Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426840 | EEF41119.1 | 74.121 | 398 | 40 | 5 | 29 | 376 | 19 | 403 | 0.0 | 553 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426840 | sp|Q40079|VATB2_HORVU | 85.000 | 300 | 14 | 2 | 95 | 376 | 194 | 480 | 2.62e-177 | 504 |
| Msa1426840 | sp|Q40079|VATB2_HORVU | 80.328 | 61 | 12 | 0 | 27 | 87 | 12 | 72 | 1.85e-22 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426840 | M4EAJ6 | 72.304 | 408 | 34 | 4 | 27 | 376 | 15 | 401 | 0.0 | 555 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045080 | Msa1426840 | 0.827497 | 1.514014e-54 | -8.615850e-47 |
| Msa0045090 | Msa1426840 | 0.884413 | 1.959661e-71 | -8.615850e-47 |
| Msa0045100 | Msa1426840 | 0.878369 | 2.970628e-69 | -8.615850e-47 |
| Msa0045120 | Msa1426840 | 0.870564 | 1.326858e-66 | -8.615850e-47 |
| Msa0045140 | Msa1426840 | 0.868471 | 6.373266e-66 | -8.615850e-47 |
| Msa0045150 | Msa1426840 | 0.874491 | 6.477735e-68 | -8.615850e-47 |
| Msa0045160 | Msa1426840 | 0.894672 | 1.978743e-75 | -8.615850e-47 |
| Msa0045190 | Msa1426840 | 0.818463 | 1.934680e-52 | -8.615850e-47 |
| Msa0045350 | Msa1426840 | 0.878884 | 1.956042e-69 | -8.615850e-47 |
| Msa0045370 | Msa1426840 | 0.876213 | 1.669023e-68 | -8.615850e-47 |
| Msa0045380 | Msa1426840 | 0.870902 | 1.027234e-66 | -8.615850e-47 |
| Msa0045400 | Msa1426840 | 0.854474 | 1.201534e-61 | -8.615850e-47 |
| Msa1426790 | Msa1426840 | 0.863259 | 2.829194e-64 | -8.615850e-47 |
| Msa1426820 | Msa1426840 | 0.895793 | 6.837367e-76 | -8.615850e-47 |
| Msa1426840 | Msa1432570 | 0.837433 | 5.213466e-57 | -8.615850e-47 |
| Msa1084980 | Msa1426840 | 0.817892 | 2.605291e-52 | -8.615850e-47 |
| Msa1085000 | Msa1426840 | 0.878772 | 2.142135e-69 | -8.615850e-47 |
| Msa1085010 | Msa1426840 | 0.866117 | 3.605007e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426840 | MtrunA17_Chr1g0211291 | 85.333 | 300 | 13 | 2 | 95 | 376 | 200 | 486 | 3.95e-179 | 506 |
| Msa1426840 | MtrunA17_Chr1g0211291 | 71.053 | 76 | 14 | 1 | 29 | 104 | 19 | 86 | 4.78e-24 | 103 |
| Msa1426840 | MtrunA17_Chr7g0250051 | 85.000 | 300 | 14 | 2 | 95 | 376 | 198 | 484 | 2.12e-178 | 504 |
| Msa1426840 | MtrunA17_Chr7g0250051 | 71.053 | 76 | 14 | 1 | 29 | 104 | 18 | 85 | 5.00e-24 | 103 |
| Msa1426840 | MtrunA17_Chr4g0015651 | 28.571 | 203 | 135 | 3 | 97 | 297 | 188 | 382 | 2.47e-18 | 86.3 |
| Msa1426840 | MtrunA17_Chr4g0016741 | 28.571 | 203 | 135 | 3 | 97 | 297 | 188 | 382 | 2.47e-18 | 86.3 |
| Msa1426840 | MtrunA17_CPg0492941 | 28.571 | 203 | 135 | 3 | 97 | 297 | 188 | 382 | 2.47e-18 | 86.3 |
| Msa1426840 | MtrunA17_Chr4g0000341 | 32.075 | 159 | 102 | 2 | 121 | 274 | 303 | 460 | 6.95e-18 | 85.5 |
| Msa1426840 | MtrunA17_MTg0490471 | 28.177 | 181 | 127 | 2 | 97 | 275 | 198 | 377 | 1.45e-14 | 75.1 |
| Msa1426840 | MtrunA17_Chr4g0016371 | 29.032 | 217 | 129 | 4 | 123 | 317 | 185 | 398 | 7.72e-14 | 72.4 |
| Msa1426840 | MtrunA17_Chr1g0208751 | 28.729 | 181 | 119 | 2 | 104 | 276 | 257 | 435 | 9.63e-14 | 72.4 |
| Msa1426840 | MtrunA17_CPg0493401 | 29.032 | 217 | 129 | 4 | 123 | 317 | 224 | 437 | 1.00e-13 | 72.4 |
| Msa1426840 | MtrunA17_Chr1g0208761 | 28.729 | 181 | 119 | 2 | 104 | 276 | 260 | 438 | 1.10e-13 | 72.4 |
| Msa1426840 | MtrunA17_Chr3g0090971 | 29.032 | 217 | 129 | 4 | 123 | 317 | 224 | 437 | 1.13e-13 | 72.0 |
| Msa1426840 | MtrunA17_Chr7g0229391 | 28.704 | 216 | 129 | 4 | 124 | 317 | 225 | 437 | 4.36e-13 | 70.5 |
| Msa1426840 | MtrunA17_Chr2g0278821 | 27.647 | 170 | 113 | 3 | 139 | 306 | 11 | 172 | 1.68e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426840 | AT4G38510.5 | 85.235 | 298 | 13 | 2 | 97 | 376 | 207 | 491 | 3.49e-177 | 502 |
| Msa1426840 | AT4G38510.5 | 84.746 | 59 | 9 | 0 | 29 | 87 | 25 | 83 | 6.53e-24 | 103 |
| Msa1426840 | AT4G38510.1 | 85.235 | 298 | 13 | 2 | 97 | 376 | 200 | 484 | 3.98e-177 | 501 |
| Msa1426840 | AT4G38510.1 | 84.746 | 59 | 9 | 0 | 29 | 87 | 18 | 76 | 6.90e-24 | 103 |
| Msa1426840 | AT4G38510.3 | 85.235 | 298 | 13 | 2 | 97 | 376 | 200 | 484 | 3.98e-177 | 501 |
| Msa1426840 | AT4G38510.3 | 84.746 | 59 | 9 | 0 | 29 | 87 | 18 | 76 | 6.90e-24 | 103 |
| Msa1426840 | AT4G38510.4 | 85.235 | 298 | 13 | 2 | 97 | 376 | 200 | 484 | 3.98e-177 | 501 |
| Msa1426840 | AT4G38510.4 | 84.746 | 59 | 9 | 0 | 29 | 87 | 18 | 76 | 6.90e-24 | 103 |
| Msa1426840 | AT4G38510.2 | 85.235 | 298 | 13 | 2 | 97 | 376 | 200 | 484 | 3.98e-177 | 501 |
| Msa1426840 | AT4G38510.2 | 84.746 | 59 | 9 | 0 | 29 | 87 | 18 | 76 | 6.90e-24 | 103 |
| Msa1426840 | AT1G20260.1 | 84.512 | 297 | 15 | 2 | 98 | 376 | 201 | 484 | 4.45e-175 | 496 |
| Msa1426840 | AT1G20260.1 | 68.421 | 76 | 16 | 1 | 29 | 104 | 17 | 84 | 4.07e-23 | 100 |
| Msa1426840 | AT1G76030.1 | 84.512 | 297 | 15 | 2 | 98 | 376 | 200 | 483 | 9.54e-175 | 496 |
| Msa1426840 | AT1G76030.1 | 63.529 | 85 | 23 | 1 | 20 | 104 | 8 | 84 | 3.97e-23 | 100 |
| Msa1426840 | ATCG00120.1 | 28.079 | 203 | 136 | 3 | 97 | 297 | 188 | 382 | 3.05e-18 | 86.7 |
| Msa1426840 | AT1G78900.1 | 32.075 | 159 | 102 | 2 | 121 | 274 | 302 | 459 | 8.90e-18 | 85.5 |
| Msa1426840 | AT1G78900.2 | 32.075 | 159 | 102 | 2 | 121 | 274 | 302 | 459 | 8.90e-18 | 85.5 |
| Msa1426840 | AT2G07698.1 | 27.670 | 206 | 139 | 3 | 97 | 300 | 468 | 665 | 1.68e-15 | 78.6 |
| Msa1426840 | ATMG01190.1 | 27.670 | 206 | 139 | 3 | 97 | 300 | 198 | 395 | 3.80e-15 | 77.0 |
| Msa1426840 | AT5G08690.1 | 26.991 | 226 | 135 | 4 | 104 | 304 | 257 | 477 | 4.65e-14 | 73.9 |
| Msa1426840 | AT5G08670.1 | 26.991 | 226 | 135 | 4 | 104 | 304 | 257 | 477 | 5.00e-14 | 73.9 |
| Msa1426840 | AT5G08680.1 | 27.753 | 227 | 132 | 5 | 104 | 304 | 260 | 480 | 5.30e-14 | 73.9 |
| Msa1426840 | ATCG00480.1 | 28.241 | 216 | 132 | 3 | 123 | 317 | 224 | 437 | 5.75e-14 | 73.6 |
Find 106 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGACAATCTCTTGATATT+TGG | 0.086118 | tig0026076:+37547 | Msa1426840:intergenic |
| GCATGGTTAGAATTGGAATT+TGG | 0.112862 | tig0026076:+34682 | Msa1426840:intergenic |
| CCTCTTGGTCGTGCTTATTT+TGG | 0.178155 | tig0026076:-38501 | Msa1426840:CDS |
| TCTTACTACTGCTGAATATC+TGG | 0.262357 | tig0026076:-35133 | Msa1426840:CDS |
| TTGACAATCTCTTGATATTT+GGG | 0.268902 | tig0026076:+37548 | Msa1426840:intergenic |
| TGTCTAAACGAAAATATCAT+AGG | 0.313074 | tig0026076:+39482 | Msa1426840:intergenic |
| CATGGTTAGAATTGGAATTT+GGG | 0.316289 | tig0026076:+34683 | Msa1426840:intergenic |
| CCAGGATAACCACGTCTTCC+TGG | 0.316708 | tig0026076:+34777 | Msa1426840:intergenic |
| TCATTTGGCATGGTTAGAAT+TGG | 0.334129 | tig0026076:+34675 | Msa1426840:intergenic |
| TGCGGGTGTCGTAGGCTCCC+TGG | 0.338118 | tig0026076:+33353 | Msa1426840:intergenic |
| CAGGTATTTGAAGGTACATC+TGG | 0.345618 | tig0026076:-37218 | Msa1426840:intron |
| GAGATTGTCAATATTCGTTT+AGG | 0.348480 | tig0026076:-37536 | Msa1426840:CDS |
| CTGTCCCTCCGTAATATATC+TGG | 0.348917 | tig0026076:+34529 | Msa1426840:intergenic |
| ATTACTTCATTACCATCATT+TGG | 0.354095 | tig0026076:+34660 | Msa1426840:intergenic |
| CAGCATCTCGGCTGTAAAAC+TGG | 0.358949 | tig0026076:+33242 | Msa1426840:intergenic |
| CAACGACAGCTTTCGTTGCC+TGG | 0.359191 | tig0026076:+33550 | Msa1426840:intergenic |
| ATGACTGTGTCTGGAGTTAC+CGG | 0.376731 | tig0026076:-37704 | Msa1426840:CDS |
| TCATAGGGGTGAGCACAAAA+AGG | 0.395826 | tig0026076:+39498 | Msa1426840:intergenic |
| AGATTACCAAATTAAGGAAA+AGG | 0.411767 | tig0026076:+35781 | Msa1426840:intergenic |
| GGTCATTCTTGAGAAAGTTA+AGG | 0.412036 | tig0026076:-37675 | Msa1426840:intron |
| TGGCGAAAAGGCTGTTGTTC+AGG | 0.415818 | tig0026076:-37474 | Msa1426840:intron |
| TTTACGCCCCTCAATTCTTC+CGG | 0.416790 | tig0026076:+34716 | Msa1426840:intergenic |
| CTTCATTAATACCCACTTCA+AGG | 0.424318 | tig0026076:+33446 | Msa1426840:intergenic |
| TCTTCCTGGCACCTCTTCTC+TGG | 0.425819 | tig0026076:+34791 | Msa1426840:intergenic |
| ATGAAATCACTTGCAAAAGA+TGG | 0.438991 | tig0026076:+39409 | Msa1426840:intergenic |
| GTCTAAACGAAAATATCATA+GGG | 0.439716 | tig0026076:+39483 | Msa1426840:intergenic |
| TGAGAGGAAGTCTGTTGCCC+AGG | 0.444969 | tig0026076:-33371 | Msa1426840:CDS |
| GATTACCAAATTAAGGAAAA+GGG | 0.449091 | tig0026076:+35782 | Msa1426840:intergenic |
| AAGCGTGACTTTGAGGAGAA+TGG | 0.451660 | tig0026076:-35822 | Msa1426840:CDS |
| GAAGTACACGAGGGAAAATC+CGG | 0.454247 | tig0026076:+33293 | Msa1426840:intergenic |
| TAGAGACTGGAATATATTGC+GGG | 0.454648 | tig0026076:+33336 | Msa1426840:intergenic |
| TGATCTTACCAGATATATTA+CGG | 0.458091 | tig0026076:-34537 | Msa1426840:CDS |
| GTGATGATACGTTCGATTGT+AGG | 0.458361 | tig0026076:+35168 | Msa1426840:intergenic |
| CCAGGAAGACGTGGTTATCC+TGG | 0.466984 | tig0026076:-34777 | Msa1426840:CDS |
| GTCAATATTCGTTTAGGCGA+TGG | 0.473500 | tig0026076:-37530 | Msa1426840:CDS |
| TGAACATGCCGGAAGAATTG+AGG | 0.476429 | tig0026076:-34724 | Msa1426840:CDS |
| GCGGGTGTCGTAGGCTCCCT+GGG | 0.477631 | tig0026076:+33354 | Msa1426840:intergenic |
| CTCGAGAACTTGTCCATGCC+GGG | 0.477725 | tig0026076:+37502 | Msa1426840:intergenic |
| CACTTGCAAAAGATGGAGAC+AGG | 0.478454 | tig0026076:+39416 | Msa1426840:intergenic |
| GGACAAGTTCTCGAGATTGA+TGG | 0.478592 | tig0026076:-37494 | Msa1426840:CDS |
| ACAGAATACATGACTGTGTC+TGG | 0.496594 | tig0026076:-37713 | Msa1426840:intron |
| GTAATATATCTGGTAAGATC+AGG | 0.498299 | tig0026076:+34539 | Msa1426840:intergenic |
| GCTGCCAGAGAAGAGGTGCC+AGG | 0.506143 | tig0026076:-34795 | Msa1426840:CDS |
| GAACATGCCGGAAGAATTGA+GGG | 0.507410 | tig0026076:-34723 | Msa1426840:CDS |
| CTTTGAGGAGAATGGCTCAA+TGG | 0.507722 | tig0026076:-35814 | Msa1426840:CDS |
| GAATATATTGCGGGTGTCGT+AGG | 0.509788 | tig0026076:+33345 | Msa1426840:intergenic |
| CTCAAGAATGACCAATGGTC+CGG | 0.512187 | tig0026076:+37685 | Msa1426840:intergenic |
| TCTCGAGAACTTGTCCATGC+CGG | 0.512745 | tig0026076:+37501 | Msa1426840:intergenic |
| ATGTTCTTCCATCACTATCT+CGG | 0.513623 | tig0026076:-33898 | Msa1426840:CDS |
| ATGCAGGCGAGGTGCTGTCT+CGG | 0.514779 | tig0026076:+39378 | Msa1426840:intergenic |
| TCCATGCAAGATCTAGAGAC+TGG | 0.515422 | tig0026076:+33323 | Msa1426840:intergenic |
| AGAGCTTGGTGTAGTCCTCT+TGG | 0.517761 | tig0026076:-38516 | Msa1426840:CDS |
| TGCCATTGGAAAGGATGTCC+AGG | 0.518353 | tig0026076:-33568 | Msa1426840:CDS |
| ATCACTATCTCGGTTGATGA+AGG | 0.519694 | tig0026076:-33888 | Msa1426840:intron |
| ATCTTGCATGGACTTTACTC+CGG | 0.519977 | tig0026076:-33312 | Msa1426840:CDS |
| ATTCTAACCATGCCAAATGA+TGG | 0.521293 | tig0026076:-34672 | Msa1426840:intron |
| GTCTGGAGTTACCGGACCAT+TGG | 0.521668 | tig0026076:-37696 | Msa1426840:CDS |
| TCTCGAGATTGATGGCGAAA+AGG | 0.527436 | tig0026076:-37486 | Msa1426840:CDS |
| GTAAAACTGGTCAAGAGTCT+TGG | 0.529021 | tig0026076:+33255 | Msa1426840:intergenic |
| CCTTCATTAGCTCTTCATGC+AGG | 0.532164 | tig0026076:+39362 | Msa1426840:intergenic |
| TTCATTACCATCATTTGGCA+TGG | 0.532782 | tig0026076:+34665 | Msa1426840:intergenic |
| TGCGGCTATGGGAGTTAACA+TGG | 0.532881 | tig0026076:-35862 | Msa1426840:CDS |
| GTGCAACATACATTTAACCT+TGG | 0.533755 | tig0026076:-38456 | Msa1426840:intron |
| CTGTATGCAACTTATGCCAT+TGG | 0.536747 | tig0026076:-33582 | Msa1426840:CDS |
| AGCACTTTCATCTGAGGACC+TGG | 0.537514 | tig0026076:-33520 | Msa1426840:CDS |
| TAGGCAGTTGCATAATAGAC+AGG | 0.544818 | tig0026076:-34495 | Msa1426840:intron |
| TCCAGTCTCTAGATCTTGCA+TGG | 0.545696 | tig0026076:-33324 | Msa1426840:CDS |
| AGTGATGGAAGAACATTGAT+TGG | 0.552550 | tig0026076:+33905 | Msa1426840:intergenic |
| AACTGGTCAAGAGTCTTGGC+TGG | 0.554684 | tig0026076:+33259 | Msa1426840:intergenic |
| GGAAGAATTGAGGGGCGTAA+AGG | 0.556865 | tig0026076:-34714 | Msa1426840:CDS |
| TGCCTGGACATCCTTTCCAA+TGG | 0.558387 | tig0026076:+33566 | Msa1426840:intergenic |
| GAGAGGAAGTCTGTTGCCCA+GGG | 0.561200 | tig0026076:-33370 | Msa1426840:CDS |
| AGAGAAAATTAGTAGATGCC+AGG | 0.561602 | tig0026076:+33502 | Msa1426840:intergenic |
| TAGTGAAATTGTCCTTGAAG+TGG | 0.569681 | tig0026076:-33458 | Msa1426840:CDS |
| GGCGATGGAACTACCCGGCA+TGG | 0.573515 | tig0026076:-37515 | Msa1426840:CDS |
| CTAGAGACTGGAATATATTG+CGG | 0.576024 | tig0026076:+33335 | Msa1426840:intergenic |
| GCAACAATTTATGAACATGC+CGG | 0.577220 | tig0026076:-34735 | Msa1426840:CDS |
| CAGGCAACGAAAGCTGTCGT+TGG | 0.583789 | tig0026076:-33549 | Msa1426840:CDS |
| GAATATCTGGCTTATGAATG+TGG | 0.590666 | tig0026076:-35120 | Msa1426840:CDS |
| AGTGAAATTGTCCTTGAAGT+GGG | 0.600879 | tig0026076:-33457 | Msa1426840:intron |
| ATGGAAGAACATTGATTGGT+GGG | 0.602705 | tig0026076:+33909 | Msa1426840:intergenic |
| AGGTATTTGAAGGTACATCT+GGG | 0.603787 | tig0026076:-37217 | Msa1426840:intron |
| AGGGACAGATATACATCGAT+AGG | 0.603945 | tig0026076:-34514 | Msa1426840:CDS |
| CCTGCATGAAGAGCTAATGA+AGG | 0.605404 | tig0026076:-39362 | Msa1426840:intron |
| AATTTCTGGACAAGTTTGAG+AGG | 0.606081 | tig0026076:-33387 | Msa1426840:intron |
| ATTAGCTCTTCATGCAGGCG+AGG | 0.608084 | tig0026076:+39367 | Msa1426840:intergenic |
| TATCTGGTAAGATCAGGAGT+TGG | 0.610819 | tig0026076:+34545 | Msa1426840:intergenic |
| TTCATCAACCGAGATAGTGA+TGG | 0.612897 | tig0026076:+33890 | Msa1426840:intergenic |
| AGAAGAAGCACTTTCATCTG+AGG | 0.617772 | tig0026076:-33526 | Msa1426840:CDS |
| TTATGCTGATGCTCTTCGTG+AGG | 0.621125 | tig0026076:-35061 | Msa1426840:intron |
| CCAAAATAAGCACGACCAAG+AGG | 0.622212 | tig0026076:+38501 | Msa1426840:intergenic |
| GGTATCTGCTGCCAGAGAAG+AGG | 0.624465 | tig0026076:-34802 | Msa1426840:CDS |
| GAAGAGGTGCCAGGAAGACG+TGG | 0.628045 | tig0026076:-34786 | Msa1426840:CDS |
| GATGGAAGAACATTGATTGG+TGG | 0.633609 | tig0026076:+33908 | Msa1426840:intergenic |
| ACTTTCTCAAGAATGACCAA+TGG | 0.645136 | tig0026076:+37680 | Msa1426840:intergenic |
| TGCAACTTATGCCATTGGAA+AGG | 0.655175 | tig0026076:-33577 | Msa1426840:CDS |
| CTTACCAGATATATTACGGA+GGG | 0.659583 | tig0026076:-34533 | Msa1426840:CDS |
| AGATCTGTATACATATAACC+AGG | 0.661413 | tig0026076:+34759 | Msa1426840:intergenic |
| TCTAAACGAAAATATCATAG+GGG | 0.677583 | tig0026076:+39484 | Msa1426840:intergenic |
| GTTTAGGCGATGGAACTACC+CGG | 0.678023 | tig0026076:-37520 | Msa1426840:CDS |
| ACTTGCAAAAGATGGAGACA+GGG | 0.688727 | tig0026076:+39417 | Msa1426840:intergenic |
| TCTTACCAGATATATTACGG+AGG | 0.728933 | tig0026076:-34534 | Msa1426840:CDS |
| ATACGATGAAGAAGTACACG+AGG | 0.729276 | tig0026076:+33283 | Msa1426840:intergenic |
| GCAGTAGTAAGAGCAATACG+AGG | 0.737884 | tig0026076:+35144 | Msa1426840:intergenic |
| TACGATGAAGAAGTACACGA+GGG | 0.742809 | tig0026076:+33284 | Msa1426840:intergenic |
| AACATGCCGGAAGAATTGAG+GGG | 0.764342 | tig0026076:-34722 | Msa1426840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATATGATATGTTTTAAT+AGG | - | tig0026076:33644-33663 | Msa1426840:intron | 10.0% |
| !! | AAAAAAAATGTATCTTAAAT+CGG | - | tig0026076:34828-34847 | Msa1426840:intron | 10.0% |
| !!! | TTATAATTTTTTTAATAAGG+GGG | + | tig0026076:37510-37529 | Msa1426840:intergenic | 10.0% |
| !!! | TATTTTACTTATTGAAAAAC+TGG | - | tig0026076:33543-33562 | Msa1426840:CDS | 15.0% |
| !!! | ATTTTACTTATTGAAAAACT+GGG | - | tig0026076:33544-33563 | Msa1426840:CDS | 15.0% |
| !!! | AAACTACATAAATTTAAAGT+AGG | - | tig0026076:33579-33598 | Msa1426840:CDS | 15.0% |
| !! | TGATAATCTTAATTTAAATG+TGG | + | tig0026076:33738-33757 | Msa1426840:intergenic | 15.0% |
| !! | TGTAAATCTATTGATATATT+GGG | - | tig0026076:34518-34537 | Msa1426840:CDS | 15.0% |
| !!! | TAAACAGCATATATTTTTAT+GGG | + | tig0026076:35718-35737 | Msa1426840:intergenic | 15.0% |
| !!! | ATAAACAGCATATATTTTTA+TGG | + | tig0026076:35719-35738 | Msa1426840:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | tig0026076:36462-36481 | Msa1426840:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | tig0026076:36463-36482 | Msa1426840:intergenic | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | + | tig0026076:36527-36546 | Msa1426840:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | + | tig0026076:36528-36547 | Msa1426840:intergenic | 15.0% |
| !!! | TTTTAAAGATTACCAAATTA+AGG | + | tig0026076:37013-37032 | Msa1426840:intergenic | 15.0% |
| !!! | AATTTTCTAAAAACGTTAAA+TGG | - | tig0026076:37381-37400 | Msa1426840:intron | 15.0% |
| !!! | TACTTCAATATTTTGTTTAA+TGG | - | tig0026076:37430-37449 | Msa1426840:intron | 15.0% |
| !! | GGTTAAGAAATAAAAATTAT+CGG | + | tig0026076:37544-37563 | Msa1426840:intergenic | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | tig0026076:38537-38556 | Msa1426840:intron | 15.0% |
| !! | TTATATGTAAACTATCTTAT+TGG | - | tig0026076:39122-39141 | Msa1426840:intron | 15.0% |
| !!! | ATTTTCCTCAATATTATTAA+CGG | - | tig0026076:39365-39384 | Msa1426840:exon | 15.0% |
| !!! | ATCAATTTATTTCAAGTAGT+TGG | - | tig0026076:34489-34508 | Msa1426840:intron | 20.0% |
| !! | GTGTAAATCTATTGATATAT+TGG | - | tig0026076:34517-34536 | Msa1426840:CDS | 20.0% |
| !! | AAGTTTGAACACATTTAAAA+AGG | + | tig0026076:34914-34933 | Msa1426840:intergenic | 20.0% |
| !! | AATAAAGAGACACATAATTT+AGG | + | tig0026076:35046-35065 | Msa1426840:intergenic | 20.0% |
| !! | AGTTAAAATTTAGTCACAAA+GGG | + | tig0026076:35197-35216 | Msa1426840:intergenic | 20.0% |
| !! | AAGTTAAAATTTAGTCACAA+AGG | + | tig0026076:35198-35217 | Msa1426840:intergenic | 20.0% |
| !!! | TTGTGACTAAATTTTAACTT+CGG | - | tig0026076:35198-35217 | Msa1426840:intron | 20.0% |
| !! | AAACTATAAAATGACGTTAA+AGG | + | tig0026076:35523-35542 | Msa1426840:intergenic | 20.0% |
| !! | CTTTATAATAACTATTGATC+AGG | - | tig0026076:35548-35567 | Msa1426840:intron | 20.0% |
| !! | TAACAGTTAATGCATTATTT+AGG | + | tig0026076:35774-35793 | Msa1426840:intergenic | 20.0% |
| !! | TATCTTCTTTATCATTATCT+GGG | + | tig0026076:35888-35907 | Msa1426840:intergenic | 20.0% |
| !! | TTATCTTCTTTATCATTATC+TGG | + | tig0026076:35889-35908 | Msa1426840:intergenic | 20.0% |
| !! | GAAAAGAAATATTATCAGAT+AGG | - | tig0026076:36240-36259 | Msa1426840:intron | 20.0% |
| !! | AAATATTATCAGATAGGAAA+GGG | - | tig0026076:36246-36265 | Msa1426840:intron | 20.0% |
| !!! | GACACTTTTTTTTTAGAAAA+TGG | + | tig0026076:36393-36412 | Msa1426840:intergenic | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | tig0026076:36429-36448 | Msa1426840:intergenic | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | tig0026076:36430-36449 | Msa1426840:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | tig0026076:36503-36522 | Msa1426840:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | + | tig0026076:36526-36545 | Msa1426840:intergenic | 20.0% |
| !! | TACTCATATTACATAAAGTA+TGG | + | tig0026076:36835-36854 | Msa1426840:intergenic | 20.0% |
| !! | TACTTTATGTAATATGAGTA+AGG | - | tig0026076:36835-36854 | Msa1426840:intron | 20.0% |
| !!! | TTTGATTCTTCATTTTTCTT+TGG | - | tig0026076:37189-37208 | Msa1426840:intron | 20.0% |
| !!! | TTGATTCTTCATTTTTCTTT+GGG | - | tig0026076:37190-37209 | Msa1426840:intron | 20.0% |
| !! | TAAGAAATAAAAATTATCGG+AGG | + | tig0026076:37541-37560 | Msa1426840:intergenic | 20.0% |
| !!! | TTTTCCTAATAAATTACAGT+TGG | + | tig0026076:37757-37776 | Msa1426840:intergenic | 20.0% |
| !!! | AGTAAATTTTGCTTACATTT+TGG | + | tig0026076:38435-38454 | Msa1426840:intergenic | 20.0% |
| !!! | GTAAGCAAAATTTACTTTTT+AGG | - | tig0026076:38439-38458 | Msa1426840:intron | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | + | tig0026076:38528-38547 | Msa1426840:intergenic | 20.0% |
| !! | ATATAAAAGCAGTTAATTGT+TGG | - | tig0026076:38589-38608 | Msa1426840:intron | 20.0% |
| !! | ACATATGTTTCTTAATCAAA+AGG | - | tig0026076:38963-38982 | Msa1426840:intron | 20.0% |
| !! | TAAAAAAAGAAAACTACACA+GGG | + | tig0026076:39105-39124 | Msa1426840:intergenic | 20.0% |
| !! | ATAAAAAAAGAAAACTACAC+AGG | + | tig0026076:39106-39125 | Msa1426840:intergenic | 20.0% |
| ! | TCTAAACGAAAATATCATAG+GGG | + | tig0026076:33304-33323 | None:intergenic | 25.0% |
| ! | GTCTAAACGAAAATATCATA+GGG | + | tig0026076:33305-33324 | None:intergenic | 25.0% |
| ! | TGTCTAAACGAAAATATCAT+AGG | + | tig0026076:33306-33325 | None:intergenic | 25.0% |
| ! | ATCGAATCTAATCTATCAAA+AGG | + | tig0026076:33474-33493 | Msa1426840:intergenic | 25.0% |
| ! | CATGAAATATATAAAGAGAC+TGG | + | tig0026076:33866-33885 | Msa1426840:intergenic | 25.0% |
| ! | AAAGAAATTGTTGTAGATGA+AGG | + | tig0026076:33977-33996 | Msa1426840:intergenic | 25.0% |
| !! | TATGATTTTTCTCTGAACTT+TGG | - | tig0026076:34099-34118 | Msa1426840:intron | 25.0% |
| !! | TCATTGACTAGTAAATTGAA+AGG | + | tig0026076:34154-34173 | Msa1426840:intergenic | 25.0% |
| ! | TCTTTATTACTGTTTGTTCT+TGG | - | tig0026076:34188-34207 | Msa1426840:intron | 25.0% |
| ! | AACAAGTTGTTTAATAGCAT+TGG | - | tig0026076:34463-34482 | Msa1426840:intron | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | tig0026076:34744-34763 | Msa1426840:intergenic | 25.0% |
| !!! | TAGGCAACTTTTTACTTTTT+AGG | + | tig0026076:34769-34788 | Msa1426840:intergenic | 25.0% |
| !!! | GATACATTTTTTTTTTTCCC+TGG | + | tig0026076:34822-34841 | Msa1426840:intergenic | 25.0% |
| !! | AAAATCACACATTTTAGATC+AGG | + | tig0026076:34858-34877 | Msa1426840:intergenic | 25.0% |
| ! | AATACCATAAGTTATCAACA+CGG | + | tig0026076:34999-35018 | Msa1426840:intergenic | 25.0% |
| ! | TTGACAATCTCTTGATATTT+GGG | + | tig0026076:35240-35259 | Msa1426840:intergenic | 25.0% |
| ! | ATTGACAATCTCTTGATATT+TGG | + | tig0026076:35241-35260 | Msa1426840:intergenic | 25.0% |
| ! | AATCTTATTATGCATGCTTA+AGG | + | tig0026076:35343-35362 | Msa1426840:intergenic | 25.0% |
| !! | TGGATTTTTCTTATTGATGA+TGG | - | tig0026076:36213-36232 | Msa1426840:intron | 25.0% |
| ! | GAAATATTATCAGATAGGAA+AGG | - | tig0026076:36245-36264 | Msa1426840:intron | 25.0% |
| ! | AATATTATCAGATAGGAAAG+GGG | - | tig0026076:36247-36266 | Msa1426840:intron | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | tig0026076:36504-36523 | Msa1426840:intergenic | 25.0% |
| ! | ATAATGATTAATACGTCAGT+AGG | + | tig0026076:36655-36674 | Msa1426840:intergenic | 25.0% |
| ! | TTTATGTAATATGAGTAAGG+TGG | - | tig0026076:36838-36857 | Msa1426840:intron | 25.0% |
| ! | TTACAAATCTTGATTTATGC+AGG | - | tig0026076:36867-36886 | Msa1426840:intron | 25.0% |
| ! | TACAAATCTTGATTTATGCA+GGG | - | tig0026076:36868-36887 | Msa1426840:intron | 25.0% |
| ! | GATTACCAAATTAAGGAAAA+GGG | + | tig0026076:37006-37025 | Msa1426840:intergenic | 25.0% |
| ! | AGATTACCAAATTAAGGAAA+AGG | + | tig0026076:37007-37026 | Msa1426840:intergenic | 25.0% |
| ! | AACCAAAATTACCAGAATAA+GGG | + | tig0026076:37062-37081 | Msa1426840:intergenic | 25.0% |
| ! | AAACCAAAATTACCAGAATA+AGG | + | tig0026076:37063-37082 | Msa1426840:intergenic | 25.0% |
| ! | AATAAATGTCTCATAATGCT+TGG | - | tig0026076:37142-37161 | Msa1426840:intron | 25.0% |
| !!! | TGATTCTTCATTTTTCTTTG+GGG | - | tig0026076:37191-37210 | Msa1426840:CDS | 25.0% |
| ! | ATCAATAGATATATGTGTAG+AGG | - | tig0026076:37274-37293 | Msa1426840:intron | 25.0% |
| !!! | ATACTAGTTCTACATTAAGA+TGG | + | tig0026076:37308-37327 | Msa1426840:intergenic | 25.0% |
| ! | CTTAATGTAGAACTAGTATT+TGG | - | tig0026076:37309-37328 | Msa1426840:intron | 25.0% |
| ! | TGTACCAACTGTAATTTATT+AGG | - | tig0026076:37750-37769 | Msa1426840:intron | 25.0% |
| ! | TAAAGAAAAATACAGGAGAA+TGG | + | tig0026076:37829-37848 | Msa1426840:intergenic | 25.0% |
| !! | AATCCTCTAAAGAAAAATAC+AGG | + | tig0026076:37836-37855 | Msa1426840:intergenic | 25.0% |
| ! | ATTACTTCATTACCATCATT+TGG | + | tig0026076:38128-38147 | Msa1426840:intergenic | 25.0% |
| !! | ATGAATTTTGTCTTCTGTTT+TGG | - | tig0026076:38146-38165 | Msa1426840:intron | 25.0% |
| ! | TGATCTTACCAGATATATTA+CGG | - | tig0026076:38248-38267 | Msa1426840:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | tig0026076:38464-38483 | Msa1426840:CDS | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | tig0026076:38464-38483 | Msa1426840:intergenic | 25.0% |
| !! | TTGTGTTATATAATGGGATT+CGG | - | tig0026076:38613-38632 | Msa1426840:intron | 25.0% |
| !! | TTCAATTCTCTTTCTTTTCT+TGG | - | tig0026076:38672-38691 | Msa1426840:intron | 25.0% |
| !! | CAATTTTCATTGATACATCA+AGG | - | tig0026076:38726-38745 | Msa1426840:intron | 25.0% |
| ! | TACAACCGTTAATAATATTG+AGG | + | tig0026076:39373-39392 | Msa1426840:intergenic | 25.0% |
| ! | ATATTATTAACGGTTGTATC+TGG | - | tig0026076:39375-39394 | Msa1426840:five_prime_UTR | 25.0% |
| ATGAAATCACTTGCAAAAGA+TGG | + | tig0026076:33379-33398 | None:intergenic | 30.0% | |
| ! | CTTTTGCAAGTGATTTCATA+CGG | - | tig0026076:33380-33399 | Msa1426840:intron | 30.0% |
| ATACTTAACAGTAAGACGAA+CGG | + | tig0026076:33518-33537 | Msa1426840:intergenic | 30.0% | |
| !! | GTGGTTATCATCTTTAGTTT+TGG | + | tig0026076:33719-33738 | Msa1426840:intergenic | 30.0% |
| GTCATCATTATCTTATGTGA+TGG | - | tig0026076:33768-33787 | Msa1426840:intron | 30.0% | |
| TAAATGCAAGCGATAAGAAA+AGG | + | tig0026076:33951-33970 | Msa1426840:intergenic | 30.0% | |
| ! | ATTTCTTTTCCTATGCAACT+AGG | - | tig0026076:33989-34008 | Msa1426840:intron | 30.0% |
| TGTAAATCAATTGTTGTACC+AGG | - | tig0026076:34012-34031 | Msa1426840:intron | 30.0% | |
| GTAAATCAATTGTTGTACCA+GGG | - | tig0026076:34013-34032 | Msa1426840:intron | 30.0% | |
| ! | GCACATTTTCTATAACTTCT+TGG | + | tig0026076:34313-34332 | Msa1426840:intergenic | 30.0% |
| !! | AATTCTAGAGTGATATACCA+AGG | + | tig0026076:34349-34368 | Msa1426840:intergenic | 30.0% |
| ! | TTATTTCAAGTAGTTGGACT+AGG | - | tig0026076:34495-34514 | Msa1426840:intron | 30.0% |
| GATGTATGTGGTCTATAATA+TGG | + | tig0026076:34732-34751 | Msa1426840:intergenic | 30.0% | |
| GATAACTTATGGTATTCGTT+TGG | - | tig0026076:35003-35022 | Msa1426840:intron | 30.0% | |
| GAGATTGTCAATATTCGTTT+AGG | - | tig0026076:35249-35268 | Msa1426840:intron | 30.0% | |
| ACTATTGATCAGGTATTTGA+AGG | - | tig0026076:35558-35577 | Msa1426840:intron | 30.0% | |
| TGTCTTGTCTCAATGAAATT+TGG | - | tig0026076:35739-35758 | Msa1426840:intron | 30.0% | |
| CTCAATGAAATTTGGATTAC+AGG | - | tig0026076:35747-35766 | Msa1426840:intron | 30.0% | |
| TTATAAGTATAGCCAACCAT+CGG | + | tig0026076:35845-35864 | Msa1426840:intergenic | 30.0% | |
| TTCTTTATCATTATCTGGGA+CGG | + | tig0026076:35884-35903 | Msa1426840:intergenic | 30.0% | |
| TTGCATGTCATCTTGATTAA+TGG | - | tig0026076:35969-35988 | Msa1426840:intron | 30.0% | |
| ! | CTCTTGAATTGTATGACTTT+TGG | - | tig0026076:36164-36183 | Msa1426840:intron | 30.0% |
| ATTGTGATCTGTGTTTCATT+TGG | - | tig0026076:36193-36212 | Msa1426840:intron | 30.0% | |
| !! | TTTGACTACTTTTGTAAAGG+CGG | + | tig0026076:36323-36342 | Msa1426840:intergenic | 30.0% |
| !! | TGGTTTGACTACTTTTGTAA+AGG | + | tig0026076:36326-36345 | Msa1426840:intergenic | 30.0% |
| AGAAAATGGATCAGTTATTC+CGG | + | tig0026076:36379-36398 | Msa1426840:intergenic | 30.0% | |
| !! | TGAAATGGGTCAGTTATTTT+GGG | + | tig0026076:36415-36434 | Msa1426840:intergenic | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | + | tig0026076:36416-36435 | Msa1426840:intergenic | 30.0% |
| TGTATAAATAAAGGGGAAAG+TGG | + | tig0026076:36519-36538 | Msa1426840:intergenic | 30.0% | |
| AATACGTCAGTAGGAATAAA+GGG | + | tig0026076:36646-36665 | Msa1426840:intergenic | 30.0% | |
| TAATACGTCAGTAGGAATAA+AGG | + | tig0026076:36647-36666 | Msa1426840:intergenic | 30.0% | |
| TATAAGCAATATCACAAGTG+AGG | + | tig0026076:36735-36754 | Msa1426840:intergenic | 30.0% | |
| TCTTATTGCCTTAGATTAAG+CGG | - | tig0026076:36770-36789 | Msa1426840:intron | 30.0% | |
| AAAATAGACCGCTTAATCTA+AGG | + | tig0026076:36781-36800 | Msa1426840:intergenic | 30.0% | |
| ACAAATCTTGATTTATGCAG+GGG | - | tig0026076:36869-36888 | Msa1426840:intron | 30.0% | |
| !!! | CAATTTTGCCATTGTTTTTG+CGG | - | tig0026076:36905-36924 | Msa1426840:intron | 30.0% |
| ACCAAAATTACCAGAATAAG+GGG | + | tig0026076:37061-37080 | Msa1426840:intergenic | 30.0% | |
| !! | TTTTTCCTTTCCAGTATTGA+TGG | - | tig0026076:37095-37114 | Msa1426840:intron | 30.0% |
| !! | TTCATTTTTCTTTGGGGATT+GGG | - | tig0026076:37197-37216 | Msa1426840:CDS | 30.0% |
| !!! | GGATCAACATATTGTTTTTG+AGG | - | tig0026076:37451-37470 | Msa1426840:intron | 30.0% |
| ! | ATGTCTGTACAATTGCTATT+GGG | - | tig0026076:37574-37593 | Msa1426840:intron | 30.0% |
| AGAATGGTAAACACAGTAAA+AGG | + | tig0026076:37813-37832 | Msa1426840:intergenic | 30.0% | |
| ! | TCTCCTGTATTTTTCTTTAG+AGG | - | tig0026076:37830-37849 | Msa1426840:intron | 30.0% |
| AGATCTGTATACATATAACC+AGG | + | tig0026076:38029-38048 | Msa1426840:intergenic | 30.0% | |
| CATGGTTAGAATTGGAATTT+GGG | + | tig0026076:38105-38124 | Msa1426840:intergenic | 30.0% | |
| !! | TGTCTTCTGTTTTGGATAAA+AGG | - | tig0026076:38154-38173 | Msa1426840:intron | 30.0% |
| GTAATATATCTGGTAAGATC+AGG | + | tig0026076:38249-38268 | Msa1426840:intergenic | 30.0% | |
| TGCATTATTACGAGAGAATT+TGG | - | tig0026076:38372-38391 | Msa1426840:intron | 30.0% | |
| GATGTATGTGGTTCATAATA+TGG | + | tig0026076:38491-38510 | Msa1426840:intergenic | 30.0% | |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | tig0026076:38540-38559 | Msa1426840:intron | 30.0% |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | tig0026076:38541-38560 | Msa1426840:intron | 30.0% |
| !! | TGTTGGCTTGTGTTATATAA+TGG | - | tig0026076:38606-38625 | Msa1426840:intron | 30.0% |
| !! | GTTGGCTTGTGTTATATAAT+GGG | - | tig0026076:38607-38626 | Msa1426840:intron | 30.0% |
| !! | GGTATTCTCTCTGAAAATTT+TGG | - | tig0026076:38634-38653 | Msa1426840:intron | 30.0% |
| CAGGGATCATATATATTTCA+TGG | + | tig0026076:38759-38778 | Msa1426840:intergenic | 30.0% | |
| CAATCTCATACAATTCATCA+GGG | + | tig0026076:38777-38796 | Msa1426840:intergenic | 30.0% | |
| TAATGCTTAGAATGTTTACC+AGG | + | tig0026076:38821-38840 | Msa1426840:intergenic | 30.0% | |
| ! | TTTCTTAATCAAAAGGTGTG+TGG | - | tig0026076:38970-38989 | Msa1426840:intron | 30.0% |
| ACACTCTAATGATGTATCAT+TGG | - | tig0026076:38996-39015 | Msa1426840:intron | 30.0% | |
| TCAACAGTTGCTAAAGTAAG+AGG | - | tig0026076:33905-33924 | Msa1426840:CDS | 35.0% | |
| CAACAGTTGCTAAAGTAAGA+GGG | - | tig0026076:33906-33925 | Msa1426840:CDS | 35.0% | |
| TGATTTACACCTAGTTGCAT+AGG | + | tig0026076:34001-34020 | Msa1426840:intergenic | 35.0% | |
| ! | TTTTGTTGATACAGAGAGCT+TGG | - | tig0026076:34255-34274 | Msa1426840:intron | 35.0% |
| GTGCAACATACATTTAACCT+TGG | - | tig0026076:34329-34348 | Msa1426840:intron | 35.0% | |
| AAGTCTAAATGTATGCAGCT+GGG | + | tig0026076:34387-34406 | Msa1426840:intergenic | 35.0% | |
| TAATTTCATAGCACGTAGCT+GGG | + | tig0026076:34444-34463 | Msa1426840:intergenic | 35.0% | |
| TTAATTTCATAGCACGTAGC+TGG | + | tig0026076:34445-34464 | Msa1426840:intergenic | 35.0% | |
| ! | ATGTTGCTTACATTTGAGAC+CGG | + | tig0026076:34670-34689 | Msa1426840:intergenic | 35.0% |
| !! | CAATCCGTGTTGATAACTTA+TGG | - | tig0026076:34992-35011 | Msa1426840:intron | 35.0% |
| ACTTTCTCAAGAATGACCAA+TGG | + | tig0026076:35108-35127 | Msa1426840:intergenic | 35.0% | |
| GGTCATTCTTGAGAAAGTTA+AGG | - | tig0026076:35110-35129 | Msa1426840:CDS | 35.0% | |
| ! | AGGTATTTGAAGGTACATCT+GGG | - | tig0026076:35568-35587 | Msa1426840:intron | 35.0% |
| AAAACACATAATTGAGCCGA+TGG | - | tig0026076:35826-35845 | Msa1426840:CDS | 35.0% | |
| GATTATCAGACTTCTCTAGT+CGG | + | tig0026076:36062-36081 | Msa1426840:intergenic | 35.0% | |
| GAAGTCTGATAATCTTCTTG+AGG | - | tig0026076:36068-36087 | Msa1426840:intron | 35.0% | |
| GGGGAATAAAAAATGCGATA+AGG | - | tig0026076:36266-36285 | Msa1426840:intron | 35.0% | |
| !!! | GTAGCATTGTGCTTGTTTTT+TGG | + | tig0026076:36346-36365 | Msa1426840:intergenic | 35.0% |
| GAAAATGGATCAGTTATTCC+GGG | + | tig0026076:36378-36397 | Msa1426840:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | - | tig0026076:36549-36568 | Msa1426840:intron | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | - | tig0026076:36562-36581 | Msa1426840:intron | 35.0% | |
| CAAAGTAGGTCAATTATACC+GGG | - | tig0026076:36563-36582 | Msa1426840:intron | 35.0% | |
| ATTCATGTCAGTTTCTTCAC+AGG | + | tig0026076:36700-36719 | Msa1426840:intergenic | 35.0% | |
| CAAATCTTGATTTATGCAGG+GGG | - | tig0026076:36870-36889 | Msa1426840:intron | 35.0% | |
| !!! | GTTTTTTAAGCGTGACTTTG+AGG | - | tig0026076:36956-36975 | Msa1426840:intron | 35.0% |
| ! | AGTGACCCTTTTCCTTAATT+TGG | - | tig0026076:36998-37017 | Msa1426840:intron | 35.0% |
| TCTTTAATTCCCCCTTATTC+TGG | - | tig0026076:37048-37067 | Msa1426840:intron | 35.0% | |
| CCAAAATTACCAGAATAAGG+GGG | + | tig0026076:37060-37079 | Msa1426840:intergenic | 35.0% | |
| TTCAACCATCAATACTGGAA+AGG | + | tig0026076:37103-37122 | Msa1426840:intergenic | 35.0% | |
| !! | TTCCAGTATTGATGGTTGAA+TGG | - | tig0026076:37103-37122 | Msa1426840:intron | 35.0% |
| !! | CTTCATTTTTCTTTGGGGAT+TGG | - | tig0026076:37196-37215 | Msa1426840:CDS | 35.0% |
| !! | TCATTTTTCTTTGGGGATTG+GGG | - | tig0026076:37198-37217 | Msa1426840:CDS | 35.0% |
| !! | ACTTCACATGTGTTTGGTTT+TGG | + | tig0026076:37343-37362 | Msa1426840:intergenic | 35.0% |
| TGTACAGACATGTAAGAAAC+AGG | + | tig0026076:37565-37584 | Msa1426840:intergenic | 35.0% | |
| CATGTCTGTACAATTGCTAT+TGG | - | tig0026076:37573-37592 | Msa1426840:intron | 35.0% | |
| ! | TTGCTATTGGGATTTACTGT+AGG | - | tig0026076:37586-37605 | Msa1426840:intron | 35.0% |
| TCTTACTACTGCTGAATATC+TGG | - | tig0026076:37652-37671 | Msa1426840:intron | 35.0% | |
| ! | GAATATCTGGCTTATGAATG+TGG | - | tig0026076:37665-37684 | Msa1426840:intron | 35.0% |
| GCAACAATTTATGAACATGC+CGG | - | tig0026076:38050-38069 | Msa1426840:intron | 35.0% | |
| GCATGGTTAGAATTGGAATT+TGG | + | tig0026076:38106-38125 | Msa1426840:intergenic | 35.0% | |
| TCATTTGGCATGGTTAGAAT+TGG | + | tig0026076:38113-38132 | Msa1426840:intergenic | 35.0% | |
| ATTCTAACCATGCCAAATGA+TGG | - | tig0026076:38113-38132 | Msa1426840:intron | 35.0% | |
| TTCATTACCATCATTTGGCA+TGG | + | tig0026076:38123-38142 | Msa1426840:intergenic | 35.0% | |
| TCTTACCAGATATATTACGG+AGG | - | tig0026076:38251-38270 | Msa1426840:intron | 35.0% | |
| CTTACCAGATATATTACGGA+GGG | - | tig0026076:38252-38271 | Msa1426840:intron | 35.0% | |
| AACTAATCCAACATGGCTTA+TGG | + | tig0026076:38350-38369 | Msa1426840:intergenic | 35.0% | |
| ATGCAGTAACTAATCCAACA+TGG | + | tig0026076:38357-38376 | Msa1426840:intergenic | 35.0% | |
| !!! | TGCTTACATTTTGGAACAGA+GGG | + | tig0026076:38426-38445 | Msa1426840:intergenic | 35.0% |
| !!! | TTGCTTACATTTTGGAACAG+AGG | + | tig0026076:38427-38446 | Msa1426840:intergenic | 35.0% |
| CCAATCTCATACAATTCATC+AGG | + | tig0026076:38778-38797 | Msa1426840:intergenic | 35.0% | |
| CCTGATGAATTGTATGAGAT+TGG | - | tig0026076:38775-38794 | Msa1426840:intron | 35.0% | |
| ! | ATGGAAGAACATTGATTGGT+GGG | + | tig0026076:38879-38898 | Msa1426840:intergenic | 35.0% |
| ! | AGTGATGGAAGAACATTGAT+TGG | + | tig0026076:38883-38902 | Msa1426840:intergenic | 35.0% |
| ATGTTCTTCCATCACTATCT+CGG | - | tig0026076:38887-38906 | Msa1426840:intron | 35.0% | |
| GATTTCAAAGTTCTGTCAAG+TGG | - | tig0026076:38937-38956 | Msa1426840:intron | 35.0% | |
| AGAGAAAATTAGTAGATGCC+AGG | + | tig0026076:39286-39305 | Msa1426840:intergenic | 35.0% | |
| TAGTGAAATTGTCCTTGAAG+TGG | - | tig0026076:39327-39346 | Msa1426840:intron | 35.0% | |
| AGTGAAATTGTCCTTGAAGT+GGG | - | tig0026076:39328-39347 | Msa1426840:intron | 35.0% | |
| CTTCATTAATACCCACTTCA+AGG | + | tig0026076:39342-39361 | Msa1426840:intergenic | 35.0% | |
| ! | AATTTCTGGACAAGTTTGAG+AGG | - | tig0026076:39398-39417 | Msa1426840:five_prime_UTR | 35.0% |
| TAGAGACTGGAATATATTGC+GGG | + | tig0026076:39452-39471 | Msa1426840:intergenic | 35.0% | |
| CTAGAGACTGGAATATATTG+CGG | + | tig0026076:39453-39472 | Msa1426840:intergenic | 35.0% | |
| ACTTGCAAAAGATGGAGACA+GGG | + | tig0026076:33371-33390 | None:intergenic | 40.0% | |
| TAGTCAATGAAGACAGCGTT+TGG | - | tig0026076:34164-34183 | Msa1426840:intron | 40.0% | |
| CAAGTCTAAATGTATGCAGC+TGG | + | tig0026076:34388-34407 | Msa1426840:intergenic | 40.0% | |
| CAGCTGCATACATTTAGACT+TGG | - | tig0026076:34386-34405 | Msa1426840:intron | 40.0% | |
| ATCTTGTGTAATACTCCCTC+CGG | - | tig0026076:34648-34667 | Msa1426840:intron | 40.0% | |
| ACAGAATACATGACTGTGTC+TGG | - | tig0026076:35072-35091 | Msa1426840:CDS | 40.0% | |
| TAACTTCGGTCAACTGCATT+AGG | - | tig0026076:35212-35231 | Msa1426840:intron | 40.0% | |
| AACTTCGGTCAACTGCATTA+GGG | - | tig0026076:35213-35232 | Msa1426840:intron | 40.0% | |
| GTCAATATTCGTTTAGGCGA+TGG | - | tig0026076:35255-35274 | Msa1426840:intron | 40.0% | |
| ! | GTCAGAAGCTCAGAACATTT+TGG | + | tig0026076:35396-35415 | Msa1426840:intergenic | 40.0% |
| AATAAAGCAGACAACGATGG+AGG | + | tig0026076:35439-35458 | Msa1426840:intergenic | 40.0% | |
| GTGAATAAAGCAGACAACGA+TGG | + | tig0026076:35442-35461 | Msa1426840:intergenic | 40.0% | |
| ! | CAGGTATTTGAAGGTACATC+TGG | - | tig0026076:35567-35586 | Msa1426840:intron | 40.0% |
| TTTACGACCGTACAGTTTAC+TGG | - | tig0026076:35603-35622 | Msa1426840:intron | 40.0% | |
| TACCTCTCCAGTAAACTGTA+CGG | + | tig0026076:35613-35632 | Msa1426840:intergenic | 40.0% | |
| ! | TATCATTATCTGGGACGGTT+TGG | + | tig0026076:35879-35898 | Msa1426840:intergenic | 40.0% |
| GCTTAGGTGATAGTTACGAT+TGG | + | tig0026076:35914-35933 | Msa1426840:intergenic | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | + | tig0026076:36565-36584 | Msa1426840:intergenic | 40.0% | |
| AGTTTCTTCACAGGAGTTGT+TGG | + | tig0026076:36691-36710 | Msa1426840:intergenic | 40.0% | |
| ! | CCCCCTTATTCTGGTAATTT+TGG | - | tig0026076:37057-37076 | Msa1426840:intron | 40.0% |
| AGCCATTCAACCATCAATAC+TGG | + | tig0026076:37108-37127 | Msa1426840:intergenic | 40.0% | |
| ACCAAACACATGTGAAGTGT+AGG | - | tig0026076:37345-37364 | Msa1426840:intron | 40.0% | |
| CCAAACACATGTGAAGTGTA+GGG | - | tig0026076:37346-37365 | Msa1426840:intron | 40.0% | |
| GTGATGATACGTTCGATTGT+AGG | + | tig0026076:37620-37639 | Msa1426840:intergenic | 40.0% | |
| CTTCTTGTTCTTGATCCTAC+AGG | - | tig0026076:37962-37981 | Msa1426840:intron | 40.0% | |
| TATCTGGTAAGATCAGGAGT+TGG | + | tig0026076:38243-38262 | Msa1426840:intergenic | 40.0% | |
| AGGGACAGATATACATCGAT+AGG | - | tig0026076:38271-38290 | Msa1426840:intron | 40.0% | |
| TAGGCAGTTGCATAATAGAC+AGG | - | tig0026076:38290-38309 | Msa1426840:intron | 40.0% | |
| CAGTTGCATAATAGACAGGT+GGG | - | tig0026076:38294-38313 | Msa1426840:intron | 40.0% | |
| ATGAATGCCATAAGCCATGT+TGG | - | tig0026076:38340-38359 | Msa1426840:intron | 40.0% | |
| TACAATCAGTCTAAGTGACC+TGG | - | tig0026076:38800-38819 | Msa1426840:intron | 40.0% | |
| ! | GATGGAAGAACATTGATTGG+TGG | + | tig0026076:38880-38899 | Msa1426840:intergenic | 40.0% |
| TTCATCAACCGAGATAGTGA+TGG | + | tig0026076:38898-38917 | Msa1426840:intergenic | 40.0% | |
| !! | ATCACTATCTCGGTTGATGA+AGG | - | tig0026076:38897-38916 | Msa1426840:intron | 40.0% |
| CTGTATGCAACTTATGCCAT+TGG | - | tig0026076:39203-39222 | Msa1426840:intron | 40.0% | |
| TGCAACTTATGCCATTGGAA+AGG | - | tig0026076:39208-39227 | Msa1426840:intron | 40.0% | |
| !! | AGAAGAAGCACTTTCATCTG+AGG | - | tig0026076:39259-39278 | Msa1426840:intron | 40.0% |
| ! | ACGGTTGTATCTGGAATTTC+TGG | - | tig0026076:39384-39403 | Msa1426840:five_prime_UTR | 40.0% |
| ATCTTGCATGGACTTTACTC+CGG | - | tig0026076:39473-39492 | Msa1426840:five_prime_UTR | 40.0% | |
| ! | TACGATGAAGAAGTACACGA+GGG | + | tig0026076:39504-39523 | Msa1426840:intergenic | 40.0% |
| ! | ATACGATGAAGAAGTACACG+AGG | + | tig0026076:39505-39524 | Msa1426840:intergenic | 40.0% |
| GTAAAACTGGTCAAGAGTCT+TGG | + | tig0026076:39533-39552 | Msa1426840:intergenic | 40.0% | |
| TCATAGGGGTGAGCACAAAA+AGG | + | tig0026076:33290-33309 | None:intergenic | 45.0% | |
| CACTTGCAAAAGATGGAGAC+AGG | + | tig0026076:33372-33391 | None:intergenic | 45.0% | |
| ! | CCTTCATTAGCTCTTCATGC+AGG | + | tig0026076:33426-33445 | Msa1426840:intergenic | 45.0% |
| CCTGCATGAAGAGCTAATGA+AGG | - | tig0026076:33423-33442 | Msa1426840:intron | 45.0% | |
| GAAGAGCTAATGAAGGTGAC+TGG | - | tig0026076:33430-33449 | Msa1426840:intron | 45.0% | |
| ATATAAACCCACACTCCCAC+AGG | + | tig0026076:33631-33650 | Msa1426840:intergenic | 45.0% | |
| ! | GACTGGAGCATTAGACAATG+AGG | + | tig0026076:33849-33868 | Msa1426840:intergenic | 45.0% |
| ATTCGCATTGCTTCAAACCC+TGG | + | tig0026076:34033-34052 | Msa1426840:intergenic | 45.0% | |
| CCAAAATAAGCACGACCAAG+AGG | + | tig0026076:34287-34306 | Msa1426840:intergenic | 45.0% | |
| ! | CCTCTTGGTCGTGCTTATTT+TGG | - | tig0026076:34284-34303 | Msa1426840:intron | 45.0% |
| !!! | CTTGGTCGTGCTTATTTTGG+TGG | - | tig0026076:34287-34306 | Msa1426840:intron | 45.0% |
| ! | TGCTTACATTTGAGACCGGA+GGG | + | tig0026076:34666-34685 | Msa1426840:intergenic | 45.0% |
| ! | TTGCTTACATTTGAGACCGG+AGG | + | tig0026076:34667-34686 | Msa1426840:intergenic | 45.0% |
| TGGTTTCTCACATACTCCCT+CGG | + | tig0026076:34802-34821 | Msa1426840:intergenic | 45.0% | |
| ! | AGGGAGTATGTGAGAAACCA+GGG | - | tig0026076:34802-34821 | Msa1426840:CDS | 45.0% |
| ! | ATGACTGTGTCTGGAGTTAC+CGG | - | tig0026076:35081-35100 | Msa1426840:CDS | 45.0% |
| CTCAAGAATGACCAATGGTC+CGG | + | tig0026076:35103-35122 | Msa1426840:intergenic | 45.0% | |
| GGACAAGTTCTCGAGATTGA+TGG | - | tig0026076:35291-35310 | Msa1426840:intron | 45.0% | |
| !! | TCTCGAGATTGATGGCGAAA+AGG | - | tig0026076:35299-35318 | Msa1426840:intron | 45.0% |
| CACATAATTGAGCCGATGGT+TGG | - | tig0026076:35830-35849 | Msa1426840:CDS | 45.0% | |
| !! | ATTATCTGGGACGGTTTGGT+AGG | + | tig0026076:35875-35894 | Msa1426840:intergenic | 45.0% |
| !! | ACAGCAGTTTTGGCATGCTT+AGG | + | tig0026076:35930-35949 | Msa1426840:intergenic | 45.0% |
| TGACATGCAACACAGTCTGA+CGG | + | tig0026076:35959-35978 | Msa1426840:intergenic | 45.0% | |
| ! | CGATAAGGTTACAGTGCTGA+AGG | - | tig0026076:36281-36300 | Msa1426840:intron | 45.0% |
| ATGGATCAGTTATTCCGGGA+CGG | + | tig0026076:36374-36393 | Msa1426840:intergenic | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | - | tig0026076:36567-36586 | Msa1426840:intron | 45.0% | |
| ATCTTGATTTATGCAGGGGG+AGG | - | tig0026076:36873-36892 | Msa1426840:intron | 45.0% | |
| !!! | TGCCATTGTTTTTGCGGCTA+TGG | - | tig0026076:36911-36930 | Msa1426840:intron | 45.0% |
| !!! | GCCATTGTTTTTGCGGCTAT+GGG | - | tig0026076:36912-36931 | Msa1426840:intron | 45.0% |
| TCCCATAGCCGCAAAAACAA+TGG | + | tig0026076:36916-36935 | Msa1426840:intergenic | 45.0% | |
| ! | AAGCGTGACTTTGAGGAGAA+TGG | - | tig0026076:36963-36982 | Msa1426840:intron | 45.0% |
| ! | CTTTGAGGAGAATGGCTCAA+TGG | - | tig0026076:36971-36990 | Msa1426840:intron | 45.0% |
| CCCTACACTTCACATGTGTT+TGG | + | tig0026076:37349-37368 | Msa1426840:intergenic | 45.0% | |
| GCAGTAGTAAGAGCAATACG+AGG | + | tig0026076:37644-37663 | Msa1426840:intergenic | 45.0% | |
| TTATGCTGATGCTCTTCGTG+AGG | - | tig0026076:37724-37743 | Msa1426840:intron | 45.0% | |
| TGAACATGCCGGAAGAATTG+AGG | - | tig0026076:38061-38080 | Msa1426840:intron | 45.0% | |
| GAACATGCCGGAAGAATTGA+GGG | - | tig0026076:38062-38081 | Msa1426840:intron | 45.0% | |
| AACATGCCGGAAGAATTGAG+GGG | - | tig0026076:38063-38082 | Msa1426840:intron | 45.0% | |
| TTTACGCCCCTCAATTCTTC+CGG | + | tig0026076:38072-38091 | Msa1426840:intergenic | 45.0% | |
| CTGTCCCTCCGTAATATATC+TGG | + | tig0026076:38259-38278 | Msa1426840:intergenic | 45.0% | |
| GCAGTTGCATAATAGACAGG+TGG | - | tig0026076:38293-38312 | Msa1426840:intron | 45.0% | |
| TGGCTTATGGCATTCATCAC+AGG | + | tig0026076:38337-38356 | Msa1426840:intergenic | 45.0% | |
| TCATTCTGATGTGTCCAACC+AGG | - | tig0026076:39063-39082 | Msa1426840:intron | 45.0% | |
| CAAACAAGAAGAGACCTGGT+TGG | + | tig0026076:39080-39099 | Msa1426840:intergenic | 45.0% | |
| GGAACAAACAAGAAGAGACC+TGG | + | tig0026076:39084-39103 | Msa1426840:intergenic | 45.0% | |
| ! | GAATATATTGCGGGTGTCGT+AGG | + | tig0026076:39443-39462 | Msa1426840:intergenic | 45.0% |
| TCCAGTCTCTAGATCTTGCA+TGG | - | tig0026076:39461-39480 | Msa1426840:five_prime_UTR | 45.0% | |
| TCCATGCAAGATCTAGAGAC+TGG | + | tig0026076:39465-39484 | Msa1426840:intergenic | 45.0% | |
| GAAGTACACGAGGGAAAATC+CGG | + | tig0026076:39495-39514 | Msa1426840:intergenic | 45.0% | |
| !!! | ATTATAATTTTTTTAATAAG+GGG | + | tig0026076:37511-37530 | Msa1426840:intergenic | 5.0% |
| !!! | CATTATAATTTTTTTAATAA+GGG | + | tig0026076:37512-37531 | Msa1426840:intergenic | 5.0% |
| !!! | TCATTATAATTTTTTTAATA+AGG | + | tig0026076:37513-37532 | Msa1426840:intergenic | 5.0% |
| ! | ATTAGCTCTTCATGCAGGCG+AGG | + | tig0026076:33421-33440 | Msa1426840:intergenic | 50.0% |
| AGTAGGCTGAACTGCACTTG+TGG | - | tig0026076:33596-33615 | Msa1426840:intron | 50.0% | |
| TTGTGGCAAGCTCTTCCTGT+GGG | - | tig0026076:33613-33632 | Msa1426840:intron | 50.0% | |
| !! | AGAGCTTGGTGTAGTCCTCT+TGG | - | tig0026076:34269-34288 | Msa1426840:intron | 50.0% |
| ! | TTGCCTACATTTGAGACCCG+AGG | - | tig0026076:34782-34801 | Msa1426840:CDS | 50.0% |
| ! | TGCCTACATTTGAGACCCGA+GGG | - | tig0026076:34783-34802 | Msa1426840:CDS | 50.0% |
| GGTTTCTCACATACTCCCTC+GGG | + | tig0026076:34801-34820 | Msa1426840:intergenic | 50.0% | |
| ! | GAGGGAGTATGTGAGAAACC+AGG | - | tig0026076:34801-34820 | Msa1426840:CDS | 50.0% |
| GTTTAGGCGATGGAACTACC+CGG | - | tig0026076:35265-35284 | Msa1426840:intron | 50.0% | |
| TCTCGAGAACTTGTCCATGC+CGG | + | tig0026076:35287-35306 | Msa1426840:intergenic | 50.0% | |
| TGGCGAAAAGGCTGTTGTTC+AGG | - | tig0026076:35311-35330 | Msa1426840:intron | 50.0% | |
| GACCGTACAGTTTACTGGAG+AGG | - | tig0026076:35608-35627 | Msa1426840:intron | 50.0% | |
| ! | ACGGGGGATAACAGCAGTTT+TGG | + | tig0026076:35940-35959 | Msa1426840:intergenic | 50.0% |
| ACATGCAACACAGTCTGACG+GGG | + | tig0026076:35957-35976 | Msa1426840:intergenic | 50.0% | |
| GACATGCAACACAGTCTGAC+GGG | + | tig0026076:35958-35977 | Msa1426840:intergenic | 50.0% | |
| AGCCTGACGACAAATCTGTG+CGG | + | tig0026076:36028-36047 | Msa1426840:intergenic | 50.0% | |
| ATCAGTTATTCCGGGACGGA+GGG | + | tig0026076:36370-36389 | Msa1426840:intergenic | 50.0% | |
| ATCATACACTACCTCCGTCC+CGG | + | tig0026076:36584-36603 | Msa1426840:intergenic | 50.0% | |
| TGCGGCTATGGGAGTTAACA+TGG | - | tig0026076:36923-36942 | Msa1426840:intron | 50.0% | |
| ! | GGAAGAATTGAGGGGCGTAA+AGG | - | tig0026076:38071-38090 | Msa1426840:intron | 50.0% |
| ! | TCACCACTGCAGAGTGCTAT+TGG | - | tig0026076:39019-39038 | Msa1426840:intron | 50.0% |
| ! | CACCACTGCAGAGTGCTATT+GGG | - | tig0026076:39020-39039 | Msa1426840:intron | 50.0% |
| ! | ACCACTGCAGAGTGCTATTG+GGG | - | tig0026076:39021-39040 | Msa1426840:intron | 50.0% |
| TGGGGAGGGAATGACTAGAA+AGG | - | tig0026076:39039-39058 | Msa1426840:intron | 50.0% | |
| TGCCATTGGAAAGGATGTCC+AGG | - | tig0026076:39217-39236 | Msa1426840:intron | 50.0% | |
| TGCCTGGACATCCTTTCCAA+TGG | + | tig0026076:39222-39241 | Msa1426840:intergenic | 50.0% | |
| AGCACTTTCATCTGAGGACC+TGG | - | tig0026076:39265-39284 | Msa1426840:intron | 50.0% | |
| AACTGGTCAAGAGTCTTGGC+TGG | + | tig0026076:39529-39548 | Msa1426840:intergenic | 50.0% | |
| CTTGTGGCAAGCTCTTCCTG+TGG | - | tig0026076:33612-33631 | Msa1426840:intron | 55.0% | |
| AAGCTCTTCCTGTGGGAGTG+TGG | - | tig0026076:33620-33639 | Msa1426840:intron | 55.0% | |
| ! | AGCTCTTCCTGTGGGAGTGT+GGG | - | tig0026076:33621-33640 | Msa1426840:intron | 55.0% |
| ATGCAGCTGGGAACACGTTC+AGG | + | tig0026076:34375-34394 | Msa1426840:intergenic | 55.0% | |
| CTCCCTCGGGTCTCAAATGT+AGG | + | tig0026076:34788-34807 | Msa1426840:intergenic | 55.0% | |
| ! | GTCTGGAGTTACCGGACCAT+TGG | - | tig0026076:35089-35108 | Msa1426840:CDS | 55.0% |
| CTCGAGAACTTGTCCATGCC+GGG | + | tig0026076:35286-35305 | Msa1426840:intergenic | 55.0% | |
| CATGCAACACAGTCTGACGG+GGG | + | tig0026076:35956-35975 | Msa1426840:intergenic | 55.0% | |
| TGCCGCACAGATTTGTCGTC+AGG | - | tig0026076:36023-36042 | Msa1426840:intron | 55.0% | |
| GCACAGATTTGTCGTCAGGC+TGG | - | tig0026076:36027-36046 | Msa1426840:intron | 55.0% | |
| GATCAGTTATTCCGGGACGG+AGG | + | tig0026076:36371-36390 | Msa1426840:intergenic | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | - | tig0026076:36570-36589 | Msa1426840:intron | 55.0% | |
| CTCTGGCAGCAGATACCTGT+AGG | + | tig0026076:37980-37999 | Msa1426840:intergenic | 55.0% | |
| GGTATCTGCTGCCAGAGAAG+AGG | - | tig0026076:37983-38002 | Msa1426840:intron | 55.0% | |
| TCTTCCTGGCACCTCTTCTC+TGG | + | tig0026076:37997-38016 | Msa1426840:intergenic | 55.0% | |
| CCAGGATAACCACGTCTTCC+TGG | + | tig0026076:38011-38030 | Msa1426840:intergenic | 55.0% | |
| CCAGGAAGACGTGGTTATCC+TGG | - | tig0026076:38008-38027 | Msa1426840:intron | 55.0% | |
| TCCCCAATAGCACTCTGCAG+TGG | + | tig0026076:39025-39044 | Msa1426840:intergenic | 55.0% | |
| ! | ACTGCAGAGTGCTATTGGGG+AGG | - | tig0026076:39024-39043 | Msa1426840:intron | 55.0% |
| ! | CTGCAGAGTGCTATTGGGGA+GGG | - | tig0026076:39025-39044 | Msa1426840:intron | 55.0% |
| CAACGACAGCTTTCGTTGCC+TGG | + | tig0026076:39238-39257 | Msa1426840:intergenic | 55.0% | |
| CAGGCAACGAAAGCTGTCGT+TGG | - | tig0026076:39236-39255 | Msa1426840:intron | 55.0% | |
| TGAGAGGAAGTCTGTTGCCC+AGG | - | tig0026076:39414-39433 | Msa1426840:five_prime_UTR | 55.0% | |
| GAGAGGAAGTCTGTTGCCCA+GGG | - | tig0026076:39415-39434 | Msa1426840:five_prime_UTR | 55.0% | |
| !! | ATGCAGGCGAGGTGCTGTCT+CGG | + | tig0026076:33410-33429 | Msa1426840:intergenic | 60.0% |
| CAATGCTACTCCCTCCGTCC+CGG | - | tig0026076:36357-36376 | Msa1426840:intron | 60.0% | |
| !! | GAAGAGGTGCCAGGAAGACG+TGG | - | tig0026076:37999-38018 | Msa1426840:intron | 60.0% |
| GGCGATGGAACTACCCGGCA+TGG | - | tig0026076:35270-35289 | Msa1426840:intron | 65.0% | |
| !! | GCTGCCAGAGAAGAGGTGCC+AGG | - | tig0026076:37990-38009 | Msa1426840:intron | 65.0% |
| ! | GCGGGTGTCGTAGGCTCCCT+GGG | + | tig0026076:39434-39453 | Msa1426840:intergenic | 70.0% |
| ! | TGCGGGTGTCGTAGGCTCCC+TGG | + | tig0026076:39435-39454 | Msa1426840:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026076 | gene | 33246 | 39561 | 33246 | ID=Msa1426840;Name=Msa1426840 |
| tig0026076 | mRNA | 33246 | 39561 | 33246 | ID=Msa1426840-mRNA-1;Parent=Msa1426840;Name=Msa1426840-mRNA-1;_AED=0.25;_eAED=0.27;_QI=193|0.54|0.58|1|0.72|0.83|12|0|376 |
| tig0026076 | exon | 33246 | 33395 | 33246 | ID=Msa1426840-mRNA-1:exon:5129;Parent=Msa1426840-mRNA-1 |
| tig0026076 | exon | 33458 | 33604 | 33458 | ID=Msa1426840-mRNA-1:exon:5128;Parent=Msa1426840-mRNA-1 |
| tig0026076 | exon | 33889 | 33936 | 33889 | ID=Msa1426840-mRNA-1:exon:5127;Parent=Msa1426840-mRNA-1 |
| tig0026076 | exon | 34496 | 34578 | 34496 | ID=Msa1426840-mRNA-1:exon:5126;Parent=Msa1426840-mRNA-1 |
| tig0026076 | exon | 34673 | 34823 | 34673 | ID=Msa1426840-mRNA-1:exon:5125;Parent=Msa1426840-mRNA-1 |
| tig0026076 | exon | 35062 | 35199 | 35062 | ID=Msa1426840-mRNA-1:exon:5124;Parent=Msa1426840-mRNA-1 |
| tig0026076 | exon | 35788 | 35918 | 35788 | ID=Msa1426840-mRNA-1:exon:5123;Parent=Msa1426840-mRNA-1 |
| tig0026076 | exon | 37191 | 37227 | 37191 | ID=Msa1426840-mRNA-1:exon:5122;Parent=Msa1426840-mRNA-1 |
| tig0026076 | exon | 37475 | 37573 | 37475 | ID=Msa1426840-mRNA-1:exon:5121;Parent=Msa1426840-mRNA-1 |
| tig0026076 | exon | 37676 | 37731 | 37676 | ID=Msa1426840-mRNA-1:exon:5120;Parent=Msa1426840-mRNA-1 |
| tig0026076 | exon | 38457 | 38538 | 38457 | ID=Msa1426840-mRNA-1:exon:5119;Parent=Msa1426840-mRNA-1 |
| tig0026076 | exon | 39363 | 39561 | 39363 | ID=Msa1426840-mRNA-1:exon:5118;Parent=Msa1426840-mRNA-1 |
| tig0026076 | five_prime_UTR | 39369 | 39561 | 39369 | ID=Msa1426840-mRNA-1:five_prime_utr;Parent=Msa1426840-mRNA-1 |
| tig0026076 | CDS | 39363 | 39368 | 39363 | ID=Msa1426840-mRNA-1:cds;Parent=Msa1426840-mRNA-1 |
| tig0026076 | CDS | 38457 | 38538 | 38457 | ID=Msa1426840-mRNA-1:cds;Parent=Msa1426840-mRNA-1 |
| tig0026076 | CDS | 37676 | 37731 | 37676 | ID=Msa1426840-mRNA-1:cds;Parent=Msa1426840-mRNA-1 |
| tig0026076 | CDS | 37475 | 37573 | 37475 | ID=Msa1426840-mRNA-1:cds;Parent=Msa1426840-mRNA-1 |
| tig0026076 | CDS | 37191 | 37227 | 37191 | ID=Msa1426840-mRNA-1:cds;Parent=Msa1426840-mRNA-1 |
| tig0026076 | CDS | 35788 | 35918 | 35788 | ID=Msa1426840-mRNA-1:cds;Parent=Msa1426840-mRNA-1 |
| tig0026076 | CDS | 35062 | 35199 | 35062 | ID=Msa1426840-mRNA-1:cds;Parent=Msa1426840-mRNA-1 |
| tig0026076 | CDS | 34673 | 34823 | 34673 | ID=Msa1426840-mRNA-1:cds;Parent=Msa1426840-mRNA-1 |
| tig0026076 | CDS | 34496 | 34578 | 34496 | ID=Msa1426840-mRNA-1:cds;Parent=Msa1426840-mRNA-1 |
| tig0026076 | CDS | 33889 | 33936 | 33889 | ID=Msa1426840-mRNA-1:cds;Parent=Msa1426840-mRNA-1 |
| tig0026076 | CDS | 33458 | 33604 | 33458 | ID=Msa1426840-mRNA-1:cds;Parent=Msa1426840-mRNA-1 |
| tig0026076 | CDS | 33246 | 33395 | 33246 | ID=Msa1426840-mRNA-1:cds;Parent=Msa1426840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
