 | 1_1:+76800648 | None:intergenic |
| TACGATGAAGAAGTACACGA+GGG | 0.742809 | 1_1:+76798787 | None:intergenic |
| AACATGCCGGAAGAATTGAG+GGG | 0.764342 | 1_1:-76800233 | Msa0045100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAATGAAAATATGTAT+TGG | + | chr1_1:76798776-76798795 | None:intergenic | 10.0% |
| !!! | ATATTTTAATTGAGAAAATT+GGG | - | chr1_1:76799855-76799874 | Msa0045100:intron | 10.0% |
| !! | AAAAAAAATGTATCTTAAAT+CGG | - | chr1_1:76802904-76802923 | Msa0045100:intron | 10.0% |
| !!! | TAATATATTTCTAATTATTC+AGG | - | chr1_1:76804924-76804943 | Msa0045100:intron | 10.0% |
| !!! | ATTATAATTTTTTTAACAAG+GGG | + | chr1_1:76806343-76806362 | None:intergenic | 10.0% |
| !!! | CATTATAATTTTTTTAACAA+GGG | + | chr1_1:76806344-76806363 | None:intergenic | 10.0% |
| !!! | TCATTATAATTTTTTTAACA+AGG | + | chr1_1:76806345-76806364 | None:intergenic | 10.0% |
| !!! | TTTTTTTACTTAAGCTTTAA+AGG | - | chr1_1:76798871-76798890 | Msa0045100:intron | 15.0% |
| !!! | TATCTCAATATATTTTGATT+TGG | - | chr1_1:76799553-76799572 | Msa0045100:intron | 15.0% |
| !!! | CATATTTTAATTGAGAAAAT+TGG | - | chr1_1:76799854-76799873 | Msa0045100:intron | 15.0% |
| !!! | AAATATTTTGAATTCGATTT+GGG | + | chr1_1:76800013-76800032 | None:intergenic | 15.0% |
| !!! | AAAATATTTTGAATTCGATT+TGG | + | chr1_1:76800014-76800033 | None:intergenic | 15.0% |
| !!! | TTTTAATTTTCTGTTTACTT+TGG | - | chr1_1:76800359-76800378 | Msa0045100:intron | 15.0% |
| !! | CAAAAAAAGAATACATTATT+TGG | + | chr1_1:76801321-76801340 | None:intergenic | 15.0% |
| !!! | TATTTTACTTATTGAAAAAC+TGG | - | chr1_1:76801621-76801640 | Msa0045100:intron | 15.0% |
| !!! | ATTTTACTTATTGAAAAACT+GGG | - | chr1_1:76801622-76801641 | Msa0045100:intron | 15.0% |
| !!! | AAACTACATAAATTTAAAGT+AGG | - | chr1_1:76801657-76801676 | Msa0045100:intron | 15.0% |
| !! | TGATAATCTTAATTTAAATG+TGG | + | chr1_1:76801813-76801832 | None:intergenic | 15.0% |
| !! | TGTAAATCTATTGATATATT+GGG | - | chr1_1:76802593-76802612 | Msa0045100:intron | 15.0% |
| !!! | TAAACAGCATATATTTTTAT+GGG | + | chr1_1:76803794-76803813 | None:intergenic | 15.0% |
| !!! | ATAAACAGCATATATTTTTA+TGG | + | chr1_1:76803795-76803814 | None:intergenic | 15.0% |
| !!! | TTTAACTTGAAATTTTGTAT+TGG | - | chr1_1:76804101-76804120 | Msa0045100:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr1_1:76804355-76804374 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr1_1:76804354-76804373 | Msa0045100:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr1_1:76804378-76804397 | Msa0045100:intron | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | chr1_1:76804481-76804500 | Msa0045100:intron | 15.0% |
| !!! | TTTTAAAGATTACCAAATTA+AGG | + | chr1_1:76805845-76805864 | None:intergenic | 15.0% |
| !!! | AATTTTCTAAAAACGTTAAA+TGG | - | chr1_1:76806213-76806232 | Msa0045100:intron | 15.0% |
| !!! | TACTTCAATATTTTGTTTAA+TGG | - | chr1_1:76806262-76806281 | Msa0045100:intron | 15.0% |
| !!! | TTATAATTTTTTTAACAAGG+GGG | + | chr1_1:76806342-76806361 | None:intergenic | 15.0% |
| !! | GGTTAAGAAATAAAAATTAT+CGG | + | chr1_1:76806376-76806395 | None:intergenic | 15.0% |
| !!! | AGTAAATTTTGCTTATATTT+TGG | + | chr1_1:76807260-76807279 | None:intergenic | 15.0% |
| !!! | ATAAGCAAAATTTACTTTTT+AGG | - | chr1_1:76807264-76807283 | Msa0045100:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | chr1_1:76807362-76807381 | Msa0045100:intron | 15.0% |
| !! | ACATATATTTCTTAATCAAA+AGG | - | chr1_1:76807786-76807805 | Msa0045100:intron | 15.0% |
| !! | TTATATGTAAACTATCTTAT+TGG | - | chr1_1:76807945-76807964 | Msa0045100:intron | 15.0% |
| !!! | ATTTTCCTCAATATTATTAA+CGG | - | chr1_1:76808198-76808217 | Msa0045100:intron | 15.0% |
| !! | AGTATCTCAAAAACAAAAAT+AGG | + | chr1_1:76798966-76798985 | None:intergenic | 20.0% |
| !! | TCAACTAAAATACAAACTAT+CGG | + | chr1_1:76799033-76799052 | None:intergenic | 20.0% |
| !! | AAATTGTTAAAGTGTAAAGT+GGG | + | chr1_1:76799235-76799254 | None:intergenic | 20.0% |
| !!! | AATATTTTGAATTCGATTTG+GGG | + | chr1_1:76800012-76800031 | None:intergenic | 20.0% |
| !! | AATATACACCATATATGAAT+CGG | + | chr1_1:76800263-76800282 | None:intergenic | 20.0% |
| !! | TTCATATATGGTGTATATTT+AGG | - | chr1_1:76800264-76800283 | Msa0045100:CDS | 20.0% |
| !!! | ACTTATTGTTAAGGAAATTT+TGG | - | chr1_1:76800430-76800449 | Msa0045100:intron | 20.0% |
| !! | TTAGATGTAATCATCATTAA+AGG | - | chr1_1:76800617-76800636 | Msa0045100:CDS | 20.0% |
| !! | TAGATGTAATCATCATTAAA+GGG | - | chr1_1:76800618-76800637 | Msa0045100:CDS | 20.0% |
| !! | TCTAAACGAAAATATCATAA+GGG | + | chr1_1:76801390-76801409 | None:intergenic | 20.0% |
| !!! | ATCAATTTATTTCAAGTAGT+TGG | - | chr1_1:76802564-76802583 | Msa0045100:intron | 20.0% |
| !! | GTGTAAATCTATTGATATAT+TGG | - | chr1_1:76802592-76802611 | Msa0045100:intron | 20.0% |
| !!! | ATACATTTTTTTTTTTTCCC+TGG | + | chr1_1:76802897-76802916 | None:intergenic | 20.0% |
| !! | AAGTTTGAACACATTTAAAA+AGG | + | chr1_1:76802990-76803009 | None:intergenic | 20.0% |
| !! | AATAAAGAGACACATAATTT+AGG | + | chr1_1:76803122-76803141 | None:intergenic | 20.0% |
| !! | AGTTAAAATTTAGTCACAAA+GGG | + | chr1_1:76803273-76803292 | None:intergenic | 20.0% |
| !! | AAGTTAAAATTTAGTCACAA+AGG | + | chr1_1:76803274-76803293 | None:intergenic | 20.0% |
| !!! | TTGTGACTAAATTTTAACTT+CGG | - | chr1_1:76803274-76803293 | Msa0045100:intron | 20.0% |
| !! | AAACTATAAAATGACGTTAA+AGG | + | chr1_1:76803599-76803618 | None:intergenic | 20.0% |
| !! | CTTTATAATAACTATTGATC+AGG | - | chr1_1:76803624-76803643 | Msa0045100:intron | 20.0% |
| !! | TAACAGTTAATGCATTATTT+AGG | + | chr1_1:76803850-76803869 | None:intergenic | 20.0% |
| !! | TATCTTCTTTATCATTATCT+GGG | + | chr1_1:76803964-76803983 | None:intergenic | 20.0% |
| !! | TTATCTTCTTTATCATTATC+TGG | + | chr1_1:76803965-76803984 | None:intergenic | 20.0% |
| !! | TAAATTCTGCTTAGAAAAAA+GGG | - | chr1_1:76804179-76804198 | Msa0045100:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr1_1:76804321-76804340 | Msa0045100:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr1_1:76804364-76804383 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr1_1:76804441-76804460 | Msa0045100:intron | 20.0% |
| !! | TAAAAGTTCTTCCTTTAAAT+TGG | - | chr1_1:76804643-76804662 | Msa0045100:intron | 20.0% |
| !! | TAAAAGCAAAATGTTAAAGA+AGG | + | chr1_1:76804678-76804697 | None:intergenic | 20.0% |
| !! | GAAAAGAAATATTATCAGAT+AGG | - | chr1_1:76805305-76805324 | Msa0045100:intron | 20.0% |
| !! | AAATATTATCAGATAGGAAA+GGG | - | chr1_1:76805311-76805330 | Msa0045100:intron | 20.0% |
| !! | TACTCATATTACATAAAGTA+TGG | + | chr1_1:76805667-76805686 | None:intergenic | 20.0% |
| !! | TACTTTATGTAATATGAGTA+AGG | - | chr1_1:76805667-76805686 | Msa0045100:CDS | 20.0% |
| !!! | TTTGATTCTTCATTTTTCTT+TGG | - | chr1_1:76806021-76806040 | Msa0045100:intron | 20.0% |
| !!! | TTGATTCTTCATTTTTCTTT+GGG | - | chr1_1:76806022-76806041 | Msa0045100:intron | 20.0% |
| !! | TAAGAAATAAAAATTATCGG+AGG | + | chr1_1:76806373-76806392 | None:intergenic | 20.0% |
| !!! | TTTTCCTAATAAATTACAGT+TGG | + | chr1_1:76806589-76806608 | None:intergenic | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | + | chr1_1:76807353-76807372 | None:intergenic | 20.0% |
| !! | ATATAAAAGCAGTTAATTGT+TGG | - | chr1_1:76807414-76807433 | Msa0045100:intron | 20.0% |
| !! | TAAAAAAAGAAAACTACACA+GGG | + | chr1_1:76807928-76807947 | None:intergenic | 20.0% |
| !! | ATAAAAAAAGAAAACTACAC+AGG | + | chr1_1:76807929-76807948 | None:intergenic | 20.0% |
| ! | AACTAAAATACAAACTATCG+GGG | + | chr1_1:76799031-76799050 | None:intergenic | 25.0% |
| ! | CAACTAAAATACAAACTATC+GGG | + | chr1_1:76799032-76799051 | None:intergenic | 25.0% |
| ! | AAGATGACTAAAAGTGAATT+GGG | + | chr1_1:76799067-76799086 | None:intergenic | 25.0% |
| ! | AAAGATGACTAAAAGTGAAT+TGG | + | chr1_1:76799068-76799087 | None:intergenic | 25.0% |
| !!! | AGATCTTTTTGGCAAAATTA+GGG | + | chr1_1:76799165-76799184 | None:intergenic | 25.0% |
| !!! | AAGATCTTTTTGGCAAAATT+AGG | + | chr1_1:76799166-76799185 | None:intergenic | 25.0% |
| ! | CAAATTGTTAAAGTGTAAAG+TGG | + | chr1_1:76799236-76799255 | None:intergenic | 25.0% |
| ! | CACTTTACACTTTAACAATT+TGG | - | chr1_1:76799234-76799253 | Msa0045100:intron | 25.0% |
| !!! | GTTAATAAGATGGTTTTAGT+TGG | + | chr1_1:76799318-76799337 | None:intergenic | 25.0% |
| ! | TTAATTGAGAAAATTGGGTT+TGG | - | chr1_1:76799860-76799879 | Msa0045100:intron | 25.0% |
| !!! | TTTTAATTTTTGTGCTGAAG+TGG | - | chr1_1:76799904-76799923 | Msa0045100:intron | 25.0% |
| ! | AATAAACAAAAGGAAGAAAG+AGG | + | chr1_1:76800339-76800358 | None:intergenic | 25.0% |
| ! | GGATGATATACTTATTGTTA+AGG | - | chr1_1:76800421-76800440 | Msa0045100:intron | 25.0% |
| ! | AATTAGATATCAGTTGCTAA+AGG | - | chr1_1:76800518-76800537 | Msa0045100:intron | 25.0% |
| ! | ATTCCTAGATATGAGAAAAT+GGG | + | chr1_1:76800557-76800576 | None:intergenic | 25.0% |
| ! | TATTCCTAGATATGAGAAAA+TGG | + | chr1_1:76800558-76800577 | None:intergenic | 25.0% |
| ! | TTCCACAGATTTCAAATAAT+AGG | + | chr1_1:76800592-76800611 | None:intergenic | 25.0% |
| ! | TTCATGTTTGTTCTTTAGTT+TGG | - | chr1_1:76800784-76800803 | Msa0045100:intron | 25.0% |
| !! | AGATTGATACAAGAGTATAA+TGG | + | chr1_1:76800941-76800960 | None:intergenic | 25.0% |
| ! | TTGAGATTCATATAACCTAA+GGG | + | chr1_1:76801028-76801047 | None:intergenic | 25.0% |
| ! | ATTGAGATTCATATAACCTA+AGG | + | chr1_1:76801029-76801048 | None:intergenic | 25.0% |
| ! | TGATAGTTTACATACTGAAT+GGG | - | chr1_1:76801052-76801071 | Msa0045100:intron | 25.0% |
| !! | TATGCATAATATTTTGTCAC+AGG | - | chr1_1:76801076-76801095 | Msa0045100:intron | 25.0% |
| !! | ATGCATAATATTTTGTCACA+GGG | - | chr1_1:76801077-76801096 | Msa0045100:intron | 25.0% |
| !!! | AATTCCTGCTAAATTTTGAT+GGG | - | chr1_1:76801126-76801145 | Msa0045100:intron | 25.0% |
| ! | TTACACATAGAATATACAGA+GGG | + | chr1_1:76801259-76801278 | None:intergenic | 25.0% |
| ! | ATTACACATAGAATATACAG+AGG | + | chr1_1:76801260-76801279 | None:intergenic | 25.0% |
| ! | GTCTAAACGAAAATATCATA+AGG | + | chr1_1:76801391-76801410 | None:intergenic | 25.0% |
| ! | ATCGAATCTAATCTATCAAA+AGG | + | chr1_1:76801560-76801579 | None:intergenic | 25.0% |
| ! | ATACTTAACAGTAAGACAAA+CGG | + | chr1_1:76801604-76801623 | None:intergenic | 25.0% |
| !! | CTACATAAATTTAAAGTAGG+CGG | - | chr1_1:76801660-76801679 | Msa0045100:intron | 25.0% |
| ! | CATGAAATATATAAAGAGAC+TGG | + | chr1_1:76801941-76801960 | None:intergenic | 25.0% |
| ! | AAAGAAATTGTTGTAGATGA+AGG | + | chr1_1:76802052-76802071 | None:intergenic | 25.0% |
| !! | TATGATTTTTCTCTGAACTT+TGG | - | chr1_1:76802174-76802193 | Msa0045100:CDS | 25.0% |
| !! | TCATTGACTAGTAAATTGAA+AGG | + | chr1_1:76802229-76802248 | None:intergenic | 25.0% |
| ! | TCTTTATTACTGTTTGTTCT+TGG | - | chr1_1:76802263-76802282 | Msa0045100:intron | 25.0% |
| ! | AACAAGTTGTTTAATAGCAT+TGG | - | chr1_1:76802538-76802557 | Msa0045100:intron | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr1_1:76802819-76802838 | None:intergenic | 25.0% |
| !!! | TAGGCAACTTTTTACTTTTT+AGG | + | chr1_1:76802844-76802863 | None:intergenic | 25.0% |
| !! | AAAATCACACATTTTAGATC+AGG | + | chr1_1:76802934-76802953 | None:intergenic | 25.0% |
| ! | AATACCATAAGTTATCAACA+CGG | + | chr1_1:76803075-76803094 | None:intergenic | 25.0% |
| ! | TTGACAATCTCTTGATATTT+GGG | + | chr1_1:76803316-76803335 | None:intergenic | 25.0% |
| ! | ATTGACAATCTCTTGATATT+TGG | + | chr1_1:76803317-76803336 | None:intergenic | 25.0% |
| ! | AATCTTATTATGCATGCTTA+AGG | + | chr1_1:76803419-76803438 | None:intergenic | 25.0% |
| ! | TGTCTTATCTCAATGAAATT+TGG | - | chr1_1:76803815-76803834 | Msa0045100:intron | 25.0% |
| ! | CTAAATTCTGCTTAGAAAAA+AGG | - | chr1_1:76804178-76804197 | Msa0045100:intron | 25.0% |
| ! | AAATTCTGCTTAGAAAAAAG+GGG | - | chr1_1:76804180-76804199 | Msa0045100:intron | 25.0% |
| ! | TTGAAATTCTAGTAATCACA+TGG | - | chr1_1:76804218-76804237 | Msa0045100:intron | 25.0% |
| ! | TCAATTCAATAACCAATACT+TGG | + | chr1_1:76804621-76804640 | None:intergenic | 25.0% |
| !!! | TTCCTTTAAATTGGTTTTCT+TGG | - | chr1_1:76804652-76804671 | Msa0045100:intron | 25.0% |
| !!! | ACATTTTGCTTTTACTATAG+TGG | - | chr1_1:76804684-76804703 | Msa0045100:intron | 25.0% |
| !! | TGGATTTTTCTTATTGATGA+TGG | - | chr1_1:76805278-76805297 | Msa0045100:intron | 25.0% |
| ! | GAAATATTATCAGATAGGAA+AGG | - | chr1_1:76805310-76805329 | Msa0045100:intron | 25.0% |
| ! | AATATTATCAGATAGGAAAG+GGG | - | chr1_1:76805312-76805331 | Msa0045100:intron | 25.0% |
| ! | ATAATGATTAATACGTCAGT+AGG | + | chr1_1:76805487-76805506 | None:intergenic | 25.0% |
| ! | TTTATGTAATATGAGTAAGG+TGG | - | chr1_1:76805670-76805689 | Msa0045100:CDS | 25.0% |
| ! | TTACAAATCTTGATTTATGC+AGG | - | chr1_1:76805699-76805718 | Msa0045100:CDS | 25.0% |
| ! | TACAAATCTTGATTTATGCA+GGG | - | chr1_1:76805700-76805719 | Msa0045100:CDS | 25.0% |
| ! | GATTACCAAATTAAGGAAAA+GGG | + | chr1_1:76805838-76805857 | None:intergenic | 25.0% |
| ! | AGATTACCAAATTAAGGAAA+AGG | + | chr1_1:76805839-76805858 | None:intergenic | 25.0% |
| ! | AACCAAAATTACCAGAATAA+GGG | + | chr1_1:76805894-76805913 | None:intergenic | 25.0% |
| ! | AAACCAAAATTACCAGAATA+AGG | + | chr1_1:76805895-76805914 | None:intergenic | 25.0% |
| ! | AATAAATGTCTCATAATGCT+TGG | - | chr1_1:76805974-76805993 | Msa0045100:intron | 25.0% |
| !!! | TGATTCTTCATTTTTCTTTG+GGG | - | chr1_1:76806023-76806042 | Msa0045100:intron | 25.0% |
| !!! | ATACTAGTTCTACATTAAGA+TGG | + | chr1_1:76806140-76806159 | None:intergenic | 25.0% |
| ! | CTTAATGTAGAACTAGTATT+TGG | - | chr1_1:76806141-76806160 | Msa0045100:intron | 25.0% |
| ! | TGTACCAACTGTAATTTATT+AGG | - | chr1_1:76806582-76806601 | Msa0045100:intron | 25.0% |
| ! | TAAAGAAAAATACAGGAGAA+TGG | + | chr1_1:76806661-76806680 | None:intergenic | 25.0% |
| !! | AATCCTCTAAAGAAAAATAC+AGG | + | chr1_1:76806668-76806687 | None:intergenic | 25.0% |
| ! | ATTACTTCATTACCATCATT+TGG | + | chr1_1:76806953-76806972 | None:intergenic | 25.0% |
| !! | ATGAATTTTGTCTTCTGTTT+TGG | - | chr1_1:76806971-76806990 | Msa0045100:intron | 25.0% |
| ! | TGATCTTACCAGATATATTA+CGG | - | chr1_1:76807073-76807092 | Msa0045100:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr1_1:76807289-76807308 | Msa0045100:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr1_1:76807289-76807308 | None:intergenic | 25.0% |
| !! | TTGTGTTATATAATGGGATT+CGG | - | chr1_1:76807438-76807457 | Msa0045100:intron | 25.0% |
| !! | TTCAATTCTCTTTCTTTTCT+TGG | - | chr1_1:76807497-76807516 | Msa0045100:intron | 25.0% |
| !! | CAATTTTCATTGATACATCA+AGG | - | chr1_1:76807551-76807570 | Msa0045100:intron | 25.0% |
| ! | TACAACCGTTAATAATATTG+AGG | + | chr1_1:76808206-76808225 | None:intergenic | 25.0% |
| ! | ATATTATTAACGGTTGTATC+TGG | - | chr1_1:76808208-76808227 | Msa0045100:intron | 25.0% |
| !! | TCAAGGTGCAATTTTGAAAA+TGG | - | chr1_1:76799101-76799120 | Msa0045100:intron | 30.0% |
| AAATATTACTCTGTTCTGTC+TGG | + | chr1_1:76799134-76799153 | None:intergenic | 30.0% | |
| !! | GATCTTTTTGGCAAAATTAG+GGG | + | chr1_1:76799164-76799183 | None:intergenic | 30.0% |
| ! | ATCTTTTCTTCACCTATCTT+GGG | + | chr1_1:76799210-76799229 | None:intergenic | 30.0% |
| ! | AATCTTTTCTTCACCTATCT+TGG | + | chr1_1:76799211-76799230 | None:intergenic | 30.0% |
| CTCAAAAAGAAAACGAATAG+TGG | + | chr1_1:76799273-76799292 | None:intergenic | 30.0% | |
| ! | TCTCTCGATGCATTTTTATT+TGG | - | chr1_1:76799594-76799613 | Msa0045100:intron | 30.0% |
| AAAAGCAAAGTTGAAGAACA+AGG | + | chr1_1:76799659-76799678 | None:intergenic | 30.0% | |
| CTTAGAGAATTAGAGATTGT+TGG | - | chr1_1:76799682-76799701 | Msa0045100:intron | 30.0% | |
| CAGTATTTGAGTAACATAAC+CGG | + | chr1_1:76800168-76800187 | None:intergenic | 30.0% | |
| !!! | ACATTTTTTCTGTCTCATTC+TGG | - | chr1_1:76800301-76800320 | Msa0045100:CDS | 30.0% |
| TGTATGACGTAAATTGATGT+TGG | - | chr1_1:76800385-76800404 | Msa0045100:intron | 30.0% | |
| !! | GATGTTGGTAATTTACACAA+CGG | - | chr1_1:76800400-76800419 | Msa0045100:intron | 30.0% |
| ATGAGAAAATGGGAGAAAAA+AGG | + | chr1_1:76800547-76800566 | None:intergenic | 30.0% | |
| ! | GTCCTATTATTTGAAATCTG+TGG | - | chr1_1:76800587-76800606 | Msa0045100:CDS | 30.0% |
| !!! | ATAGACTTTTAGCTCATCTT+GGG | - | chr1_1:76800729-76800748 | Msa0045100:intron | 30.0% |
| !! | ATGTTTGTTCTTTAGTTTGG+TGG | - | chr1_1:76800787-76800806 | Msa0045100:intron | 30.0% |
| ! | TAAACTAGGCTTTGTAAACA+TGG | + | chr1_1:76800857-76800876 | None:intergenic | 30.0% |
| CTGATAGTTTACATACTGAA+TGG | - | chr1_1:76801051-76801070 | Msa0045100:intron | 30.0% | |
| GATAGTTTACATACTGAATG+GGG | - | chr1_1:76801053-76801072 | Msa0045100:intron | 30.0% | |
| ! | TTTGTCACAGGGATTTTAAA+TGG | - | chr1_1:76801088-76801107 | Msa0045100:intron | 30.0% |
| ! | TTGTCACAGGGATTTTAAAT+GGG | - | chr1_1:76801089-76801108 | Msa0045100:intron | 30.0% |
| CAAAATTTAGCAGGAATTGA+GGG | + | chr1_1:76801124-76801143 | None:intergenic | 30.0% | |
| TCAAAATTTAGCAGGAATTG+AGG | + | chr1_1:76801125-76801144 | None:intergenic | 30.0% | |
| ! | CAATTCCTGCTAAATTTTGA+TGG | - | chr1_1:76801125-76801144 | Msa0045100:intron | 30.0% |
| !! | ATTCCTGCTAAATTTTGATG+GGG | - | chr1_1:76801127-76801146 | Msa0045100:intron | 30.0% |
| TACACATAGAATATACAGAG+GGG | + | chr1_1:76801258-76801277 | None:intergenic | 30.0% | |
| ATGAAATCACTTGCAAAAGA+TGG | + | chr1_1:76801465-76801484 | None:intergenic | 30.0% | |
| ! | CTTTTGCAAGTGATTTCATA+CGG | - | chr1_1:76801466-76801485 | Msa0045100:intron | 30.0% |
| !! | GTGGTTATCATCTTTAGTTT+TGG | + | chr1_1:76801794-76801813 | None:intergenic | 30.0% |
| GTCATCATTATCTTATGTGA+TGG | - | chr1_1:76801843-76801862 | Msa0045100:intron | 30.0% | |
| TAAATGCAAGCGATAAGAAA+AGG | + | chr1_1:76802026-76802045 | None:intergenic | 30.0% | |
| ! | ATTTCTTTTCCTATGCAACT+AGG | - | chr1_1:76802064-76802083 | Msa0045100:CDS | 30.0% |
| TGTAAATCAATTGTTGTACC+AGG | - | chr1_1:76802087-76802106 | Msa0045100:CDS | 30.0% | |
| GTAAATCAATTGTTGTACCA+GGG | - | chr1_1:76802088-76802107 | Msa0045100:CDS | 30.0% | |
| ! | GCACATTTTCTATAACTTCT+TGG | + | chr1_1:76802388-76802407 | None:intergenic | 30.0% |
| !! | AATTCTAGAGTGATATACCA+AGG | + | chr1_1:76802424-76802443 | None:intergenic | 30.0% |
| ! | TTATTTCAAGTAGTTGGACT+AGG | - | chr1_1:76802570-76802589 | Msa0045100:intron | 30.0% |
| GATGTATGTGGTCTATAATA+TGG | + | chr1_1:76802807-76802826 | None:intergenic | 30.0% | |
| GATAACTTATGGTATTCGTT+TGG | - | chr1_1:76803079-76803098 | Msa0045100:intron | 30.0% | |
| GAGATTGTCAATATTCGTTT+AGG | - | chr1_1:76803325-76803344 | Msa0045100:intron | 30.0% | |
| ACTATTGATCAGGTATTTGA+AGG | - | chr1_1:76803634-76803653 | Msa0045100:intron | 30.0% | |
| CTCAATGAAATTTGGATTAC+AGG | - | chr1_1:76803823-76803842 | Msa0045100:intron | 30.0% | |
| TTCTTTATCATTATCTGGGA+CGG | + | chr1_1:76803960-76803979 | None:intergenic | 30.0% | |
| TTGCATGTCATCTTGATTAA+TGG | - | chr1_1:76804045-76804064 | Msa0045100:intron | 30.0% | |
| ATACATGTAAACCTAGAAAC+TGG | - | chr1_1:76804152-76804171 | Msa0045100:intron | 30.0% | |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr1_1:76804272-76804291 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr1_1:76804273-76804292 | Msa0045100:intron | 30.0% |
| GTTAAAAACTCCTGTATCAT+TGG | - | chr1_1:76804764-76804783 | Msa0045100:CDS | 30.0% | |
| ACTGCATGTTTGTTTATTTC+TGG | - | chr1_1:76804882-76804901 | Msa0045100:intron | 30.0% | |
| ! | CTCTTGAATTGTATGACTTT+TGG | - | chr1_1:76805229-76805248 | Msa0045100:intron | 30.0% |
| ATTGTGATCTGTGTTTCATT+TGG | - | chr1_1:76805258-76805277 | Msa0045100:intron | 30.0% | |
| !! | TTTGACTACTTTTGTAAAGG+CGG | + | chr1_1:76805388-76805407 | None:intergenic | 30.0% |
| !! | TGGTTTGACTACTTTTGTAA+AGG | + | chr1_1:76805391-76805410 | None:intergenic | 30.0% |
| !!! | ATAGCATTGTGCTTGTTTTA+TGG | + | chr1_1:76805411-76805430 | None:intergenic | 30.0% |
| TATAAGCAATATCACAAGTG+AGG | + | chr1_1:76805567-76805586 | None:intergenic | 30.0% | |
| TCTTATTGCCTTAGATTAAG+CGG | - | chr1_1:76805602-76805621 | Msa0045100:intron | 30.0% | |
| AAAATAGACCGCTTAATCTA+AGG | + | chr1_1:76805613-76805632 | None:intergenic | 30.0% | |
| ACAAATCTTGATTTATGCAG+GGG | - | chr1_1:76805701-76805720 | Msa0045100:CDS | 30.0% | |
| ACCAAAATTACCAGAATAAG+GGG | + | chr1_1:76805893-76805912 | None:intergenic | 30.0% | |
| !! | TTTTTCCTTTCCAGTATTGA+TGG | - | chr1_1:76805927-76805946 | Msa0045100:intron | 30.0% |
| !! | TTCATTTTTCTTTGGGGATT+GGG | - | chr1_1:76806029-76806048 | Msa0045100:intron | 30.0% |
| !!! | GGATCAACATATTGTTTTTG+AGG | - | chr1_1:76806283-76806302 | Msa0045100:intron | 30.0% |
| ! | ATGTCTGTACAATTGCTATT+GGG | - | chr1_1:76806406-76806425 | Msa0045100:intron | 30.0% |
| AGAATGGTAAACACAGTAAA+AGG | + | chr1_1:76806645-76806664 | None:intergenic | 30.0% | |
| ! | TCTCCTGTATTTTTCTTTAG+AGG | - | chr1_1:76806662-76806681 | Msa0045100:intron | 30.0% |
| AGATCTGTATACATATAACC+AGG | + | chr1_1:76806854-76806873 | None:intergenic | 30.0% | |
| CATGGTTAGAATTGGAATTT+GGG | + | chr1_1:76806930-76806949 | None:intergenic | 30.0% | |
| !! | TGTCTTCTGTTTTGGATAAA+AGG | - | chr1_1:76806979-76806998 | Msa0045100:intron | 30.0% |
| GTAATATATCTGGTAAGATC+AGG | + | chr1_1:76807074-76807093 | None:intergenic | 30.0% | |
| TGCATTATTACGAGAGAATT+TGG | - | chr1_1:76807197-76807216 | Msa0045100:intron | 30.0% | |
| !!! | TGCTTATATTTTGGAACAGA+GGG | + | chr1_1:76807251-76807270 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGGAACAG+AGG | + | chr1_1:76807252-76807271 | None:intergenic | 30.0% |
| GATGTATGTGGTTCATAATA+TGG | + | chr1_1:76807316-76807335 | None:intergenic | 30.0% | |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | chr1_1:76807365-76807384 | Msa0045100:intron | 30.0% |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | chr1_1:76807366-76807385 | Msa0045100:intron | 30.0% |
| !! | TGTTGGCTTGTGTTATATAA+TGG | - | chr1_1:76807431-76807450 | Msa0045100:intron | 30.0% |
| !! | GTTGGCTTGTGTTATATAAT+GGG | - | chr1_1:76807432-76807451 | Msa0045100:intron | 30.0% |
| !! | GGTATTCTCTCTGAAAATTT+TGG | - | chr1_1:76807459-76807478 | Msa0045100:intron | 30.0% |
| CAGGGATCATATATATTTCA+TGG | + | chr1_1:76807584-76807603 | None:intergenic | 30.0% | |
| CAATCTCATACAATTCATCA+GGG | + | chr1_1:76807602-76807621 | None:intergenic | 30.0% | |
| TAATGCTTAGAATGTTTACC+AGG | + | chr1_1:76807646-76807665 | None:intergenic | 30.0% | |
| ! | TTTCTTAATCAAAAGGTGTG+TGG | - | chr1_1:76807793-76807812 | Msa0045100:intron | 30.0% |
| ACACTCTAATGATGTATCAT+TGG | - | chr1_1:76807819-76807838 | Msa0045100:intron | 30.0% | |
| TCAAAATTGCACCTTGAATG+CGG | + | chr1_1:76799098-76799117 | None:intergenic | 35.0% | |
| ! | CGCTTGTTTCAAGATCTTTT+TGG | + | chr1_1:76799176-76799195 | None:intergenic | 35.0% |
| AAACGAATAGTGGTTCATTC+TGG | + | chr1_1:76799263-76799282 | None:intergenic | 35.0% | |
| !!! | GGTTTTGAGGGTTAATAAGA+TGG | + | chr1_1:76799328-76799347 | None:intergenic | 35.0% |
| GAACTGTAGAAAAACAGTAC+CGG | + | chr1_1:76799511-76799530 | None:intergenic | 35.0% | |
| TCGAGAGAAGAAACGAAAAA+GGG | + | chr1_1:76799582-76799601 | None:intergenic | 35.0% | |
| ATCGAGAGAAGAAACGAAAA+AGG | + | chr1_1:76799583-76799602 | None:intergenic | 35.0% | |
| AGAGAATTAGAGATTGTTGG+TGG | - | chr1_1:76799685-76799704 | Msa0045100:intron | 35.0% | |
| AACATTTAGCAAACAAGCAC+CGG | + | chr1_1:76799798-76799817 | None:intergenic | 35.0% | |
| AAGCTATCATGTAGAACTTG+TGG | - | chr1_1:76800046-76800065 | Msa0045100:CDS | 35.0% | |
| !! | AGAAGCATTTGAATTTCGCA+GGG | + | chr1_1:76800140-76800159 | None:intergenic | 35.0% |
| !! | AAGAAGCATTTGAATTTCGC+AGG | + | chr1_1:76800141-76800160 | None:intergenic | 35.0% |
| ATTCAAATGCTTCTTCTCTC+CGG | - | chr1_1:76800146-76800165 | Msa0045100:intron | 35.0% | |
| ATTGTATGCTAGACACTTAG+GGG | + | chr1_1:76800216-76800235 | None:intergenic | 35.0% | |
| GATTGTATGCTAGACACTTA+GGG | + | chr1_1:76800217-76800236 | None:intergenic | 35.0% | |
| AGATTGTATGCTAGACACTT+AGG | + | chr1_1:76800218-76800237 | None:intergenic | 35.0% | |
| CGGTGAAGTCTAAGAAATAA+AGG | + | chr1_1:76800243-76800262 | None:intergenic | 35.0% | |
| !! | AGACTTCACCGATTCATATA+TGG | - | chr1_1:76800252-76800271 | Msa0045100:CDS | 35.0% |
| !! | GTTAAGGAAATTTTGGTCTC+TGG | - | chr1_1:76800437-76800456 | Msa0045100:intron | 35.0% |
| TAGATATCAGTTGCTAAAGG+TGG | - | chr1_1:76800521-76800540 | Msa0045100:intron | 35.0% | |
| ! | TCTCCCATTTTCTCATATCT+AGG | - | chr1_1:76800551-76800570 | Msa0045100:intron | 35.0% |
| !!! | TGGGGCATATTCGTTTTTTT+GGG | + | chr1_1:76800648-76800667 | None:intergenic | 35.0% |
| !!! | ATGGGGCATATTCGTTTTTT+TGG | + | chr1_1:76800649-76800668 | None:intergenic | 35.0% |
| ! | TGATGATAATTTGTGGCGAA+AGG | + | chr1_1:76800678-76800697 | None:intergenic | 35.0% |
| !! | GCTGGTTTGATGATAATTTG+TGG | + | chr1_1:76800685-76800704 | None:intergenic | 35.0% |
| TCTATCCATGGTAAATGAGT+GGG | + | chr1_1:76800714-76800733 | None:intergenic | 35.0% | |
| ATGAGCTAAAAGTCTATCCA+TGG | + | chr1_1:76800726-76800745 | None:intergenic | 35.0% | |
| !!! | GATAGACTTTTAGCTCATCT+TGG | - | chr1_1:76800728-76800747 | Msa0045100:intron | 35.0% |
| !! | AGGCTTTGTAAACATGGTTT+TGG | + | chr1_1:76800851-76800870 | None:intergenic | 35.0% |
| ACAAAGCCTAGTTTACAACT+TGG | - | chr1_1:76800862-76800881 | Msa0045100:intron | 35.0% | |
| CAAAGCCTAGTTTACAACTT+GGG | - | chr1_1:76800863-76800882 | Msa0045100:intron | 35.0% | |
| TAGATCCCAAGTTGTAAACT+AGG | + | chr1_1:76800871-76800890 | None:intergenic | 35.0% | |
| GGGAAAGTGAAAGAGAAATA+GGG | + | chr1_1:76801008-76801027 | None:intergenic | 35.0% | |
| AGGGAAAGTGAAAGAGAAAT+AGG | + | chr1_1:76801009-76801028 | None:intergenic | 35.0% | |
| TTTCTCTTTCACTTTCCCTT+AGG | - | chr1_1:76801010-76801029 | Msa0045100:intron | 35.0% | |
| TCAACAGTTGCTAAAGTAAG+AGG | - | chr1_1:76801980-76801999 | Msa0045100:intron | 35.0% | |
| CAACAGTTGCTAAAGTAAGA+GGG | - | chr1_1:76801981-76802000 | Msa0045100:intron | 35.0% | |
| TGATTTACACCTAGTTGCAT+AGG | + | chr1_1:76802076-76802095 | None:intergenic | 35.0% | |
| ! | TTTTGTTGATACAGAGAGCT+TGG | - | chr1_1:76802330-76802349 | Msa0045100:CDS | 35.0% |
| GTGCAACATACATTTAACCT+TGG | - | chr1_1:76802404-76802423 | Msa0045100:intron | 35.0% | |
| AAGTCTAAATGTATGCAGCT+GGG | + | chr1_1:76802462-76802481 | None:intergenic | 35.0% | |
| TAATTTCATAGCACGTAGCT+GGG | + | chr1_1:76802519-76802538 | None:intergenic | 35.0% | |
| TTAATTTCATAGCACGTAGC+TGG | + | chr1_1:76802520-76802539 | None:intergenic | 35.0% | |
| ! | ATGTTGCTTACATTTGAGAC+CGG | + | chr1_1:76802745-76802764 | None:intergenic | 35.0% |
| !! | CAATCCGTGTTGATAACTTA+TGG | - | chr1_1:76803068-76803087 | Msa0045100:intron | 35.0% |
| ACTTTCTCAAGAATGACCAA+TGG | + | chr1_1:76803184-76803203 | None:intergenic | 35.0% | |
| GGTCATTCTTGAGAAAGTTA+AGG | - | chr1_1:76803186-76803205 | Msa0045100:intron | 35.0% | |
| ! | AGGTATTTGAAGGTACATCT+GGG | - | chr1_1:76803644-76803663 | Msa0045100:intron | 35.0% |
| TTTACGACCATACAGTTTAC+TGG | - | chr1_1:76803679-76803698 | Msa0045100:intron | 35.0% | |
| AAAACACATAATTGAGCCGA+TGG | - | chr1_1:76803902-76803921 | Msa0045100:intron | 35.0% | |
| ! | GAATTTAGCTTCCAGTTTCT+AGG | + | chr1_1:76804166-76804185 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr1_1:76804403-76804422 | Msa0045100:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr1_1:76804407-76804426 | Msa0045100:intron | 35.0% |
| !!! | GACACTCATTTTGAAACAGA+GGG | - | chr1_1:76804511-76804530 | Msa0045100:intron | 35.0% |
| !! | GAGTGTTAATTTGTTCTGGA+GGG | - | chr1_1:76804533-76804552 | Msa0045100:intron | 35.0% |
| !! | AGTGTTAATTTGTTCTGGAG+GGG | - | chr1_1:76804534-76804553 | Msa0045100:intron | 35.0% |
| AATACTTGGCTAAATTGCAG+AGG | + | chr1_1:76804607-76804626 | None:intergenic | 35.0% | |
| TCTGCAATTTAGCCAAGTAT+TGG | - | chr1_1:76804606-76804625 | Msa0045100:intron | 35.0% | |
| GGCCAAGAAAACCAATTTAA+AGG | + | chr1_1:76804657-76804676 | None:intergenic | 35.0% | |
| ! | ACAGGAGTTTTTAACACCTA+CGG | + | chr1_1:76804759-76804778 | None:intergenic | 35.0% |
| ! | TGGAAAACCAATTTTACTCG+AGG | - | chr1_1:76804815-76804834 | Msa0045100:intron | 35.0% |
| AAGTAAGCCTCGAGTAAAAT+TGG | + | chr1_1:76804825-76804844 | None:intergenic | 35.0% | |
| ! | AATTTTACTCGAGGCTTACT+TGG | - | chr1_1:76804824-76804843 | Msa0045100:intron | 35.0% |
| GTCATGAATTCTATTGCTAG+AGG | - | chr1_1:76805017-76805036 | Msa0045100:intron | 35.0% | |
| TGTGCAGCAATTTCATTATG+GGG | + | chr1_1:76805077-76805096 | None:intergenic | 35.0% | |
| CTGTGCAGCAATTTCATTAT+GGG | + | chr1_1:76805078-76805097 | None:intergenic | 35.0% | |
| TCTGTGCAGCAATTTCATTA+TGG | + | chr1_1:76805079-76805098 | None:intergenic | 35.0% | |
| GAAGTCTGATAATCTTCTTG+AGG | - | chr1_1:76805133-76805152 | Msa0045100:intron | 35.0% | |
| GGGGAATAAAAAATGCGATA+AGG | - | chr1_1:76805331-76805350 | Msa0045100:intron | 35.0% | |
| AATACGTCAGTAGGAACAAA+GGG | + | chr1_1:76805478-76805497 | None:intergenic | 35.0% | |
| TAATACGTCAGTAGGAACAA+AGG | + | chr1_1:76805479-76805498 | None:intergenic | 35.0% | |
| ATTCATGTCAGTTTCTTCAC+AGG | + | chr1_1:76805532-76805551 | None:intergenic | 35.0% | |
| CAAATCTTGATTTATGCAGG+GGG | - | chr1_1:76805702-76805721 | Msa0045100:CDS | 35.0% | |
| !!! | GTTTTTTAAGCGTGACTTTG+AGG | - | chr1_1:76805788-76805807 | Msa0045100:intron | 35.0% |
| ! | AGTGACCCTTTTCCTTAATT+TGG | - | chr1_1:76805830-76805849 | Msa0045100:intron | 35.0% |
| TCTTTAATTCCCCCTTATTC+TGG | - | chr1_1:76805880-76805899 | Msa0045100:intron | 35.0% | |
| CCAAAATTACCAGAATAAGG+GGG | + | chr1_1:76805892-76805911 | None:intergenic | 35.0% | |
| TTCAACCATCAATACTGGAA+AGG | + | chr1_1:76805935-76805954 | None:intergenic | 35.0% | |
| !! | TTCCAGTATTGATGGTTGAA+TGG | - | chr1_1:76805935-76805954 | Msa0045100:intron | 35.0% |
| !! | CTTCATTTTTCTTTGGGGAT+TGG | - | chr1_1:76806028-76806047 | Msa0045100:intron | 35.0% |
| !! | TCATTTTTCTTTGGGGATTG+GGG | - | chr1_1:76806030-76806049 | Msa0045100:intron | 35.0% |
| !! | ACTTCACATGTGTTTGGTTT+TGG | + | chr1_1:76806175-76806194 | None:intergenic | 35.0% |
| TGTACAGACATGTAAGAAAC+AGG | + | chr1_1:76806397-76806416 | None:intergenic | 35.0% | |
| CATGTCTGTACAATTGCTAT+TGG | - | chr1_1:76806405-76806424 | Msa0045100:intron | 35.0% | |
| ! | TTGCTATTGGGATTTACTGT+AGG | - | chr1_1:76806418-76806437 | Msa0045100:intron | 35.0% |
| TCTTACTACTGCTGAATATC+TGG | - | chr1_1:76806484-76806503 | Msa0045100:intron | 35.0% | |
| ! | GAATATCTGGCTTATGAATG+TGG | - | chr1_1:76806497-76806516 | Msa0045100:intron | 35.0% |
| GCAACAATTTATGAACATGC+CGG | - | chr1_1:76806875-76806894 | Msa0045100:intron | 35.0% | |
| GCATGGTTAGAATTGGAATT+TGG | + | chr1_1:76806931-76806950 | None:intergenic | 35.0% | |
| TCATTTGGCATGGTTAGAAT+TGG | + | chr1_1:76806938-76806957 | None:intergenic | 35.0% | |
| ATTCTAACCATGCCAAATGA+TGG | - | chr1_1:76806938-76806957 | Msa0045100:intron | 35.0% | |
| TTCATTACCATCATTTGGCA+TGG | + | chr1_1:76806948-76806967 | None:intergenic | 35.0% | |
| TCTTACCAGATATATTACGG+AGG | - | chr1_1:76807076-76807095 | Msa0045100:intron | 35.0% | |
| CTTACCAGATATATTACGGA+GGG | - | chr1_1:76807077-76807096 | Msa0045100:intron | 35.0% | |
| AACTAATCCAACATGGCTTA+TGG | + | chr1_1:76807175-76807194 | None:intergenic | 35.0% | |
| ATGCAGTAACTAATCCAACA+TGG | + | chr1_1:76807182-76807201 | None:intergenic | 35.0% | |
| CCAATCTCATACAATTCATC+AGG | + | chr1_1:76807603-76807622 | None:intergenic | 35.0% | |
| CCTGATGAATTGTATGAGAT+TGG | - | chr1_1:76807600-76807619 | Msa0045100:intron | 35.0% | |
| ! | ATGGAAGAACATTGATTGGT+GGG | + | chr1_1:76807702-76807721 | None:intergenic | 35.0% |
| ! | AGTGATGGAAGAACATTGAT+TGG | + | chr1_1:76807706-76807725 | None:intergenic | 35.0% |
| ATGTTCTTCCATCACTATCT+CGG | - | chr1_1:76807710-76807729 | Msa0045100:CDS | 35.0% | |
| GATTTCAAAGTTCTGTCAAG+TGG | - | chr1_1:76807760-76807779 | Msa0045100:intron | 35.0% | |
| AGAGAAAATTAGTAGATGCC+AGG | + | chr1_1:76808108-76808127 | None:intergenic | 35.0% | |
| TAGTGAAATTGTCCTTGAAG+TGG | - | chr1_1:76808160-76808179 | Msa0045100:intron | 35.0% | |
| AGTGAAATTGTCCTTGAAGT+GGG | - | chr1_1:76808161-76808180 | Msa0045100:intron | 35.0% | |
| CTTCATTAATACCCACTTCA+AGG | + | chr1_1:76808175-76808194 | None:intergenic | 35.0% | |
| ! | AATTTCTGGACAAGTTTGAG+AGG | - | chr1_1:76808231-76808250 | Msa0045100:intron | 35.0% |
| TAGAGACTGGAATATATTGC+AGG | + | chr1_1:76808285-76808304 | None:intergenic | 35.0% | |
| GATCTTCCTAAACCCAAGAT+AGG | - | chr1_1:76799195-76799214 | Msa0045100:intron | 40.0% | |
| TCTTCACCTATCTTGGGTTT+AGG | + | chr1_1:76799204-76799223 | None:intergenic | 40.0% | |
| TGAGACGTTAACCTTTAACC+TGG | - | chr1_1:76799289-76799308 | Msa0045100:intron | 40.0% | |
| ! | TTAGTTGGTGTCCAGGTTAA+AGG | + | chr1_1:76799303-76799322 | None:intergenic | 40.0% |
| TCGATTGAGAAGAAAACGAC+GGG | + | chr1_1:76799464-76799483 | None:intergenic | 40.0% | |
| CTCGATTGAGAAGAAAACGA+CGG | + | chr1_1:76799465-76799484 | None:intergenic | 40.0% | |
| !!! | TTGTTTTGAATAGCTCCCTC+CGG | - | chr1_1:76799776-76799795 | Msa0045100:intron | 40.0% |
| !! | TGCCACATTTGAGCTGATTT+TGG | - | chr1_1:76799931-76799950 | Msa0045100:intron | 40.0% |
| CACCAAAATCAGCTCAAATG+TGG | + | chr1_1:76799936-76799955 | None:intergenic | 40.0% | |
| CTGGATTGTAACATGAGGAA+AGG | - | chr1_1:76800456-76800475 | Msa0045100:intron | 40.0% | |
| !! | GAGGAAAGGAGAAGCATTAT+AGG | - | chr1_1:76800470-76800489 | Msa0045100:intron | 40.0% |
| !!! | GGCATATTCGTTTTTTTGGG+TGG | + | chr1_1:76800645-76800664 | None:intergenic | 40.0% |
| ! | GATAATTTGTGGCGAAAGGT+TGG | + | chr1_1:76800674-76800693 | None:intergenic | 40.0% |
| GTCTATCCATGGTAAATGAG+TGG | + | chr1_1:76800715-76800734 | None:intergenic | 40.0% | |
| ATGCCCCATCAAAATTTAGC+AGG | + | chr1_1:76801133-76801152 | None:intergenic | 40.0% | |
| !! | CTAAATTTTGATGGGGCATC+TGG | - | chr1_1:76801134-76801153 | Msa0045100:intron | 40.0% |
| CTTCATGAAGCAAGAGTAAG+TGG | + | chr1_1:76801225-76801244 | None:intergenic | 40.0% | |
| TTGCTTCATGAAGCCTTCTT+TGG | - | chr1_1:76801232-76801251 | Msa0045100:intron | 40.0% | |
| TCATAAGGGTGAGCACAAAA+AGG | + | chr1_1:76801376-76801395 | None:intergenic | 40.0% | |
| ACTTGCAAAAGATGGAGACA+GGG | + | chr1_1:76801457-76801476 | None:intergenic | 40.0% | |
| TAGTCAATGAAGACAGCGTT+TGG | - | chr1_1:76802239-76802258 | Msa0045100:intron | 40.0% | |
| CAAGTCTAAATGTATGCAGC+TGG | + | chr1_1:76802463-76802482 | None:intergenic | 40.0% | |
| CAGCTGCATACATTTAGACT+TGG | - | chr1_1:76802461-76802480 | Msa0045100:intron | 40.0% | |
| ATCTTGTGTAATACTCCCTC+CGG | - | chr1_1:76802723-76802742 | Msa0045100:intron | 40.0% | |
| ACAGAATACATGACTGTGTC+TGG | - | chr1_1:76803148-76803167 | Msa0045100:intron | 40.0% | |
| TAACTTCGGTCAACTGCATT+AGG | - | chr1_1:76803288-76803307 | Msa0045100:intron | 40.0% | |
| AACTTCGGTCAACTGCATTA+GGG | - | chr1_1:76803289-76803308 | Msa0045100:intron | 40.0% | |
| GTCAATATTCGTTTAGGCGA+TGG | - | chr1_1:76803331-76803350 | Msa0045100:intron | 40.0% | |
| ! | GTCAGAAGCTCAGAACATTT+TGG | + | chr1_1:76803472-76803491 | None:intergenic | 40.0% |
| AATAAAGCAGACAACGATGG+AGG | + | chr1_1:76803515-76803534 | None:intergenic | 40.0% | |
| GTGAATAAAGCAGACAACGA+TGG | + | chr1_1:76803518-76803537 | None:intergenic | 40.0% | |
| ! | CAGGTATTTGAAGGTACATC+TGG | - | chr1_1:76803643-76803662 | Msa0045100:intron | 40.0% |
| TACCTCTCCAGTAAACTGTA+TGG | + | chr1_1:76803689-76803708 | None:intergenic | 40.0% | |
| ! | TATCATTATCTGGGACGGTT+TGG | + | chr1_1:76803955-76803974 | None:intergenic | 40.0% |
| GCTTAGGTGATAGTTACGAT+TGG | + | chr1_1:76803990-76804009 | None:intergenic | 40.0% | |
| TTCTGCTTAGAAAAAAGGGG+AGG | - | chr1_1:76804183-76804202 | Msa0045100:intron | 40.0% | |
| GAGGGAGTAGAATAGTAATC+AGG | + | chr1_1:76804250-76804269 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr1_1:76804268-76804287 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr1_1:76804406-76804425 | Msa0045100:intron | 40.0% |
| !!! | CGACACTCATTTTGAAACAG+AGG | - | chr1_1:76804510-76804529 | Msa0045100:intron | 40.0% |
| !! | GAGGGAGTGTTAATTTGTTC+TGG | - | chr1_1:76804529-76804548 | Msa0045100:intron | 40.0% |
| !! | GGAGTGTTAATTTGTTCTGG+AGG | - | chr1_1:76804532-76804551 | Msa0045100:intron | 40.0% |
| !! | GTGTTAATTTGTTCTGGAGG+GGG | - | chr1_1:76804535-76804554 | Msa0045100:intron | 40.0% |
| TTGGCTAAATTGCAGAGGAA+CGG | + | chr1_1:76804602-76804621 | None:intergenic | 40.0% | |
| CTACGGATGTAAACAAGAGA+GGG | + | chr1_1:76804742-76804761 | None:intergenic | 40.0% | |
| CTGTATCATTGGACATGCTT+GGG | - | chr1_1:76804775-76804794 | Msa0045100:CDS | 40.0% | |
| ATGCTTGGGCGGATATTTAA+CGG | - | chr1_1:76804789-76804808 | Msa0045100:intron | 40.0% | |
| GAGGCTTACTTGGATATATC+AGG | - | chr1_1:76804834-76804853 | Msa0045100:intron | 40.0% | |
| CAGGATAGGTTCTATCACTA+GGG | + | chr1_1:76804962-76804981 | None:intergenic | 40.0% | |
| TCAGGATAGGTTCTATCACT+AGG | + | chr1_1:76804963-76804982 | None:intergenic | 40.0% | |
| TAGTGATAGAACCTATCCTG+AGG | - | chr1_1:76804962-76804981 | Msa0045100:intron | 40.0% | |
| AATTTCATTATGGGGGAGAC+CGG | + | chr1_1:76805069-76805088 | None:intergenic | 40.0% | |
| GTGCAGCAATTTCATTATGG+GGG | + | chr1_1:76805076-76805095 | None:intergenic | 40.0% | |
| AGTTTCTTCACAGGAGTTGT+CGG | + | chr1_1:76805523-76805542 | None:intergenic | 40.0% | |
| !!! | TGCCATTGTTTTTGCAGCTA+TGG | - | chr1_1:76805743-76805762 | Msa0045100:intron | 40.0% |
| !!! | GCCATTGTTTTTGCAGCTAT+GGG | - | chr1_1:76805744-76805763 | Msa0045100:intron | 40.0% |
| TCCCATAGCTGCAAAAACAA+TGG | + | chr1_1:76805748-76805767 | None:intergenic | 40.0% | |
| ! | CCCCCTTATTCTGGTAATTT+TGG | - | chr1_1:76805889-76805908 | Msa0045100:intron | 40.0% |
| AGCCATTCAACCATCAATAC+TGG | + | chr1_1:76805940-76805959 | None:intergenic | 40.0% | |
| ACCAAACACATGTGAAGTGT+AGG | - | chr1_1:76806177-76806196 | Msa0045100:intron | 40.0% | |
| CCAAACACATGTGAAGTGTA+GGG | - | chr1_1:76806178-76806197 | Msa0045100:intron | 40.0% | |
| GTGATGATACGTTCGATTGT+AGG | + | chr1_1:76806452-76806471 | None:intergenic | 40.0% | |
| CTTCTTGTTCTTGATCCTAC+AGG | - | chr1_1:76806787-76806806 | Msa0045100:intron | 40.0% | |
| TATCTGGTAAGATCAGGAGT+TGG | + | chr1_1:76807068-76807087 | None:intergenic | 40.0% | |
| AGGGACAGATATACATCGAT+AGG | - | chr1_1:76807096-76807115 | Msa0045100:intron | 40.0% | |
| TAGGCAGTTGCATAATAGAC+AGG | - | chr1_1:76807115-76807134 | Msa0045100:intron | 40.0% | |
| CAGTTGCATAATAGACAGGT+GGG | - | chr1_1:76807119-76807138 | Msa0045100:intron | 40.0% | |
| ATGAATGCCATAAGCCATGT+TGG | - | chr1_1:76807165-76807184 | Msa0045100:intron | 40.0% | |
| TACAATCAGTCTAAGTGACC+TGG | - | chr1_1:76807625-76807644 | Msa0045100:intron | 40.0% | |
| ! | GATGGAAGAACATTGATTGG+TGG | + | chr1_1:76807703-76807722 | None:intergenic | 40.0% |
| TTCATCAACCGAGATAGTGA+TGG | + | chr1_1:76807721-76807740 | None:intergenic | 40.0% | |
| !! | ATCACTATCTCGGTTGATGA+AGG | - | chr1_1:76807720-76807739 | Msa0045100:CDS | 40.0% |
| CTGTATGCAACTTATGCCAT+TGG | - | chr1_1:76808025-76808044 | Msa0045100:intron | 40.0% | |
| TGCAACTTATGCCATTGGAA+AGG | - | chr1_1:76808030-76808049 | Msa0045100:intron | 40.0% | |
| !! | AGAAGAAGCACTTTCATCTG+AGG | - | chr1_1:76808081-76808100 | Msa0045100:intron | 40.0% |
| ! | ACGGTTGTATCTGGAATTTC+TGG | - | chr1_1:76808217-76808236 | Msa0045100:intron | 40.0% |
| ! | GAATATATTGCAGGTGTCGT+AGG | + | chr1_1:76808276-76808295 | None:intergenic | 40.0% |
| ATCTTGCATGGACTTTACTC+CGG | - | chr1_1:76808306-76808325 | Msa0045100:intron | 40.0% | |
| ! | TACGATGAAGAAGTACACGA+GGG | + | chr1_1:76808337-76808356 | None:intergenic | 40.0% |
| ! | ATACGATGAAGAAGTACACG+AGG | + | chr1_1:76808338-76808357 | None:intergenic | 40.0% |
| GTAAAACTGGTCAAGAGTCT+TGG | + | chr1_1:76808366-76808385 | None:intergenic | 40.0% | |
| ATACAAACTATCGGGGTGTG+CGG | + | chr1_1:76799024-76799043 | None:intergenic | 45.0% | |
| CTTTCACTCATCCGCATTCA+AGG | - | chr1_1:76799084-76799103 | Msa0045100:CDS | 45.0% | |
| ACTCTGTTCTGTCTGGTATG+TGG | + | chr1_1:76799127-76799146 | None:intergenic | 45.0% | |
| !!! | GATGGTTTTAGTTGGTGTCC+AGG | + | chr1_1:76799310-76799329 | None:intergenic | 45.0% |
| !!! | ACGGTTTTTGAGGTCTTGGA+GGG | + | chr1_1:76799417-76799436 | None:intergenic | 45.0% |
| ! | GAAGAAGACGACGGTTTTTG+AGG | + | chr1_1:76799427-76799446 | None:intergenic | 45.0% |
| !! | GAGGTTGATGAAGAAGACGA+CGG | + | chr1_1:76799436-76799455 | None:intergenic | 45.0% |
| AAGAAAACGACGGGATTGAG+AGG | + | chr1_1:76799455-76799474 | None:intergenic | 45.0% | |
| TGTCACGTCTTCTGATTCTC+CGG | - | chr1_1:76799489-76799508 | Msa0045100:intron | 45.0% | |
| ACTGAAGACAGTAGCCATCA+GGG | + | chr1_1:76799717-76799736 | None:intergenic | 45.0% | |
| AACTGAAGACAGTAGCCATC+AGG | + | chr1_1:76799718-76799737 | None:intergenic | 45.0% | |
| !! | TTTAGCAAACAAGCACCGGA+GGG | + | chr1_1:76799794-76799813 | None:intergenic | 45.0% |
| !! | ATTTAGCAAACAAGCACCGG+AGG | + | chr1_1:76799795-76799814 | None:intergenic | 45.0% |
| !! | TCGATTTGGGGCTTGTGTTA+TGG | + | chr1_1:76800000-76800019 | None:intergenic | 45.0% |
| GGTCTCTGGATTGTAACATG+AGG | - | chr1_1:76800451-76800470 | Msa0045100:intron | 45.0% | |
| TCCATGGTAAATGAGTGGGT+GGG | + | chr1_1:76800710-76800729 | None:intergenic | 45.0% | |
| ATCCATGGTAAATGAGTGGG+TGG | + | chr1_1:76800711-76800730 | None:intergenic | 45.0% | |
| !! | AATTTTGATGGGGCATCTGG+TGG | - | chr1_1:76801137-76801156 | Msa0045100:intron | 45.0% |
| !! | ATTTTGATGGGGCATCTGGT+GGG | - | chr1_1:76801138-76801157 | Msa0045100:intron | 45.0% |
| ATATACAGAGGGGCCAAAGA+AGG | + | chr1_1:76801248-76801267 | None:intergenic | 45.0% | |
| CACTTGCAAAAGATGGAGAC+AGG | + | chr1_1:76801458-76801477 | None:intergenic | 45.0% | |
| ! | CCTTCATTAGCTCTTCAAGC+AGG | + | chr1_1:76801512-76801531 | None:intergenic | 45.0% |
| CCTGCTTGAAGAGCTAATGA+AGG | - | chr1_1:76801509-76801528 | Msa0045100:intron | 45.0% | |
| GAAGAGCTAATGAAGGTGAC+TGG | - | chr1_1:76801516-76801535 | Msa0045100:intron | 45.0% | |
| ATATAAACCCACACTCCCAC+AGG | + | chr1_1:76801709-76801728 | None:intergenic | 45.0% | |
| ! | GACTGGAGCATTAGACAATG+AGG | + | chr1_1:76801924-76801943 | None:intergenic | 45.0% |
| ATTCGCATTGCTTCAAACCC+TGG | + | chr1_1:76802108-76802127 | None:intergenic | 45.0% | |
| CCAAAATAAGCACGACCAAG+AGG | + | chr1_1:76802362-76802381 | None:intergenic | 45.0% | |
| ! | CCTCTTGGTCGTGCTTATTT+TGG | - | chr1_1:76802359-76802378 | Msa0045100:CDS | 45.0% |
| !!! | CTTGGTCGTGCTTATTTTGG+TGG | - | chr1_1:76802362-76802381 | Msa0045100:CDS | 45.0% |
| ! | TGCTTACATTTGAGACCGGA+GGG | + | chr1_1:76802741-76802760 | None:intergenic | 45.0% |
| ! | TTGCTTACATTTGAGACCGG+AGG | + | chr1_1:76802742-76802761 | None:intergenic | 45.0% |
| TGGTTTCTCACATACTCCCT+CGG | + | chr1_1:76802877-76802896 | None:intergenic | 45.0% | |
| ! | AGGGAGTATGTGAGAAACCA+GGG | - | chr1_1:76802877-76802896 | Msa0045100:intron | 45.0% |
| ! | ATGACTGTGTCTGGAGTTAC+CGG | - | chr1_1:76803157-76803176 | Msa0045100:intron | 45.0% |
| CTCAAGAATGACCAATGGTC+CGG | + | chr1_1:76803179-76803198 | None:intergenic | 45.0% | |
| GGACAAGTTCTCGAGATTGA+TGG | - | chr1_1:76803367-76803386 | Msa0045100:intron | 45.0% | |
| !! | TCTCGAGATTGATGGCGAAA+AGG | - | chr1_1:76803375-76803394 | Msa0045100:intron | 45.0% |
| GACCATACAGTTTACTGGAG+AGG | - | chr1_1:76803684-76803703 | Msa0045100:intron | 45.0% | |
| CACATAATTGAGCCGATGGT+TGG | - | chr1_1:76803906-76803925 | Msa0045100:intron | 45.0% | |
| !! | ATTATCTGGGACGGTTTGGT+AGG | + | chr1_1:76803951-76803970 | None:intergenic | 45.0% |
| !! | ACAGCAGTTTTGGCATGCTT+AGG | + | chr1_1:76804006-76804025 | None:intergenic | 45.0% |
| TGACATGCAACACAGTCTGA+CGG | + | chr1_1:76804035-76804054 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr1_1:76804269-76804288 | None:intergenic | 45.0% |
| TGTAAACAAGAGAGGGACAG+AGG | + | chr1_1:76804735-76804754 | None:intergenic | 45.0% | |
| CCTACGGATGTAAACAAGAG+AGG | + | chr1_1:76804743-76804762 | None:intergenic | 45.0% | |
| ! | CCTCTCTTGTTTACATCCGT+AGG | - | chr1_1:76804740-76804759 | Msa0045100:CDS | 45.0% |
| CCAAGCATGTCCAATGATAC+AGG | + | chr1_1:76804777-76804796 | None:intergenic | 45.0% | |
| CCTGTATCATTGGACATGCT+TGG | - | chr1_1:76804774-76804793 | Msa0045100:CDS | 45.0% | |
| TATCATTGGACATGCTTGGG+CGG | - | chr1_1:76804778-76804797 | Msa0045100:CDS | 45.0% | |
| GGTTCTATCACTAGGGTTGA+CGG | + | chr1_1:76804955-76804974 | None:intergenic | 45.0% | |
| CTGTATCATCTCCTCAGGAT+AGG | + | chr1_1:76804976-76804995 | None:intergenic | 45.0% | |
| ! | ATCCCTCTATTTTCAGCTGC+CGG | - | chr1_1:76805047-76805066 | Msa0045100:intron | 45.0% |
| CGATAAGGTTACTGTGCTGA+AGG | - | chr1_1:76805346-76805365 | Msa0045100:intron | 45.0% | |
| ATCTTGATTTATGCAGGGGG+AGG | - | chr1_1:76805705-76805724 | Msa0045100:CDS | 45.0% | |
| TGCAGCTATGGGAGTTAACA+TGG | - | chr1_1:76805755-76805774 | Msa0045100:intron | 45.0% | |
| ! | AAGCGTGACTTTGAGGAGAA+TGG | - | chr1_1:76805795-76805814 | Msa0045100:intron | 45.0% |
| ! | CTTTGAGGAGAATGGCTCAA+TGG | - | chr1_1:76805803-76805822 | Msa0045100:intron | 45.0% |
| CCCTACACTTCACATGTGTT+TGG | + | chr1_1:76806181-76806200 | None:intergenic | 45.0% | |
| GCAGTAGTAAGAGCAATACG+AGG | + | chr1_1:76806476-76806495 | None:intergenic | 45.0% | |
| TTATGCTGATGCTCTTCGTG+AGG | - | chr1_1:76806556-76806575 | Msa0045100:intron | 45.0% | |
| TGAACATGCCGGAAGAATTG+AGG | - | chr1_1:76806886-76806905 | Msa0045100:intron | 45.0% | |
| GAACATGCCGGAAGAATTGA+GGG | - | chr1_1:76806887-76806906 | Msa0045100:intron | 45.0% | |
| AACATGCCGGAAGAATTGAG+GGG | - | chr1_1:76806888-76806907 | Msa0045100:intron | 45.0% | |
| TTTACGCCCCTCAATTCTTC+CGG | + | chr1_1:76806897-76806916 | None:intergenic | 45.0% | |
| CTGTCCCTCCGTAATATATC+TGG | + | chr1_1:76807084-76807103 | None:intergenic | 45.0% | |
| GCAGTTGCATAATAGACAGG+TGG | - | chr1_1:76807118-76807137 | Msa0045100:intron | 45.0% | |
| TGGCTTATGGCATTCATCAC+AGG | + | chr1_1:76807162-76807181 | None:intergenic | 45.0% | |
| TCATTCTGATGTGTCCAACC+AGG | - | chr1_1:76807886-76807905 | Msa0045100:intron | 45.0% | |
| CAAACAAGAAGAGACCTGGT+TGG | + | chr1_1:76807903-76807922 | None:intergenic | 45.0% | |
| GGAACAAACAAGAAGAGACC+TGG | + | chr1_1:76807907-76807926 | None:intergenic | 45.0% | |
| TCCAGTCTCTAGATCTTGCA+TGG | - | chr1_1:76808294-76808313 | Msa0045100:intron | 45.0% | |
| TCCATGCAAGATCTAGAGAC+TGG | + | chr1_1:76808298-76808317 | None:intergenic | 45.0% | |
| GAAGTACACGAGGGAAAATC+CGG | + | chr1_1:76808328-76808347 | None:intergenic | 45.0% | |
| !! | AAAATTAAAAAATAAACAAA+AGG | + | chr1_1:76800349-76800368 | None:intergenic | 5.0% |
| TACAAACTATCGGGGTGTGC+GGG | + | chr1_1:76799023-76799042 | None:intergenic | 50.0% | |
| !!! | AGCGGGTTCAGTGGTTTTGA+GGG | + | chr1_1:76799340-76799359 | None:intergenic | 50.0% |
| ! | GTGATGAGTGGGTTTCACGA+CGG | + | chr1_1:76799376-76799395 | None:intergenic | 50.0% |
| !! | GCAACTCTGAGGTGATGAGT+GGG | + | chr1_1:76799387-76799406 | None:intergenic | 50.0% |
| !! | AGCAACTCTGAGGTGATGAG+TGG | + | chr1_1:76799388-76799407 | None:intergenic | 50.0% |
| !!! | GACGGTTTTTGAGGTCTTGG+AGG | + | chr1_1:76799418-76799437 | None:intergenic | 50.0% |
| !!! | GACGACGGTTTTTGAGGTCT+TGG | + | chr1_1:76799421-76799440 | None:intergenic | 50.0% |
| !! | GTTGGTGGTATCATCCCTGA+TGG | - | chr1_1:76799700-76799719 | Msa0045100:intron | 50.0% |
| TGTGGCGAAAGGTTGGAGAT+GGG | + | chr1_1:76800667-76800686 | None:intergenic | 50.0% | |
| TTGTGGCGAAAGGTTGGAGA+TGG | + | chr1_1:76800668-76800687 | None:intergenic | 50.0% | |
| CCATGGTAAATGAGTGGGTG+GGG | + | chr1_1:76800709-76800728 | None:intergenic | 50.0% | |
| ! | ATTAGCTCTTCAAGCAGGCG+AGG | + | chr1_1:76801507-76801526 | None:intergenic | 50.0% |
| TTGTGGCAAGCTCTTCCTGT+GGG | - | chr1_1:76801691-76801710 | Msa0045100:intron | 50.0% | |
| !! | AGAGCTTGGTGTAGTCCTCT+TGG | - | chr1_1:76802344-76802363 | Msa0045100:CDS | 50.0% |
| ! | TTGCCTACATTTGAGACCCG+AGG | - | chr1_1:76802857-76802876 | Msa0045100:intron | 50.0% |
| ! | TGCCTACATTTGAGACCCGA+GGG | - | chr1_1:76802858-76802877 | Msa0045100:intron | 50.0% |
| GGTTTCTCACATACTCCCTC+GGG | + | chr1_1:76802876-76802895 | None:intergenic | 50.0% | |
| ! | GAGGGAGTATGTGAGAAACC+AGG | - | chr1_1:76802876-76802895 | Msa0045100:intron | 50.0% |
| GTTTAGGCGATGGAACTACC+CGG | - | chr1_1:76803341-76803360 | Msa0045100:intron | 50.0% | |
| TCTCGAGAACTTGTCCATGC+CGG | + | chr1_1:76803363-76803382 | None:intergenic | 50.0% | |
| TGGCGAAAAGGCTGTTGTTC+AGG | - | chr1_1:76803387-76803406 | Msa0045100:intron | 50.0% | |
| ! | ACGGGGGATAACAGCAGTTT+TGG | + | chr1_1:76804016-76804035 | None:intergenic | 50.0% |
| ACATGCAACACAGTCTGACG+GGG | + | chr1_1:76804033-76804052 | None:intergenic | 50.0% | |
| GACATGCAACACAGTCTGAC+GGG | + | chr1_1:76804034-76804053 | None:intergenic | 50.0% | |
| ! | TTCTGGAGGGGGAATTTCTC+AGG | - | chr1_1:76804546-76804565 | Msa0045100:intron | 50.0% |
| ATTGCAGAGGAACGGAGGAT+GGG | + | chr1_1:76804594-76804613 | None:intergenic | 50.0% | |
| AATTGCAGAGGAACGGAGGA+TGG | + | chr1_1:76804595-76804614 | None:intergenic | 50.0% | |
| GCTAAATTGCAGAGGAACGG+AGG | + | chr1_1:76804599-76804618 | None:intergenic | 50.0% | |
| GGGCGGATATTTAACGGTTC+TGG | - | chr1_1:76804795-76804814 | Msa0045100:intron | 50.0% | |
| CCAGTCTGTATCATCTCCTC+AGG | + | chr1_1:76804981-76805000 | None:intergenic | 50.0% | |
| CCTGAGGAGATGATACAGAC+TGG | - | chr1_1:76804978-76804997 | Msa0045100:intron | 50.0% | |
| GACCGGCAGCTGAAAATAGA+GGG | + | chr1_1:76805052-76805071 | None:intergenic | 50.0% | |
| AGACCGGCAGCTGAAAATAG+AGG | + | chr1_1:76805053-76805072 | None:intergenic | 50.0% | |
| TGCTGCACAGATTTGTCGTC+AGG | - | chr1_1:76805088-76805107 | Msa0045100:intron | 50.0% | |
| ! | GGAAGAATTGAGGGGCGTAA+AGG | - | chr1_1:76806896-76806915 | Msa0045100:intron | 50.0% |
| ! | TCACCACTGCAGAGTGCTAT+TGG | - | chr1_1:76807842-76807861 | Msa0045100:intron | 50.0% |
| ! | CACCACTGCAGAGTGCTATT+GGG | - | chr1_1:76807843-76807862 | Msa0045100:intron | 50.0% |
| ! | ACCACTGCAGAGTGCTATTG+GGG | - | chr1_1:76807844-76807863 | Msa0045100:intron | 50.0% |
| TGGGGAGGGAATGACTAGAA+AGG | - | chr1_1:76807862-76807881 | Msa0045100:intron | 50.0% | |
| TGCCATTGGAAAGGATGTCC+AGG | - | chr1_1:76808039-76808058 | Msa0045100:intron | 50.0% | |
| TGCCTGGACATCCTTTCCAA+TGG | + | chr1_1:76808044-76808063 | None:intergenic | 50.0% | |
| CAACGACAGCTTTCATTGCC+TGG | + | chr1_1:76808060-76808079 | None:intergenic | 50.0% | |
| CAGGCAATGAAAGCTGTCGT+TGG | - | chr1_1:76808058-76808077 | Msa0045100:intron | 50.0% | |
| AGCACTTTCATCTGAGGACC+TGG | - | chr1_1:76808087-76808106 | Msa0045100:intron | 50.0% | |
| !! | TGAGAGGAAGTTTGTTGCCC+AGG | - | chr1_1:76808247-76808266 | Msa0045100:intron | 50.0% |
| !! | GAGAGGAAGTTTGTTGCCCA+GGG | - | chr1_1:76808248-76808267 | Msa0045100:intron | 50.0% |
| AACTGGTCAAGAGTCTTGGC+TGG | + | chr1_1:76808362-76808381 | None:intergenic | 50.0% | |
| CAGCATCTCGGCTGTAAAAC+TGG | + | chr1_1:76808379-76808398 | None:intergenic | 50.0% | |
| ! | CAGTTTTACAGCCGAGATGC+TGG | - | chr1_1:76808377-76808396 | Msa0045100:intron | 50.0% |
| !! | GAGCGGGTTCAGTGGTTTTG+AGG | + | chr1_1:76799341-76799360 | None:intergenic | 55.0% |
| ! | ATGAGTGGGTTTCACGACGG+CGG | + | chr1_1:76799373-76799392 | None:intergenic | 55.0% |
| AGGGTTTCGCAGCAACTCTG+AGG | + | chr1_1:76799398-76799417 | None:intergenic | 55.0% | |
| GTGGCGAAAGGTTGGAGATG+GGG | + | chr1_1:76800666-76800685 | None:intergenic | 55.0% | |
| TAAATGAGTGGGTGGGGAGC+TGG | + | chr1_1:76800703-76800722 | None:intergenic | 55.0% | |
| CCCCACCCACTCATTTACCA+TGG | - | chr1_1:76800706-76800725 | Msa0045100:intron | 55.0% | |
| AGTAGGCGGAACTGCACTTG+TGG | - | chr1_1:76801674-76801693 | Msa0045100:intron | 55.0% | |
| CTTGTGGCAAGCTCTTCCTG+TGG | - | chr1_1:76801690-76801709 | Msa0045100:intron | 55.0% | |
| AAGCTCTTCCTGTGGGAGTG+TGG | - | chr1_1:76801698-76801717 | Msa0045100:intron | 55.0% | |
| ! | AGCTCTTCCTGTGGGAGTGT+GGG | - | chr1_1:76801699-76801718 | Msa0045100:intron | 55.0% |
| ATGCAGCTGGGAACACGTTC+AGG | + | chr1_1:76802450-76802469 | None:intergenic | 55.0% | |
| CTCCCTCGGGTCTCAAATGT+AGG | + | chr1_1:76802863-76802882 | None:intergenic | 55.0% | |
| ! | GTCTGGAGTTACCGGACCAT+TGG | - | chr1_1:76803165-76803184 | Msa0045100:intron | 55.0% |
| CTCGAGAACTTGTCCATGCC+GGG | + | chr1_1:76803362-76803381 | None:intergenic | 55.0% | |
| CATGCAACACAGTCTGACGG+GGG | + | chr1_1:76804032-76804051 | None:intergenic | 55.0% | |
| AGAGGGACAGAGGAAGTCAG+AGG | + | chr1_1:76804725-76804744 | None:intergenic | 55.0% | |
| GCACAGATTTGTCGTCAGGC+TGG | - | chr1_1:76805092-76805111 | Msa0045100:intron | 55.0% | |
| CTCTGGCAGCAGATACCTGT+AGG | + | chr1_1:76806805-76806824 | None:intergenic | 55.0% | |
| GGTATCTGCTGCCAGAGAAG+AGG | - | chr1_1:76806808-76806827 | Msa0045100:intron | 55.0% | |
| TCTTCCTGGCACCTCTTCTC+TGG | + | chr1_1:76806822-76806841 | None:intergenic | 55.0% | |
| CCAGGATAACCACGTCTTCC+TGG | + | chr1_1:76806836-76806855 | None:intergenic | 55.0% | |
| CCAGGAAGACGTGGTTATCC+TGG | - | chr1_1:76806833-76806852 | Msa0045100:intron | 55.0% | |
| TCCCCAATAGCACTCTGCAG+TGG | + | chr1_1:76807848-76807867 | None:intergenic | 55.0% | |
| ! | ACTGCAGAGTGCTATTGGGG+AGG | - | chr1_1:76807847-76807866 | Msa0045100:intron | 55.0% |
| ! | CTGCAGAGTGCTATTGGGGA+GGG | - | chr1_1:76807848-76807867 | Msa0045100:intron | 55.0% |
| ACTATCGGGGTGTGCGGGTA+TGG | + | chr1_1:76799018-76799037 | None:intergenic | 60.0% | |
| GGGACAGAGGAAGTCAGAGG+TGG | + | chr1_1:76804722-76804741 | None:intergenic | 60.0% | |
| !! | GAAGAGGTGCCAGGAAGACG+TGG | - | chr1_1:76806824-76806843 | Msa0045100:intron | 60.0% |
| TCGGGGTGTGCGGGTATGGT+GGG | + | chr1_1:76799014-76799033 | None:intergenic | 65.0% | |
| ATCGGGGTGTGCGGGTATGG+TGG | + | chr1_1:76799015-76799034 | None:intergenic | 65.0% | |
| ! | GGGTGGATGAGCGGGTTCAG+TGG | + | chr1_1:76799349-76799368 | None:intergenic | 65.0% |
| GTGGGTTTCACGACGGCGGT+GGG | + | chr1_1:76799369-76799388 | None:intergenic | 65.0% | |
| ! | AGTGGGTTTCACGACGGCGG+TGG | + | chr1_1:76799370-76799389 | None:intergenic | 65.0% |
| GGCGATGGAACTACCCGGCA+TGG | - | chr1_1:76803346-76803365 | Msa0045100:intron | 65.0% | |
| !! | GCTGCCAGAGAAGAGGTGCC+AGG | - | chr1_1:76806815-76806834 | Msa0045100:intron | 65.0% |
| ! | GCAGGTGTCGTAGGCTCCCT+GGG | + | chr1_1:76808267-76808286 | None:intergenic | 65.0% |
| ! | TGCAGGTGTCGTAGGCTCCC+TGG | + | chr1_1:76808268-76808287 | None:intergenic | 65.0% |
| GGGGTGTGCGGGTATGGTGG+GGG | + | chr1_1:76799012-76799031 | None:intergenic | 70.0% | |
| CGGGGTGTGCGGGTATGGTG+GGG | + | chr1_1:76799013-76799032 | None:intergenic | 70.0% | |
| ACGGCGGTGGGTGGATGAGC+GGG | + | chr1_1:76799357-76799376 | None:intergenic | 70.0% | |
| GACGGCGGTGGGTGGATGAG+CGG | + | chr1_1:76799358-76799377 | None:intergenic | 70.0% | |
| GGTTTCACGACGGCGGTGGG+TGG | + | chr1_1:76799366-76799385 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 76798737 | 76808406 | 76798737 | ID=Msa0045100;Name=Msa0045100 |
| chr1_1 | mRNA | 76798737 | 76808406 | 76798737 | ID=Msa0045100-mRNA-1;Parent=Msa0045100;Name=Msa0045100-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.66|0.57|0.89|0.72|0.78|19|0|551 |
| chr1_1 | exon | 76808402 | 76808406 | 76808402 | ID=Msa0045100-mRNA-1:exon:26254;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76808251 | 76808258 | 76808251 | ID=Msa0045100-mRNA-1:exon:26253;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76807633 | 76807742 | 76807633 | ID=Msa0045100-mRNA-1:exon:26252;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76805613 | 76805726 | 76805613 | ID=Msa0045100-mRNA-1:exon:26251;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76804718 | 76804799 | 76804718 | ID=Msa0045100-mRNA-1:exon:26250;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76803936 | 76803991 | 76803936 | ID=Msa0045100-mRNA-1:exon:26249;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76803735 | 76803833 | 76803735 | ID=Msa0045100-mRNA-1:exon:26248;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76803438 | 76803497 | 76803438 | ID=Msa0045100-mRNA-1:exon:26247;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76802288 | 76802381 | 76802288 | ID=Msa0045100-mRNA-1:exon:26246;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76801989 | 76802197 | 76801989 | ID=Msa0045100-mRNA-1:exon:26245;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76801345 | 76801422 | 76801345 | ID=Msa0045100-mRNA-1:exon:26244;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76800566 | 76800703 | 76800566 | ID=Msa0045100-mRNA-1:exon:26243;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76800184 | 76800334 | 76800184 | ID=Msa0045100-mRNA-1:exon:26242;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76800007 | 76800089 | 76800007 | ID=Msa0045100-mRNA-1:exon:26241;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76799402 | 76799449 | 76799402 | ID=Msa0045100-mRNA-1:exon:26240;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76799236 | 76799289 | 76799236 | ID=Msa0045100-mRNA-1:exon:26239;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76799010 | 76799118 | 76799010 | ID=Msa0045100-mRNA-1:exon:26238;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76798961 | 76798980 | 76798961 | ID=Msa0045100-mRNA-1:exon:26237;Parent=Msa0045100-mRNA-1 |
| chr1_1 | exon | 76798737 | 76798874 | 76798737 | ID=Msa0045100-mRNA-1:exon:26236;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76808402 | 76808406 | 76808402 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76808251 | 76808258 | 76808251 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76807633 | 76807742 | 76807633 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76805613 | 76805726 | 76805613 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76804718 | 76804799 | 76804718 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76803936 | 76803991 | 76803936 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76803735 | 76803833 | 76803735 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76803438 | 76803497 | 76803438 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76802288 | 76802381 | 76802288 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76801989 | 76802197 | 76801989 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76801345 | 76801422 | 76801345 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76800566 | 76800703 | 76800566 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76800184 | 76800334 | 76800184 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76800007 | 76800089 | 76800007 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76799402 | 76799449 | 76799402 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76799236 | 76799289 | 76799236 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76799010 | 76799118 | 76799010 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76798961 | 76798980 | 76798961 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| chr1_1 | CDS | 76798737 | 76798874 | 76798737 | ID=Msa0045100-mRNA-1:cds;Parent=Msa0045100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
