AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1393560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1393560 MtrunA17_Chr8g0388451 98.204 891 16 0 38 928 1 891 0.0 1823
Msa1393560 MtrunA17_Chr3g0102561 87.805 82 7 3 202 282 17 96 2.09e-33 124
Msa1393560 MtrunA17_Chr3g0104521 30.855 269 166 7 530 791 80 335 4.14e-27 116
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1393560 AT4G14700.1 66.362 767 214 10 167 927 81 809 0.0 1005
Msa1393560 AT4G12620.1 70.774 698 185 6 234 927 131 813 0.0 994
Msa1393560 AT1G07270.1 25.750 400 280 11 526 918 109 498 9.05e-31 128
Msa1393560 AT1G07270.2 28.616 318 211 10 526 836 109 417 1.53e-30 127
Msa1393560 AT2G29680.2 24.877 406 276 12 526 918 112 501 3.01e-27 117

Find 242 sgRNAs with CRISPR-Local

Find 591 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGATGAATCTGGCGATTT+TGG 0.133439 tig0021743:+66426 None:intergenic
CCATTCTTACATTAGATATT+TGG 0.155630 tig0021743:+58472 None:intergenic
GTTAGTTACCGACTGGTTTC+TGG 0.202474 tig0021743:+62881 None:intergenic
TGAAGCTGCTGATAATTATA+TGG 0.208304 tig0021743:+62463 None:intergenic
CTGCACAAGGGACGGTTCTT+TGG 0.215974 tig0021743:-63695 Msa1393560:CDS
AGAAGCTCCAATGGAGAAAT+TGG 0.221785 tig0021743:+66865 None:intergenic
CGCCCAACAGAAGTCTCTTC+TGG 0.247491 tig0021743:+65670 None:intergenic
CTCTATATTCACGGTGTTCC+GGG 0.266627 tig0021743:-63390 Msa1393560:CDS
CCTCTATATTCACGGTGTTC+CGG 0.288739 tig0021743:-63391 Msa1393560:CDS
GTCATATATGAAGCATTAAA+TGG 0.289669 tig0021743:-63029 Msa1393560:CDS
CTTCAGGTTGCAGCTATATC+AGG 0.290038 tig0021743:-62259 Msa1393560:intron
TTTACAGATTTCGATGAATC+TGG 0.295754 tig0021743:+66417 None:intergenic
AACCTACATTCCTCCACTTC+TGG 0.299054 tig0021743:+66099 None:intergenic
CCGATTCTTCTCCCTCTTCT+CGG 0.303926 tig0021743:+66609 None:intergenic
GAAGCCATTGGAACGAGATT+TGG 0.307436 tig0021743:+66798 None:intergenic
CTAGCTTTGGCATACTCCTT+AGG 0.308499 tig0021743:+64209 None:intergenic
ATCTCCCTCATTGCTAGCTT+TGG 0.313313 tig0021743:+64196 None:intergenic
TTCTTACCCTTCGGCGGCTT+TGG 0.317699 tig0021743:+65919 None:intergenic
GGAGATCAATGGTCTGAAAT+TGG 0.328776 tig0021743:-63162 Msa1393560:CDS
GGGAGATTGAAGAAGCTTCT+TGG 0.333604 tig0021743:+66770 None:intergenic
AAAGAATTCCAGAGCATATA+AGG 0.339598 tig0021743:-63652 Msa1393560:CDS
ATACCTGCAGCAACATTATC+AGG 0.340644 tig0021743:+62157 None:intergenic
TTTGTAGAAGGGAAGAAAAC+TGG 0.345764 tig0021743:-62960 Msa1393560:CDS
CTAAATGAGAGGTTTGTAGA+AGG 0.346073 tig0021743:-62972 Msa1393560:CDS
CTATGTATTACACATGTATT+AGG 0.346172 tig0021743:-58305 Msa1393560:three_prime_UTR
ATTGAGTGTGATAGTTGTTT+AGG 0.355173 tig0021743:-66048 Msa1393560:CDS
ATCTGTTGTATGTTGGTCCT+TGG 0.363333 tig0021743:-58337 Msa1393560:three_prime_UTR
TGAGATTCGGCAACGAGATT+GGG 0.367135 tig0021743:+66648 None:intergenic
TTGATCTCCACGAAACAGTA+TGG 0.382365 tig0021743:+63176 None:intergenic
CCACATATCCAATCCCCTTC+AGG 0.385042 tig0021743:+65982 None:intergenic
GCTGAATTGAAGAAGAGAAA+TGG 0.386079 tig0021743:-66366 Msa1393560:CDS
TAGCTTTGGCATACTCCTTA+GGG 0.393164 tig0021743:+64210 None:intergenic
TTGAGATTCGGCAACGAGAT+TGG 0.395152 tig0021743:+66647 None:intergenic
TATTTCTGACAATCAATGTC+TGG 0.396034 tig0021743:-63421 Msa1393560:CDS
TTTCAACTAACTTGAATATG+AGG 0.396989 tig0021743:+60783 None:intergenic
ATAAGTCTTACCCAACTTGC+AGG 0.400447 tig0021743:+59730 None:intergenic
AGAGTGACGGTGACGAAGAC+TGG 0.402154 tig0021743:-63918 Msa1393560:CDS
AGGAGATGCACGCCGTGCTT+TGG 0.412726 tig0021743:-62239 Msa1393560:CDS
GGAGATTGAAGAAGCTTCTT+GGG 0.412877 tig0021743:+66771 None:intergenic
CTAACAAGCTTCTTACCCTT+CGG 0.416592 tig0021743:+65910 None:intergenic
GCTATATCGGACCAACGATT+TGG 0.417826 tig0021743:-65623 Msa1393560:CDS
TACATAATTGTTACCATCTC+CGG 0.421160 tig0021743:-58385 Msa1393560:three_prime_UTR
GAAGCTCCAATGGAGAAATT+GGG 0.421607 tig0021743:+66866 None:intergenic
TGAGAATTGTGAACGGAGGT+TGG 0.424141 tig0021743:+66737 None:intergenic
AGCTGCGAGCTAGGGTTTGA+TGG 0.426652 tig0021743:+66831 None:intergenic
GAAATTGGGGATGAGTATAT+AGG 0.427197 tig0021743:+66880 None:intergenic
AAAACGGTTGTTACAAGAGC+TGG 0.428477 tig0021743:-66249 Msa1393560:CDS
GAAGCTGCTGATAATTATAT+GGG 0.430667 tig0021743:+62464 None:intergenic
TTTGCGTGGAGCTGCGAGCT+AGG 0.431875 tig0021743:+66822 None:intergenic
ATTTGAGCAGAGAGCTATAT+CGG 0.433378 tig0021743:-65636 Msa1393560:CDS
TTCTTTGGACTTCAGAAGAT+AGG 0.436400 tig0021743:-63680 Msa1393560:CDS
ATGATATCCTCCTGCAAGTT+GGG 0.437262 tig0021743:-59740 Msa1393560:intron
CTCATCCCCAATTTCTCCAT+TGG 0.438681 tig0021743:-66872 Msa1393560:CDS
AGCAATGGTGAAGTGTTTCC+TGG 0.439086 tig0021743:-59765 Msa1393560:CDS
GAGCTTTACAAAACAGGAAT+GGG 0.441059 tig0021743:-60211 Msa1393560:CDS
CCAAATATCTAATGTAAGAA+TGG 0.441327 tig0021743:-58472 Msa1393560:exon
CGGAGCGAACGAAACCTTAA+GGG 0.442571 tig0021743:+66332 None:intergenic
TCCGACGTCGCCGGATCAAT+CGG 0.442884 tig0021743:-66313 Msa1393560:CDS
GACGGCGGTGAATTTGAAGT+TGG 0.443655 tig0021743:-66174 Msa1393560:CDS
GGGCGTTGCCTCTATATTCA+CGG 0.455755 tig0021743:-63399 Msa1393560:CDS
CATTCCAAGCTAATTGTGAT+AGG 0.457837 tig0021743:-62735 Msa1393560:intron
ATCATTTCGAGTCGCCTCAA+TGG 0.464299 tig0021743:-62436 Msa1393560:CDS
ACGGCGGTGAATTTGAAGTT+GGG 0.465132 tig0021743:-66173 Msa1393560:CDS
CTTACCTATCACAATTAGCT+TGG 0.465486 tig0021743:+62731 None:intergenic
AAGATGTTCCTGAAGGGGAT+TGG 0.466368 tig0021743:-65990 Msa1393560:CDS
TCTGTTGTATGTTGGTCCTT+GGG 0.468732 tig0021743:-58336 Msa1393560:three_prime_UTR
GTGCACGAGCTTTACAAAAC+AGG 0.469313 tig0021743:-60217 Msa1393560:CDS
TGATTGTTGAATTTGAGATT+CGG 0.470559 tig0021743:+66635 None:intergenic
CATCAAACCATACTGTTTCG+TGG 0.472974 tig0021743:-63183 Msa1393560:CDS
TCGGAGCGAACGAAACCTTA+AGG 0.473564 tig0021743:+66331 None:intergenic
TTTCTACAAGGTAAAGACTT+AGG 0.474900 tig0021743:+63572 None:intergenic
TTGTGAGACCTTATATGCTC+TGG 0.474919 tig0021743:+63644 None:intergenic
TTCTTAGTTTCCGATTGATC+CGG 0.476110 tig0021743:+66303 None:intergenic
GCCCAACAGAAGTCTCTTCT+GGG 0.476671 tig0021743:+65671 None:intergenic
ATACGAGGAAGTAACTTCTC+TGG 0.476939 tig0021743:+62523 None:intergenic
TTCGTTCGCTCCGACGTCGC+CGG 0.480213 tig0021743:-66322 Msa1393560:CDS
CCTGAAGGGGATTGGATATG+TGG 0.480446 tig0021743:-65982 Msa1393560:CDS
TGGGAAGGGAGATTCCCTTA+AGG 0.483741 tig0021743:-66346 Msa1393560:CDS
CTGAATTGAAGAAGAGAAAT+GGG 0.485254 tig0021743:-66365 Msa1393560:CDS
GAGTGTGATAGTTGTTTAGG+TGG 0.490466 tig0021743:-66045 Msa1393560:CDS
TCATGTCTCTGCGGCAGCAA+TGG 0.493304 tig0021743:-59780 Msa1393560:CDS
TGGTCTGAAATTGGCTTCAC+CGG 0.494433 tig0021743:-63153 Msa1393560:CDS
TTCTGTACAATATTCTTGAC+TGG 0.495175 tig0021743:-62770 Msa1393560:CDS
GCAGCTACTGGTGTCGGGTA+CGG 0.495197 tig0021743:-65705 Msa1393560:CDS
TAAATGAGAGGTTTGTAGAA+GGG 0.497183 tig0021743:-62971 Msa1393560:CDS
ATTCACGGTGTTCCGGGCAC+TGG 0.498438 tig0021743:-63384 Msa1393560:CDS
AACAATGCAGTTGGCAATGA+CGG 0.500318 tig0021743:-59805 Msa1393560:intron
GTGGCACAGTTTCAAACGCT+TGG 0.500569 tig0021743:-64138 Msa1393560:CDS
GTTACAAGAGCTGGGAGAAA+AGG 0.500757 tig0021743:-66240 Msa1393560:CDS
AAAGCCTCTGGATGCCCATT+CGG 0.503391 tig0021743:+62494 None:intergenic
GGATGGCAGCTACTGGTGTC+GGG 0.503839 tig0021743:-65710 Msa1393560:CDS
TTCACCTTGTAAATATTCTC+CGG 0.504027 tig0021743:+63134 None:intergenic
CCGAGAAGAGGGAGAAGAAT+CGG 0.504286 tig0021743:-66609 Msa1393560:CDS
GCAGCTAACTGATGGCTTGT+CGG 0.504655 tig0021743:+63811 None:intergenic
TGAGGTCAAGGTTGAGAAAA+CGG 0.504688 tig0021743:-66265 Msa1393560:CDS
ATCTGTGAGGGTCGTAAGAT+GGG 0.506846 tig0021743:-65958 Msa1393560:CDS
CCTCGTATATCAAGCCGAAT+GGG 0.511380 tig0021743:-62508 Msa1393560:CDS
GATAGTACCTTGCCAGTGCC+CGG 0.512164 tig0021743:+63372 None:intergenic
ATCCCAGAAGAGACTTCTGT+TGG 0.512492 tig0021743:-65673 Msa1393560:CDS
TCAAGACGAGATTTCGCAGC+TGG 0.512532 tig0021743:+66573 None:intergenic
TTGCGTGGAGCTGCGAGCTA+GGG 0.512598 tig0021743:+66823 None:intergenic
CGGAAACTAAGAAGAGAAAG+AGG 0.512657 tig0021743:-66293 Msa1393560:CDS
GATCTGTGAGGGTCGTAAGA+TGG 0.515072 tig0021743:-65959 Msa1393560:CDS
TTGAAGTCAGAAGTTGATGC+AGG 0.515204 tig0021743:-63209 Msa1393560:CDS
ATTTCTGACAATCAATGTCT+GGG 0.516051 tig0021743:-63420 Msa1393560:CDS
AGCTTGGAATGTGGCTTGGT+TGG 0.517458 tig0021743:+62747 None:intergenic
CAAATATATCAATTCCATTG+AGG 0.517649 tig0021743:+62422 None:intergenic
TGGAGCAAATGCAATTTCAT+CGG 0.518476 tig0021743:+66446 None:intergenic
TACTGTTTCGTGGAGATCAA+TGG 0.518500 tig0021743:-63173 Msa1393560:CDS
GATCCTGATAATGTTGCTGC+AGG 0.521500 tig0021743:-62160 Msa1393560:intron
TACAAGAAAGTTGTTTATGA+CGG 0.522606 tig0021743:-66192 Msa1393560:CDS
GCATTAAATGGACACAGGGT+TGG 0.523201 tig0021743:-63017 Msa1393560:CDS
AAAGAGGAAGAATGAGGTCA+AGG 0.524216 tig0021743:-66277 Msa1393560:CDS
GGTAAGGAATGAGGAGTGAG+AGG 0.524682 tig0021743:+66714 None:intergenic
CAAACCTCTCATTTAGCAAA+CGG 0.525477 tig0021743:+62979 None:intergenic
TAACTTGAATATGAGGTGCT+TGG 0.525790 tig0021743:+60790 None:intergenic
ATGGGGCAAAGCAAAGCCTC+TGG 0.529383 tig0021743:+62482 None:intergenic
AGCGTTTGAAACTGTGCCAC+TGG 0.529464 tig0021743:+64141 None:intergenic
TCAACATACTTATTTCTACA+AGG 0.530757 tig0021743:+63560 None:intergenic
TTGAAGAAGAGAAATGGGAA+GGG 0.532289 tig0021743:-66360 Msa1393560:CDS
GCTCGTGCACCATAGCTGTC+AGG 0.532743 tig0021743:+60230 None:intergenic
TTTGCAGTCTCTCAGCGAAA+AGG 0.532801 tig0021743:+58511 None:intergenic
CGTGGATCTACGTGTAGGTA+AGG 0.533392 tig0021743:+66698 None:intergenic
CTCGATGTTGGCCAAATCGT+TGG 0.533909 tig0021743:+65612 None:intergenic
TGGATGGCAGCTACTGGTGT+CGG 0.533932 tig0021743:-65711 Msa1393560:CDS
ATCTGTAAAGAAGAGGAAGC+AGG 0.534383 tig0021743:-66403 Msa1393560:CDS
GAATGTGTGAGAAGCTCCAA+TGG 0.536796 tig0021743:+66856 None:intergenic
CGAGCTTTACAAAACAGGAA+TGG 0.537464 tig0021743:-60212 Msa1393560:CDS
CTGTTGCATCCCACAAAAGA+GGG 0.540002 tig0021743:-58271 Msa1393560:three_prime_UTR
AATTAGCTTGGAATGTGGCT+TGG 0.540690 tig0021743:+62743 None:intergenic
CGGTGTTCCGGGCACTGGCA+AGG 0.541081 tig0021743:-63379 Msa1393560:intron
ATCCAGAAGTGGAGGAATGT+AGG 0.542570 tig0021743:-66101 Msa1393560:CDS
GAGATTCGGCAACGAGATTG+GGG 0.543738 tig0021743:+66649 None:intergenic
TAAATGGACACAGGGTTGGA+TGG 0.543748 tig0021743:-63013 Msa1393560:CDS
GTGAAGCAGGTGCCAAGCAC+AGG 0.543759 tig0021743:-59491 Msa1393560:CDS
AGTGTGATAGTTGTTTAGGT+GGG 0.547500 tig0021743:-66044 Msa1393560:CDS
CCTGTTGCATCCCACAAAAG+AGG 0.550274 tig0021743:-58272 Msa1393560:three_prime_UTR
CATGATATCCTCCTGCAAGT+TGG 0.553301 tig0021743:-59741 Msa1393560:CDS
CCGGAACACCGTGAATATAG+AGG 0.553353 tig0021743:+63391 None:intergenic
CATCGAAATCTGTAAAGAAG+AGG 0.553381 tig0021743:-66410 Msa1393560:CDS
GGCTTCAATCAAGTGATCTG+TGG 0.554304 tig0021743:-65873 Msa1393560:CDS
TCCTCGTATATCAAGCCGAA+TGG 0.555101 tig0021743:-62509 Msa1393560:CDS
TTCTTGGGAGTTGAAGCCAT+TGG 0.556223 tig0021743:+66786 None:intergenic
GGGATGATGTTTATGTGAAG+AGG 0.559397 tig0021743:-66152 Msa1393560:CDS
CTTCATAATAGTACCGGAGA+TGG 0.559807 tig0021743:+58372 None:intergenic
GCTTCAATCAAGTGATCTGT+GGG 0.560115 tig0021743:-65872 Msa1393560:CDS
TGCAGGAGGATATCATGTCC+AGG 0.562882 tig0021743:+59747 None:intergenic
GAAGAGAAAGAGGAAGAATG+AGG 0.565359 tig0021743:-66283 Msa1393560:CDS
AACAATCAACTCCGAGAAGA+GGG 0.566074 tig0021743:-66620 Msa1393560:CDS
AGCTCTCTGCTCAAATTATG+TGG 0.566453 tig0021743:+65643 None:intergenic
TTCATACTGCAGCTAACTGA+TGG 0.566543 tig0021743:+63803 None:intergenic
ATTGAAGAAGAGAAATGGGA+AGG 0.568468 tig0021743:-66361 Msa1393560:CDS
TTGGATATGTGGGATCTGTG+AGG 0.570339 tig0021743:-65971 Msa1393560:CDS
TGTTAGCATCTGTTGTATGT+TGG 0.570381 tig0021743:-58344 Msa1393560:three_prime_UTR
ACAATCCATCACCTCGATGT+TGG 0.575437 tig0021743:+65600 None:intergenic
CTCTCCGTTTGCTAAATGAG+AGG 0.575524 tig0021743:-62983 Msa1393560:CDS
AGGGAAGAAAACTGGAGAAG+AGG 0.577588 tig0021743:-62952 Msa1393560:CDS
TCCCAGAAGAGACTTCTGTT+GGG 0.577921 tig0021743:-65672 Msa1393560:CDS
AAGAAGTGGATGGCAGCTAC+TGG 0.578137 tig0021743:-65717 Msa1393560:CDS
GTTGTATGTTGGTCCTTGGG+TGG 0.579846 tig0021743:-58333 Msa1393560:three_prime_UTR
CGTTGAAAGATGTTCCTGAA+GGG 0.581179 tig0021743:-65996 Msa1393560:CDS
AAATCCAAATCTCGTTCCAA+TGG 0.581999 tig0021743:-66802 Msa1393560:CDS
TCCGATTGATCCGGCGACGT+CGG 0.582582 tig0021743:+66312 None:intergenic
TGTGGGCTGCTCGCATTGAG+AGG 0.583937 tig0021743:-65855 Msa1393560:intron
ACTGGTCTTCATAATAGTAC+CGG 0.584777 tig0021743:+58366 None:intergenic
TATGCCAAAGCTAGCAATGA+GGG 0.585809 tig0021743:-64200 Msa1393560:CDS
TGAGAGGTGAGAATTGTGAA+CGG 0.585848 tig0021743:+66730 None:intergenic
ATTAGATATTTGGACAGCCA+AGG 0.589801 tig0021743:+58482 None:intergenic
GAACGAGATTTGGATTTGCG+TGG 0.590028 tig0021743:+66808 None:intergenic
TTGCTATGTCATGATCCCTA+AGG 0.591823 tig0021743:-64225 Msa1393560:CDS
TTGTTAGAACAATGCGTCAG+AGG 0.591921 tig0021743:-65894 Msa1393560:CDS
CCGTTGAAAGATGTTCCTGA+AGG 0.592540 tig0021743:-65997 Msa1393560:CDS
CTGAAGGGGATTGGATATGT+GGG 0.593658 tig0021743:-65981 Msa1393560:CDS
GAGACTGCAAAGATCTACCT+TGG 0.593824 tig0021743:-58499 Msa1393560:CDS
ACACAGGGTTGGATGGAAAG+AGG 0.594099 tig0021743:-63006 Msa1393560:CDS
AGGAAAGGGACTTGTTTGCA+TGG 0.594820 tig0021743:-60844 Msa1393560:CDS
ACAAGCTTCTTACCCTTCGG+CGG 0.596059 tig0021743:+65913 None:intergenic
CAACAATCAACTCCGAGAAG+AGG 0.596926 tig0021743:-66621 Msa1393560:CDS
TAGCAGTATATGGAAAGAAG+TGG 0.597595 tig0021743:-65731 Msa1393560:intron
AAACGGTTGTTACAAGAGCT+GGG 0.597984 tig0021743:-66248 Msa1393560:CDS
GTTGAAAGATGTTCCTGAAG+GGG 0.598838 tig0021743:-65995 Msa1393560:CDS
AAGCTCCAATGGAGAAATTG+GGG 0.600807 tig0021743:+66867 None:intergenic
ATGAAGCATTAAATGGACAC+AGG 0.600808 tig0021743:-63022 Msa1393560:CDS
TATTTCTGAAGAAGAGAAGT+CGG 0.601275 tig0021743:-66479 Msa1393560:CDS
TACAGAATCTGCACAAGGGA+CGG 0.603574 tig0021743:-63703 Msa1393560:intron
GCTGTAAGTTGGGTGAGTGT+AGG 0.604738 tig0021743:-59524 Msa1393560:CDS
GACTAATCTTGAAAGAGCAA+AGG 0.606188 tig0021743:-63618 Msa1393560:CDS
GTCTGCATATTTCCAAAGCA+CGG 0.606454 tig0021743:+62227 None:intergenic
TGGATATGTGGGATCTGTGA+GGG 0.607873 tig0021743:-65970 Msa1393560:CDS
TTCACCGGAGAATATTTACA+AGG 0.608665 tig0021743:-63138 Msa1393560:intron
TTCAGGGATAGCAAATACAA+TGG 0.610395 tig0021743:-62551 Msa1393560:intron
CGGCGGTGAATTTGAAGTTG+GGG 0.617237 tig0021743:-66172 Msa1393560:CDS
CCTTCAGGAACATCTTTCAA+CGG 0.617438 tig0021743:+65997 None:intergenic
AGAAGATGCTACTTCTGATG+AGG 0.621654 tig0021743:-66127 Msa1393560:CDS
ACAAGAGCTGGGAGAAAAGG+TGG 0.622286 tig0021743:-66237 Msa1393560:CDS
TCATGATTTCGTCCCCAGAA+CGG 0.622364 tig0021743:+66070 None:intergenic
ATACATAGACAGACCACCCA+AGG 0.623444 tig0021743:+58320 None:intergenic
GGGATGCAACAGGTAATACA+AGG 0.624016 tig0021743:+58282 None:intergenic
TCGTCAATGAGCAAAATACA+TGG 0.624876 tig0021743:+62921 None:intergenic
TGAGGAAGATCCAGAAGTGG+AGG 0.628093 tig0021743:-66109 Msa1393560:CDS
GTATGCCAAAGCTAGCAATG+AGG 0.629062 tig0021743:-64201 Msa1393560:CDS
CTACGTGTAGGTAAGGAATG+AGG 0.635826 tig0021743:+66705 None:intergenic
CAATGAGCAAAATACATGGT+CGG 0.635961 tig0021743:+62925 None:intergenic
CCCATTCGGCTTGATATACG+AGG 0.638148 tig0021743:+62508 None:intergenic
TGAAGCATTAAATGGACACA+GGG 0.640411 tig0021743:-63021 Msa1393560:CDS
AGTATCGGAGTTCAAGCGCG+TGG 0.641574 tig0021743:+66680 None:intergenic
AAGCGCGTGGATCTACGTGT+AGG 0.642274 tig0021743:+66693 None:intergenic
GCTACTGGTGTCGGGTACGG+TGG 0.642777 tig0021743:-65702 Msa1393560:CDS
GCTAACTGATGGCTTGTCGG+TGG 0.645325 tig0021743:+63814 None:intergenic
TGATGAGGAAGATCCAGAAG+TGG 0.647235 tig0021743:-66112 Msa1393560:CDS
ATCACAATTAGCTTGGAATG+TGG 0.648587 tig0021743:+62738 None:intergenic
AGTATATGGAAAGAAGTGGA+TGG 0.649668 tig0021743:-65727 Msa1393560:CDS
AGATTCGGCAACGAGATTGG+GGG 0.651554 tig0021743:+66650 None:intergenic
TCATGACATAGCAATGTCGA+AGG 0.658256 tig0021743:+64234 None:intergenic
AAGAAAGTTGTTTATGACGG+CGG 0.658330 tig0021743:-66189 Msa1393560:CDS
GAGATAACGACATTCATCAA+AGG 0.658884 tig0021743:-63447 Msa1393560:CDS
ACAAGAGTGTCATAATAGTG+TGG 0.659197 tig0021743:+58239 None:intergenic
TGAGTGTACTCTCAGTGATG+AGG 0.663135 tig0021743:-63235 Msa1393560:CDS
TCTTGTAACCAGAAACCAGT+CGG 0.664804 tig0021743:-62889 Msa1393560:intron
CGAAGACTGGAACATCGACA+AGG 0.665993 tig0021743:-63905 Msa1393560:CDS
AAGCTGCTGATAATTATATG+GGG 0.670932 tig0021743:+62465 None:intergenic
GAGGTGAGAATTGTGAACGG+AGG 0.673704 tig0021743:+66733 None:intergenic
TGACATTGATGATGAAAGAG+AGG 0.674539 tig0021743:-64114 Msa1393560:intron
AGTCTTACCCAACTTGCAGG+AGG 0.676386 tig0021743:+59733 None:intergenic
TGCGAGCTAGGGTTTGATGG+AGG 0.679189 tig0021743:+66834 None:intergenic
TCAGGAACATCTTTCAACGG+TGG 0.680289 tig0021743:+66000 None:intergenic
GCTTTACAAAACAGGAATGG+GGG 0.682677 tig0021743:-60209 Msa1393560:CDS
AGCTTTACAAAACAGGAATG+GGG 0.683635 tig0021743:-60210 Msa1393560:CDS
AAAAGGTGGAAAGATTGCGA+AGG 0.684724 tig0021743:-66223 Msa1393560:CDS
AATGATACAGAATCTGCACA+AGG 0.686949 tig0021743:-63708 Msa1393560:intron
TGTTGCATCCCACAAAAGAG+GGG 0.687207 tig0021743:-58270 Msa1393560:three_prime_UTR
CATACAACAGATGCTAACAC+TGG 0.690075 tig0021743:+58348 None:intergenic
GTAAAGAAGAGGAAGCAGGA+AGG 0.690620 tig0021743:-66399 Msa1393560:CDS
AGTTGCAGCTCAATTTCCCG+AGG 0.692840 tig0021743:-59461 Msa1393560:intron
TGAAGATGTTGAATATGATG+AGG 0.693036 tig0021743:-63863 Msa1393560:CDS
CAACGATTTGGCCAACATCG+AGG 0.693338 tig0021743:-65611 Msa1393560:intron
TTTCTGACAATCAATGTCTG+GGG 0.698842 tig0021743:-63419 Msa1393560:CDS
CAAGCCGAATGGGCATCCAG+AGG 0.706358 tig0021743:-62498 Msa1393560:CDS
AATATGAATATGACATCCAG+TGG 0.707312 tig0021743:-64157 Msa1393560:CDS
ATGACGGTTTCATGTCTCTG+CGG 0.719836 tig0021743:-59789 Msa1393560:CDS
ATGATACAGAATCTGCACAA+GGG 0.728041 tig0021743:-63707 Msa1393560:intron
TAGAATTCTGATGAGAGTGA+CGG 0.741239 tig0021743:-63931 Msa1393560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAATTTATTTATTTTA+AGG - tig0021743:65135-65154 Msa1393560:intron 0.0%
!!! TTTTATTAAAAGAAAAACAT+CGG - tig0021743:63325-63344 Msa1393560:intron 10.0%
!! AAAAATTAACATAAGTTAAT+AGG + tig0021743:66676-66695 None:intergenic 10.0%
!! CCAACTATTTAAATTAATAT+GGG + tig0021743:60063-60082 None:intergenic 15.0%
!! TCCAACTATTTAAATTAATA+TGG + tig0021743:60064-60083 None:intergenic 15.0%
!! TAATCAAATACAGTAAAAAA+AGG - tig0021743:60151-60170 Msa1393560:intron 15.0%
!! AATCAAATACAGTAAAAAAA+GGG - tig0021743:60152-60171 Msa1393560:intron 15.0%
!! TTTATTATATGAAACAAGAT+TGG - tig0021743:62273-62292 Msa1393560:intron 15.0%
!! CACATTATTACAAAATTTAT+AGG - tig0021743:63176-63195 Msa1393560:CDS 15.0%
!! AGATGATAACTATATAATTT+GGG + tig0021743:63579-63598 None:intergenic 15.0%
!! TAGATGATAACTATATAATT+TGG + tig0021743:63580-63599 None:intergenic 15.0%
!!! AAAAAATATTTGAAATGTCA+AGG + tig0021743:64355-64374 None:intergenic 15.0%
!!! ACTATAGTTCTATTATTTCT+TGG + tig0021743:59748-59767 None:intergenic 20.0%
!! CCCATATTAATTTAAATAGT+TGG - tig0021743:60060-60079 Msa1393560:intron 20.0%
!! TTAAATTGAATGCAAAAAGA+AGG + tig0021743:60134-60153 None:intergenic 20.0%
!! ATCAAATACAGTAAAAAAAG+GGG - tig0021743:60153-60172 Msa1393560:intron 20.0%
!! ATAGATAAAAACCAATTCTA+AGG + tig0021743:60344-60363 None:intergenic 20.0%
!!! AATTGGTTTTTATCTATTCT+TGG - tig0021743:60347-60366 Msa1393560:intron 20.0%
!! ATCACAAATTCTATCAAATT+TGG + tig0021743:60565-60584 None:intergenic 20.0%
!!! GCAACATAATTTACATTTTT+TGG + tig0021743:60647-60666 None:intergenic 20.0%
!!! TTATGCTCAATTTTAATGAT+GGG + tig0021743:60716-60735 None:intergenic 20.0%
!!! CTTGTACATATTTTATAAGA+CGG + tig0021743:61005-61024 None:intergenic 20.0%
!! TTACACAACAAAAATTTCAT+AGG + tig0021743:61363-61382 None:intergenic 20.0%
!! TATATGACCTAAAATAGTAT+TGG + tig0021743:62049-62068 None:intergenic 20.0%
!! GTTTCATATAATAAATAACG+TGG + tig0021743:62268-62287 None:intergenic 20.0%
!! TATATTTGAAAAACAAGCTA+TGG - tig0021743:62683-62702 Msa1393560:intron 20.0%
!! TACAAAATTTATAGGATTTC+AGG - tig0021743:63184-63203 Msa1393560:CDS 20.0%
!!! ATACATTAAAATCTGAAGTT+TGG + tig0021743:63218-63237 None:intergenic 20.0%
!! ATAAAATTACACCAATGTAA+TGG + tig0021743:63311-63330 None:intergenic 20.0%
!!! AATAAGTTGATCAAATCTAT+TGG - tig0021743:63463-63482 Msa1393560:intron 20.0%
!! TAGTTTCAACAAAATTATTG+TGG + tig0021743:63853-63872 None:intergenic 20.0%
!! TTAGGAATCTTATAACATTT+GGG + tig0021743:64380-64399 None:intergenic 20.0%
!!! CATTTTGCTTTTTAAAAAAG+TGG + tig0021743:64491-64510 None:intergenic 20.0%
!!! TTTTTAAAAAGCAAAATGAG+TGG - tig0021743:64493-64512 Msa1393560:intron 20.0%
!!! CTTTTATATATTCATTTAGC+TGG - tig0021743:64744-64763 Msa1393560:intron 20.0%
!!! TTTTCAGTTTAATAGCATTA+TGG - tig0021743:65043-65062 Msa1393560:intron 20.0%
!! GGATAATATATCAAATTTCT+TGG - tig0021743:65156-65175 Msa1393560:intron 20.0%
!! AAAATTAAGATCAAAACTAC+TGG + tig0021743:65767-65786 None:intergenic 20.0%
!!! TAAATTAAGCATTTTAGACA+CGG + tig0021743:65803-65822 None:intergenic 20.0%
!! AGAAACAGACTTAAAAAATT+GGG - tig0021743:65882-65901 Msa1393560:CDS 20.0%
!! TTTCTGTTCCATTTAATAAA+AGG + tig0021743:66247-66266 None:intergenic 20.0%
!! AATCTGTTTAATAATAAGTC+TGG - tig0021743:66318-66337 Msa1393560:CDS 20.0%
!! ATCTGTTTAATAATAAGTCT+GGG - tig0021743:66319-66338 Msa1393560:CDS 20.0%
!! TAAATAAAACAGAAATGAAC+AGG + tig0021743:66474-66493 None:intergenic 20.0%
!! TGATTGTTGAATTTGAGATT+CGG + tig0021743:58458-58477 None:intergenic 25.0%
! TACAAGAAAGTTGTTTATGA+CGG - tig0021743:58898-58917 Msa1393560:intron 25.0%
! ATGTAAATAAACCGCATAAT+TGG + tig0021743:59325-59344 None:intergenic 25.0%
! TGTGGTATACTATATTAGAA+AGG - tig0021743:59525-59544 Msa1393560:CDS 25.0%
!! TCAACTTTTATATGCCTTAA+TGG - tig0021743:59885-59904 Msa1393560:intron 25.0%
!! TCAACTTTTATATGCCTTAA+TGG - tig0021743:59885-59904 Msa1393560:intron 25.0%
!! CAATGTATTTCCAACATTTT+AGG + tig0021743:60250-60269 None:intergenic 25.0%
!!! AAGATTCACTCACATTTTTT+GGG + tig0021743:60432-60451 None:intergenic 25.0%
!!! AAAGATTCACTCACATTTTT+TGG + tig0021743:60433-60452 None:intergenic 25.0%
! AAAAATGTGAGTGAATCTTT+AGG - tig0021743:60433-60452 Msa1393560:intron 25.0%
!!! ATTTCATGTAACTTTTGAGT+AGG - tig0021743:60489-60508 Msa1393560:intron 25.0%
!!! TATGCTCAATTTTAATGATG+GGG + tig0021743:60715-60734 None:intergenic 25.0%
!!! GTTATGCTCAATTTTAATGA+TGG + tig0021743:60717-60736 None:intergenic 25.0%
! TTAAAATTGAGCATAACTTG+TGG - tig0021743:60720-60739 Msa1393560:intron 25.0%
! CGTCTTATAAAATATGTACA+AGG - tig0021743:61003-61022 Msa1393560:intron 25.0%
!! TAACTCTTTTATGAGAAGAA+TGG + tig0021743:61030-61049 None:intergenic 25.0%
!!! GATGACTGTATATTTTTACA+TGG - tig0021743:61136-61155 Msa1393560:intron 25.0%
!!! TCAACATACTTATTTCTACA+AGG + tig0021743:61533-61552 None:intergenic 25.0%
! AAGTATGTTGAAGTTTAACA+TGG - tig0021743:61542-61561 Msa1393560:intron 25.0%
!!! CATGCTTTTATTTAGAGAAA+TGG - tig0021743:61618-61637 Msa1393560:intron 25.0%
!! GAACTTTAGTTTAGATATCA+CGG - tig0021743:61783-61802 Msa1393560:intron 25.0%
!! CACAAATCTTTTACTGTTTT+TGG - tig0021743:61982-62001 Msa1393560:intron 25.0%
!! GTCATATATGAAGCATTAAA+TGG - tig0021743:62061-62080 Msa1393560:intron 25.0%
!! TATAACTTTCCTTTTATCAC+AGG - tig0021743:62297-62316 Msa1393560:intron 25.0%
! ACAGATGTAATATCAAATAC+TGG - tig0021743:62431-62450 Msa1393560:CDS 25.0%
! CAGATGTAATATCAAATACT+GGG - tig0021743:62432-62451 Msa1393560:CDS 25.0%
! TGTAATAATGTACTGAATTC+AGG - tig0021743:62522-62541 Msa1393560:CDS 25.0%
! GTAATAATGTACTGAATTCA+GGG - tig0021743:62523-62542 Msa1393560:CDS 25.0%
! CAAATATATCAATTCCATTG+AGG + tig0021743:62671-62690 None:intergenic 25.0%
! ACACATTTGTAAACAATATG+TGG - tig0021743:63074-63093 Msa1393560:intron 25.0%
! AGTAATCTAGTTGTTTATGT+GGG + tig0021743:63140-63159 None:intergenic 25.0%
! AAGTAATCTAGTTGTTTATG+TGG + tig0021743:63141-63160 None:intergenic 25.0%
! AACACTAGATTTACATTATC+GGG + tig0021743:63247-63266 None:intergenic 25.0%
! GAACACTAGATTTACATTAT+CGG + tig0021743:63248-63267 None:intergenic 25.0%
! TGTTCTCATTAATACTTATG+CGG - tig0021743:63263-63282 Msa1393560:intron 25.0%
! TAATGAATTCTCCATTACAT+TGG - tig0021743:63297-63316 Msa1393560:intron 25.0%
!! CCTTATATTGATTATGAAGA+GGG + tig0021743:63362-63381 None:intergenic 25.0%
!! ACCTTATATTGATTATGAAG+AGG + tig0021743:63363-63382 None:intergenic 25.0%
! AAACAAAAGTTCATGAATCA+TGG - tig0021743:63539-63558 Msa1393560:intron 25.0%
!! AATTGATGGTAATTCATTGA+AGG + tig0021743:63636-63655 None:intergenic 25.0%
!!! ATTTCCAATTTTGGTAATGT+AGG + tig0021743:63702-63721 None:intergenic 25.0%
! ACATTACCAAAATTGGAAAT+TGG - tig0021743:63702-63721 Msa1393560:intron 25.0%
! CATTACCAAAATTGGAAATT+GGG - tig0021743:63703-63722 Msa1393560:intron 25.0%
! ACATGTTTATCATAATCTCA+TGG + tig0021743:63913-63932 None:intergenic 25.0%
! TTGAAGTGGACAAAAAAATA+TGG + tig0021743:63939-63958 None:intergenic 25.0%
! GTTCTATCAAAAACCATATT+TGG + tig0021743:64018-64037 None:intergenic 25.0%
! TTTCAACTAACTTGAATATG+AGG + tig0021743:64310-64329 None:intergenic 25.0%
! TAGGAATCTTATAACATTTG+GGG + tig0021743:64379-64398 None:intergenic 25.0%
! CTTAGGAATCTTATAACATT+TGG + tig0021743:64381-64400 None:intergenic 25.0%
!!! AGACTTTATGCTGTTTTATA+TGG - tig0021743:64547-64566 Msa1393560:intron 25.0%
!! AAAAACTGGCTTAAAGATAA+AGG + tig0021743:64681-64700 None:intergenic 25.0%
! GAATTTCATGAAATTACTTG+AGG - tig0021743:64707-64726 Msa1393560:intron 25.0%
!! ATTTCACCTCTTCAATTTTA+AGG + tig0021743:64996-65015 None:intergenic 25.0%
!!! TTTCATTTTAACAATGCAGT+TGG - tig0021743:65276-65295 Msa1393560:intron 25.0%
! CTGGAAAATAATGATTGATT+TGG + tig0021743:65748-65767 None:intergenic 25.0%
! GAGAAACAGACTTAAAAAAT+TGG - tig0021743:65881-65900 Msa1393560:CDS 25.0%
!!! TTTGACTTACAAATTTTGTG+TGG - tig0021743:65971-65990 Msa1393560:CDS 25.0%
!!! TGTTGATTTTTCAAAAGACA+CGG + tig0021743:66004-66023 None:intergenic 25.0%
! ACTAATCTAGATGACAATAA+CGG - tig0021743:66192-66211 Msa1393560:CDS 25.0%
! AGATGAAAATCTTAAAGTAG+TGG - tig0021743:66423-66442 Msa1393560:CDS 25.0%
! CCATTCTTACATTAGATATT+TGG + tig0021743:66621-66640 None:intergenic 25.0%
! CCAAATATCTAATGTAAGAA+TGG - tig0021743:66618-66637 Msa1393560:CDS 25.0%
! CTATGTATTACACATGTATT+AGG - tig0021743:66785-66804 Msa1393560:CDS 25.0%
GGATGAGTATATAGGAAAAA+TGG + tig0021743:58205-58224 None:intergenic 30.0%
! TATTTCTGAAGAAGAGAAGT+CGG - tig0021743:58611-58630 Msa1393560:intron 30.0%
TTTACAGATTTCGATGAATC+TGG + tig0021743:58676-58695 None:intergenic 30.0%
CTGAATTGAAGAAGAGAAAT+GGG - tig0021743:58725-58744 Msa1393560:intron 30.0%
ATTGAGTGTGATAGTTGTTT+AGG - tig0021743:59042-59061 Msa1393560:intron 30.0%
TTATTTGTACGCCAATTATG+CGG - tig0021743:59311-59330 Msa1393560:intron 30.0%
AGTTCAATGTTAGCAGTATA+TGG - tig0021743:59349-59368 Msa1393560:intron 30.0%
!! GTGATGGATTGTTAATGATT+TGG - tig0021743:59501-59520 Msa1393560:CDS 30.0%
!! GATTGTTAATGATTTGGTTG+TGG - tig0021743:59507-59526 Msa1393560:CDS 30.0%
GGTATACTATATTAGAAAGG+TGG - tig0021743:59528-59547 Msa1393560:intron 30.0%
CAATATGCTCTTTGATAGAT+TGG + tig0021743:59587-59606 None:intergenic 30.0%
TAGATGTTCCAAAGTTATCA+AGG + tig0021743:59633-59652 None:intergenic 30.0%
!! ATAACTTTGGAACATCTAGA+TGG - tig0021743:59635-59654 Msa1393560:intron 30.0%
ATAATAGCTGTCGTCAATTA+TGG - tig0021743:59780-59799 Msa1393560:CDS 30.0%
AAGTTTGATAAGAGCCATTA+AGG + tig0021743:59902-59921 None:intergenic 30.0%
AAGTTTGATAAGAGCCATTA+AGG + tig0021743:59902-59921 None:intergenic 30.0%
TTATCAAACTTTAGCATCCT+TGG - tig0021743:59985-60004 Msa1393560:intron 30.0%
TATCAAACTTTAGCATCCTT+GGG - tig0021743:59986-60005 Msa1393560:intron 30.0%
AAAGAAGGAAACGAATAATC+AGG + tig0021743:60119-60138 None:intergenic 30.0%
AAAACTCCATCCTAAAATGT+TGG - tig0021743:60237-60256 Msa1393560:CDS 30.0%
!! GTATTTCCAACATTTTAGGA+TGG + tig0021743:60246-60265 None:intergenic 30.0%
! TCTTCTTTAGAAGAAGGAAA+TGG - tig0021743:60305-60324 Msa1393560:intron 30.0%
!! TCTTTTGGAAACCTTAGAAT+TGG - tig0021743:60330-60349 Msa1393560:intron 30.0%
TGAAATGTTTATGTGAGTGT+AGG - tig0021743:60612-60631 Msa1393560:intron 30.0%
!!! AGTCTCGTTTTTTAATGTTC+AGG - tig0021743:60766-60785 Msa1393560:intron 30.0%
!!! GTCTCGTTTTTTAATGTTCA+GGG - tig0021743:60767-60786 Msa1393560:intron 30.0%
AATATGAATATGACATCCAG+TGG - tig0021743:60933-60952 Msa1393560:intron 30.0%
TCAATATTACCACTGCTAAA+TGG + tig0021743:61054-61073 None:intergenic 30.0%
TATACAGATACACAGTTGAA+TGG - tig0021743:61080-61099 Msa1393560:intron 30.0%
TGAAGATGTTGAATATGATG+AGG - tig0021743:61227-61246 Msa1393560:intron 30.0%
AAAGAATTCCAGAGCATATA+AGG - tig0021743:61438-61457 Msa1393560:intron 30.0%
TTTCTACAAGGTAAAGACTT+AGG + tig0021743:61521-61540 None:intergenic 30.0%
TTAGTAATAGTCGCTTAACA+TGG + tig0021743:61592-61611 None:intergenic 30.0%
! TATTTCTGACAATCAATGTC+TGG - tig0021743:61669-61688 Msa1393560:intron 30.0%
ATTTCTGACAATCAATGTCT+GGG - tig0021743:61670-61689 Msa1393560:intron 30.0%
TATCTAAACTAAAGTTCTGC+TGG + tig0021743:61780-61799 None:intergenic 30.0%
!!! CTCCTTTTTTATGTGTGTAA+CGG - tig0021743:61825-61844 Msa1393560:intron 30.0%
TTCACCTTGTAAATATTCTC+CGG + tig0021743:61959-61978 None:intergenic 30.0%
! CCTAAAATAGTATTGGAAGT+CGG + tig0021743:62042-62061 None:intergenic 30.0%
TAAATGAGAGGTTTGTAGAA+GGG - tig0021743:62119-62138 Msa1393560:intron 30.0%
TTCTGTACAATATTCTTGAC+TGG - tig0021743:62320-62339 Msa1393560:intron 30.0%
!! TAAGTTTTTGTTGTCCACAA+AGG + tig0021743:62497-62516 None:intergenic 30.0%
AAGCTGCTGATAATTATATG+GGG + tig0021743:62628-62647 None:intergenic 30.0%
GAAGCTGCTGATAATTATAT+GGG + tig0021743:62629-62648 None:intergenic 30.0%
TGAAGCTGCTGATAATTATA+TGG + tig0021743:62630-62649 None:intergenic 30.0%
! GACATGATCTTTATTTCTTC+AGG - tig0021743:62815-62834 Msa1393560:intron 30.0%
TGATGACACGTAAAATCTAT+GGG + tig0021743:62967-62986 None:intergenic 30.0%
ATGATGACACGTAAAATCTA+TGG + tig0021743:62968-62987 None:intergenic 30.0%
! TAGATTTTACGTGTCATCAT+AGG - tig0021743:62968-62987 Msa1393560:CDS 30.0%
TAATTGGCAACATGTGAAAT+AGG + tig0021743:63018-63037 None:intergenic 30.0%
! AACAAATGAGACTTTTGTGA+AGG + tig0021743:63051-63070 None:intergenic 30.0%
!! TATCTGACTTGGTTATTGTT+AGG + tig0021743:63109-63128 None:intergenic 30.0%
! TAAAATCTGAAGTTTGGTCT+TGG + tig0021743:63212-63231 None:intergenic 30.0%
GTTCTCATTAATACTTATGC+GGG - tig0021743:63264-63283 Msa1393560:intron 30.0%
CCCTCTTCATAATCAATATA+AGG - tig0021743:63359-63378 Msa1393560:intron 30.0%
AGCCATATATCTATAACTTC+AGG - tig0021743:63779-63798 Msa1393560:intron 30.0%
CTCCTGAAGTTATAGATATA+TGG + tig0021743:63784-63803 None:intergenic 30.0%
CATATATCTATAACTTCAGG+AGG - tig0021743:63782-63801 Msa1393560:intron 30.0%
! GTAATGTAACAGACTCTTTT+TGG + tig0021743:63891-63910 None:intergenic 30.0%
CGGAATAACAAATATTGAAG+TGG + tig0021743:63953-63972 None:intergenic 30.0%
! TGGTTTTTGATAGAACACTA+TGG - tig0021743:64022-64041 Msa1393560:intron 30.0%
! TCATCCTTTTTCTTCTATAG+TGG - tig0021743:64115-64134 Msa1393560:CDS 30.0%
CATTCCACTATAGAAGAAAA+AGG + tig0021743:64122-64141 None:intergenic 30.0%
TAACTTTACATCTCATGACT+TGG + tig0021743:64423-64442 None:intergenic 30.0%
TGAAATTCGCAAGAAAAAAC+TGG + tig0021743:64695-64714 None:intergenic 30.0%
ATCACCTTCAAAACGAAAAA+AGG + tig0021743:64810-64829 None:intergenic 30.0%
TTTCCACCTTAAAATTGAAG+AGG - tig0021743:64987-65006 Msa1393560:intron 30.0%
ATTAAACTGAAAAAGAGCTG+AGG + tig0021743:65036-65055 None:intergenic 30.0%
AACTTAGATGTGTTATATCC+TGG - tig0021743:65181-65200 Msa1393560:intron 30.0%
!! TGTTGACTTTCTAGTAGAAA+AGG - tig0021743:65204-65223 Msa1393560:intron 30.0%
GATAAAATAGACATGCAACT+AGG + tig0021743:65519-65538 None:intergenic 30.0%
!!! ATTTTTTGCAGCTGTAAGTT+GGG - tig0021743:65556-65575 Msa1393560:intron 30.0%
TGTAGTTTAGGCATATGTAT+TGG - tig0021743:65939-65958 Msa1393560:CDS 30.0%
TGAAAAATCAACAACCCTTA+CGG - tig0021743:66011-66030 Msa1393560:CDS 30.0%
AAATGAGTATTTCAGCAGTT+TGG - tig0021743:66058-66077 Msa1393560:CDS 30.0%
! TGCAACAGCCTTTTATTAAA+TGG - tig0021743:66236-66255 Msa1393560:CDS 30.0%
ATGCATGTATGCATGTTAAA+GGG + tig0021743:66400-66419 None:intergenic 30.0%
TATGCATGTATGCATGTTAA+AGG + tig0021743:66401-66420 None:intergenic 30.0%
TTTAACATGCATACATGCAT+AGG - tig0021743:66400-66419 Msa1393560:CDS 30.0%
ATTTATGACCCACAATTATG+TGG - tig0021743:66489-66508 Msa1393560:CDS 30.0%
CACTAATACCACATAATTGT+GGG + tig0021743:66500-66519 None:intergenic 30.0%
TCACTAATACCACATAATTG+TGG + tig0021743:66501-66520 None:intergenic 30.0%
TACATAATTGTTACCATCTC+CGG - tig0021743:66705-66724 Msa1393560:CDS 30.0%
GAAATTGGGGATGAGTATAT+AGG + tig0021743:58213-58232 None:intergenic 35.0%
AAATCCAAATCTCGTTCCAA+TGG - tig0021743:58288-58307 Msa1393560:three_prime_UTR 35.0%
TGGAGCAAATGCAATTTCAT+CGG + tig0021743:58647-58666 None:intergenic 35.0%
CATCGAAATCTGTAAAGAAG+AGG - tig0021743:58680-58699 Msa1393560:intron 35.0%
GCTGAATTGAAGAAGAGAAA+TGG - tig0021743:58724-58743 Msa1393560:intron 35.0%
ATTGAAGAAGAGAAATGGGA+AGG - tig0021743:58729-58748 Msa1393560:intron 35.0%
TTGAAGAAGAGAAATGGGAA+GGG - tig0021743:58730-58749 Msa1393560:intron 35.0%
TTCTTAGTTTCCGATTGATC+CGG + tig0021743:58790-58809 None:intergenic 35.0%
AAGAAAGTTGTTTATGACGG+CGG - tig0021743:58901-58920 Msa1393560:intron 35.0%
AGTGTGATAGTTGTTTAGGT+GGG - tig0021743:59046-59065 Msa1393560:intron 35.0%
TAGCAGTATATGGAAAGAAG+TGG - tig0021743:59359-59378 Msa1393560:intron 35.0%
AGTATATGGAAAGAAGTGGA+TGG - tig0021743:59363-59382 Msa1393560:intron 35.0%
ATTTGAGCAGAGAGCTATAT+CGG - tig0021743:59454-59473 Msa1393560:intron 35.0%
AGAAAGGTGGTTAGTATGAA+TGG - tig0021743:59541-59560 Msa1393560:intron 35.0%
! GATAGATTGGAAGTACAACT+AGG + tig0021743:59574-59593 None:intergenic 35.0%
! GTGACAATCCTTGATAACTT+TGG - tig0021743:59622-59641 Msa1393560:intron 35.0%
CTTTAATTGAGTATGCACTG+TGG + tig0021743:59676-59695 None:intergenic 35.0%
TGTGAGCTTGTCAATATTCA+AGG + tig0021743:60281-60300 None:intergenic 35.0%
! CATTCGTCTTCTTTAGAAGA+AGG - tig0021743:60299-60318 Msa1393560:intron 35.0%
! AAGAAGGAAATGGCATCTTT+TGG - tig0021743:60315-60334 Msa1393560:intron 35.0%
CTTCATAAAACCCACTTTAC+CGG + tig0021743:60392-60411 None:intergenic 35.0%
!!! ATTCTCCTTTTTTCTCATCG+TGG - tig0021743:60802-60821 Msa1393560:CDS 35.0%
GCTTCTCTGTTCAATATAGA+TGG - tig0021743:60826-60845 Msa1393560:CDS 35.0%
!! TGACATTGATGATGAAAGAG+AGG - tig0021743:60976-60995 Msa1393560:intron 35.0%
AAGAGTTAACCATTTAGCAG+TGG - tig0021743:61042-61061 Msa1393560:intron 35.0%
TAGAATTCTGATGAGAGTGA+CGG - tig0021743:61159-61178 Msa1393560:intron 35.0%
AATGATACAGAATCTGCACA+AGG - tig0021743:61382-61401 Msa1393560:intron 35.0%
ATGATACAGAATCTGCACAA+GGG - tig0021743:61383-61402 Msa1393560:intron 35.0%
TTCTTTGGACTTCAGAAGAT+AGG - tig0021743:61410-61429 Msa1393560:intron 35.0%
GACTAATCTTGAAAGAGCAA+AGG - tig0021743:61472-61491 Msa1393560:intron 35.0%
GAGATAACGACATTCATCAA+AGG - tig0021743:61643-61662 Msa1393560:intron 35.0%
TTTCTGACAATCAATGTCTG+GGG - tig0021743:61671-61690 Msa1393560:intron 35.0%
GAACTATCTACATTGCTTGT+TGG - tig0021743:61746-61765 Msa1393560:intron 35.0%
TGCCGTTACACACATAAAAA+AGG + tig0021743:61830-61849 None:intergenic 35.0%
TTCACCGGAGAATATTTACA+AGG - tig0021743:61952-61971 Msa1393560:intron 35.0%
!! GGTTTTATGACCAAATTCCT+TGG - tig0021743:62003-62022 Msa1393560:intron 35.0%
! CCGACTTCCAATACTATTTT+AGG - tig0021743:62039-62058 Msa1393560:intron 35.0%
! ATGAAGCATTAAATGGACAC+AGG - tig0021743:62068-62087 Msa1393560:intron 35.0%
! TGAAGCATTAAATGGACACA+GGG - tig0021743:62069-62088 Msa1393560:intron 35.0%
CAAACCTCTCATTTAGCAAA+CGG + tig0021743:62114-62133 None:intergenic 35.0%
CTAAATGAGAGGTTTGTAGA+AGG - tig0021743:62118-62137 Msa1393560:intron 35.0%
TTTGTAGAAGGGAAGAAAAC+TGG - tig0021743:62130-62149 Msa1393560:intron 35.0%
CAATGAGCAAAATACATGGT+CGG + tig0021743:62168-62187 None:intergenic 35.0%
TCGTCAATGAGCAAAATACA+TGG + tig0021743:62172-62191 None:intergenic 35.0%
AATGACAAGTTTCTTGCAAC+AGG + tig0021743:62239-62258 None:intergenic 35.0%
GTTGCAAGAAACTTGTCATT+AGG - tig0021743:62239-62258 Msa1393560:CDS 35.0%
TGTACAGAACCTGTGATAAA+AGG + tig0021743:62309-62328 None:intergenic 35.0%
! ATCACAATTAGCTTGGAATG+TGG + tig0021743:62355-62374 None:intergenic 35.0%
CATTCCAAGCTAATTGTGAT+AGG - tig0021743:62355-62374 Msa1393560:intron 35.0%
CTTACCTATCACAATTAGCT+TGG + tig0021743:62362-62381 None:intergenic 35.0%
TAAGAACTACAATGCCTTTG+TGG - tig0021743:62480-62499 Msa1393560:CDS 35.0%
TTCAGGGATAGCAAATACAA+TGG - tig0021743:62539-62558 Msa1393560:CDS 35.0%
!! TCTCCAAGTCTTTTGAAGAT+TGG - tig0021743:62728-62747 Msa1393560:intron 35.0%
!! CTCCAAGTCTTTTGAAGATT+GGG - tig0021743:62729-62748 Msa1393560:intron 35.0%
AACCCAATCTTCAAAAGACT+TGG + tig0021743:62734-62753 None:intergenic 35.0%
! CCTTTACCATTTTATGCACA+CGG - tig0021743:62754-62773 Msa1393560:CDS 35.0%
! CTTTACCATTTTATGCACAC+GGG - tig0021743:62755-62774 Msa1393560:CDS 35.0%
! TGAAGGCACATGTAACTAAT+TGG + tig0021743:63034-63053 None:intergenic 35.0%
GAAGAAAACAACTTAGTGGT+TGG + tig0021743:63495-63514 None:intergenic 35.0%
GCTTGAAGAAAACAACTTAG+TGG + tig0021743:63499-63518 None:intergenic 35.0%
TCATAACCTCTACCTTTAGA+TGG - tig0021743:63600-63619 Msa1393560:CDS 35.0%
CAGGAATTTGAGTCAATTGA+TGG + tig0021743:63650-63669 None:intergenic 35.0%
TAAATGTGAAGCAACTCTTG+GGG + tig0021743:63760-63779 None:intergenic 35.0%
CTAAATGTGAAGCAACTCTT+GGG + tig0021743:63761-63780 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATA+TGG - tig0021743:64002-64021 Msa1393560:intron 35.0%
GCAGATGCAAATGAATTAGT+GGG + tig0021743:64221-64240 None:intergenic 35.0%
AGCAGATGCAAATGAATTAG+TGG + tig0021743:64222-64241 None:intergenic 35.0%
! TAACTTGAATATGAGGTGCT+TGG + tig0021743:64303-64322 None:intergenic 35.0%
TAGTTGAAATTTGCAGTGTG+TGG - tig0021743:64321-64340 Msa1393560:intron 35.0%
TTCATGAAATTACTTGAGGC+AGG - tig0021743:64711-64730 Msa1393560:intron 35.0%
TCATGAAATTACTTGAGGCA+GGG - tig0021743:64712-64731 Msa1393560:intron 35.0%
!!! TGCACCTTTTTTCGTTTTGA+AGG - tig0021743:64803-64822 Msa1393560:intron 35.0%
ATGAAAAACTGTTCCAGACT+TGG - tig0021743:64828-64847 Msa1393560:intron 35.0%
! CAAAATTTTCCTGACAGCTA+TGG - tig0021743:64851-64870 Msa1393560:intron 35.0%
GAGCTTTACAAAACAGGAAT+GGG - tig0021743:64879-64898 Msa1393560:intron 35.0%
AGCTTTACAAAACAGGAATG+GGG - tig0021743:64880-64899 Msa1393560:intron 35.0%
! GAAGCATACCTTTTCAAAAG+TGG + tig0021743:64910-64929 None:intergenic 35.0%
!! TCACCTCTTCAATTTTAAGG+TGG + tig0021743:64993-65012 None:intergenic 35.0%
! CTTTCTAGTAGAAAAGGCAT+TGG - tig0021743:65210-65229 Msa1393560:intron 35.0%
AAATAGACATGCAACTAGGA+TGG + tig0021743:65515-65534 None:intergenic 35.0%
AGCTGCAAAAAATGGAAGAA+GGG + tig0021743:65549-65568 None:intergenic 35.0%
CAACTTACAGCTGCAAAAAA+TGG + tig0021743:65557-65576 None:intergenic 35.0%
!!! CATTTTTTGCAGCTGTAAGT+TGG - tig0021743:65555-65574 Msa1393560:intron 35.0%
!! TCATCGGTTTGCATCATTAA+TGG + tig0021743:65689-65708 None:intergenic 35.0%
CTCATCATAATCTCACTCAT+CGG + tig0021743:65705-65724 None:intergenic 35.0%
ATGACGACACTTTGTAGTTT+AGG - tig0021743:65927-65946 Msa1393560:CDS 35.0%
GAAAAATCAACAACCCTTAC+GGG - tig0021743:66012-66031 Msa1393560:CDS 35.0%
TTGGTCAGTCTGTAAATAGA+TGG - tig0021743:66077-66096 Msa1393560:CDS 35.0%
TGGATACAAACACTTAAGTG+AGG - tig0021743:66097-66116 Msa1393560:CDS 35.0%
! GTTTCATTCAAGAGTACATC+CGG - tig0021743:66141-66160 Msa1393560:CDS 35.0%
TAATAAAAGGCTGTTGCACA+GGG + tig0021743:66234-66253 None:intergenic 35.0%
TTAATAAAAGGCTGTTGCAC+AGG + tig0021743:66235-66254 None:intergenic 35.0%
TGCATGTATGCATGTTAAAG+GGG + tig0021743:66399-66418 None:intergenic 35.0%
ATTAGATATTTGGACAGCCA+AGG + tig0021743:66611-66630 None:intergenic 35.0%
!! ACTGGTCTTCATAATAGTAC+CGG + tig0021743:66727-66746 None:intergenic 35.0%
TGTTAGCATCTGTTGTATGT+TGG - tig0021743:66746-66765 Msa1393560:CDS 35.0%
!! ACAAGAGTGTCATAATAGTG+TGG + tig0021743:66854-66873 None:intergenic 35.0%
AAGCTCCAATGGAGAAATTG+GGG + tig0021743:58226-58245 None:intergenic 40.0%
GAAGCTCCAATGGAGAAATT+GGG + tig0021743:58227-58246 None:intergenic 40.0%
AGAAGCTCCAATGGAGAAAT+TGG + tig0021743:58228-58247 None:intergenic 40.0%
GGAGATTGAAGAAGCTTCTT+GGG + tig0021743:58322-58341 None:intergenic 40.0%
TGAGAGGTGAGAATTGTGAA+CGG + tig0021743:58363-58382 None:intergenic 40.0%
AACAATCAACTCCGAGAAGA+GGG - tig0021743:58470-58489 Msa1393560:exon 40.0%
! TTCGATGAATCTGGCGATTT+TGG + tig0021743:58667-58686 None:intergenic 40.0%
ATCTGTAAAGAAGAGGAAGC+AGG - tig0021743:58687-58706 Msa1393560:intron 40.0%
GAAGCAGGAAGGTGAAAAAA+CGG - tig0021743:58702-58721 Msa1393560:intron 40.0%
CGGAAACTAAGAAGAGAAAG+AGG - tig0021743:58797-58816 Msa1393560:intron 40.0%
GAAGAGAAAGAGGAAGAATG+AGG - tig0021743:58807-58826 Msa1393560:intron 40.0%
AAAGAGGAAGAATGAGGTCA+AGG - tig0021743:58813-58832 Msa1393560:intron 40.0%
TGAGGTCAAGGTTGAGAAAA+CGG - tig0021743:58825-58844 Msa1393560:intron 40.0%
AAAACGGTTGTTACAAGAGC+TGG - tig0021743:58841-58860 Msa1393560:intron 40.0%
AAACGGTTGTTACAAGAGCT+GGG - tig0021743:58842-58861 Msa1393560:intron 40.0%
AAAAGGTGGAAAGATTGCGA+AGG - tig0021743:58867-58886 Msa1393560:intron 40.0%
GGGATGATGTTTATGTGAAG+AGG - tig0021743:58938-58957 Msa1393560:intron 40.0%
! AGAAGATGCTACTTCTGATG+AGG - tig0021743:58963-58982 Msa1393560:intron 40.0%
!!! TGTAGGTTTTGTTTCCGTTC+TGG - tig0021743:59006-59025 Msa1393560:intron 40.0%
!!! GTAGGTTTTGTTTCCGTTCT+GGG - tig0021743:59007-59026 Msa1393560:intron 40.0%
!!! TAGGTTTTGTTTCCGTTCTG+GGG - tig0021743:59008-59027 Msa1393560:intron 40.0%
GAGTGTGATAGTTGTTTAGG+TGG - tig0021743:59045-59064 Msa1393560:intron 40.0%
CCTTCAGGAACATCTTTCAA+CGG + tig0021743:59096-59115 None:intergenic 40.0%
CGTTGAAAGATGTTCCTGAA+GGG - tig0021743:59094-59113 Msa1393560:intron 40.0%
GTTGAAAGATGTTCCTGAAG+GGG - tig0021743:59095-59114 Msa1393560:intron 40.0%
CTAACAAGCTTCTTACCCTT+CGG + tig0021743:59183-59202 None:intergenic 40.0%
TTGTTAGAACAATGCGTCAG+AGG - tig0021743:59196-59215 Msa1393560:intron 40.0%
GCTTCAATCAAGTGATCTGT+GGG - tig0021743:59218-59237 Msa1393560:intron 40.0%
AGCTCTCTGCTCAAATTATG+TGG + tig0021743:59450-59469 None:intergenic 40.0%
TAATTGAGTATGCACTGTGG+AGG + tig0021743:59673-59692 None:intergenic 40.0%
AGTCTGTCTGAATCTTACTC+TGG - tig0021743:59694-59713 Msa1393560:intron 40.0%
ACGATCACATCTCTACTTAC+AGG - tig0021743:59862-59881 Msa1393560:intron 40.0%
AAGATGCCACTCATTATCTC+CGG - tig0021743:60370-60389 Msa1393560:intron 40.0%
ACTTTACCGGAGATAATGAG+TGG + tig0021743:60379-60398 None:intergenic 40.0%
ACTCATTATCTCCGGTAAAG+TGG - tig0021743:60378-60397 Msa1393560:intron 40.0%
CTCATTATCTCCGGTAAAGT+GGG - tig0021743:60379-60398 Msa1393560:intron 40.0%
!!! TCACTCACATTTTTTGGGCT+TGG + tig0021743:60427-60446 None:intergenic 40.0%
TTTATGTGAGTGTAGGCAAG+AGG - tig0021743:60619-60638 Msa1393560:intron 40.0%
GGGAAAAATTACACGCACTA+AGG + tig0021743:60695-60714 None:intergenic 40.0%
AAGCACCACGATGAGAAAAA+AGG + tig0021743:60810-60829 None:intergenic 40.0%
TCATGACATAGCAATGTCGA+AGG + tig0021743:60859-60878 None:intergenic 40.0%
TTGCTATGTCATGATCCCTA+AGG - tig0021743:60865-60884 Msa1393560:intron 40.0%
!! TAGCTTTGGCATACTCCTTA+GGG + tig0021743:60883-60902 None:intergenic 40.0%
TATGCCAAAGCTAGCAATGA+GGG - tig0021743:60890-60909 Msa1393560:intron 40.0%
TTCATACTGCAGCTAACTGA+TGG + tig0021743:61290-61309 None:intergenic 40.0%
TTGTGAGACCTTATATGCTC+TGG + tig0021743:61449-61468 None:intergenic 40.0%
!! TTGAAGTCAGAAGTTGATGC+AGG - tig0021743:61881-61900 Msa1393560:intron 40.0%
CATCAAACCATACTGTTTCG+TGG - tig0021743:61907-61926 Msa1393560:intron 40.0%
TTGATCTCCACGAAACAGTA+TGG + tig0021743:61917-61936 None:intergenic 40.0%
TACTGTTTCGTGGAGATCAA+TGG - tig0021743:61917-61936 Msa1393560:intron 40.0%
! GGAGATCAATGGTCTGAAAT+TGG - tig0021743:61928-61947 Msa1393560:intron 40.0%
CATAAGGCAACCAAGGAATT+TGG + tig0021743:62016-62035 None:intergenic 40.0%
CAAATTCCTTGGTTGCCTTA+TGG - tig0021743:62014-62033 Msa1393560:intron 40.0%
TATTGGAAGTCGGAACCATA+AGG + tig0021743:62032-62051 None:intergenic 40.0%
TCTTGTAACCAGAAACCAGT+CGG - tig0021743:62201-62220 Msa1393560:CDS 40.0%
!! AGGATTTGTTAGTTACCGAC+TGG + tig0021743:62219-62238 None:intergenic 40.0%
! AATTAGCTTGGAATGTGGCT+TGG + tig0021743:62350-62369 None:intergenic 40.0%
ATACGAGGAAGTAACTTCTC+TGG + tig0021743:62570-62589 None:intergenic 40.0%
CCGTGTGCATAAAATGGTAA+AGG + tig0021743:62757-62776 None:intergenic 40.0%
GTCTGCATATTTCCAAAGCA+CGG + tig0021743:62866-62885 None:intergenic 40.0%
ATACCTGCAGCAACATTATC+AGG + tig0021743:62936-62955 None:intergenic 40.0%
GTGTCATCATAGGAGATAGA+GGG - tig0021743:62978-62997 Msa1393560:CDS 40.0%
GGGTGAAGATTTATCTGACT+TGG + tig0021743:63120-63139 None:intergenic 40.0%
TTTCAGACTAGAGTTCAGTC+TGG + tig0021743:63673-63692 None:intergenic 40.0%
! AGAGGCCCAATTTCCAATTT+TGG + tig0021743:63711-63730 None:intergenic 40.0%
GCTAAATGTGAAGCAACTCT+TGG + tig0021743:63762-63781 None:intergenic 40.0%
CAAAATTATTGTGGAGCAGC+AGG + tig0021743:63844-63863 None:intergenic 40.0%
!! CTTTTTGGAGATACTGATGC+TGG + tig0021743:63876-63895 None:intergenic 40.0%
CCTTCACACATAGGTAACAA+CGG + tig0021743:63973-63992 None:intergenic 40.0%
AATACCAAGCCTTCACACAT+AGG + tig0021743:63982-64001 None:intergenic 40.0%
! AGGCTTGGTATTCAATGAGT+TGG - tig0021743:63990-64009 Msa1393560:intron 40.0%
!! AGTGATGCTGACTGCATTTT+AGG + tig0021743:64159-64178 None:intergenic 40.0%
! GCACTGATACTTTATGTCTG+AGG - tig0021743:64184-64203 Msa1393560:CDS 40.0%
CAGCATAAAGTCTTCGTTCA+TGG + tig0021743:64540-64559 None:intergenic 40.0%
!!! TATGCTGTTTTATATGGCGC+TGG - tig0021743:64553-64572 Msa1393560:intron 40.0%
!!! TTTTATATGGCGCTGGCATT+AGG - tig0021743:64560-64579 Msa1393560:intron 40.0%
! CAGGAAAATTTTGCCAAGTC+TGG + tig0021743:64844-64863 None:intergenic 40.0%
CGAGCTTTACAAAACAGGAA+TGG - tig0021743:64878-64897 Msa1393560:intron 40.0%
GCTTTACAAAACAGGAATGG+GGG - tig0021743:64881-64900 Msa1393560:intron 40.0%
TCTACTAGAAAGTCAACACC+AGG + tig0021743:65202-65221 None:intergenic 40.0%
AACAATGCAGTTGGCAATGA+CGG - tig0021743:65285-65304 Msa1393560:intron 40.0%
ATGATATCCTCCTGCAAGTT+GGG - tig0021743:65350-65369 Msa1393560:intron 40.0%
ATAAGTCTTACCCAACTTGC+AGG + tig0021743:65363-65382 None:intergenic 40.0%
! TACATGTTTCTGCGTTGAAG+TGG - tig0021743:65393-65412 Msa1393560:intron 40.0%
CAGCTGCAAAAAATGGAAGA+AGG + tig0021743:65550-65569 None:intergenic 40.0%
! AGGATCATTTTGTGTGAAGC+AGG - tig0021743:65586-65605 Msa1393560:intron 40.0%
!! AGGGCTTTGAGAAATAACCT+CGG + tig0021743:65649-65668 None:intergenic 40.0%
GGCAGCTGAAGAAGTAATAA+GGG + tig0021743:65668-65687 None:intergenic 40.0%
TGGCAGCTGAAGAAGTAATA+AGG + tig0021743:65669-65688 None:intergenic 40.0%
! TAAGCATTTTAGACACGGCT+CGG + tig0021743:65798-65817 None:intergenic 40.0%
AGCATTAGTAGTACCCGTAA+GGG + tig0021743:66028-66047 None:intergenic 40.0%
AAGCATTAGTAGTACCCGTA+AGG + tig0021743:66029-66048 None:intergenic 40.0%
TTCTAGCAACGCAATGATAC+CGG + tig0021743:66163-66182 None:intergenic 40.0%
AGAAAATGTCCAAAGACGCA+AGG - tig0021743:66262-66281 Msa1393560:CDS 40.0%
TAACTGTAACCTTGCGTCTT+TGG + tig0021743:66274-66293 None:intergenic 40.0%
! CTTCATAATAGTACCGGAGA+TGG + tig0021743:66721-66740 None:intergenic 40.0%
CATACAACAGATGCTAACAC+TGG + tig0021743:66745-66764 None:intergenic 40.0%
ATCTGTTGTATGTTGGTCCT+TGG - tig0021743:66753-66772 Msa1393560:CDS 40.0%
TCTGTTGTATGTTGGTCCTT+GGG - tig0021743:66754-66773 Msa1393560:CDS 40.0%
CTCATCCCCAATTTCTCCAT+TGG - tig0021743:58218-58237 Msa1393560:three_prime_UTR 45.0%
GAATGTGTGAGAAGCTCCAA+TGG + tig0021743:58237-58256 None:intergenic 45.0%
GAACGAGATTTGGATTTGCG+TGG + tig0021743:58285-58304 None:intergenic 45.0%
GAAGCCATTGGAACGAGATT+TGG + tig0021743:58295-58314 None:intergenic 45.0%
TTCTTGGGAGTTGAAGCCAT+TGG + tig0021743:58307-58326 None:intergenic 45.0%
GGGAGATTGAAGAAGCTTCT+TGG + tig0021743:58323-58342 None:intergenic 45.0%
! TGAACGGAGGTTGGATTTTG+AGG + tig0021743:58347-58366 None:intergenic 45.0%
TGAGAATTGTGAACGGAGGT+TGG + tig0021743:58356-58375 None:intergenic 45.0%
CTACGTGTAGGTAAGGAATG+AGG + tig0021743:58388-58407 None:intergenic 45.0%
! ATTGGGGGTTATGGGAGTAT+CGG + tig0021743:58428-58447 None:intergenic 45.0%
TGAGATTCGGCAACGAGATT+GGG + tig0021743:58445-58464 None:intergenic 45.0%
TTGAGATTCGGCAACGAGAT+TGG + tig0021743:58446-58465 None:intergenic 45.0%
CAACAATCAACTCCGAGAAG+AGG - tig0021743:58469-58488 Msa1393560:exon 45.0%
GTAAAGAAGAGGAAGCAGGA+AGG - tig0021743:58691-58710 Msa1393560:intron 45.0%
GTTACAAGAGCTGGGAGAAA+AGG - tig0021743:58850-58869 Msa1393560:intron 45.0%
! ACGGCGGTGAATTTGAAGTT+GGG - tig0021743:58917-58936 Msa1393560:intron 45.0%
TGATGAGGAAGATCCAGAAG+TGG - tig0021743:58978-58997 Msa1393560:intron 45.0%
ATCCAGAAGTGGAGGAATGT+AGG - tig0021743:58989-59008 Msa1393560:intron 45.0%
AACCTACATTCCTCCACTTC+TGG + tig0021743:58994-59013 None:intergenic 45.0%
TCATGATTTCGTCCCCAGAA+CGG + tig0021743:59023-59042 None:intergenic 45.0%
TCAGGAACATCTTTCAACGG+TGG + tig0021743:59093-59112 None:intergenic 45.0%
CCGTTGAAAGATGTTCCTGA+AGG - tig0021743:59093-59112 Msa1393560:intron 45.0%
AAGATGTTCCTGAAGGGGAT+TGG - tig0021743:59100-59119 Msa1393560:intron 45.0%
CTGAAGGGGATTGGATATGT+GGG - tig0021743:59109-59128 Msa1393560:intron 45.0%
TTGGATATGTGGGATCTGTG+AGG - tig0021743:59119-59138 Msa1393560:intron 45.0%
TGGATATGTGGGATCTGTGA+GGG - tig0021743:59120-59139 Msa1393560:intron 45.0%
ATCTGTGAGGGTCGTAAGAT+GGG - tig0021743:59132-59151 Msa1393560:intron 45.0%
GGCTTCAATCAAGTGATCTG+TGG - tig0021743:59217-59236 Msa1393560:intron 45.0%
ATCCCAGAAGAGACTTCTGT+TGG - tig0021743:59417-59436 Msa1393560:intron 45.0%
TCCCAGAAGAGACTTCTGTT+GGG - tig0021743:59418-59437 Msa1393560:intron 45.0%
GCTATATCGGACCAACGATT+TGG - tig0021743:59467-59486 Msa1393560:CDS 45.0%
ACAATCCATCACCTCGATGT+TGG + tig0021743:59493-59512 None:intergenic 45.0%
!! ACTCTGGAAAAGAGTACTCG+TGG - tig0021743:59710-59729 Msa1393560:intron 45.0%
ACGATCACGTCTCTACTTAC+AGG - tig0021743:59936-59955 Msa1393560:intron 45.0%
AAACTTTAGCATCCTTGGGC+TGG - tig0021743:59990-60009 Msa1393560:intron 45.0%
TAAACAAGTCAACCAGCCCA+AGG + tig0021743:60005-60024 None:intergenic 45.0%
AGTAGGATATCGCAGCTTGT+AGG - tig0021743:60506-60525 Msa1393560:intron 45.0%
GAGTCATGATGCACAACTAG+TGG - tig0021743:60531-60550 Msa1393560:intron 45.0%
TCATGATGCACAACTAGTGG+AGG - tig0021743:60534-60553 Msa1393560:intron 45.0%
CATGATGCACAACTAGTGGA+GGG - tig0021743:60535-60554 Msa1393560:intron 45.0%
!! CTAGCTTTGGCATACTCCTT+AGG + tig0021743:60884-60903 None:intergenic 45.0%
GTATGCCAAAGCTAGCAATG+AGG - tig0021743:60889-60908 Msa1393560:intron 45.0%
! ATCTCCCTCATTGCTAGCTT+TGG + tig0021743:60897-60916 None:intergenic 45.0%
TACAGAATCTGCACAAGGGA+CGG - tig0021743:61387-61406 Msa1393560:intron 45.0%
CCTCTATATTCACGGTGTTC+CGG - tig0021743:61699-61718 Msa1393560:intron 45.0%
CTCTATATTCACGGTGTTCC+GGG - tig0021743:61700-61719 Msa1393560:intron 45.0%
TGAGTGTACTCTCAGTGATG+AGG - tig0021743:61855-61874 Msa1393560:intron 45.0%
! TGGTCTGAAATTGGCTTCAC+CGG - tig0021743:61937-61956 Msa1393560:intron 45.0%
GCATTAAATGGACACAGGGT+TGG - tig0021743:62073-62092 Msa1393560:intron 45.0%
TAAATGGACACAGGGTTGGA+TGG - tig0021743:62077-62096 Msa1393560:intron 45.0%
! CTCTCCGTTTGCTAAATGAG+AGG - tig0021743:62107-62126 Msa1393560:intron 45.0%
AGGGAAGAAAACTGGAGAAG+AGG - tig0021743:62138-62157 Msa1393560:intron 45.0%
!! GTTAGTTACCGACTGGTTTC+TGG + tig0021743:62212-62231 None:intergenic 45.0%
TCCTCGTATATCAAGCCGAA+TGG - tig0021743:62581-62600 Msa1393560:intron 45.0%
CCTCGTATATCAAGCCGAAT+GGG - tig0021743:62582-62601 Msa1393560:intron 45.0%
! ATCATTTCGAGTCGCCTCAA+TGG - tig0021743:62654-62673 Msa1393560:intron 45.0%
AAGTGCCCGTGTGCATAAAA+TGG + tig0021743:62763-62782 None:intergenic 45.0%
!! CTTCAGGTTGCAGCTATATC+AGG - tig0021743:62831-62850 Msa1393560:intron 45.0%
! GATCCTGATAATGTTGCTGC+AGG - tig0021743:62930-62949 Msa1393560:CDS 45.0%
CGTGTCATCATAGGAGATAG+AGG - tig0021743:62977-62996 Msa1393560:CDS 45.0%
GCAAGACCATCTAAAGGTAG+AGG + tig0021743:63609-63628 None:intergenic 45.0%
GGATCAGCAAGACCATCTAA+AGG + tig0021743:63615-63634 None:intergenic 45.0%
AAGCAACTCTTGGGGAAATC+AGG + tig0021743:63752-63771 None:intergenic 45.0%
CCGTTGTTACCTATGTGTGA+AGG - tig0021743:63970-63989 Msa1393560:intron 45.0%
GTTACCTATGTGTGAAGGCT+TGG - tig0021743:63975-63994 Msa1393560:intron 45.0%
! AAGCCTTATCCCACTATGTG+GGG + tig0021743:64071-64090 None:intergenic 45.0%
! CAAGCCTTATCCCACTATGT+GGG + tig0021743:64072-64091 None:intergenic 45.0%
TTCATTTGCATCTGCTCTCC+AGG - tig0021743:64226-64245 Msa1393560:CDS 45.0%
ATGCAAACAAGTCCCTTTCC+TGG + tig0021743:64247-64266 None:intergenic 45.0%
! AGGAAAGGGACTTGTTTGCA+TGG - tig0021743:64246-64265 Msa1393560:CDS 45.0%
!! AGATGTGACTGCTAGTCTTG+TGG - tig0021743:64620-64639 Msa1393560:intron 45.0%
GTGCACGAGCTTTACAAAAC+AGG - tig0021743:64873-64892 Msa1393560:intron 45.0%
!! GGGGGAAACCACTTTTGAAA+AGG - tig0021743:64899-64918 Msa1393560:intron 45.0%
TGAAAAAGAGCTGAGGACGA+AGG + tig0021743:65029-65048 None:intergenic 45.0%
ATGACGGTTTCATGTCTCTG+CGG - tig0021743:65301-65320 Msa1393560:intron 45.0%
! AGCAATGGTGAAGTGTTTCC+TGG - tig0021743:65325-65344 Msa1393560:intron 45.0%
CATGATATCCTCCTGCAAGT+TGG - tig0021743:65349-65368 Msa1393560:intron 45.0%
! CAACTTTTGCAACCTGTGCT+TGG + tig0021743:65614-65633 None:intergenic 45.0%
!! GGGCTTTGAGAAATAACCTC+GGG + tig0021743:65648-65667 None:intergenic 45.0%
TTTGCAGTCTCTCAGCGAAA+AGG + tig0021743:66582-66601 None:intergenic 45.0%
GAGACTGCAAAGATCTACCT+TGG - tig0021743:66591-66610 Msa1393560:CDS 45.0%
ATACATAGACAGACCACCCA+AGG + tig0021743:66773-66792 None:intergenic 45.0%
GGGATGCAACAGGTAATACA+AGG + tig0021743:66811-66830 None:intergenic 45.0%
CTGTTGCATCCCACAAAAGA+GGG - tig0021743:66819-66838 Msa1393560:CDS 45.0%
TGTTGCATCCCACAAAAGAG+GGG - tig0021743:66820-66839 Msa1393560:CDS 45.0%
!! CGGAGGTTGGATTTTGAGGA+GGG + tig0021743:58343-58362 None:intergenic 50.0%
!! ACGGAGGTTGGATTTTGAGG+AGG + tig0021743:58344-58363 None:intergenic 50.0%
GAGGTGAGAATTGTGAACGG+AGG + tig0021743:58360-58379 None:intergenic 50.0%
GGTAAGGAATGAGGAGTGAG+AGG + tig0021743:58379-58398 None:intergenic 50.0%
CGTGGATCTACGTGTAGGTA+AGG + tig0021743:58395-58414 None:intergenic 50.0%
GCAACGAGATTGGGGGTTAT+GGG + tig0021743:58436-58455 None:intergenic 50.0%
AGATTCGGCAACGAGATTGG+GGG + tig0021743:58443-58462 None:intergenic 50.0%
GAGATTCGGCAACGAGATTG+GGG + tig0021743:58444-58463 None:intergenic 50.0%
CCGATTCTTCTCCCTCTTCT+CGG + tig0021743:58484-58503 None:intergenic 50.0%
CCGAGAAGAGGGAGAAGAAT+CGG - tig0021743:58481-58500 Msa1393560:CDS 50.0%
TCAAGACGAGATTTCGCAGC+TGG + tig0021743:58520-58539 None:intergenic 50.0%
TGGGAAGGGAGATTCCCTTA+AGG - tig0021743:58744-58763 Msa1393560:intron 50.0%
CGGAGCGAACGAAACCTTAA+GGG + tig0021743:58761-58780 None:intergenic 50.0%
TCGGAGCGAACGAAACCTTA+AGG + tig0021743:58762-58781 None:intergenic 50.0%
ACAAGAGCTGGGAGAAAAGG+TGG - tig0021743:58853-58872 Msa1393560:intron 50.0%
! GACGGCGGTGAATTTGAAGT+TGG - tig0021743:58916-58935 Msa1393560:intron 50.0%
! CGGCGGTGAATTTGAAGTTG+GGG - tig0021743:58918-58937 Msa1393560:intron 50.0%
TGAGGAAGATCCAGAAGTGG+AGG - tig0021743:58981-59000 Msa1393560:intron 50.0%
CCACATATCCAATCCCCTTC+AGG + tig0021743:59111-59130 None:intergenic 50.0%
CCTGAAGGGGATTGGATATG+TGG - tig0021743:59108-59127 Msa1393560:intron 50.0%
GATCTGTGAGGGTCGTAAGA+TGG - tig0021743:59131-59150 Msa1393560:intron 50.0%
! TGATTTTCCAAAGCCGCCGA+AGG - tig0021743:59164-59183 Msa1393560:intron 50.0%
! GATTTTCCAAAGCCGCCGAA+GGG - tig0021743:59165-59184 Msa1393560:intron 50.0%
ACAAGCTTCTTACCCTTCGG+CGG + tig0021743:59180-59199 None:intergenic 50.0%
AAGAAGTGGATGGCAGCTAC+TGG - tig0021743:59373-59392 Msa1393560:intron 50.0%
GCCCAACAGAAGTCTCTTCT+GGG + tig0021743:59422-59441 None:intergenic 50.0%
CTCGATGTTGGCCAAATCGT+TGG + tig0021743:59481-59500 None:intergenic 50.0%
! CAACGATTTGGCCAACATCG+AGG - tig0021743:59479-59498 Msa1393560:CDS 50.0%
TTTGGCCAACATCGAGGTGA+TGG - tig0021743:59485-59504 Msa1393560:CDS 50.0%
! AGCGTTTGAAACTGTGCCAC+TGG + tig0021743:60952-60971 None:intergenic 50.0%
GTGGCACAGTTTCAAACGCT+TGG - tig0021743:60952-60971 Msa1393560:intron 50.0%
CGAAGACTGGAACATCGACA+AGG - tig0021743:61185-61204 Msa1393560:intron 50.0%
! GCAGCTAACTGATGGCTTGT+CGG + tig0021743:61282-61301 None:intergenic 50.0%
! GGGCGTTGCCTCTATATTCA+CGG - tig0021743:61691-61710 Msa1393560:intron 50.0%
CCGGAACACCGTGAATATAG+AGG + tig0021743:61702-61721 None:intergenic 50.0%
TCGGAACCATAAGGCAACCA+AGG + tig0021743:62023-62042 None:intergenic 50.0%
ACACAGGGTTGGATGGAAAG+AGG - tig0021743:62084-62103 Msa1393560:intron 50.0%
!! AGCTTGGAATGTGGCTTGGT+TGG + tig0021743:62346-62365 None:intergenic 50.0%
! CCCATTCGGCTTGATATACG+AGG + tig0021743:62585-62604 None:intergenic 50.0%
AAAGCCTCTGGATGCCCATT+CGG + tig0021743:62599-62618 None:intergenic 50.0%
! ATGCACACGGGCACTTCTTT+TGG - tig0021743:62767-62786 Msa1393560:CDS 50.0%
AGACTAGAGTTCAGTCTGGC+AGG + tig0021743:63669-63688 None:intergenic 50.0%
CTTATCCCACTATGTGGGGT+CGG + tig0021743:64067-64086 None:intergenic 50.0%
! CCAAGCCTTATCCCACTATG+TGG + tig0021743:64073-64092 None:intergenic 50.0%
! CCACATAGTGGGATAAGGCT+TGG - tig0021743:64070-64089 Msa1393560:intron 50.0%
TTGCATCTGCTCTCCAGGAA+AGG - tig0021743:64231-64250 Msa1393560:CDS 50.0%
TGCATCTGCTCTCCAGGAAA+GGG - tig0021743:64232-64251 Msa1393560:CDS 50.0%
! CACAGTCAAGACTGCTGCTT+AGG + tig0021743:64398-64417 None:intergenic 50.0%
TCTTGTGGACCAGCGATCAT+AGG - tig0021743:64635-64654 Msa1393560:intron 50.0%
CTTGTGGACCAGCGATCATA+GGG - tig0021743:64636-64655 Msa1393560:intron 50.0%
TTCCTATGCCCTATGATCGC+TGG + tig0021743:64647-64666 None:intergenic 50.0%
TGCAGGAGGATATCATGTCC+AGG + tig0021743:65346-65365 None:intergenic 50.0%
AGTCTTACCCAACTTGCAGG+AGG + tig0021743:65360-65379 None:intergenic 50.0%
! GCTGTAAGTTGGGTGAGTGT+AGG - tig0021743:65566-65585 Msa1393560:intron 50.0%
AGTTGCAGCTCAATTTCCCG+AGG - tig0021743:65629-65648 Msa1393560:CDS 50.0%
CAAACACTTAAGTGAGGCGC+AGG - tig0021743:66103-66122 Msa1393560:CDS 50.0%
AAAAGGCTGTTGCACAGGGA+GGG + tig0021743:66230-66249 None:intergenic 50.0%
TAAAAGGCTGTTGCACAGGG+AGG + tig0021743:66231-66250 None:intergenic 50.0%
GTTGTATGTTGGTCCTTGGG+TGG - tig0021743:66757-66776 Msa1393560:CDS 50.0%
! CCTCTTTTGTGGGATGCAAC+AGG + tig0021743:66821-66840 None:intergenic 50.0%
CCTGTTGCATCCCACAAAAG+AGG - tig0021743:66818-66837 Msa1393560:CDS 50.0%
! CTGAGATGCCCCTCTTTTGT+GGG + tig0021743:66831-66850 None:intergenic 50.0%
TGCGAGCTAGGGTTTGATGG+AGG + tig0021743:58259-58278 None:intergenic 55.0%
AGCTGCGAGCTAGGGTTTGA+TGG + tig0021743:58262-58281 None:intergenic 55.0%
AAGCGCGTGGATCTACGTGT+AGG + tig0021743:58400-58419 None:intergenic 55.0%
! AGTATCGGAGTTCAAGCGCG+TGG + tig0021743:58413-58432 None:intergenic 55.0%
GGCAACGAGATTGGGGGTTA+TGG + tig0021743:58437-58456 None:intergenic 55.0%
TTCTTACCCTTCGGCGGCTT+TGG + tig0021743:59174-59193 None:intergenic 55.0%
TGGATGGCAGCTACTGGTGT+CGG - tig0021743:59379-59398 Msa1393560:intron 55.0%
CGCCCAACAGAAGTCTCTTC+TGG + tig0021743:59423-59442 None:intergenic 55.0%
AGAGTGACGGTGACGAAGAC+TGG - tig0021743:61172-61191 Msa1393560:intron 55.0%
! GCTAACTGATGGCTTGTCGG+TGG + tig0021743:61279-61298 None:intergenic 55.0%
CTGCACAAGGGACGGTTCTT+TGG - tig0021743:61395-61414 Msa1393560:intron 55.0%
GATAGTACCTTGCCAGTGCC+CGG + tig0021743:61721-61740 None:intergenic 55.0%
ATGGGGCAAAGCAAAGCCTC+TGG + tig0021743:62611-62630 None:intergenic 55.0%
TTGGGCCTCTTGAGTGTGCA+CGG - tig0021743:63721-63740 Msa1393560:intron 55.0%
TGTAGCCGTGCACACTCAAG+AGG + tig0021743:63729-63748 None:intergenic 55.0%
ACTATGTGGGGTCGGCTACA+TGG + tig0021743:64059-64078 None:intergenic 55.0%
ATGTAGCCGACCCCACATAG+TGG - tig0021743:64058-64077 Msa1393560:intron 55.0%
TGTAGCCGACCCCACATAGT+GGG - tig0021743:64059-64078 Msa1393560:intron 55.0%
! CGACCCCACATAGTGGGATA+AGG - tig0021743:64065-64084 Msa1393560:intron 55.0%
GACCAGCGATCATAGGGCAT+AGG - tig0021743:64642-64661 Msa1393560:intron 55.0%
TCATGTCTCTGCGGCAGCAA+TGG - tig0021743:65310-65329 Msa1393560:intron 55.0%
GTTTCTGCGTTGAAGTGGCC+TGG - tig0021743:65398-65417 Msa1393560:intron 55.0%
TGCGTTGAAGTGGCCTGGAA+GGG - tig0021743:65403-65422 Msa1393560:intron 55.0%
AAAGGCTGTTGCACAGGGAG+GGG + tig0021743:66229-66248 None:intergenic 55.0%
! GCTGAGATGCCCCTCTTTTG+TGG + tig0021743:66832-66851 None:intergenic 55.0%
TTGCGTGGAGCTGCGAGCTA+GGG + tig0021743:58270-58289 None:intergenic 60.0%
TTTGCGTGGAGCTGCGAGCT+AGG + tig0021743:58271-58290 None:intergenic 60.0%
TCCGACGTCGCCGGATCAAT+CGG - tig0021743:58777-58796 Msa1393560:intron 60.0%
TCCGATTGATCCGGCGACGT+CGG + tig0021743:58781-58800 None:intergenic 60.0%
! TGTGGGCTGCTCGCATTGAG+AGG - tig0021743:59235-59254 Msa1393560:intron 60.0%
GGATGGCAGCTACTGGTGTC+GGG - tig0021743:59380-59399 Msa1393560:intron 60.0%
! GCAGCTACTGGTGTCGGGTA+CGG - tig0021743:59385-59404 Msa1393560:intron 60.0%
ATTCACGGTGTTCCGGGCAC+TGG - tig0021743:61706-61725 Msa1393560:intron 60.0%
CAAGCCGAATGGGCATCCAG+AGG - tig0021743:62592-62611 Msa1393560:intron 60.0%
AGGAGATGCACGCCGTGCTT+TGG - tig0021743:62851-62870 Msa1393560:intron 60.0%
GCTCGTGCACCATAGCTGTC+AGG + tig0021743:64863-64882 None:intergenic 60.0%
CTGCGTTGAAGTGGCCTGGA+AGG - tig0021743:65402-65421 Msa1393560:intron 60.0%
AGTGGCCTGGAAGGGAGAAC+CGG - tig0021743:65411-65430 Msa1393560:intron 60.0%
GTGAAGCAGGTGCCAAGCAC+AGG - tig0021743:65599-65618 Msa1393560:intron 60.0%
TTCGTTCGCTCCGACGTCGC+CGG - tig0021743:58768-58787 Msa1393560:intron 65.0%
! GCTACTGGTGTCGGGTACGG+TGG - tig0021743:59388-59407 Msa1393560:intron 65.0%
GTGGCCTGGAAGGGAGAACC+GGG - tig0021743:65412-65431 Msa1393560:intron 65.0%
TGGCCTGGAAGGGAGAACCG+GGG - tig0021743:65413-65432 Msa1393560:intron 65.0%
! AGAACCGGGGGGTGGTGGTT+GGG - tig0021743:65426-65445 Msa1393560:intron 65.0%
!! CGGTGTTCCGGGCACTGGCA+AGG - tig0021743:61711-61730 Msa1393560:intron 70.0%
GGCCTGGAAGGGAGAACCGG+GGG - tig0021743:65414-65433 Msa1393560:intron 70.0%
GCCTGGAAGGGAGAACCGGG+GGG - tig0021743:65415-65434 Msa1393560:intron 70.0%
ACCCCCCGGTTCTCCCTTCC+AGG + tig0021743:65419-65438 None:intergenic 70.0%
TGGAAGGGAGAACCGGGGGG+TGG - tig0021743:65418-65437 Msa1393560:intron 70.0%
AAGGGAGAACCGGGGGGTGG+TGG - tig0021743:65421-65440 Msa1393560:intron 70.0%
! GAGAACCGGGGGGTGGTGGT+TGG - tig0021743:65425-65444 Msa1393560:intron 70.0%
! GAACCGGGGGGTGGTGGTTG+GGG - tig0021743:65427-65446 Msa1393560:intron 70.0%
! AACCGGGGGGTGGTGGTTGG+GGG - tig0021743:65428-65447 Msa1393560:intron 70.0%
! ACCGGGGGGTGGTGGTTGGG+GGG - tig0021743:65429-65448 Msa1393560:intron 75.0%
! CCCCCCCAACCACCACCCCC+CGG + tig0021743:65433-65452 None:intergenic 80.0%
!! CCGGGGGGTGGTGGTTGGGG+GGG - tig0021743:65430-65449 Msa1393560:intron 80.0%
!! CGGGGGGTGGTGGTTGGGGG+GGG - tig0021743:65431-65450 Msa1393560:intron 80.0%
!! GGGGGGTGGTGGTTGGGGGG+GGG - tig0021743:65432-65451 Msa1393560:intron 80.0%
Chromosome Type Strat End Strand Name
tig0021743 gene 58196 66916 58196 ID=Msa1393560;Name=Msa1393560
tig0021743 mRNA 58196 66916 58196 ID=Msa1393560-mRNA-1;Parent=Msa1393560;Name=Msa1393560-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.93|0.87|1|1|1|16|282|928
tig0021743 exon 58196 58544 58196 ID=Msa1393560-mRNA-1:exon:13891;Parent=Msa1393560-mRNA-1
tig0021743 exon 59462 59545 59462 ID=Msa1393560-mRNA-1:exon:13890;Parent=Msa1393560-mRNA-1
tig0021743 exon 59741 59817 59741 ID=Msa1393560-mRNA-1:exon:13889;Parent=Msa1393560-mRNA-1
tig0021743 exon 60192 60287 60192 ID=Msa1393560-mRNA-1:exon:13888;Parent=Msa1393560-mRNA-1
tig0021743 exon 60794 60864 60794 ID=Msa1393560-mRNA-1:exon:13887;Parent=Msa1393560-mRNA-1
tig0021743 exon 62161 62275 62161 ID=Msa1393560-mRNA-1:exon:13886;Parent=Msa1393560-mRNA-1
tig0021743 exon 62378 62568 62378 ID=Msa1393560-mRNA-1:exon:13885;Parent=Msa1393560-mRNA-1
tig0021743 exon 62736 62793 62736 ID=Msa1393560-mRNA-1:exon:13884;Parent=Msa1393560-mRNA-1
tig0021743 exon 62890 63051 62890 ID=Msa1393560-mRNA-1:exon:13883;Parent=Msa1393560-mRNA-1
tig0021743 exon 63139 63261 63139 ID=Msa1393560-mRNA-1:exon:13882;Parent=Msa1393560-mRNA-1
tig0021743 exon 63380 63479 63380 ID=Msa1393560-mRNA-1:exon:13881;Parent=Msa1393560-mRNA-1
tig0021743 exon 63569 63720 63569 ID=Msa1393560-mRNA-1:exon:13880;Parent=Msa1393560-mRNA-1
tig0021743 exon 63810 63950 63810 ID=Msa1393560-mRNA-1:exon:13879;Parent=Msa1393560-mRNA-1
tig0021743 exon 64115 64267 64115 ID=Msa1393560-mRNA-1:exon:13878;Parent=Msa1393560-mRNA-1
tig0021743 exon 65612 65747 65612 ID=Msa1393560-mRNA-1:exon:13877;Parent=Msa1393560-mRNA-1
tig0021743 exon 65856 66916 65856 ID=Msa1393560-mRNA-1:exon:13876;Parent=Msa1393560-mRNA-1
tig0021743 CDS 65856 66916 65856 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 65612 65747 65612 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 64115 64267 64115 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 63810 63950 63810 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 63569 63720 63569 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 63380 63479 63380 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 63139 63261 63139 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 62890 63051 62890 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 62736 62793 62736 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 62378 62568 62378 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 62161 62275 62161 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 60794 60864 60794 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 60192 60287 60192 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 59741 59817 59741 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 59462 59545 59462 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 CDS 58478 58544 58478 ID=Msa1393560-mRNA-1:cds;Parent=Msa1393560-mRNA-1
tig0021743 three_prime_UTR 58196 58477 58196 ID=Msa1393560-mRNA-1:three_prime_utr;Parent=Msa1393560-mRNA-1
Gene Sequence

>Msa1393560

TTGGCGCCATTTTTCCTATATACTCATCCCCAATTTCTCCATTGGAGCTTCTCACACATTCCTCCATCAAACCCTAGCTCGCAGCTCCACGCAAATCCAAATCTCGTTCCAATGGCTTCAACTCCCAAGAAGCTTCTTCAATCTCCCTCCTCAAAATCCAACCTCCGTTCACAATTCTCACCTCTCACTCCTCATTCCTTACCTACACGTAGATCCACGCGCTTGAACTCCGATACTCCCATAACCCCCAATCTCGTTGCCGAATCTCAAATTCAACAATCAACTCCGAGAAGAGGGAGAAGAATCGGTGAGAATTCTGTTCCAGCTGCGAAATCTCGTCTTGATTTCACTCGAAAAGATAAAGCTGTAACTCACAATAGTTCAATTAAAGTAGAAAATGAAATTGATTCTGCTCTATTTCTGAAGAAGAGAAGTCGGAAAGCTGAATCCGATGAAATTGCATTTGCTCCAAAATCGCCAGATTCATCGAAATCTGTAAAGAAGAGGAAGCAGGAAGGTGAAAAAACGGCTGAATTGAAGAAGAGAAATGGGAAGGGAGATTCCCTTAAGGTTTCGTTCGCTCCGACGTCGCCGGATCAATCGGAAACTAAGAAGAGAAAGAGGAAGAATGAGGTCAAGGTTGAGAAAACGGTTGTTACAAGAGCTGGGAGAAAAGGTGGAAAGATTGCGAAGGTGCAGTATTACAAGAAAGTTGTTTATGACGGCGGTGAATTTGAAGTTGGGGATGATGTTTATGTGAAGAGGAGAGAAGATGCTACTTCTGATGAGGAAGATCCAGAAGTGGAGGAATGTAGGTTTTGTTTCCGTTCTGGGGACGAAATCATGATTGAGTGTGATAGTTGTTTAGGTGGGTTTCATTTGAAATGTTTGACACCACCGTTGAAAGATGTTCCTGAAGGGGATTGGATATGTGGGATCTGTGAGGGTCGTAAGATGGGTAAAGATGTTGATTTTCCAAAGCCGCCGAAGGGTAAGAAGCTTGTTAGAACAATGCGTCAGAGGCTTCAATCAAGTGATCTGTGGGCTGCTCGCATTGAGAGTATATGGAAAGAAGTGGATGGCAGCTACTGGTGTCGGGTACGGTGGTATATGATCCCAGAAGAGACTTCTGTTGGGCGACAACCACATAATTTGAGCAGAGAGCTATATCGGACCAACGATTTGGCCAACATCGAGATGGAATCTGTCCTTCGACATTGCTATGTCATGATCCCTAAGGAGTATGCCAAAGCTAGCAATGAGGGAGATGATGTTTTCTTGTGTGAATATGAATATGACATCCAGTGGCACAGTTTCAAACGCTTGGCTGACATTGATGATGAAAGAGAGAATTCTGATGAGAGTGACGGTGACGAAGACTGGAACATCGACAAGGAATCAGACTCTGACACAGATGAAGATGTTGAATATGATGAGGAAAATATTAAAATTTCACAATCGCAACCACCGACAAGCCATCAGTTAGCTGCAAATCTGCACAAGGGACGGTTCTTTGGACTTCAGAAGATAGGCACAAAAAGAATTCCAGAGCATATAAGGTCTCACAAACAGACTAATCTTGAAAGAGCAAAGGCATCATTGCTGTTAGCTTCGCTGCCTAAGTCTTTACCTTGTAGAAATAAAGAAATGGACGAGATAACGACATTCATCAAAGGTGCTATTTCTGACAATCAATGTCTGGGGCGTTGCCTCTATATTCACGGTGTTCCGGGCACTGGCAAGACAATGAGTGTACTCTCAGTGATGAGGAGTTTGAAGTCAGAAGTTGATGCAGGAAACATCAAACCATACTGTTTCGTGGAGATCAATGGTCTGAAATTGGCTTCACCGGAGAATATTTACAAGGTCATATATGAAGCATTAAATGGACACAGGGTTGGATGGAAAGAGGCTCTCCGTTTGCTAAATGAGAGGTTTGTAGAAGGGAAGAAAACTGGAGAAGAGGCTGACCGACCATGTATTTTGCTCATTGACGAACTTGATCTTCTTGTAACCAGAAACCAGTCGGTTCTGTACAATATTCTTGACTGGCCAACCAAGCCACATTCCAAGCTAATTGTGATAGGGATAGCAAATACAATGGATCTTCCAGAGAAGTTACTTCCTCGTATATCAAGCCGAATGGGCATCCAGAGGCTTTGCTTTGCCCCATATAATTATCAGCAGCTTCAAGAAATCATTTCGAGTCGCCTCAATGGAATTGATATATTTGAAAAACAAGCTATGGAATTTGCTTCAAGAAAGTTTAGTCTCCAAGTTGCAGCTATATCAGGAGATGCACGCCGTGCTTTGGAAATATGCAGACGTGCAGCTGAAATTGCAGATTATCGAATGAAGAAGCTAGCTTCAGATCCTGATAATGTTGCTGCAGGAAAGGGACTTGTTTGCATGGCAGACGTTGAATCAGCTATTCAAGAAATGTTCCAAGCACCTCATATTCAAGTGATGAAAAACTGTTCCAGACTTGGCAAAATTTTCCTGACAGCTATGGTGCACGAGCTTTACAAAACAGGAATGGGGGAAACCACTTTTGAAAAGTTGGCAATGACGGTTTCATGTCTCTGCGGCAGCAATGGTGAAGTGTTTCCTGGACATGATATCCTCCTGCAAGTTGGCTGTAAGTTGGGTGAGTGTAGGATCATTTTGTGTGAAGCAGGTGCCAAGCACAGGTTGCAAAAGTTGCAGCTCAATTTCCCGAGCGATGATGTAGCCTTTTCGCTGAGAGACTGCAAAGATCTACCTTGGCTGTCCAAATATCTAATGTAA

Protein sequence

>Msa1393560

LAPFFLYTHPQFLHWSFSHIPPSNPSSQLHANPNLVPMASTPKKLLQSPSSKSNLRSQFSPLTPHSLPTRRSTRLNSDTPITPNLVAESQIQQSTPRRGRRIGENSVPAAKSRLDFTRKDKAVTHNSSIKVENEIDSALFLKKRSRKAESDEIAFAPKSPDSSKSVKKRKQEGEKTAELKKRNGKGDSLKVSFAPTSPDQSETKKRKRKNEVKVEKTVVTRAGRKGGKIAKVQYYKKVVYDGGEFEVGDDVYVKRREDATSDEEDPEVEECRFCFRSGDEIMIECDSCLGGFHLKCLTPPLKDVPEGDWICGICEGRKMGKDVDFPKPPKGKKLVRTMRQRLQSSDLWAARIESIWKEVDGSYWCRVRWYMIPEETSVGRQPHNLSRELYRTNDLANIEMESVLRHCYVMIPKEYAKASNEGDDVFLCEYEYDIQWHSFKRLADIDDERENSDESDGDEDWNIDKESDSDTDEDVEYDEENIKISQSQPPTSHQLAANLHKGRFFGLQKIGTKRIPEHIRSHKQTNLERAKASLLLASLPKSLPCRNKEMDEITTFIKGAISDNQCLGRCLYIHGVPGTGKTMSVLSVMRSLKSEVDAGNIKPYCFVEINGLKLASPENIYKVIYEALNGHRVGWKEALRLLNERFVEGKKTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFAPYNYQQLQEIISSRLNGIDIFEKQAMEFASRKFSLQVAAISGDARRALEICRRAAEIADYRMKKLASDPDNVAAGKGLVCMADVESAIQEMFQAPHIQVMKNCSRLGKIFLTAMVHELYKTGMGETTFEKLAMTVSCLCGSNGEVFPGHDILLQVGCKLGECRIILCEAGAKHRLQKLQLNFPSDDVAFSLRDCKDLPWLSKYLM*