AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0041790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0041790 MtrunA17_Chr1g0207461 98.720 625 8 0 1 625 1 625 0.0 1264
Msa0041790 MtrunA17_Chr5g0401341 62.323 637 221 9 1 625 1 630 0.0 748
Msa0041790 MtrunA17_Chr1g0150191 55.397 491 211 6 1 487 1 487 0.0 538
Msa0041790 MtrunA17_Chr8g0367891 42.357 628 282 15 1 588 1 588 9.69e-138 414
Msa0041790 MtrunA17_Chr5g0412591 40.406 542 253 8 1 507 1 507 6.31e-126 384
Msa0041790 MtrunA17_Chr4g0076521 39.679 499 262 7 1 486 1 473 7.07e-123 376
Msa0041790 MtrunA17_Chr2g0279481 37.542 594 308 15 5 546 23 605 1.28e-121 375
Msa0041790 MtrunA17_Chr4g0050021 37.828 534 285 8 5 497 23 550 6.13e-120 371
Msa0041790 MtrunA17_Chr2g0303541 39.042 543 298 9 1 518 1 535 3.68e-116 360
Msa0041790 MtrunA17_Chr2g0290741 36.811 508 274 7 1 496 1 473 1.08e-113 352
Msa0041790 MtrunA17_Chr2g0285511 37.721 509 293 9 1 492 1 502 1.19e-107 337
Msa0041790 MtrunA17_Chr1g0181181 35.263 570 312 14 1 546 1 537 1.85e-105 330
Msa0041790 MtrunA17_Chr5g0401451 39.024 492 260 13 25 499 37 505 4.92e-105 331
Msa0041790 MtrunA17_Chr8g0382231 32.517 572 282 14 18 546 42 552 5.94e-100 318
Msa0041790 MtrunA17_Chr2g0320691 34.622 543 311 10 13 528 10 535 2.39e-98 313
Msa0041790 MtrunA17_Chr4g0010091 35.581 534 318 10 23 546 29 546 2.34e-96 308
Msa0041790 MtrunA17_Chr4g0053841 36.660 491 280 9 25 499 10 485 3.96e-95 304
Msa0041790 MtrunA17_Chr1g0195911 35.185 540 303 11 26 549 34 542 1.05e-93 301
Msa0041790 MtrunA17_Chr8g0374011 36.346 509 272 13 23 488 15 514 3.83e-91 295
Msa0041790 MtrunA17_Chr7g0268781 35.009 537 319 11 26 546 34 556 9.31e-89 288
Msa0041790 MtrunA17_Chr7g0245201 35.081 496 285 11 18 496 51 526 1.14e-84 278
Msa0041790 MtrunA17_Chr1g0199631 36.069 463 272 12 46 492 8 462 4.07e-83 272
Msa0041790 MtrunA17_Chr3g0108331 34.440 482 266 10 25 493 21 465 1.42e-82 270
Msa0041790 MtrunA17_Chr5g0432861 32.193 497 280 8 25 499 22 483 1.59e-79 262
Msa0041790 MtrunA17_Chr1g0191711 28.727 550 312 11 11 546 43 526 3.93e-78 258
Msa0041790 MtrunA17_Chr2g0332281 39.617 313 152 6 213 506 24 318 1.43e-59 205
Msa0041790 MtrunA17_Chr4g0003891 33.659 410 229 9 207 605 40 417 1.14e-57 201
Msa0041790 MtrunA17_Chr4g0023801 28.256 453 286 13 74 518 52 473 6.37e-41 156
Msa0041790 MtrunA17_Chr4g0037661 26.477 491 312 14 29 493 4 471 4.19e-39 151
Msa0041790 MtrunA17_Chr1g0163311 27.088 491 284 17 31 486 6 457 1.54e-36 143
Msa0041790 MtrunA17_Chr2g0280541 27.907 387 242 12 96 475 3 359 1.35e-28 119
Msa0041790 MtrunA17_Chr1g0206621 37.857 140 85 1 32 169 72 211 2.23e-25 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0041790 AT2G14820.2 61.551 593 207 8 1 584 1 581 0.0 727
Msa0041790 AT2G14820.1 61.551 593 207 8 1 584 1 581 0.0 727
Msa0041790 AT4G37590.1 50.163 612 228 14 1 594 1 553 0.0 550
Msa0041790 AT5G67440.3 49.596 619 244 14 1 608 1 562 0.0 534
Msa0041790 AT5G67440.1 49.596 619 244 14 1 608 1 562 0.0 534
Msa0041790 AT2G23050.1 56.225 498 170 9 1 493 1 455 0.0 523
Msa0041790 AT4G31820.1 50.101 495 221 7 1 492 1 472 3.86e-162 476
Msa0041790 AT5G67440.2 48.007 577 233 13 43 608 5 525 3.30e-160 470
Msa0041790 AT4G31820.2 48.655 446 204 6 55 497 1 424 4.83e-136 408
Msa0041790 AT1G67900.5 42.701 548 266 10 1 512 1 536 9.00e-136 411
Msa0041790 AT1G67900.1 42.701 548 266 10 1 512 1 536 9.00e-136 411
Msa0041790 AT1G67900.3 42.701 548 266 10 1 512 1 536 9.00e-136 411
Msa0041790 AT1G67900.6 42.701 548 266 10 1 512 1 536 9.00e-136 411
Msa0041790 AT1G67900.2 42.701 548 266 10 1 512 1 536 9.00e-136 411
Msa0041790 AT1G67900.4 42.701 548 266 10 1 512 1 536 9.00e-136 411
Msa0041790 AT2G23050.2 52.756 381 138 6 113 493 1 339 5.62e-125 374
Msa0041790 AT5G47800.3 39.034 497 269 8 1 486 1 474 1.55e-121 372
Msa0041790 AT5G47800.1 39.034 497 269 8 1 486 1 474 1.55e-121 372
Msa0041790 AT5G47800.4 39.034 497 269 8 1 486 1 474 1.55e-121 372
Msa0041790 AT3G26490.1 40.421 522 272 9 1 493 1 512 1.72e-121 372
Msa0041790 AT3G26490.3 40.421 522 272 9 1 493 1 512 1.72e-121 372
Msa0041790 AT3G26490.4 40.421 522 272 9 1 493 1 512 1.72e-121 372
Msa0041790 AT5G47800.2 39.034 497 269 8 1 486 114 587 6.19e-120 371
Msa0041790 AT5G03250.1 36.237 574 319 15 1 547 1 554 7.38e-108 337
Msa0041790 AT5G13600.1 38.132 514 279 15 1 492 1 497 7.03e-105 330
Msa0041790 AT1G30440.1 37.739 522 285 12 1 492 1 512 1.71e-103 328
Msa0041790 AT3G26490.2 39.056 466 245 9 1 437 1 456 3.19e-99 312
Msa0041790 AT5G67385.1 37.728 493 275 10 7 488 3 474 4.52e-98 312
Msa0041790 AT3G44820.1 34.489 519 302 9 8 494 5 517 8.00e-95 305
Msa0041790 AT1G03010.1 36.170 564 303 15 18 546 22 563 7.75e-94 302
Msa0041790 AT1G03010.2 36.594 552 297 14 26 546 7 536 1.50e-93 300
Msa0041790 AT1G03010.3 36.511 556 300 14 22 546 29 562 2.13e-93 301
Msa0041790 AT5G48800.1 34.522 533 315 9 23 546 36 543 5.39e-93 299
Msa0041790 AT2G47860.1 33.877 552 309 12 22 546 31 553 1.38e-88 288
Msa0041790 AT5G10250.2 34.585 506 247 12 23 488 45 506 2.74e-88 287
Msa0041790 AT5G66560.1 33.333 564 286 14 23 509 14 564 9.38e-88 287
Msa0041790 AT5G67385.4 38.000 450 248 9 49 488 1 429 2.01e-87 283
Msa0041790 AT5G67385.5 38.000 450 248 9 49 488 1 429 2.01e-87 283
Msa0041790 AT5G67385.2 38.000 450 248 9 49 488 1 429 2.01e-87 283
Msa0041790 AT5G67385.3 38.000 450 248 9 49 488 1 429 2.01e-87 283
Msa0041790 AT3G08660.1 36.089 496 269 14 8 496 21 475 6.13e-87 282
Msa0041790 AT5G10250.1 34.747 495 246 12 23 488 45 491 4.18e-85 278
Msa0041790 AT5G66560.3 33.516 546 273 14 41 509 3 535 1.85e-84 278
Msa0041790 AT2G30520.1 34.100 478 266 10 25 488 27 469 3.30e-84 276
Msa0041790 AT2G47860.3 32.522 575 309 13 22 546 31 576 2.39e-83 275
Msa0041790 AT3G08570.1 34.304 481 280 10 24 488 30 490 2.23e-82 271
Msa0041790 AT5G66560.4 35.443 474 260 12 69 509 65 525 2.79e-82 271
Msa0041790 AT3G49970.1 38.549 441 210 12 41 473 7 394 3.97e-81 265
Msa0041790 AT3G49970.2 38.549 441 210 12 41 473 7 394 3.97e-81 265
Msa0041790 AT3G50840.1 34.639 485 262 10 23 488 11 459 6.37e-77 256
Msa0041790 AT3G08660.3 36.636 434 235 12 70 496 15 415 1.81e-76 253
Msa0041790 AT2G30520.2 34.066 455 251 10 48 488 2 421 2.56e-76 253
Msa0041790 AT2G30520.3 34.066 455 251 10 48 488 2 421 2.56e-76 253
Msa0041790 AT5G03250.2 34.354 457 263 12 113 547 1 442 1.02e-69 234
Msa0041790 AT2G47860.4 33.864 440 240 10 22 437 31 443 5.33e-68 228
Msa0041790 AT3G50840.2 33.987 459 248 10 49 488 1 423 2.73e-67 229
Msa0041790 AT3G50840.3 33.987 459 248 10 49 488 1 423 2.73e-67 229
Msa0041790 AT3G08660.2 34.633 436 238 13 8 437 21 415 1.76e-66 224
Msa0041790 AT5G66560.2 32.359 479 247 13 23 437 14 479 4.07e-64 219
Msa0041790 AT2G47860.6 32.181 463 240 11 22 437 31 466 7.31e-63 215
Msa0041790 AT2G47860.5 32.755 461 257 11 113 546 1 435 7.76e-59 206
Msa0041790 AT2G47860.2 32.755 461 257 11 113 546 1 435 7.76e-59 206
Msa0041790 AT5G64330.2 38.376 271 145 4 7 260 33 298 9.68e-57 203
Msa0041790 AT5G64330.2 42.308 234 118 3 271 488 373 605 7.58e-51 187
Msa0041790 AT5G64330.1 38.376 271 145 4 7 260 33 298 3.16e-56 203
Msa0041790 AT5G64330.1 41.772 237 115 4 271 488 373 605 8.39e-51 188
Msa0041790 AT1G52770.1 37.458 299 151 4 213 493 28 308 9.90e-54 190
Msa0041790 AT5G64330.3 42.308 234 118 3 271 488 314 546 2.64e-51 187
Msa0041790 AT5G64330.3 37.344 241 130 4 38 260 2 239 4.41e-46 172
Msa0041790 AT5G48130.1 26.210 599 376 18 28 608 39 589 9.21e-49 180
Msa0041790 AT3G15570.1 35.235 298 153 4 213 488 29 308 4.25e-48 175
Msa0041790 AT5G17580.2 27.664 488 310 14 11 488 3 457 1.53e-43 164
Msa0041790 AT5G17580.1 27.975 479 294 14 24 488 1 442 4.61e-42 160
Msa0041790 AT3G19850.1 26.484 438 277 11 70 487 52 464 1.65e-40 155
Msa0041790 AT3G03510.1 27.644 416 234 12 80 488 6 361 4.54e-36 141
Msa0041790 AT1G50280.1 25.895 475 296 15 37 482 13 460 7.24e-34 136
Msa0041790 AT1G50280.2 26.364 440 273 14 67 482 15 427 5.07e-33 133
Msa0041790 AT3G22104.1 24.615 455 294 12 29 473 5 420 1.35e-31 129
Msa0041790 AT3G22104.4 23.499 383 243 9 100 473 4 345 1.48e-22 101
Msa0041790 AT3G22104.2 23.499 383 243 9 100 473 4 345 1.48e-22 101
Msa0041790 AT3G22104.3 23.499 383 243 9 100 473 4 345 1.48e-22 101
Msa0041790 AT3G49900.1 28.028 289 156 12 279 547 126 382 7.03e-15 78.2
Msa0041790 AT3G49900.2 27.740 292 156 13 279 547 126 385 3.54e-13 72.8

Find 151 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGAATTCCTCCTATTTC+TGG 0.150173 1_1:-72316787 None:intergenic
GTACCACAACATTGAATTTC+TGG 0.184041 1_1:-72311759 None:intergenic
ATCATACCCTTGCTGAAATT+TGG 0.196113 1_1:-72315544 None:intergenic
TTCTCTCTTCACCCTTCTTC+TGG 0.209501 1_1:+72311940 Msa0041790:five_prime_UTR
CGTCTCATGATGGCCTTTAC+AGG 0.230035 1_1:+72316046 Msa0041790:CDS
GGTGTAGATTTAACTTCTTC+AGG 0.238087 1_1:-72316762 None:intergenic
AAATCTGACAATGGTAAATT+AGG 0.245080 1_1:-72315985 None:intergenic
ATTCAATCTAATGATGTAAT+TGG 0.274781 1_1:+72315487 Msa0041790:CDS
AACATGGATAAGGCTGTTAT+TGG 0.275085 1_1:+72316624 Msa0041790:CDS
TTCGAGTTCTAACTCCATTC+TGG 0.292794 1_1:-72315375 None:intergenic
ATTAAAGACACTCATGTATT+AGG 0.293306 1_1:+72311799 Msa0041790:five_prime_UTR
TTGAGTTACCATCTTCTTAG+AGG 0.298279 1_1:+72313227 Msa0041790:five_prime_UTR
AAGTATATATAGTTTAAAAT+AGG 0.311056 1_1:+72316940 Msa0041790:three_prime_UTR
TATGTAGGGATGTTTGAATT+AGG 0.319470 1_1:+72313169 Msa0041790:intron
TTGATTCCTTTAGCTATGTC+TGG 0.324835 1_1:-72316429 None:intergenic
CAGTGTTTCGTGTAGGTTCT+TGG 0.326862 1_1:+72315639 Msa0041790:CDS
TCTTCAACCCACCAGTCTTT+TGG 0.329870 1_1:-72315403 None:intergenic
TCTGTAAGCATAAGCTTTCA+AGG 0.351574 1_1:-72315515 None:intergenic
AATCTACACCATCCAGAAAT+AGG 0.361267 1_1:+72316775 Msa0041790:CDS
CCATCAGTCTGAAATGTATC+TGG 0.381210 1_1:-72313300 None:intergenic
ATAACAGCCTTATCCATGTT+TGG 0.388738 1_1:-72316621 None:intergenic
GGGGACAGCTGAGGAATTAA+AGG 0.396543 1_1:+72316524 Msa0041790:CDS
ATCATTAGATTGAATTTCCT+TGG 0.398466 1_1:-72315479 None:intergenic
GCACCATCCGTGTCATATTC+CGG 0.403601 1_1:-72316501 None:intergenic
AGTTTCCTAAAAGTAGCTAT+TGG 0.407465 1_1:+72316806 Msa0041790:exon
TACCACAACATTGAATTTCT+GGG 0.408567 1_1:-72311758 None:intergenic
GAAGAGTATATGCCAGCTAA+TGG 0.411454 1_1:+72316278 Msa0041790:CDS
TCACAATTCCGAGATTGAAT+TGG 0.413050 1_1:+72315852 Msa0041790:CDS
TGTAGTCTGAAGAAGGATAA+TGG 0.416115 1_1:-72315200 None:intergenic
AAACATCAATCTTGAAAAGA+AGG 0.416197 1_1:-72315141 None:intergenic
ACACGAAACACTGCCTTTCT+CGG 0.422062 1_1:-72315629 None:intergenic
CAGATATTATTGTTAGCATA+GGG 0.425779 1_1:+72314303 Msa0041790:CDS
GTCAGAACCGCTGCGTCATC+GGG 0.436682 1_1:+72316396 Msa0041790:CDS
TTTGTTGTTGTTGCTTGCTA+AGG 0.436719 1_1:-72311830 None:intergenic
GGTCAGAACCGCTGCGTCAT+CGG 0.438094 1_1:+72316395 Msa0041790:CDS
CTGATGGGAACAACAATGTT+AGG 0.441088 1_1:+72313316 Msa0041790:CDS
AAGATGAAGTTTATGAAACT+TGG 0.441776 1_1:+72313270 Msa0041790:exon
GAATCAAAGACCTGAGCATT+GGG 0.443547 1_1:+72316445 Msa0041790:CDS
AGAAGTCTTTCATTAAGCTA+TGG 0.447436 1_1:+72316673 Msa0041790:CDS
TACAAAGTCTTTGTCACCAT+TGG 0.450362 1_1:+72315219 Msa0041790:CDS
GAAGTCTTTCATTAAGCTAT+GGG 0.452509 1_1:+72316674 Msa0041790:CDS
AATCACATTGTAAGCATTGA+GGG 0.462223 1_1:-72315062 None:intergenic
GATGTGCTAGTAAAGAGAAT+TGG 0.464303 1_1:+72315712 Msa0041790:CDS
AAGTTGTTGCCTTCCGAGAA+AGG 0.469404 1_1:+72315616 Msa0041790:CDS
CTTACAATGTGATTGCTACT+AGG 0.469814 1_1:+72315071 Msa0041790:CDS
GTGTAGATTTAACTTCTTCA+GGG 0.472605 1_1:-72316761 None:intergenic
ATTCAAATTTCAGACATTCC+TGG 0.473762 1_1:+72314986 Msa0041790:CDS
GAGAATTGGTCAGCAATTAG+AGG 0.476150 1_1:+72315726 Msa0041790:CDS
ACCATTGGATGAGGAGCAAA+AGG 0.477736 1_1:+72315234 Msa0041790:CDS
CTCGAAATGTGCCAAAAGAC+TGG 0.478657 1_1:+72315392 Msa0041790:CDS
TACATTGTAATCTCTCCATC+TGG 0.481738 1_1:-72315781 None:intergenic
GTATAGTACAGAAAATTGTA+AGG 0.482058 1_1:+72315812 Msa0041790:CDS
GTCTTTGTCACCATTGGATG+AGG 0.486439 1_1:+72315225 Msa0041790:CDS
TTTCACCTTTGCTGATACCA+GGG 0.486873 1_1:-72316254 None:intergenic
GTTGGAAACAGTTTCAAAGA+TGG 0.488525 1_1:+72316588 Msa0041790:CDS
TGCTAAACCAAACATGGATA+AGG 0.489081 1_1:+72316614 Msa0041790:CDS
CCAGATACATTTCAGACTGA+TGG 0.490097 1_1:+72313300 Msa0041790:CDS
GAATATGACACGGATGGTGC+GGG 0.491251 1_1:+72316504 Msa0041790:CDS
GCTTTCTGCAATCCATTAGC+TGG 0.493502 1_1:-72316290 None:intergenic
TCAGATATTATTGTTAGCAT+AGG 0.494172 1_1:+72314302 Msa0041790:CDS
TTTAGTTTCTTTATGTCAAG+AGG 0.496730 1_1:+72316877 Msa0041790:three_prime_UTR
GGCTATTGACACATATTTGA+AGG 0.499410 1_1:+72316068 Msa0041790:CDS
GGAATCAAAGACCTGAGCAT+TGG 0.502284 1_1:+72316444 Msa0041790:CDS
GAGATTGAATTGGTTGGAGG+TGG 0.502864 1_1:+72315862 Msa0041790:CDS
AGTCTGAAATGTATCTGGCT+TGG 0.503488 1_1:-72313295 None:intergenic
AATTCCGAGATTGAATTGGT+TGG 0.507004 1_1:+72315856 Msa0041790:CDS
AGGTGTGCAGCAGAGTATCT+TGG 0.508603 1_1:+72315091 Msa0041790:CDS
ATGCATGAAAACATTGAGAA+AGG 0.510465 1_1:+72315115 Msa0041790:CDS
TCCGAGATTGAATTGGTTGG+AGG 0.510666 1_1:+72315859 Msa0041790:CDS
GTTGGAGGTGGCGAACTTGA+AGG 0.511286 1_1:+72315874 Msa0041790:CDS
TCCCGACCTTGAGCTACCGT+TGG 0.511760 1_1:-72316469 None:intergenic
ATCAGATGCCTCTAAGCTGA+TGG 0.515822 1_1:+72315918 Msa0041790:CDS
AGTTCTAACTCCATTCTGGT+TGG 0.516845 1_1:-72315371 None:intergenic
CATTGAATCTATAGCAAACA+AGG 0.517035 1_1:+72315270 Msa0041790:CDS
CTTTCAGGTAAACCAGAAGA+AGG 0.517351 1_1:-72311952 None:intergenic
ATGTGTCAATAGCCCTGTAA+AGG 0.517885 1_1:-72316059 None:intergenic
TCAAAGGCACTTGCACCGCC+AGG 0.525194 1_1:-72315004 None:intergenic
GGAATTAAAGGCATTAAGAA+AGG 0.526651 1_1:+72316536 Msa0041790:CDS
GGCTTTGAGTCCAACCAGAA+TGG 0.526969 1_1:+72315361 Msa0041790:CDS
TACCGTTGGACCCAATGCTC+AGG 0.527764 1_1:-72316455 None:intergenic
CTTGAAGGGATAAGAAAGCC+GGG 0.528275 1_1:+72315889 Msa0041790:CDS
ATCTCTCGTCCGTCTCATGA+TGG 0.528536 1_1:+72316036 Msa0041790:CDS
AAGGTCGGGAACAACTAATC+CGG 0.530475 1_1:+72316482 Msa0041790:CDS
TGCTTTGACACATCCTCACA+TGG 0.533200 1_1:-72315568 None:intergenic
TTGAGACAAAGCAACGGAGT+TGG 0.534244 1_1:+72316570 Msa0041790:CDS
TCCAACGGTAGCTCAAGGTC+GGG 0.534974 1_1:+72316468 Msa0041790:CDS
TCTACTTTCCTCTAAGAAGA+TGG 0.536078 1_1:-72313235 None:intergenic
GAGGCATCTGATAAAATCCC+CGG 0.536394 1_1:-72315907 None:intergenic
ACCTCCAACCAATTCAATCT+CGG 0.540022 1_1:-72315860 None:intergenic
CAACTCATGTAGTAAAACCT+TGG 0.543822 1_1:+72316979 Msa0041790:three_prime_UTR
CAATCACATTGTAAGCATTG+AGG 0.552608 1_1:-72315063 None:intergenic
ACTTGAAGGGATAAGAAAGC+CGG 0.555989 1_1:+72315888 Msa0041790:CDS
AAGACTTTGTAGTCTGAAGA+AGG 0.556254 1_1:-72315207 None:intergenic
GACCTGAGCATTGGGTCCAA+CGG 0.556700 1_1:+72316453 Msa0041790:CDS
TTGGAGGTGGCGAACTTGAA+GGG 0.557828 1_1:+72315875 Msa0041790:CDS
GGAGGACATGGAGAAAATAG+TGG 0.561699 1_1:+72316705 Msa0041790:CDS
GTCCAACGGTAGCTCAAGGT+CGG 0.564380 1_1:+72316467 Msa0041790:CDS
AAGCTATGGGCAAGCAAAGG+AGG 0.564447 1_1:+72316687 Msa0041790:CDS
ACCGACACGTGTAATTGTGC+AGG 0.570689 1_1:+72316356 Msa0041790:CDS
GAGATTACAATGTATGATGT+TGG 0.570865 1_1:+72315790 Msa0041790:CDS
GAATTCCTCCTATTTCTGGA+TGG 0.571158 1_1:-72316783 None:intergenic
CAGATACATTTCAGACTGAT+GGG 0.573177 1_1:+72313301 Msa0041790:CDS
GAAACACTGCCTTTCTCGGA+AGG 0.575743 1_1:-72315625 None:intergenic
TGGGCAAGCAAAGGAGGACA+TGG 0.577855 1_1:+72316693 Msa0041790:CDS
GCAGGTACTACATTTCGAGC+AGG 0.578783 1_1:+72316374 Msa0041790:CDS
TGGAGATGCTAAACCAAACA+TGG 0.581860 1_1:+72316608 Msa0041790:CDS
CAGGTATGTTGCAAGTGAGT+TGG 0.582178 1_1:+72314277 Msa0041790:intron
AGCACTCCAGACATAGCTAA+AGG 0.582825 1_1:+72316423 Msa0041790:CDS
GTCTCATGATGGCCTTTACA+GGG 0.582962 1_1:+72316047 Msa0041790:CDS
TCAGATTCATCTGAGAGTAT+CGG 0.584264 1_1:+72316729 Msa0041790:CDS
TCGATGTGTCTAAAGTTGAC+TGG 0.584614 1_1:+72315299 Msa0041790:CDS
GTAAAGATCTTACGCAAACA+TGG 0.585400 1_1:-72312030 None:intergenic
GGAATATGACACGGATGGTG+CGG 0.585843 1_1:+72316503 Msa0041790:CDS
ATCCCAGAAATTCAATGTTG+TGG 0.586970 1_1:+72311756 Msa0041790:five_prime_UTR
TGAGAACTCTTTGATATGAG+AGG 0.591088 1_1:-72314917 None:intergenic
AAGTTGCCAAATTTCAGCAA+GGG 0.593702 1_1:+72315538 Msa0041790:CDS
TTGGGTCCAACGGTAGCTCA+AGG 0.599883 1_1:+72316463 Msa0041790:CDS
TTGCTATAGATTCAATGCAA+CGG 0.601629 1_1:-72315264 None:intergenic
AAAGTTGCCAAATTTCAGCA+AGG 0.602734 1_1:+72315537 Msa0041790:CDS
ACAACATTGAATTTCTGGGA+TGG 0.605848 1_1:-72311754 None:intergenic
GAAATGTGCCAAAAGACTGG+TGG 0.606762 1_1:+72315395 Msa0041790:CDS
GGATGGTGCGGGGACAGCTG+AGG 0.606898 1_1:+72316515 Msa0041790:CDS
ATTAAGCTATGGGCAAGCAA+AGG 0.609202 1_1:+72316684 Msa0041790:CDS
AAACTTAGCACATATCTCAA+AGG 0.610871 1_1:-72315020 None:intergenic
CTACACCATCCAGAAATAGG+AGG 0.614194 1_1:+72316778 Msa0041790:CDS
AGAAAGGCAGTGTTTCGTGT+AGG 0.616869 1_1:+72315632 Msa0041790:CDS
GTGAGGATGTGTCAAAGCAT+CGG 0.618211 1_1:+72315572 Msa0041790:CDS
CAAGAGGACCTCAAAACTAG+TGG 0.618887 1_1:+72316893 Msa0041790:three_prime_UTR
ACCTGCACAATTACACGTGT+CGG 0.621274 1_1:-72316357 None:intergenic
TATAGTACAGAAAATTGTAA+GGG 0.624280 1_1:+72315813 Msa0041790:CDS
CTGTAAAGGCCATCATGAGA+CGG 0.630996 1_1:-72316045 None:intergenic
AATTGGTCAGCAATTAGAGG+AGG 0.631067 1_1:+72315729 Msa0041790:CDS
TTTCAGGTAAACCAGAAGAA+GGG 0.641130 1_1:-72311951 None:intergenic
GATCCTTCGCGATTTCAGCA+AGG 0.642218 1_1:-72315963 None:intergenic
AACTAATCCGGAATATGACA+CGG 0.643937 1_1:+72316494 Msa0041790:CDS
AGATATTATTGTTAGCATAG+GGG 0.645918 1_1:+72314304 Msa0041790:CDS
TGCATGCAGTGCAAAACGAG+AGG 0.647697 1_1:+72316331 Msa0041790:CDS
AATCCGGAATATGACACGGA+TGG 0.653678 1_1:+72316498 Msa0041790:CDS
GAGCACCCTGGTATCAGCAA+AGG 0.656688 1_1:+72316249 Msa0041790:CDS
TATAACAAATATCAAAACCA+AGG 0.664477 1_1:+72315462 Msa0041790:CDS
AAATGTGCCAAAAGACTGGT+GGG 0.670247 1_1:+72315396 Msa0041790:CDS
ATACCTTGCTGAAATCGCGA+AGG 0.673252 1_1:+72315960 Msa0041790:CDS
CAAGGGTATGATCCCATGTG+AGG 0.680645 1_1:+72315555 Msa0041790:CDS
GAAACACTACAGGAGCACCC+TGG 0.682303 1_1:+72316237 Msa0041790:intron
AATATGACACGGATGGTGCG+GGG 0.682586 1_1:+72316505 Msa0041790:CDS
AGATTAACAAAATCTGACAA+TGG 0.684164 1_1:-72315994 None:intergenic
CAAATTTCAGACATTCCTGG+CGG 0.704589 1_1:+72314989 Msa0041790:CDS
GCTAGTACCCGATGACGCAG+CGG 0.707239 1_1:-72316403 None:intergenic
TTGAAGGGATAAGAAAGCCG+GGG 0.713574 1_1:+72315890 Msa0041790:CDS
GCATCGTTGAGACAAAGCAA+CGG 0.713953 1_1:+72316564 Msa0041790:CDS
GCTTTGACACATCCTCACAT+GGG 0.720284 1_1:-72315567 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTGCTATTAAATTTATT+AGG - chr1_1:72314377-72314396 None:intergenic 10.0%
!!! AAACAATTAGTTTATTTATT+AGG - chr1_1:72314601-72314620 None:intergenic 10.0%
!!! AAGTATATATAGTTTAAAAT+AGG + chr1_1:72316940-72316959 Msa0041790:three_prime_UTR 10.0%
!!! GTTAAAGAAATGTTTTATAA+TGG - chr1_1:72311886-72311905 None:intergenic 15.0%
!! AAATCTAGTAAAATAATGTT+AGG - chr1_1:72312344-72312363 None:intergenic 15.0%
!!! TTAAATACTGAAAAGTATAA+CGG - chr1_1:72313038-72313057 None:intergenic 15.0%
!! TATGCAAATTTCTTTATATT+AGG - chr1_1:72313460-72313479 None:intergenic 15.0%
!!! TTTTAATATTTCTTCACTAT+TGG + chr1_1:72313509-72313528 Msa0041790:intron 15.0%
!!! ATTTTTAGTGATTAAGAAAA+TGG + chr1_1:72313610-72313629 Msa0041790:intron 15.0%
!!! ATTAGGATTTTTTTTTCATT+GGG - chr1_1:72314584-72314603 None:intergenic 15.0%
!!! TATTAGGATTTTTTTTTCAT+TGG - chr1_1:72314585-72314604 None:intergenic 15.0%
!! AAACTACAAATAAAAAGATT+TGG - chr1_1:72314897-72314916 None:intergenic 15.0%
!! ATGTTAAAATTTAAATTCTC+TGG + chr1_1:72316172-72316191 Msa0041790:intron 15.0%
!!! TAATAAAGTTTTAAGCTTTC+AGG - chr1_1:72311970-72311989 None:intergenic 20.0%
!! TAAGATCTTTACTTTCTTAA+TGG + chr1_1:72312041-72312060 Msa0041790:intron 20.0%
!!! TTTTGTTTTTCTCTTAGTAA+TGG + chr1_1:72312083-72312102 Msa0041790:intron 20.0%
!! TTTCATCTCTAAATTTGAAA+AGG + chr1_1:72312109-72312128 Msa0041790:intron 20.0%
!! TTCATCTCTAAATTTGAAAA+GGG + chr1_1:72312110-72312129 Msa0041790:intron 20.0%
!!! TTTTTAAACAATGACTCAAA+TGG + chr1_1:72312153-72312172 Msa0041790:intron 20.0%
!!! TTTTAAACAATGACTCAAAT+GGG + chr1_1:72312154-72312173 Msa0041790:intron 20.0%
!!! TTTTTTATATTGTGATGAGT+TGG + chr1_1:72312189-72312208 Msa0041790:intron 20.0%
!!! TTTTTATATTGTGATGAGTT+GGG + chr1_1:72312190-72312209 Msa0041790:intron 20.0%
!! TAAAGAAATAAAGAAAAGTG+AGG + chr1_1:72312764-72312783 Msa0041790:intron 20.0%
!! TATAAAACATATCCCAAAAA+AGG - chr1_1:72313151-72313170 None:intergenic 20.0%
!! TTTCTTTATATTAGGAACAA+AGG - chr1_1:72313452-72313471 None:intergenic 20.0%
!! GAAATATTAAAAGAAACTGT+TGG - chr1_1:72313501-72313520 None:intergenic 20.0%
!! ACAAAATTAATCTTTCTGAA+AGG + chr1_1:72313679-72313698 Msa0041790:intron 20.0%
!! GTCTAATTGAAAAGTAATAA+TGG - chr1_1:72314069-72314088 None:intergenic 20.0%
!! CAATCTTCTATATTTGAAAA+GGG - chr1_1:72314102-72314121 None:intergenic 20.0%
!!! CTTTTCAAATATAGAAGATT+GGG + chr1_1:72314101-72314120 Msa0041790:intron 20.0%
!! AAAAATACTTGAAATCCAAA+AGG - chr1_1:72314491-72314510 None:intergenic 20.0%
!! TTATCAAAATCTCAACTAAA+TGG + chr1_1:72314701-72314720 Msa0041790:intron 20.0%
!! TATCAAAATCTCAACTAAAT+GGG + chr1_1:72314702-72314721 Msa0041790:intron 20.0%
!!! TTTAAATTGGGTTAGATTTA+TGG + chr1_1:72314745-72314764 Msa0041790:intron 20.0%
!! TATAACAAATATCAAAACCA+AGG + chr1_1:72315462-72315481 Msa0041790:CDS 20.0%
!! ATTCAATCTAATGATGTAAT+TGG + chr1_1:72315487-72315506 Msa0041790:CDS 20.0%
!! TATAGTACAGAAAATTGTAA+GGG + chr1_1:72315813-72315832 Msa0041790:CDS 20.0%
!! TCTCTATACTGAATTTAAAA+TGG - chr1_1:72316126-72316145 None:intergenic 20.0%
! ATTAAAGACACTCATGTATT+AGG + chr1_1:72311799-72311818 Msa0041790:five_prime_UTR 25.0%
! ACAACAACAAAAGAAAAAAG+TGG + chr1_1:72311842-72311861 Msa0041790:intron 25.0%
!!! ACTGTTTTGTTTTTTGTGTA+TGG + chr1_1:72311904-72311923 Msa0041790:five_prime_UTR 25.0%
!!! AAGGGTATGTGTATTTTTTT+AGG + chr1_1:72312128-72312147 Msa0041790:intron 25.0%
! GATCATAACTTTATACTATG+TGG - chr1_1:72312318-72312337 None:intergenic 25.0%
!!! GATTTTTGTTTGTTACATTC+TGG + chr1_1:72312359-72312378 Msa0041790:intron 25.0%
! TTGTTCATTTATTCCATACT+TGG + chr1_1:72312473-72312492 Msa0041790:intron 25.0%
! ATAGATAGATATACACATGT+TGG + chr1_1:72312649-72312668 Msa0041790:intron 25.0%
! AGAACCTTTGCTTAAAAAAT+TGG + chr1_1:72312938-72312957 Msa0041790:intron 25.0%
! GAACCTTTGCTTAAAAAATT+GGG + chr1_1:72312939-72312958 Msa0041790:intron 25.0%
!!! TATCCCAATTTTTTAAGCAA+AGG - chr1_1:72312945-72312964 None:intergenic 25.0%
! AAAAGATAGAGAAAGATAAG+TGG - chr1_1:72312981-72313000 None:intergenic 25.0%
! GAGAAAAGAAAAGTTTCTAA+AGG - chr1_1:72313069-72313088 None:intergenic 25.0%
! AAATGTATATCCAAGTTTCT+TGG - chr1_1:72313100-72313119 None:intergenic 25.0%
!! TTGGGATATGTTTTATATGT+AGG + chr1_1:72313154-72313173 Msa0041790:intron 25.0%
!! TGGGATATGTTTTATATGTA+GGG + chr1_1:72313155-72313174 Msa0041790:intron 25.0%
! AAGATGAAGTTTATGAAACT+TGG + chr1_1:72313270-72313289 Msa0041790:exon 25.0%
! ATAATGCTTGATCTAAATGA+AGG + chr1_1:72313729-72313748 Msa0041790:intron 25.0%
!! GAAGGAAAATTGATAATAGA+AGG - chr1_1:72313870-72313889 None:intergenic 25.0%
!!! AACAGTAATTTAAGCATTGA+AGG - chr1_1:72313888-72313907 None:intergenic 25.0%
! CCAATCTTCTATATTTGAAA+AGG - chr1_1:72314103-72314122 None:intergenic 25.0%
!! CCTTTTCAAATATAGAAGAT+TGG + chr1_1:72314100-72314119 Msa0041790:intron 25.0%
! GAACAAACTATCTAAAAAGA+GGG - chr1_1:72314236-72314255 None:intergenic 25.0%
! AGAACAAACTATCTAAAAAG+AGG - chr1_1:72314237-72314256 None:intergenic 25.0%
! TCAGATATTATTGTTAGCAT+AGG + chr1_1:72314302-72314321 Msa0041790:CDS 25.0%
! CAGATATTATTGTTAGCATA+GGG + chr1_1:72314303-72314322 Msa0041790:CDS 25.0%
! AGATATTATTGTTAGCATAG+GGG + chr1_1:72314304-72314323 Msa0041790:CDS 25.0%
!! TACAAAGTTTTACTTACACA+AGG + chr1_1:72314328-72314347 Msa0041790:CDS 25.0%
! TTAAATTTATTAGGCATGGT+AGG - chr1_1:72314368-72314387 None:intergenic 25.0%
! GCTATTAAATTTATTAGGCA+TGG - chr1_1:72314372-72314391 None:intergenic 25.0%
! ATGTAAATTTCATTCCTTTG+TGG - chr1_1:72314455-72314474 None:intergenic 25.0%
!! ATTTATCATCTTTTGCCTTT+TGG + chr1_1:72314473-72314492 Msa0041790:intron 25.0%
!!! TAGTTGAGATTTTGATAACT+AGG - chr1_1:72314699-72314718 None:intergenic 25.0%
! GATTTATGGAAAATCTAGTT+CGG + chr1_1:72314759-72314778 Msa0041790:intron 25.0%
!! GATGTTTTCTTCATTATTGA+GGG - chr1_1:72314960-72314979 None:intergenic 25.0%
! AAACATCAATCTTGAAAAGA+AGG - chr1_1:72315144-72315163 None:intergenic 25.0%
! ATCATTAGATTGAATTTCCT+TGG - chr1_1:72315482-72315501 None:intergenic 25.0%
!! TTTTTGTAGAATCAGAAGAT+AGG + chr1_1:72315683-72315702 Msa0041790:CDS 25.0%
! GTATAGTACAGAAAATTGTA+AGG + chr1_1:72315812-72315831 Msa0041790:CDS 25.0%
! AAATCTGACAATGGTAAATT+AGG - chr1_1:72315988-72316007 None:intergenic 25.0%
! AGATTAACAAAATCTGACAA+TGG - chr1_1:72315997-72316016 None:intergenic 25.0%
! CTGTTATTGGAAAAATGAAA+GGG + chr1_1:72316637-72316656 Msa0041790:CDS 25.0%
!! TTTAGTTTCTTTATGTCAAG+AGG + chr1_1:72316877-72316896 Msa0041790:three_prime_UTR 25.0%
TACCACAACATTGAATTTCT+GGG - chr1_1:72311761-72311780 None:intergenic 30.0%
TTGGGAAAAAAATTGAGTCT+TGG + chr1_1:72312208-72312227 Msa0041790:intron 30.0%
TGGGAAAAAAATTGAGTCTT+GGG + chr1_1:72312209-72312228 Msa0041790:intron 30.0%
! AGCATATTTTTCTACATGTG+TGG + chr1_1:72312278-72312297 Msa0041790:intron 30.0%
!! TTTTGTTTGTTACATTCTGG+TGG + chr1_1:72312362-72312381 Msa0041790:intron 30.0%
!! ATTCTTGTTGTCTACAGTTT+TGG + chr1_1:72312502-72312521 Msa0041790:intron 30.0%
AGATATACACATGTTGGATT+TGG + chr1_1:72312655-72312674 Msa0041790:intron 30.0%
!! CTTGAAGCTTTTAAAAGTGT+TGG + chr1_1:72312680-72312699 Msa0041790:intron 30.0%
!!! TTTTAAAAGTGTTGGTGGTA+TGG + chr1_1:72312688-72312707 Msa0041790:intron 30.0%
AGAAATAAAGAAAAGTGAGG+TGG + chr1_1:72312767-72312786 Msa0041790:intron 30.0%
TAAGCAAAGGTTCTCTTAAA+TGG - chr1_1:72312932-72312951 None:intergenic 30.0%
AAAGATAAGTGGTCTAGATT+GGG - chr1_1:72312970-72312989 None:intergenic 30.0%
! AAAAGTTTCTAAAGGCAACA+AGG - chr1_1:72313061-72313080 None:intergenic 30.0%
ATATACATTTCAGTGTTAGC+TGG + chr1_1:72313110-72313129 Msa0041790:intron 30.0%
!!! TTGTCTTCTCATTCCTTTTT+TGG + chr1_1:72313135-72313154 Msa0041790:intron 30.0%
!!! TGTCTTCTCATTCCTTTTTT+GGG + chr1_1:72313136-72313155 Msa0041790:intron 30.0%
TATGTAGGGATGTTTGAATT+AGG + chr1_1:72313169-72313188 Msa0041790:intron 30.0%
!!! TTCCTACTAGTTTTGATTTC+CGG + chr1_1:72313554-72313573 Msa0041790:intron 30.0%
! TTTATGCAGTGCAATCTTTT+AGG + chr1_1:72313585-72313604 Msa0041790:intron 30.0%
CAAAAAAAGGAAGACGAAAA+AGG - chr1_1:72313649-72313668 None:intergenic 30.0%
!! CTTTTTCGTCTTCCTTTTTT+TGG + chr1_1:72313647-72313666 Msa0041790:intron 30.0%
ATAGTCATGAAGAACATAGA+AGG - chr1_1:72313711-72313730 None:intergenic 30.0%
AGATTAATGCTGAGAAATGT+AGG + chr1_1:72313758-72313777 Msa0041790:intron 30.0%
GTTGTTAAGTTCTTTCACAT+CGG - chr1_1:72313985-72314004 None:intergenic 30.0%
!! TTCTTTGAAGCTGTCTTTAT+TGG + chr1_1:72314020-72314039 Msa0041790:intron 30.0%
TAGCAATTTGTGCAAAGTTA+CGG + chr1_1:72314388-72314407 Msa0041790:intron 30.0%
! ATTGGGATTTTATCATCACA+TGG - chr1_1:72314567-72314586 None:intergenic 30.0%
CATAATGCATGACCTTATTA+AGG + chr1_1:72314646-72314665 Msa0041790:intron 30.0%
ACCTTATTAAGGATCAGAAA+TGG + chr1_1:72314657-72314676 Msa0041790:intron 30.0%
CATCACTTGAAATTCATTGT+CGG + chr1_1:72314787-72314806 Msa0041790:intron 30.0%
ATCACTTGAAATTCATTGTC+GGG + chr1_1:72314788-72314807 Msa0041790:intron 30.0%
! CGATGTTTTCTTCATTATTG+AGG - chr1_1:72314961-72314980 None:intergenic 30.0%
ATTCAAATTTCAGACATTCC+TGG + chr1_1:72314986-72315005 Msa0041790:CDS 30.0%
AAACTTAGCACATATCTCAA+AGG - chr1_1:72315023-72315042 None:intergenic 30.0%
! ATATGTGCTAAGTTTTGCTA+CGG + chr1_1:72315028-72315047 Msa0041790:CDS 30.0%
!! AATCACATTGTAAGCATTGA+GGG - chr1_1:72315065-72315084 None:intergenic 30.0%
ATGCATGAAAACATTGAGAA+AGG + chr1_1:72315115-72315134 Msa0041790:CDS 30.0%
TTGCTATAGATTCAATGCAA+CGG - chr1_1:72315267-72315286 None:intergenic 30.0%
CATTGAATCTATAGCAAACA+AGG + chr1_1:72315270-72315289 Msa0041790:CDS 30.0%
ATATAACCGAAAAAAGCTTC+CGG + chr1_1:72315330-72315349 Msa0041790:CDS 30.0%
!!! ATTTTGATTAAAGCACCAGA+TGG + chr1_1:72315766-72315785 Msa0041790:CDS 30.0%
GAGATTACAATGTATGATGT+TGG + chr1_1:72315790-72315809 Msa0041790:CDS 30.0%
!! AAAATGCTTTGAAACACTAC+AGG + chr1_1:72316227-72316246 Msa0041790:intron 30.0%
!! GGAATTAAAGGCATTAAGAA+AGG + chr1_1:72316536-72316555 Msa0041790:CDS 30.0%
GCTGTTATTGGAAAAATGAA+AGG + chr1_1:72316636-72316655 Msa0041790:CDS 30.0%
AGAAGTCTTTCATTAAGCTA+TGG + chr1_1:72316673-72316692 Msa0041790:CDS 30.0%
GAAGTCTTTCATTAAGCTAT+GGG + chr1_1:72316674-72316693 Msa0041790:CDS 30.0%
! GTGTAGATTTAACTTCTTCA+GGG - chr1_1:72316764-72316783 None:intergenic 30.0%
AGTTTCCTAAAAGTAGCTAT+TGG + chr1_1:72316806-72316825 Msa0041790:exon 30.0%
!!! ATGAACCAATAGCTACTTTT+AGG - chr1_1:72316814-72316833 None:intergenic 30.0%
! ACAACATTGAATTTCTGGGA+TGG - chr1_1:72311757-72311776 None:intergenic 35.0%
ATCCCAGAAATTCAATGTTG+TGG + chr1_1:72311756-72311775 Msa0041790:five_prime_UTR 35.0%
GTACCACAACATTGAATTTC+TGG - chr1_1:72311762-72311781 None:intergenic 35.0%
!! TTTGTTGTTGTTGCTTGCTA+AGG - chr1_1:72311833-72311852 None:intergenic 35.0%
! TTTCAGGTAAACCAGAAGAA+GGG - chr1_1:72311954-72311973 None:intergenic 35.0%
GTAAAGATCTTACGCAAACA+TGG - chr1_1:72312033-72312052 None:intergenic 35.0%
GAAAAAAATTGAGTCTTGGG+TGG + chr1_1:72312212-72312231 Msa0041790:intron 35.0%
! TTTACACGGAGAGTGATTTT+GGG + chr1_1:72312243-72312262 Msa0041790:intron 35.0%
! CAAGAATCTTTTGCCAAGTA+TGG - chr1_1:72312489-72312508 None:intergenic 35.0%
! TGCAGGTTTTCAAACTTCAA+CGG + chr1_1:72312563-72312582 Msa0041790:intron 35.0%
!!! GAAGCTTTTAAAAGTGTTGG+TGG + chr1_1:72312683-72312702 Msa0041790:intron 35.0%
ACAGTGTAATCAGATAGTGA+AGG + chr1_1:72312740-72312759 Msa0041790:intron 35.0%
GTTTAGTGTTAGTACTCTGT+TGG + chr1_1:72312820-72312839 Msa0041790:intron 35.0%
CTAACAAGAGATTGTTTCCT+TGG - chr1_1:72312900-72312919 None:intergenic 35.0%
GAAAGATAAGTGGTCTAGAT+TGG - chr1_1:72312971-72312990 None:intergenic 35.0%
TCTCTTAAAGCCAAGAAACT+TGG + chr1_1:72313087-72313106 Msa0041790:intron 35.0%
TTGAGTTACCATCTTCTTAG+AGG + chr1_1:72313227-72313246 Msa0041790:five_prime_UTR 35.0%
! TCTACTTTCCTCTAAGAAGA+TGG - chr1_1:72313238-72313257 None:intergenic 35.0%
CAGATACATTTCAGACTGAT+GGG + chr1_1:72313301-72313320 Msa0041790:CDS 35.0%
AACCGGAAATCAAAACTAGT+AGG - chr1_1:72313559-72313578 None:intergenic 35.0%
CACTGCATAAAGTAGAAAAC+CGG - chr1_1:72313576-72313595 None:intergenic 35.0%
!!! TTCGTCTTCCTTTTTTTGGT+TGG + chr1_1:72313651-72313670 Msa0041790:intron 35.0%
AAAAGAGTAGAACCCTAGAA+TGG - chr1_1:72314186-72314205 None:intergenic 35.0%
AATTTATTAGGCATGGTAGG+AGG - chr1_1:72314365-72314384 None:intergenic 35.0%
TTCATTCCTTTGTGGTGTAA+GGG - chr1_1:72314447-72314466 None:intergenic 35.0%
TTTCATTCCTTTGTGGTGTA+AGG - chr1_1:72314448-72314467 None:intergenic 35.0%
GCCATTTCTGATCCTTAATA+AGG - chr1_1:72314661-72314680 None:intergenic 35.0%
ATTAAGGATCAGAAATGGCA+AGG + chr1_1:72314662-72314681 Msa0041790:intron 35.0%
ACGTGCAGTGAGTTTAAATT+GGG + chr1_1:72314733-72314752 Msa0041790:intron 35.0%
! CGACAATGAATTTCAAGTGA+TGG - chr1_1:72314789-72314808 None:intergenic 35.0%
TTGAAATTCATTGTCGGGTT+GGG + chr1_1:72314793-72314812 Msa0041790:intron 35.0%
TGAGAACTCTTTGATATGAG+AGG - chr1_1:72314920-72314939 None:intergenic 35.0%
! CAATCACATTGTAAGCATTG+AGG - chr1_1:72315066-72315085 None:intergenic 35.0%
CTTACAATGTGATTGCTACT+AGG + chr1_1:72315071-72315090 Msa0041790:CDS 35.0%
TACGAAAAATGCTAGAGCTT+AGG - chr1_1:72315168-72315187 None:intergenic 35.0%
! TAGCATTTTTCGTAGTTGGA+AGG + chr1_1:72315174-72315193 Msa0041790:CDS 35.0%
TACAAAGTCTTTGTCACCAT+TGG + chr1_1:72315219-72315238 Msa0041790:CDS 35.0%
!!! TTTCTTCCGGAAGCTTTTTT+CGG - chr1_1:72315339-72315358 None:intergenic 35.0%
AAAAAGCTTCCGGAAGAAAA+TGG + chr1_1:72315340-72315359 Msa0041790:CDS 35.0%
TCTGTAAGCATAAGCTTTCA+AGG - chr1_1:72315518-72315537 None:intergenic 35.0%
AAAGTTGCCAAATTTCAGCA+AGG + chr1_1:72315537-72315556 Msa0041790:CDS 35.0%
AAGTTGCCAAATTTCAGCAA+GGG + chr1_1:72315538-72315557 Msa0041790:CDS 35.0%
ATCATACCCTTGCTGAAATT+TGG - chr1_1:72315547-72315566 None:intergenic 35.0%
GATGTGCTAGTAAAGAGAAT+TGG + chr1_1:72315712-72315731 Msa0041790:CDS 35.0%
TACATTGTAATCTCTCCATC+TGG - chr1_1:72315784-72315803 None:intergenic 35.0%
TCACAATTCCGAGATTGAAT+TGG + chr1_1:72315852-72315871 Msa0041790:CDS 35.0%
AATTCCGAGATTGAATTGGT+TGG + chr1_1:72315856-72315875 Msa0041790:CDS 35.0%
GGCTATTGACACATATTTGA+AGG + chr1_1:72316068-72316087 Msa0041790:CDS 35.0%
TTGATTCCTTTAGCTATGTC+TGG - chr1_1:72316432-72316451 None:intergenic 35.0%
AACTAATCCGGAATATGACA+CGG + chr1_1:72316494-72316513 Msa0041790:CDS 35.0%
GTTGGAAACAGTTTCAAAGA+TGG + chr1_1:72316588-72316607 Msa0041790:CDS 35.0%
TGCTAAACCAAACATGGATA+AGG + chr1_1:72316614-72316633 Msa0041790:CDS 35.0%
! ATAACAGCCTTATCCATGTT+TGG - chr1_1:72316624-72316643 None:intergenic 35.0%
AACATGGATAAGGCTGTTAT+TGG + chr1_1:72316624-72316643 Msa0041790:CDS 35.0%
! TCAGATTCATCTGAGAGTAT+CGG + chr1_1:72316729-72316748 Msa0041790:CDS 35.0%
! GGTGTAGATTTAACTTCTTC+AGG - chr1_1:72316765-72316784 None:intergenic 35.0%
AATCTACACCATCCAGAAAT+AGG + chr1_1:72316775-72316794 Msa0041790:CDS 35.0%
AACTGAATTCCTCCTATTTC+TGG - chr1_1:72316790-72316809 None:intergenic 35.0%
!!! GAGATAAACCACTAGTTTTG+AGG - chr1_1:72316904-72316923 None:intergenic 35.0%
! CTTTCAGGTAAACCAGAAGA+AGG - chr1_1:72311955-72311974 None:intergenic 40.0%
AATTGAGTCTTGGGTGGTAT+TGG + chr1_1:72312218-72312237 Msa0041790:intron 40.0%
! GTTTACACGGAGAGTGATTT+TGG + chr1_1:72312242-72312261 Msa0041790:intron 40.0%
!! CTTGTTGTCTACAGTTTTGG+TGG + chr1_1:72312505-72312524 Msa0041790:intron 40.0%
TGCAACTGAAAACAGCATCT+TGG - chr1_1:72312547-72312566 None:intergenic 40.0%
!!! AAGATGCTGTTTTCAGTTGC+AGG + chr1_1:72312546-72312565 Msa0041790:intron 40.0%
CAAGAGATTGTTTCCTTGGT+CGG - chr1_1:72312896-72312915 None:intergenic 40.0%
! AGTCTGAAATGTATCTGGCT+TGG - chr1_1:72313298-72313317 None:intergenic 40.0%
! CCATCAGTCTGAAATGTATC+TGG - chr1_1:72313303-72313322 None:intergenic 40.0%
CCAGATACATTTCAGACTGA+TGG + chr1_1:72313300-72313319 Msa0041790:CDS 40.0%
CTGATGGGAACAACAATGTT+AGG + chr1_1:72313316-72313335 Msa0041790:CDS 40.0%
TGTCATCGCCAACCAAAAAA+AGG - chr1_1:72313662-72313681 None:intergenic 40.0%
TTATTGTTGCTGACCTGACT+AGG + chr1_1:72313801-72313820 Msa0041790:intron 40.0%
TGAATGTTCAAGTCCTAGTC+AGG - chr1_1:72313817-72313836 None:intergenic 40.0%
TTGATCTAGCCACCATTCTA+GGG + chr1_1:72314171-72314190 Msa0041790:intron 40.0%
TCATTTCCCTTACACCACAA+AGG + chr1_1:72314438-72314457 Msa0041790:intron 40.0%
CACGTGCAGTGAGTTTAAAT+TGG + chr1_1:72314732-72314751 Msa0041790:intron 40.0%
CTTGAAATTCATTGTCGGGT+TGG + chr1_1:72314792-72314811 Msa0041790:intron 40.0%
CAAATTTCAGACATTCCTGG+CGG + chr1_1:72314989-72315008 Msa0041790:CDS 40.0%
! GCTCTAGCATTTTTCGTAGT+TGG + chr1_1:72315170-72315189 Msa0041790:CDS 40.0%
! TCGATGTGTCTAAAGTTGAC+TGG + chr1_1:72315299-72315318 Msa0041790:CDS 40.0%
!! GACTCAAAGCCATTTTCTTC+CGG - chr1_1:72315352-72315371 None:intergenic 40.0%
! AGTTCTAACTCCATTCTGGT+TGG - chr1_1:72315374-72315393 None:intergenic 40.0%
! TTCGAGTTCTAACTCCATTC+TGG - chr1_1:72315378-72315397 None:intergenic 40.0%
AAATGTGCCAAAAGACTGGT+GGG + chr1_1:72315396-72315415 Msa0041790:CDS 40.0%
GAGAATTGGTCAGCAATTAG+AGG + chr1_1:72315726-72315745 Msa0041790:CDS 40.0%
AATTGGTCAGCAATTAGAGG+AGG + chr1_1:72315729-72315748 Msa0041790:CDS 40.0%
ACCTCCAACCAATTCAATCT+CGG - chr1_1:72315863-72315882 None:intergenic 40.0%
ACTTGAAGGGATAAGAAAGC+CGG + chr1_1:72315888-72315907 Msa0041790:CDS 40.0%
! TTTTGCAACCATCAGCTTAG+AGG - chr1_1:72315929-72315948 None:intergenic 40.0%
ATGTGTCAATAGCCCTGTAA+AGG - chr1_1:72316062-72316081 None:intergenic 40.0%
TTTCACCTTTGCTGATACCA+GGG - chr1_1:72316257-72316276 None:intergenic 40.0%
! TTTTCACCTTTGCTGATACC+AGG - chr1_1:72316258-72316277 None:intergenic 40.0%
! GAAGAGTATATGCCAGCTAA+TGG + chr1_1:72316278-72316297 Msa0041790:CDS 40.0%
GAATCAAAGACCTGAGCATT+GGG + chr1_1:72316445-72316464 Msa0041790:CDS 40.0%
TGGAGATGCTAAACCAAACA+TGG + chr1_1:72316608-72316627 Msa0041790:CDS 40.0%
ATTAAGCTATGGGCAAGCAA+AGG + chr1_1:72316684-72316703 Msa0041790:CDS 40.0%
!! GAATTCCTCCTATTTCTGGA+TGG - chr1_1:72316786-72316805 None:intergenic 40.0%
TTCTCTCTTCACCCTTCTTC+TGG + chr1_1:72311940-72311959 Msa0041790:five_prime_UTR 45.0%
!! GGGTGGTATTGGTGTTTACA+CGG + chr1_1:72312229-72312248 Msa0041790:intron 45.0%
TGGAGTCAGAATTGTGTCTC+TGG + chr1_1:72312787-72312806 Msa0041790:intron 45.0%
CTATGTTCCCTGAGCTGATT+CGG + chr1_1:72312843-72312862 Msa0041790:intron 45.0%
TTGACAGCAAACAAGGCAGA+AGG - chr1_1:72313011-72313030 None:intergenic 45.0%
CGGAATCTTGACAGCAAACA+AGG - chr1_1:72313018-72313037 None:intergenic 45.0%
CTTGATCTAGCCACCATTCT+AGG + chr1_1:72314170-72314189 Msa0041790:intron 45.0%
AGAGTAGAACCCTAGAATGG+TGG - chr1_1:72314183-72314202 None:intergenic 45.0%
ACAAGATGCCTTTCATGCAC+AGG + chr1_1:72314258-72314277 Msa0041790:intron 45.0%
GCAACATACCTGTGCATGAA+AGG - chr1_1:72314269-72314288 None:intergenic 45.0%
CAGGTATGTTGCAAGTGAGT+TGG + chr1_1:72314277-72314296 Msa0041790:intron 45.0%
! TGGCTTTTCAGCACAGGTTA+AGG - chr1_1:72314547-72314566 None:intergenic 45.0%
! ATCACATGGCTTTTCAGCAC+AGG - chr1_1:72314553-72314572 None:intergenic 45.0%
GTCTTTGTCACCATTGGATG+AGG + chr1_1:72315225-72315244 Msa0041790:CDS 45.0%
ACCATTGGATGAGGAGCAAA+AGG + chr1_1:72315234-72315253 Msa0041790:CDS 45.0%
! ACCTTTTGCTCCTCATCCAA+TGG - chr1_1:72315238-72315257 None:intergenic 45.0%
CTCGAAATGTGCCAAAAGAC+TGG + chr1_1:72315392-72315411 Msa0041790:CDS 45.0%
GAAATGTGCCAAAAGACTGG+TGG + chr1_1:72315395-72315414 Msa0041790:CDS 45.0%
! TCTTCAACCCACCAGTCTTT+TGG - chr1_1:72315406-72315425 None:intergenic 45.0%
GCTTTGACACATCCTCACAT+GGG - chr1_1:72315570-72315589 None:intergenic 45.0%
TGCTTTGACACATCCTCACA+TGG - chr1_1:72315571-72315590 None:intergenic 45.0%
GTGAGGATGTGTCAAAGCAT+CGG + chr1_1:72315572-72315591 Msa0041790:CDS 45.0%
AAGTTGTTGCCTTCCGAGAA+AGG + chr1_1:72315616-72315635 Msa0041790:CDS 45.0%
ACACGAAACACTGCCTTTCT+CGG - chr1_1:72315632-72315651 None:intergenic 45.0%
AGAAAGGCAGTGTTTCGTGT+AGG + chr1_1:72315632-72315651 Msa0041790:CDS 45.0%
CAGTGTTTCGTGTAGGTTCT+TGG + chr1_1:72315639-72315658 Msa0041790:CDS 45.0%
TCCGAGATTGAATTGGTTGG+AGG + chr1_1:72315859-72315878 Msa0041790:CDS 45.0%
GAGATTGAATTGGTTGGAGG+TGG + chr1_1:72315862-72315881 Msa0041790:CDS 45.0%
CTTGAAGGGATAAGAAAGCC+GGG + chr1_1:72315889-72315908 Msa0041790:CDS 45.0%
TTGAAGGGATAAGAAAGCCG+GGG + chr1_1:72315890-72315909 Msa0041790:CDS 45.0%
! GAGGCATCTGATAAAATCCC+CGG - chr1_1:72315910-72315929 None:intergenic 45.0%
ATCAGATGCCTCTAAGCTGA+TGG + chr1_1:72315918-72315937 Msa0041790:CDS 45.0%
ATACCTTGCTGAAATCGCGA+AGG + chr1_1:72315960-72315979 Msa0041790:CDS 45.0%
CTGTAAAGGCCATCATGAGA+CGG - chr1_1:72316048-72316067 None:intergenic 45.0%
GTCTCATGATGGCCTTTACA+GGG + chr1_1:72316047-72316066 Msa0041790:CDS 45.0%
GCTTTCTGCAATCCATTAGC+TGG - chr1_1:72316293-72316312 None:intergenic 45.0%
ACCTGCACAATTACACGTGT+CGG - chr1_1:72316360-72316379 None:intergenic 45.0%
AGCACTCCAGACATAGCTAA+AGG + chr1_1:72316423-72316442 Msa0041790:CDS 45.0%
GGAATCAAAGACCTGAGCAT+TGG + chr1_1:72316444-72316463 Msa0041790:CDS 45.0%
AAGGTCGGGAACAACTAATC+CGG + chr1_1:72316482-72316501 Msa0041790:CDS 45.0%
AATCCGGAATATGACACGGA+TGG + chr1_1:72316498-72316517 Msa0041790:CDS 45.0%
GCATCGTTGAGACAAAGCAA+CGG + chr1_1:72316564-72316583 Msa0041790:CDS 45.0%
TTGAGACAAAGCAACGGAGT+TGG + chr1_1:72316570-72316589 Msa0041790:CDS 45.0%
GGAGGACATGGAGAAAATAG+TGG + chr1_1:72316705-72316724 Msa0041790:CDS 45.0%
CTACACCATCCAGAAATAGG+AGG + chr1_1:72316778-72316797 Msa0041790:CDS 45.0%
CAAGAGGACCTCAAAACTAG+TGG + chr1_1:72316893-72316912 Msa0041790:three_prime_UTR 45.0%
!! CGGAGAGTGATTTTGGGTAG+TGG + chr1_1:72312249-72312268 Msa0041790:intron 50.0%
GAGATTGTTTCCTTGGTCGG+CGG - chr1_1:72312893-72312912 None:intergenic 50.0%
! AGGTGTGCAGCAGAGTATCT+TGG + chr1_1:72315091-72315110 Msa0041790:CDS 50.0%
!! GGCTTTGAGTCCAACCAGAA+TGG + chr1_1:72315361-72315380 Msa0041790:CDS 50.0%
! CAAGGGTATGATCCCATGTG+AGG + chr1_1:72315555-72315574 Msa0041790:CDS 50.0%
GAAACACTGCCTTTCTCGGA+AGG - chr1_1:72315628-72315647 None:intergenic 50.0%
TTGGAGGTGGCGAACTTGAA+GGG + chr1_1:72315875-72315894 Msa0041790:CDS 50.0%
GATCCTTCGCGATTTCAGCA+AGG - chr1_1:72315966-72315985 None:intergenic 50.0%
ATCTCTCGTCCGTCTCATGA+TGG + chr1_1:72316036-72316055 Msa0041790:CDS 50.0%
CGTCTCATGATGGCCTTTAC+AGG + chr1_1:72316046-72316065 Msa0041790:CDS 50.0%
! CTCGTTTTGCACTGCATGCA+AGG - chr1_1:72316331-72316350 None:intergenic 50.0%
TGCATGCAGTGCAAAACGAG+AGG + chr1_1:72316331-72316350 Msa0041790:CDS 50.0%
ACCGACACGTGTAATTGTGC+AGG + chr1_1:72316356-72316375 Msa0041790:CDS 50.0%
GCAGGTACTACATTTCGAGC+AGG + chr1_1:72316374-72316393 Msa0041790:CDS 50.0%
GCACCATCCGTGTCATATTC+CGG - chr1_1:72316504-72316523 None:intergenic 50.0%
GGAATATGACACGGATGGTG+CGG + chr1_1:72316503-72316522 Msa0041790:CDS 50.0%
GAATATGACACGGATGGTGC+GGG + chr1_1:72316504-72316523 Msa0041790:CDS 50.0%
AATATGACACGGATGGTGCG+GGG + chr1_1:72316505-72316524 Msa0041790:CDS 50.0%
GGGGACAGCTGAGGAATTAA+AGG + chr1_1:72316524-72316543 Msa0041790:CDS 50.0%
AAGCTATGGGCAAGCAAAGG+AGG + chr1_1:72316687-72316706 Msa0041790:CDS 50.0%
GTTGGAGGTGGCGAACTTGA+AGG + chr1_1:72315874-72315893 Msa0041790:CDS 55.0%
!! GAAACACTACAGGAGCACCC+TGG + chr1_1:72316237-72316256 Msa0041790:intron 55.0%
GAGCACCCTGGTATCAGCAA+AGG + chr1_1:72316249-72316268 Msa0041790:CDS 55.0%
!! GACCTGAGCATTGGGTCCAA+CGG + chr1_1:72316453-72316472 Msa0041790:CDS 55.0%
TACCGTTGGACCCAATGCTC+AGG - chr1_1:72316458-72316477 None:intergenic 55.0%
TTGGGTCCAACGGTAGCTCA+AGG + chr1_1:72316463-72316482 Msa0041790:CDS 55.0%
GTCCAACGGTAGCTCAAGGT+CGG + chr1_1:72316467-72316486 Msa0041790:CDS 55.0%
TCCAACGGTAGCTCAAGGTC+GGG + chr1_1:72316468-72316487 Msa0041790:CDS 55.0%
TGGGCAAGCAAAGGAGGACA+TGG + chr1_1:72316693-72316712 Msa0041790:CDS 55.0%
GTTTCCTTGGTCGGCGGCAA+AGG - chr1_1:72312887-72312906 None:intergenic 60.0%
!! TCAAAGGCACTTGCACCGCC+AGG - chr1_1:72315007-72315026 None:intergenic 60.0%
GGTCAGAACCGCTGCGTCAT+CGG + chr1_1:72316395-72316414 Msa0041790:CDS 60.0%
GTCAGAACCGCTGCGTCATC+GGG + chr1_1:72316396-72316415 Msa0041790:CDS 60.0%
GCTAGTACCCGATGACGCAG+CGG - chr1_1:72316406-72316425 None:intergenic 60.0%
TCCCGACCTTGAGCTACCGT+TGG - chr1_1:72316472-72316491 None:intergenic 60.0%
GGGCGCACCGAATCAGCTCA+GGG - chr1_1:72312853-72312872 None:intergenic 65.0%
!! CTGAGCTGATTCGGTGCGCC+CGG + chr1_1:72312852-72312871 Msa0041790:intron 65.0%
TTGGTCGGCGGCAAAGGCCA+CGG - chr1_1:72312881-72312900 None:intergenic 65.0%
CGGGCGCACCGAATCAGCTC+AGG - chr1_1:72312854-72312873 None:intergenic 70.0%
CGGCAAAGGCCACGGAGTCC+GGG - chr1_1:72312873-72312892 None:intergenic 70.0%
GCGGCAAAGGCCACGGAGTC+CGG - chr1_1:72312874-72312893 None:intergenic 70.0%
GTGGCCTTTGCCGCCGACCA+AGG + chr1_1:72312880-72312899 Msa0041790:intron 70.0%
GGATGGTGCGGGGACAGCTG+AGG + chr1_1:72316515-72316534 Msa0041790:CDS 70.0%
! TTCGGTGCGCCCGGACTCCG+TGG + chr1_1:72312861-72312880 Msa0041790:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 72311712 72317001 72311712 ID=Msa0041790;Name=Msa0041790
chr1_1 mRNA 72311712 72317001 72311712 ID=Msa0041790-mRNA-1;Parent=Msa0041790;Name=Msa0041790-mRNA-1;_AED=0.05;_eAED=0.05;_QI=396|1|0.83|1|0.6|0.5|6|186|625
chr1_1 exon 72311712 72311853 72311712 ID=Msa0041790-mRNA-1:exon:24056;Parent=Msa0041790-mRNA-1
chr1_1 exon 72311883 72312039 72311883 ID=Msa0041790-mRNA-1:exon:24057;Parent=Msa0041790-mRNA-1
chr1_1 exon 72313176 72313337 72313176 ID=Msa0041790-mRNA-1:exon:24058;Parent=Msa0041790-mRNA-1
chr1_1 exon 72314280 72314349 72314280 ID=Msa0041790-mRNA-1:exon:24059;Parent=Msa0041790-mRNA-1
chr1_1 exon 72314914 72316089 72314914 ID=Msa0041790-mRNA-1:exon:24060;Parent=Msa0041790-mRNA-1
chr1_1 exon 72316249 72317001 72316249 ID=Msa0041790-mRNA-1:exon:24061;Parent=Msa0041790-mRNA-1
chr1_1 five_prime_UTR 72311712 72311853 72311712 ID=Msa0041790-mRNA-1:five_prime_utr;Parent=Msa0041790-mRNA-1
chr1_1 five_prime_UTR 72311883 72312039 72311883 ID=Msa0041790-mRNA-1:five_prime_utr;Parent=Msa0041790-mRNA-1
chr1_1 five_prime_UTR 72313176 72313272 72313176 ID=Msa0041790-mRNA-1:five_prime_utr;Parent=Msa0041790-mRNA-1
chr1_1 CDS 72313273 72313337 72313273 ID=Msa0041790-mRNA-1:cds;Parent=Msa0041790-mRNA-1
chr1_1 CDS 72314280 72314349 72314280 ID=Msa0041790-mRNA-1:cds;Parent=Msa0041790-mRNA-1
chr1_1 CDS 72314914 72316089 72314914 ID=Msa0041790-mRNA-1:cds;Parent=Msa0041790-mRNA-1
chr1_1 CDS 72316249 72316815 72316249 ID=Msa0041790-mRNA-1:cds;Parent=Msa0041790-mRNA-1
chr1_1 three_prime_UTR 72316816 72317001 72316816 ID=Msa0041790-mRNA-1:three_prime_utr;Parent=Msa0041790-mRNA-1
Gene Sequence

>Msa0041790

ATGAAGTTTATGAAACTTGGTTCCAAGCCAGATACATTTCAGACTGATGGGAACAACAATGTTAGGTATGTTGCAAGTGAGTTGGCATCAGATATTATTGTTAGCATAGGGGATACAAAGTTTTACTTACACAAGTTTCCTCTCATATCAAAGAGTTCTCACTTACAGAAGTTGATCTCCCTCAATAATGAAGAAAACATCGACGAAATTCAAATTTCAGACATTCCTGGCGGTGCAAGTGCCTTTGAGATATGTGCTAAGTTTTGCTACGGCATGACTGTTACCCTCAATGCTTACAATGTGATTGCTACTAGGTGTGCAGCAGAGTATCTTGGAATGCATGAAAACATTGAGAAAGGAAACCTTCTTTTCAAGATTGATGTTTTCCTAAGCTCTAGCATTTTTCGTAGTTGGAAGGATTCCATTATCCTTCTTCAGACTACAAAGTCTTTGTCACCATTGGATGAGGAGCAAAAGGTTGTCAACCGTTGCATTGAATCTATAGCAAACAAGGCATGCGTCGATGTGTCTAAAGTTGACTGGTCTTACACATATAACCGAAAAAAGCTTCCGGAAGAAAATGGCTTTGAGTCCAACCAGAATGGAGTTAGAACTCGAAATGTGCCAAAAGACTGGTGGGTTGAAGATTTATGCGAACTTGAAGTTGACATGTACAAATCTGTTATAACAAATATCAAAACCAAGGAAATTCAATCTAATGATGTAATTGGTGAAGCCTTGAAAGCTTATGCTTACAGAAAGTTGCCAAATTTCAGCAAGGGTATGATCCCATGTGAGGATGTGTCAAAGCATCGGTTAATAGTTGAAACTATTGTGAAGTTGTTGCCTTCCGAGAAAGGCAGTGTTTCGTGTAGGTTCTTGGTCAAGTTATTGAAAGCTGCGATTTTTGTAGAATCAGAAGATAGGATCAGAGATGTGCTAGTAAAGAGAATTGGTCAGCAATTAGAGGAGGCTTCAGTAAACGATATTTTGATTAAAGCACCAGATGGAGAGATTACAATGTATGATGTTGGTATAGTACAGAAAATTGTAAGGGAGTTTCTTATGAAAGATCACAATTCCGAGATTGAATTGGTTGGAGGTGGCGAACTTGAAGGGATAAGAAAGCCGGGGATTTTATCAGATGCCTCTAAGCTGATGGTTGCAAAACTCATAGATGAATACCTTGCTGAAATCGCGAAGGATCCTAATTTACCATTGTCAGATTTTGTTAATCTTGCTGAGTTAGTTTCTAGCATCTCTCGTCCGTCTCATGATGGCCTTTACAGGGCTATTGACACATATTTGAAGGAGCACCCTGGTATCAGCAAAGGTGAAAAGAAGAGTATATGCCAGCTAATGGATTGCAGAAAGCTATCAGTTGATGCATCCTTGCATGCAGTGCAAAACGAGAGGCTACCGACACGTGTAATTGTGCAGGTACTACATTTCGAGCAGGTCAGAACCGCTGCGTCATCGGGTACTAGCACTCCAGACATAGCTAAAGGAATCAAAGACCTGAGCATTGGGTCCAACGGTAGCTCAAGGTCGGGAACAACTAATCCGGAATATGACACGGATGGTGCGGGGACAGCTGAGGAATTAAAGGCATTAAGAAAGGAACTTGCATCGTTGAGACAAAGCAACGGAGTTGGAAACAGTTTCAAAGATGGAGATGCTAAACCAAACATGGATAAGGCTGTTATTGGAAAAATGAAAGGGTTGTTGAAGTCAAAGAAGTCTTTCATTAAGCTATGGGCAAGCAAAGGAGGACATGGAGAAAATAGTGGCTCAGATTCATCTGAGAGTATCGGCTCTGTTAACCCTGAAGAAGTTAAATCTACACCATCCAGAAATAGGAGGAATTCAGTTTCCTAA
Protein sequence

>Msa0041790

MKFMKLGSKPDTFQTDGNNNVRYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENIDEIQISDIPGGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDSIILLQTTKSLSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQNGVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPNFSKGMIPCEDVSKHRLIVETIVKLLPSEKGSVSCRFLVKLLKAAIFVESEDRIRDVLVKRIGQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRKPGILSDASKLMVAKLIDEYLAEIAKDPNLPLSDFVNLAELVSSISRPSHDGLYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVGNSFKDGDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNPEEVKSTPSRNRRNSVS*