AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0143320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0143320 MtrunA17_Chr7g0265981 97.804 1457 32 0 1 1457 1 1457 0.0 2959
Msa0143320 MtrunA17_Chr7g0265971 91.434 1471 104 5 1 1457 1 1463 0.0 2757
Msa0143320 MtrunA17_Chr1g0171351 70.147 1427 407 2 50 1457 42 1468 0.0 2160
Msa0143320 MtrunA17_Chr1g0198291 69.798 1437 423 3 27 1457 37 1468 0.0 2149
Msa0143320 MtrunA17_Chr7g0265961 68.104 1461 389 5 1 1457 1 1388 0.0 2068
Msa0143320 MtrunA17_Chr2g0332241 61.787 1455 527 9 5 1457 1 1428 0.0 1879
Msa0143320 MtrunA17_Chr2g0332221 61.581 1455 529 9 5 1457 1 1427 0.0 1877
Msa0143320 MtrunA17_Chr2g0332211 61.153 1457 535 9 5 1457 82 1511 0.0 1868
Msa0143320 MtrunA17_Chr4g0003981 61.655 1450 520 7 16 1457 16 1437 0.0 1857
Msa0143320 MtrunA17_Chr7g0262231 59.413 1466 548 11 24 1457 6 1456 0.0 1827
Msa0143320 MtrunA17_Chr7g0262241 59.694 1439 546 11 43 1457 25 1453 0.0 1818
Msa0143320 MtrunA17_Chr1g0148841 59.196 1468 563 10 5 1457 1 1447 0.0 1809
Msa0143320 MtrunA17_Chr7g0261971 58.625 1455 563 10 27 1457 9 1448 0.0 1786
Msa0143320 MtrunA17_Chr7g0261951 58.522 1461 565 12 24 1457 6 1452 0.0 1785
Msa0143320 MtrunA17_Chr7g0261981 58.754 1445 543 12 24 1457 6 1408 0.0 1784
Msa0143320 MtrunA17_Chr4g0003971 58.913 1453 540 7 5 1457 1 1396 0.0 1761
Msa0143320 MtrunA17_Chr3g0138261 58.836 1443 561 10 28 1457 18 1440 0.0 1749
Msa0143320 MtrunA17_Chr7g0262221 56.844 1483 540 14 24 1457 7 1438 0.0 1744
Msa0143320 MtrunA17_Chr2g0331081 58.183 1442 574 5 42 1457 28 1466 0.0 1724
Msa0143320 MtrunA17_Chr8g0340651 58.471 1452 565 9 43 1457 30 1480 0.0 1719
Msa0143320 MtrunA17_Chr1g0148811 58.712 1429 562 8 38 1457 15 1424 0.0 1716
Msa0143320 MtrunA17_Chr7g0262261 56.892 1422 561 9 50 1457 5 1388 0.0 1674
Msa0143320 MtrunA17_Chr7g0262261 39.394 99 58 2 1360 1457 1527 1624 1.98e-15 82.4
Msa0143320 MtrunA17_Chr7g0262261 44.565 92 47 2 36 127 1422 1509 1.50e-14 79.7
Msa0143320 MtrunA17_Chr4g0062871 57.073 1428 589 8 38 1457 7 1418 0.0 1667
Msa0143320 MtrunA17_Chr4g0004021 62.773 1284 445 8 6 1284 9 1264 0.0 1667
Msa0143320 MtrunA17_Chr4g0004021 23.688 629 412 15 878 1453 166 779 1.90e-33 141
Msa0143320 MtrunA17_Chr7g0262251 56.058 1436 559 9 21 1440 18 1397 0.0 1667
Msa0143320 MtrunA17_Chr0c20g0493841 53.142 1432 641 12 40 1457 16 1431 0.0 1524
Msa0143320 MtrunA17_Chr3g0104621 52.597 1367 591 9 129 1457 1 1348 0.0 1437
Msa0143320 MtrunA17_Chr5g0429871 55.253 1247 528 7 223 1457 17 1245 0.0 1381
Msa0143320 MtrunA17_Chr5g0429871 24.704 591 359 17 181 750 664 1189 7.32e-33 139
Msa0143320 MtrunA17_Chr7g0266001 92.676 669 49 0 127 795 6 674 0.0 1277
Msa0143320 MtrunA17_Chr7g0266001 25.589 637 393 19 878 1453 58 674 1.50e-35 145
Msa0143320 MtrunA17_Chr7g0262321 51.640 1189 502 10 283 1457 2 1131 0.0 1216
Msa0143320 MtrunA17_Chr7g0265991 85.514 642 82 1 827 1457 3 644 0.0 1147
Msa0143320 MtrunA17_Chr7g0265991 25.153 652 390 20 178 795 53 640 1.13e-37 151
Msa0143320 MtrunA17_Chr4g0069211 54.036 1053 443 13 40 1078 16 1041 0.0 1107
Msa0143320 MtrunA17_Chr4g0069211 23.971 680 425 21 832 1453 117 762 1.37e-35 147
Msa0143320 MtrunA17_Chr4g0069211 28.235 255 150 6 181 435 843 1064 4.01e-16 84.3
Msa0143320 MtrunA17_Chr7g0215001 57.713 376 137 1 1031 1384 1 376 4.43e-150 461
Msa0143320 MtrunA17_Chr6g0472481 73.279 247 54 1 871 1105 1 247 2.59e-119 374
Msa0143320 MtrunA17_Chr4g0069221 46.950 377 199 1 1081 1457 1 376 1.12e-117 374
Msa0143320 MtrunA17_Chr7g0238421 51.154 260 86 4 891 1150 12 230 2.14e-69 233
Msa0143320 MtrunA17_Chr7g0266011 89.147 129 14 0 1 129 1 129 1.86e-68 226
Msa0143320 MtrunA17_Chr1g0198931 27.316 637 396 19 796 1387 3 617 1.13e-54 204
Msa0143320 MtrunA17_Chr1g0198931 25.673 557 341 19 183 719 106 609 1.39e-35 145
Msa0143320 MtrunA17_Chr7g0262331 47.887 213 100 5 49 256 2 208 1.61e-54 189
Msa0143320 MtrunA17_Chr1g0213091 24.961 637 403 12 812 1399 52 662 3.65e-54 203
Msa0143320 MtrunA17_Chr1g0213091 20.741 675 427 12 179 791 117 745 9.59e-32 134
Msa0143320 MtrunA17_Chr4g0004001 49.432 176 86 1 1282 1457 16 188 1.92e-52 182
Msa0143320 MtrunA17_Chr1g0176441 26.455 567 358 14 850 1381 143 685 4.84e-52 197
Msa0143320 MtrunA17_Chr1g0176441 26.030 607 367 19 146 719 128 685 5.48e-39 157
Msa0143320 MtrunA17_Chr1g0208391 29.104 536 333 12 883 1394 93 605 5.32e-52 196
Msa0143320 MtrunA17_Chr1g0208391 26.523 558 358 13 184 733 93 606 4.93e-41 163
Msa0143320 MtrunA17_Chr8g0390471 83.838 99 16 0 883 981 5 103 1.39e-51 177
Msa0143320 MtrunA17_Chr2g0316301 28.046 517 355 9 883 1398 73 573 1.63e-51 193
Msa0143320 MtrunA17_Chr2g0316301 22.967 627 392 13 184 791 73 627 1.46e-32 135
Msa0143320 MtrunA17_Chr7g0263351 23.662 710 465 12 814 1452 33 736 5.85e-50 191
Msa0143320 MtrunA17_Chr7g0263351 21.670 563 392 7 184 733 127 653 4.56e-35 144
Msa0143320 MtrunA17_Chr1g0200651 24.818 685 448 12 809 1456 12 666 9.45e-50 189
Msa0143320 MtrunA17_Chr1g0200651 26.455 567 350 17 175 723 78 595 9.83e-35 143
Msa0143320 MtrunA17_Chr8g0359931 27.878 556 358 14 853 1390 34 564 1.84e-49 187
Msa0143320 MtrunA17_Chr8g0359931 25.400 563 343 19 177 723 59 560 5.95e-34 140
Msa0143320 MtrunA17_Chr1g0176451 25.993 554 358 14 856 1381 1 530 2.53e-48 182
Msa0143320 MtrunA17_Chr1g0176451 26.773 564 347 17 174 719 15 530 1.54e-40 159
Msa0143320 MtrunA17_Chr7g0264441 27.273 506 279 14 882 1328 278 753 1.05e-46 182
Msa0143320 MtrunA17_Chr7g0264441 33.574 277 150 6 178 453 273 516 2.46e-31 133
Msa0143320 MtrunA17_Chr5g0429861 44.019 209 97 3 55 249 36 238 2.09e-46 168
Msa0143320 MtrunA17_Chr4g0039261 26.208 683 391 21 829 1457 15 638 1.09e-45 177
Msa0143320 MtrunA17_Chr4g0039261 27.031 640 384 20 183 793 50 635 1.54e-45 176
Msa0143320 MtrunA17_Chr5g0408061 26.810 511 307 16 838 1316 30 505 2.93e-45 174
Msa0143320 MtrunA17_Chr5g0408061 26.049 691 416 24 132 791 8 634 4.13e-41 162
Msa0143320 MtrunA17_Chr4g0039251 26.465 563 353 11 882 1406 92 631 7.73e-45 175
Msa0143320 MtrunA17_Chr4g0039251 26.758 583 360 14 165 728 78 612 7.37e-43 169
Msa0143320 MtrunA17_Chr2g0318061 29.293 396 221 14 854 1220 1 366 8.60e-45 167
Msa0143320 MtrunA17_Chr2g0318061 32.246 276 150 7 181 455 28 267 4.81e-32 129
Msa0143320 MtrunA17_Chr3g0102731 27.112 509 327 10 882 1365 97 586 1.24e-44 172
Msa0143320 MtrunA17_Chr3g0102731 29.225 284 164 7 173 455 87 334 3.66e-27 118
Msa0143320 MtrunA17_Chr1g0199471 27.530 494 289 12 882 1328 516 987 1.96e-44 176
Msa0143320 MtrunA17_Chr1g0199471 32.847 274 148 7 178 449 511 750 2.66e-31 134
Msa0143320 MtrunA17_Chr5g0446901 26.969 508 331 8 883 1365 109 601 2.90e-44 171
Msa0143320 MtrunA17_Chr5g0446901 29.658 263 145 8 184 442 109 335 1.48e-25 114
Msa0143320 MtrunA17_Chr4g0050291 24.799 621 411 11 184 791 50 627 3.20e-44 172
Msa0143320 MtrunA17_Chr4g0050291 26.454 533 341 13 873 1376 40 550 2.01e-43 169
Msa0143320 MtrunA17_Chr4g0050251 26.043 599 390 15 883 1450 73 649 8.95e-44 171
Msa0143320 MtrunA17_Chr4g0050251 24.242 627 425 12 174 791 63 648 2.61e-42 166
Msa0143320 MtrunA17_Chr7g0267971 25.357 560 367 13 850 1377 132 672 1.14e-43 171
Msa0143320 MtrunA17_Chr7g0267971 24.599 561 358 16 181 719 157 674 4.71e-33 138
Msa0143320 MtrunA17_Chr4g0065231 24.458 646 406 17 158 786 49 629 2.08e-43 169
Msa0143320 MtrunA17_Chr4g0065231 26.207 580 377 15 856 1412 44 595 2.81e-42 166
Msa0143320 MtrunA17_Chr8g0390461 55.474 137 53 3 712 846 1 131 1.82e-42 153
Msa0143320 MtrunA17_Chr5g0411621 31.657 338 207 7 852 1177 17 342 9.92e-42 165
Msa0143320 MtrunA17_Chr5g0411621 26.408 284 175 4 179 462 46 295 4.43e-27 119
Msa0143320 MtrunA17_Chr4g0050221 25.000 604 395 16 878 1452 26 600 1.62e-41 163
Msa0143320 MtrunA17_Chr4g0050221 24.850 668 389 25 158 789 11 601 2.61e-33 138
Msa0143320 MtrunA17_Chr4g0028621 27.327 505 289 12 882 1328 506 990 3.96e-41 166
Msa0143320 MtrunA17_Chr4g0028621 32.847 274 148 7 178 449 501 740 2.66e-26 117
Msa0143320 MtrunA17_Chr1g0202431 25.617 527 363 11 883 1404 50 552 1.28e-40 160
Msa0143320 MtrunA17_Chr1g0202431 23.445 627 386 16 184 791 50 601 6.18e-35 142
Msa0143320 MtrunA17_Chr6g0477811 26.101 636 394 19 181 791 62 646 1.33e-40 161
Msa0143320 MtrunA17_Chr6g0477811 25.451 554 337 17 873 1380 59 582 1.26e-37 152
Msa0143320 MtrunA17_Chr8g0384391 25.044 567 383 15 882 1422 55 605 2.23e-40 160
Msa0143320 MtrunA17_Chr8g0384391 21.791 670 426 16 155 793 33 635 1.79e-31 132
Msa0143320 MtrunA17_Chr1g0180971 36.842 228 140 1 880 1107 410 633 1.92e-39 158
Msa0143320 MtrunA17_Chr1g0180971 34.892 278 145 7 178 453 407 650 3.04e-31 132
Msa0143320 MtrunA17_Chr4g0050261 23.310 725 448 18 174 834 63 743 8.57e-39 156
Msa0143320 MtrunA17_Chr4g0050261 23.944 639 394 20 883 1450 73 690 9.03e-37 150
Msa0143320 MtrunA17_Chr8g0393191 30.205 341 197 8 856 1166 43 372 3.27e-38 155
Msa0143320 MtrunA17_Chr8g0393191 23.599 339 214 6 179 517 64 357 1.01e-21 102
Msa0143320 MtrunA17_Chr4g0050201 24.007 554 366 18 925 1452 5 529 2.69e-32 134
Msa0143320 MtrunA17_Chr4g0050201 21.088 588 385 16 223 789 1 530 4.35e-20 96.3
Msa0143320 MtrunA17_Chr3g0130331 21.924 634 417 14 183 793 57 635 3.26e-32 134
Msa0143320 MtrunA17_Chr3g0130331 32.618 233 139 7 866 1091 44 265 2.42e-28 122
Msa0143320 MtrunA17_Chr4g0026731 23.132 562 381 16 925 1445 22 573 1.78e-31 132
Msa0143320 MtrunA17_Chr4g0026731 23.723 607 386 18 217 789 12 575 2.44e-31 131
Msa0143320 MtrunA17_Chr4g0039231 28.664 307 177 8 923 1204 1 290 1.85e-27 120
Msa0143320 MtrunA17_Chr4g0039231 31.513 238 128 5 246 482 20 223 7.29e-26 115
Msa0143320 MtrunA17_Chr8g0390481 85.714 56 7 1 1013 1067 7 62 2.75e-24 97.4
Msa0143320 MtrunA17_Chr8g0390451 68.750 64 20 0 259 322 23 86 4.78e-24 97.8
Msa0143320 MtrunA17_Chr2g0327241 30.736 231 152 6 866 1094 111 335 1.34e-22 105
Msa0143320 MtrunA17_Chr3g0093331 33.862 189 121 4 902 1087 17 204 4.00e-22 97.8
Msa0143320 MtrunA17_Chr3g0093331 27.490 251 147 5 205 453 19 236 1.21e-21 96.3
Msa0143320 MtrunA17_Chr4g0047831 39.024 82 50 0 1000 1081 1 82 1.14e-12 65.5
Msa0143320 MtrunA17_Chr8g0390441 54.386 57 24 1 69 123 1 57 2.20e-12 63.5
Msa0143320 MtrunA17_Chr7g0238411 38.095 84 41 2 620 703 30 102 1.81e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0143320 AT1G66950.1 72.362 1469 379 7 1 1457 1 1454 0.0 2256
Msa0143320 AT2G36380.1 72.727 1452 376 6 11 1457 17 1453 0.0 2236
Msa0143320 AT1G15520.1 60.304 1446 541 10 13 1457 10 1423 0.0 1823
Msa0143320 AT3G16340.1 58.392 1418 560 6 42 1457 27 1416 0.0 1717
Msa0143320 AT3G16340.2 58.110 1418 559 7 42 1457 27 1411 0.0 1702
Msa0143320 AT1G59870.1 58.432 1441 577 7 36 1457 32 1469 0.0 1698
Msa0143320 AT1G15210.1 57.972 1430 572 7 38 1457 32 1442 0.0 1691
Msa0143320 AT2G26910.1 56.543 1429 597 8 38 1457 7 1420 0.0 1657
Msa0143320 AT1G15520.2 61.163 1290 470 9 13 1302 10 1268 0.0 1645
Msa0143320 AT1G15520.2 24.642 629 406 15 878 1453 164 777 9.83e-41 165
Msa0143320 AT2G29940.1 54.558 1426 612 10 43 1457 26 1426 0.0 1584
Msa0143320 AT3G30842.1 51.929 1400 650 7 60 1457 40 1418 0.0 1512
Msa0143320 AT3G53480.1 51.513 1421 654 12 49 1457 53 1450 0.0 1508
Msa0143320 AT2G37280.1 51.023 1417 664 10 49 1457 19 1413 0.0 1499
Msa0143320 AT2G37280.3 50.000 1446 664 11 49 1457 19 1442 0.0 1482
Msa0143320 AT2G37280.2 52.072 1327 607 9 49 1367 19 1324 0.0 1438
Msa0143320 AT2G37280.2 24.127 630 402 19 880 1453 151 760 3.26e-36 150
Msa0143320 AT4G15236.1 48.664 1422 679 12 42 1457 14 1390 0.0 1399
Msa0143320 AT4G15215.9 48.831 1411 681 13 50 1457 22 1394 0.0 1395
Msa0143320 AT4G15215.4 48.831 1411 681 13 50 1457 22 1394 0.0 1395
Msa0143320 AT4G15215.11 48.831 1411 681 13 50 1457 25 1397 0.0 1395
Msa0143320 AT4G15215.5 48.831 1411 681 13 50 1457 22 1394 0.0 1395
Msa0143320 AT4G15215.3 48.831 1411 681 13 50 1457 22 1394 0.0 1395
Msa0143320 AT4G15215.2 48.831 1411 681 13 50 1457 22 1394 0.0 1395
Msa0143320 AT4G15233.1 48.601 1430 681 13 38 1457 7 1392 0.0 1394
Msa0143320 AT4G15230.3 48.031 1422 690 16 43 1457 21 1400 0.0 1393
Msa0143320 AT4G15230.1 48.031 1422 690 16 43 1457 21 1400 0.0 1393
Msa0143320 AT2G37280.4 51.934 1267 587 6 195 1457 7 1255 0.0 1386
Msa0143320 AT4G15215.1 48.476 1411 679 14 50 1457 25 1390 0.0 1377
Msa0143320 AT4G15215.8 48.476 1411 679 14 50 1457 22 1387 0.0 1375
Msa0143320 AT4G15215.10 48.476 1411 679 14 50 1457 22 1387 0.0 1375
Msa0143320 AT4G15215.6 48.476 1411 679 14 50 1457 22 1387 0.0 1375
Msa0143320 AT4G15215.7 48.476 1411 679 14 50 1457 22 1387 0.0 1375
Msa0143320 AT4G15233.8 47.972 1430 681 14 38 1457 7 1383 0.0 1367
Msa0143320 AT4G15233.3 49.054 1374 652 11 88 1457 1 1330 0.0 1364
Msa0143320 AT4G15233.6 49.054 1374 652 11 88 1457 1 1330 0.0 1364
Msa0143320 AT4G15233.7 47.972 1430 672 14 38 1457 7 1374 0.0 1363
Msa0143320 AT4G15230.4 48.895 1358 651 14 105 1457 2 1321 0.0 1359
Msa0143320 AT4G15233.2 48.182 1403 650 13 38 1406 7 1366 0.0 1352
Msa0143320 AT4G15230.2 48.580 1338 639 16 43 1372 21 1317 0.0 1329
Msa0143320 AT4G15230.2 23.892 632 409 21 880 1457 153 766 9.99e-35 145
Msa0143320 AT4G15233.5 48.315 712 333 7 88 795 1 681 0.0 695
Msa0143320 AT4G15233.5 52.014 571 273 1 887 1457 680 1249 0.0 621
Msa0143320 AT4G15233.5 24.558 566 360 12 185 735 677 1190 5.88e-39 159
Msa0143320 AT4G15233.5 24.550 611 405 15 880 1453 90 681 1.34e-36 151
Msa0143320 AT4G15233.4 48.315 712 333 7 88 795 1 681 0.0 695
Msa0143320 AT4G15233.4 52.014 571 273 1 887 1457 680 1249 0.0 621
Msa0143320 AT4G15233.4 24.558 566 360 12 185 735 677 1190 5.88e-39 159
Msa0143320 AT4G15233.4 24.550 611 405 15 880 1453 90 681 1.34e-36 151
Msa0143320 AT2G01320.8 28.008 532 344 8 883 1394 90 602 3.93e-56 208
Msa0143320 AT2G01320.8 28.246 570 353 15 184 743 90 613 3.51e-44 172
Msa0143320 AT2G01320.5 28.008 532 344 8 883 1394 90 602 3.93e-56 208
Msa0143320 AT2G01320.5 28.246 570 353 15 184 743 90 613 3.51e-44 172
Msa0143320 AT2G01320.3 28.008 532 344 8 883 1394 90 602 4.02e-56 209
Msa0143320 AT2G01320.3 28.246 570 353 15 184 743 90 613 4.61e-44 172
Msa0143320 AT2G01320.2 28.008 532 344 8 883 1394 90 602 4.30e-56 209
Msa0143320 AT2G01320.2 28.246 570 353 15 184 743 90 613 4.60e-44 172
Msa0143320 AT2G01320.1 28.008 532 344 8 883 1394 90 602 5.41e-56 209
Msa0143320 AT2G01320.1 28.246 570 353 15 184 743 90 613 6.53e-44 172
Msa0143320 AT2G01320.4 28.008 532 344 8 883 1394 90 602 5.41e-56 209
Msa0143320 AT2G01320.4 28.246 570 353 15 184 743 90 613 6.53e-44 172
Msa0143320 AT3G55090.1 24.538 595 394 9 853 1406 70 650 3.98e-53 201
Msa0143320 AT3G55090.1 22.594 748 460 21 115 791 28 727 3.94e-32 135
Msa0143320 AT4G27420.1 30.233 516 309 18 828 1315 5 497 7.64e-53 197
Msa0143320 AT4G27420.1 27.306 553 340 16 178 719 60 561 5.67e-39 156
Msa0143320 AT3G25620.2 28.497 572 361 15 840 1381 50 603 4.65e-52 196
Msa0143320 AT3G25620.2 25.899 556 341 17 184 719 99 603 8.79e-39 155
Msa0143320 AT2G01320.7 29.797 443 272 8 883 1305 90 513 1.70e-50 188
Msa0143320 AT2G01320.7 29.079 478 285 13 184 652 90 522 4.43e-39 154
Msa0143320 AT2G01320.6 29.797 443 272 8 883 1305 90 513 1.70e-50 188
Msa0143320 AT2G01320.6 29.079 478 285 13 184 652 90 522 4.43e-39 154
Msa0143320 AT3G55130.1 25.812 585 375 14 853 1399 70 633 7.07e-50 190
Msa0143320 AT3G55130.1 23.540 582 366 16 184 735 99 631 3.43e-34 142
Msa0143320 AT3G55110.1 24.783 577 384 13 853 1399 60 616 1.60e-49 189
Msa0143320 AT3G55110.1 23.153 609 394 16 151 735 56 614 1.43e-34 143
Msa0143320 AT2G37360.1 25.258 582 387 9 853 1399 95 663 2.70e-49 189
Msa0143320 AT2G37360.1 22.727 572 375 13 184 733 133 659 4.67e-35 145
Msa0143320 AT5G13580.1 25.554 587 389 11 853 1403 65 639 1.67e-48 186
Msa0143320 AT5G13580.1 21.664 577 398 8 175 735 95 633 5.91e-27 119
Msa0143320 AT5G06530.2 25.536 560 366 11 850 1377 151 691 2.59e-48 186
Msa0143320 AT5G06530.2 25.470 585 357 18 181 731 176 715 2.17e-39 158
Msa0143320 AT5G06530.1 25.536 560 366 11 850 1377 151 691 2.59e-48 186
Msa0143320 AT5G06530.1 25.470 585 357 18 181 731 176 715 2.17e-39 158
Msa0143320 AT3G25620.1 33.518 361 207 9 883 1220 99 449 3.87e-48 180
Msa0143320 AT3G25620.1 35.798 257 128 7 184 439 99 319 3.63e-36 144
Msa0143320 AT1G53270.1 26.627 507 347 10 878 1381 45 529 4.26e-48 182
Msa0143320 AT1G53270.1 23.151 622 374 13 177 782 43 576 1.42e-35 145
Msa0143320 AT3G53510.1 28.113 530 360 8 883 1399 126 647 5.04e-48 185
Msa0143320 AT3G53510.1 22.832 565 378 9 184 735 126 645 1.82e-31 134
Msa0143320 AT1G71960.1 28.310 491 305 12 836 1292 20 497 1.35e-47 182
Msa0143320 AT1G71960.1 25.901 583 349 19 165 723 61 584 8.74e-35 143
Msa0143320 AT5G06530.3 25.547 548 357 11 850 1365 151 679 3.12e-47 182
Msa0143320 AT5G06530.3 25.777 547 339 16 181 703 176 679 1.55e-38 155
Msa0143320 AT3G21090.1 25.816 705 436 20 150 821 9 659 3.99e-47 181
Msa0143320 AT3G21090.1 24.957 577 374 11 882 1421 44 598 1.51e-43 171
Msa0143320 AT2G39350.1 22.766 593 404 6 853 1399 64 648 4.27e-47 182
Msa0143320 AT2G39350.1 22.932 689 429 16 97 735 10 646 2.66e-35 145
Msa0143320 AT1G53390.1 25.919 544 314 15 833 1328 491 993 1.69e-46 183
Msa0143320 AT1G53390.1 27.822 381 217 10 77 453 434 760 1.48e-30 132
Msa0143320 AT3G13220.1 27.115 520 344 13 882 1381 105 609 5.64e-46 178
Msa0143320 AT3G13220.1 29.762 252 140 7 183 433 105 320 4.96e-24 109
Msa0143320 AT3G55100.1 23.037 573 402 8 849 1399 15 570 1.03e-45 177
Msa0143320 AT3G55100.1 23.116 584 390 12 164 735 32 568 2.29e-34 142
Msa0143320 AT3G55100.2 23.037 573 402 8 849 1399 15 570 1.03e-45 177
Msa0143320 AT3G55100.2 23.116 584 390 12 164 735 32 568 2.29e-34 142
Msa0143320 AT1G31770.1 26.869 495 314 15 846 1316 43 513 1.96e-44 172
Msa0143320 AT1G31770.1 26.259 556 342 15 178 719 75 576 8.15e-42 165
Msa0143320 AT2G13610.1 26.610 590 386 17 882 1444 61 630 1.31e-43 170
Msa0143320 AT2G13610.1 21.635 624 415 13 183 786 61 630 2.31e-31 132
Msa0143320 AT5G06530.4 25.895 475 306 10 900 1342 1 461 3.51e-43 166
Msa0143320 AT5G06530.4 25.376 532 320 17 201 703 1 484 5.28e-35 141
Msa0143320 AT2G37010.2 26.477 491 294 11 882 1328 499 966 5.12e-43 172
Msa0143320 AT2G37010.2 31.250 272 153 5 178 448 494 732 2.42e-29 128
Msa0143320 AT2G37010.1 26.477 491 294 11 882 1328 499 966 5.12e-43 172
Msa0143320 AT2G37010.1 31.250 272 153 5 178 448 494 732 2.42e-29 128
Msa0143320 AT1G51500.1 26.102 590 372 13 165 734 29 574 9.05e-43 168
Msa0143320 AT1G51500.1 25.741 540 348 12 882 1389 43 561 6.57e-39 156
Msa0143320 AT4G25750.1 25.528 521 337 16 883 1394 30 508 6.44e-41 160
Msa0143320 AT4G25750.1 24.638 621 373 17 184 791 30 568 3.26e-36 146
Msa0143320 AT5G52860.1 25.581 559 352 17 883 1420 44 559 3.06e-40 159
Msa0143320 AT5G52860.1 24.570 639 384 18 166 791 27 580 4.67e-40 158
Msa0143320 AT1G17840.1 26.344 558 350 15 183 723 68 581 1.43e-39 159
Msa0143320 AT1G17840.1 26.753 542 330 16 882 1380 68 585 4.24e-39 157
Msa0143320 AT5G60740.1 28.231 503 282 15 882 1328 514 993 3.22e-38 156
Msa0143320 AT5G60740.1 32.967 273 149 5 178 449 509 748 1.81e-25 115
Msa0143320 AT5G19410.2 23.654 613 390 15 184 786 75 619 5.49e-38 153
Msa0143320 AT5G19410.2 24.823 564 365 17 883 1425 75 600 2.84e-36 147
Msa0143320 AT5G19410.1 23.654 613 390 15 184 786 66 610 7.98e-38 152
Msa0143320 AT5G19410.1 24.823 564 365 17 883 1425 66 591 3.52e-36 147
Msa0143320 AT1G51460.1 26.316 589 362 16 183 741 29 575 1.93e-37 152
Msa0143320 AT1G51460.1 25.853 557 334 18 882 1389 29 555 3.50e-33 138
Msa0143320 AT2G28070.2 22.840 486 331 14 866 1327 118 583 2.33e-22 104
Msa0143320 AT2G28070.2 21.930 570 394 10 178 736 127 656 1.20e-20 99.4
Msa0143320 AT2G28070.1 22.840 486 331 14 866 1327 118 583 2.33e-22 104
Msa0143320 AT2G28070.1 21.930 570 394 10 178 736 127 656 1.20e-20 99.4

Find 302 sgRNAs with CRISPR-Local

Find 467 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAATTGGGAACTATTTA+AGG 0.090679 1_4:+2231727 Msa0143320:CDS
TACTGTTTGGTCTAATATTT+TGG 0.100628 1_4:+2235242 Msa0143320:CDS
GATTACCCATATGGATTCTT+AGG 0.164021 1_4:+2232032 Msa0143320:CDS
AGGAATTCTTGAAACAAAAT+TGG 0.172704 1_4:+2236387 Msa0143320:CDS
TCAATTCTTGTGTCTGTATT+TGG 0.174535 1_4:-2232885 None:intergenic
TCTCGGGTGCCGGCTGTAAA+AGG 0.212698 1_4:-2231370 None:intergenic
GATGCTCTTGTGGGCCTTCC+AGG 0.227771 1_4:+2234329 Msa0143320:CDS
ACCAGCACAAGCACTCTTTA+TGG 0.229639 1_4:+2231250 Msa0143320:CDS
CATTGATTGCTATGGCATTC+TGG 0.244815 1_4:-2232681 None:intergenic
CGAATGTTGCTTGGTTCTTT+TGG 0.251450 1_4:-2234045 None:intergenic
GTGAAGCATGTTGGTGAAAA+TGG 0.254799 1_4:+2229221 Msa0143320:CDS
TTTGCATTGTAGAGTGTTCT+TGG 0.256053 1_4:+2230048 Msa0143320:intron
ATGAAGGCTATTGCATTATC+AGG 0.268066 1_4:+2230742 Msa0143320:CDS
CGTTGTTGCTGGCATTTCTA+TGG 0.269497 1_4:+2235983 Msa0143320:CDS
GTTGGACCTCGACGAGTTTC+CGG 0.272415 1_4:+2229057 Msa0143320:CDS
GGAAACAACATTTGTCATAT+TGG 0.272722 1_4:+2235167 Msa0143320:CDS
GTATTGTTGTTGATCTTTCT+TGG 0.273892 1_4:-2231543 None:intergenic
CGACAATTCTTGGCATTGTT+TGG 0.275427 1_4:+2232345 Msa0143320:CDS
TCTTCATTGCCTTATGCATT+TGG 0.276718 1_4:+2235552 Msa0143320:CDS
GGATATTTGTGCTGACATTA+TGG 0.293597 1_4:+2231057 Msa0143320:CDS
ACATCAAGCCATGGATGATA+TGG 0.295988 1_4:+2232629 Msa0143320:CDS
CTTCTAGGTCCTCCAGGTTC+TGG 0.298033 1_4:+2230267 Msa0143320:CDS
AGATGGCTCTTTCTTTATTT+CGG 0.300502 1_4:+2232376 Msa0143320:CDS
AAGACAATGAGAAGTTTCTT+AGG 0.300916 1_4:+2229333 Msa0143320:CDS
TTCTTTCATTCATTTCATAT+TGG 0.308280 1_4:+2231620 Msa0143320:CDS
CTAATACTTTACTCCATGAT+TGG 0.308313 1_4:+2235852 Msa0143320:CDS
TGAGTTTGTCTCTTATTATA+AGG 0.319215 1_4:-2231671 None:intergenic
TGAAAGAAATCAACAAATTC+AGG 0.320369 1_4:-2231605 None:intergenic
TGTCTACATAGTAGCTAATA+TGG 0.325392 1_4:-2233589 None:intergenic
GAGACAAATGGTTCACATAA+TGG 0.330112 1_4:+2231328 Msa0143320:CDS
GGAATTCTTGAAACAAAATT+GGG 0.330738 1_4:+2236388 Msa0143320:CDS
ACTAGTTATTGCTAATTCAT+TGG 0.333291 1_4:+2232422 Msa0143320:CDS
CAACCCTTCAATCATCTTCA+TGG 0.334300 1_4:+2234412 Msa0143320:CDS
GCATTCTGGCCATACATTAT+AGG 0.336967 1_4:-2232667 None:intergenic
TTGCTGTTGCTCATTTAGGC+TGG 0.338259 1_4:+2236438 Msa0143320:CDS
TTTATCTCAAGCTACCTTGA+TGG 0.339233 1_4:-2230141 None:intergenic
TATGGTGGAGATGGTACTAT+TGG 0.341651 1_4:+2236264 Msa0143320:CDS
AATCTGAATCTCTCTCTTCT+TGG 0.341898 1_4:-2230091 None:intergenic
GGAAGGCAGCAAACTTCTTA+TGG 0.343888 1_4:+2235883 Msa0143320:CDS
CCATATCGCTGATTCCAAAA+AGG 0.345613 1_4:-2232065 None:intergenic
TTTGCATTCGTGTTTGCATT+TGG 0.350013 1_4:+2236470 Msa0143320:CDS
GCTTGTATACAGAAGATTAT+TGG 0.351744 1_4:+2232946 Msa0143320:CDS
AACATAATCAGTTACGAAAC+TGG 0.351795 1_4:-2230773 None:intergenic
GGCAACAGCAGCGGCCATTC+CGG 0.354979 1_4:+2229091 Msa0143320:CDS
AAACAGTAATCCAATGATTA+TGG 0.356745 1_4:-2235227 None:intergenic
GAAAACTTGATCGTGATTTA+CGG 0.356837 1_4:+2230319 Msa0143320:CDS
GAAGGAAATATCAGCATATC+TGG 0.357176 1_4:+2234019 Msa0143320:CDS
CAAGTTGCTGTTGCTCATTT+AGG 0.358152 1_4:+2236434 Msa0143320:CDS
ATACAGAAGATTATTGGTAT+TGG 0.359125 1_4:+2232952 Msa0143320:CDS
TTGGACCTCGACGAGTTTCC+GGG 0.359814 1_4:+2229058 Msa0143320:CDS
TATATATGTATTATCTTCTC+TGG 0.362799 1_4:-2236511 None:intergenic
TTCAGGATGACACTCCTTCT+AGG 0.365002 1_4:+2230252 Msa0143320:intron
ATAATCATTGGATTACTGTT+TGG 0.370415 1_4:+2235229 Msa0143320:CDS
TACAATGCAAAGCTAACTTC+TGG 0.376519 1_4:+2235146 Msa0143320:CDS
GGGCATTTGGATTACCCATA+TGG 0.377740 1_4:+2232023 Msa0143320:CDS
GAAAAGTCAAGGAATCATTA+AGG 0.379986 1_4:+2233862 Msa0143320:CDS
AAAATATGGTATTTCAAATT+GGG 0.380560 1_4:+2231715 Msa0143320:CDS
GGAACTGAAACATATCTATA+AGG 0.384650 1_4:-2231584 None:intergenic
TAGTACCTCCAAAGTGTTGA+TGG 0.387553 1_4:-2229973 None:intergenic
TTCTTGATGACCATAATCAT+TGG 0.387984 1_4:+2235217 Msa0143320:CDS
GGAAATTGCGGCAGAGCTTA+AGG 0.388812 1_4:+2231646 Msa0143320:CDS
ATAGCTATTGTTGATGAAAA+GGG 0.389338 1_4:+2234644 Msa0143320:intron
ACAAGATTTGCTGAATCTCT+TGG 0.390721 1_4:+2235416 Msa0143320:CDS
GAGGAATCAAGAACTTATAA+AGG 0.394407 1_4:+2235054 Msa0143320:CDS
TTTGATGTGATTAGGCTTCT+GGG 0.395126 1_4:+2230497 Msa0143320:intron
TATAGCTATTGTTGATGAAA+AGG 0.396161 1_4:+2234643 Msa0143320:intron
ATATACAGCAAATTCCTATA+TGG 0.396302 1_4:+2236246 Msa0143320:intron
ATCTGTATTGCAGCCTTGGT+TGG 0.399274 1_4:+2232975 Msa0143320:CDS
CAGATTCTCAAACATGTTAG+TGG 0.402322 1_4:+2230108 Msa0143320:CDS
AATTACAGTGAGAGAGACTT+TGG 0.402877 1_4:+2230609 Msa0143320:CDS
AGAATTGATGCACCAACAAT+TGG 0.403248 1_4:+2232900 Msa0143320:CDS
ACATTGCTTCTAGCACTTGC+AGG 0.406413 1_4:+2230297 Msa0143320:CDS
CTAGTTATTGCTAATTCATT+GGG 0.406591 1_4:+2232423 Msa0143320:CDS
CACAAACTTCAGGCTATCTC+AGG 0.409420 1_4:+2234816 Msa0143320:intron
GGCATGGCTCCGTCTTCCTT+CGG 0.410445 1_4:+2234144 Msa0143320:CDS
ACACCAGACCACGTTGTTGC+TGG 0.411961 1_4:+2235972 Msa0143320:CDS
AGTTCCATGCTTCCAGCTCC+TGG 0.412591 1_4:-2236362 None:intergenic
ACAATAAAGCTTACTGGTAA+AGG 0.413465 1_4:-2234953 None:intergenic
TAGTAAAATGGCATCGGTAT+TGG 0.413614 1_4:+2228995 None:intergenic
TTGGATCTGTATTGCAGCCT+TGG 0.416559 1_4:+2232971 Msa0143320:CDS
GGATGAAATATCAACCGGTT+TGG 0.417208 1_4:+2231271 Msa0143320:CDS
CCATATAGTGTCCATGCAAC+AGG 0.417505 1_4:-2236293 None:intergenic
TCAAGAAGGGAGAGAGAAGC+TGG 0.419774 1_4:+2230688 Msa0143320:CDS
TATACCTGACCAAATGCATA+AGG 0.420178 1_4:-2235561 None:intergenic
CCTGTTGCATGGACACTATA+TGG 0.424271 1_4:+2236293 Msa0143320:CDS
TTGCTAGTGCTATTTGTGCT+TGG 0.425593 1_4:+2232456 Msa0143320:CDS
AAAACTTGATCGTGATTTAC+GGG 0.426718 1_4:+2230320 Msa0143320:CDS
TCTAGACACCATCCCCTTGA+AGG 0.426991 1_4:+2233202 Msa0143320:CDS
AGAAAGATCAACAACAATAC+TGG 0.428448 1_4:+2231546 Msa0143320:CDS
ACAGCACTTGTAGGTGTTAG+TGG 0.428551 1_4:+2233938 Msa0143320:CDS
AAGTACAAGTCCTTCGAATC+TGG 0.430570 1_4:-2235094 None:intergenic
CAAGATTTGCTGAATCTCTT+GGG 0.431064 1_4:+2235417 Msa0143320:CDS
ATTGCCTTATGCATTTGGTC+AGG 0.433114 1_4:+2235557 Msa0143320:CDS
CCATCTTGAACATTTCCAAC+TGG 0.434843 1_4:-2231869 None:intergenic
AGGGATCCTAAGAATCCATA+TGG 0.434877 1_4:-2232038 None:intergenic
ACATGATAAGAAGATCTTGT+TGG 0.438204 1_4:+2229286 Msa0143320:CDS
TTCATGAAAGCATCAATCTC+AGG 0.440852 1_4:-2230724 None:intergenic
ACTCCATGATTGGGTTTGAA+TGG 0.442009 1_4:+2235862 Msa0143320:CDS
ATGGTAACATTAAGTAAAGT+AGG 0.442509 1_4:-2229954 None:intergenic
GTGAGAAATACAGTAGATAC+AGG 0.444040 1_4:+2234488 Msa0143320:CDS
TAATACTTTACTCCATGATT+GGG 0.445203 1_4:+2235853 Msa0143320:CDS
CAATAAAGCTTACTGGTAAA+GGG 0.445706 1_4:-2234952 None:intergenic
GATGTTTGTTGAAGAAGTTA+TGG 0.447553 1_4:+2234280 Msa0143320:intron
ACCCTCATGGATGTATTAGC+TGG 0.449559 1_4:+2233974 Msa0143320:CDS
CAACTACTGCAAGATGTTAG+TGG 0.449707 1_4:+2233893 Msa0143320:CDS
AATTAGTTACTTACCATCCT+AGG 0.450703 1_4:-2236050 None:intergenic
GGAGGTTTCATTGTTGCTAA+AGG 0.452085 1_4:+2232477 Msa0143320:CDS
TGCTGTTGCTCATTTAGGCT+GGG 0.454764 1_4:+2236439 Msa0143320:CDS
CTTGTAGGTGTTAGTGGTGC+TGG 0.454908 1_4:+2233944 Msa0143320:CDS
TCTGTATTGCAGCCTTGGTT+GGG 0.455173 1_4:+2232976 Msa0143320:CDS
ATGCAAGTTTATGAGACAAA+TGG 0.455698 1_4:+2231316 Msa0143320:CDS
CTAGTGCTATTTGTGCTTGG+AGG 0.455815 1_4:+2232459 Msa0143320:CDS
TTATCATGTTAACAGATGCT+TGG 0.456719 1_4:+2231031 Msa0143320:intron
TAATGTTACCATCAACACTT+TGG 0.456743 1_4:+2229965 Msa0143320:CDS
GGTAGAACCATTCCTCTTCT+CGG 0.457725 1_4:-2233539 None:intergenic
CTTGCATATTTGAAAAGTTG+TGG 0.457844 1_4:-2231300 None:intergenic
TATATATCTCCTATAATGTA+TGG 0.458421 1_4:+2232658 Msa0143320:CDS
TTTATGGATGAAATATCAAC+CGG 0.458660 1_4:+2231266 Msa0143320:CDS
AATGACTGTGAATATTTGGT+TGG 0.459953 1_4:-2235118 None:intergenic
ATGCCAGCAACAACGTGGTC+TGG 0.461901 1_4:-2235975 None:intergenic
GTGGGCCTTCCAGGTGTGGA+TGG 0.463456 1_4:+2234338 Msa0143320:CDS
GGTATATTAACAGCACTTGT+AGG 0.465317 1_4:+2233929 Msa0143320:CDS
GGTTTGCTCCTTCTGCTAGC+AGG 0.465736 1_4:+2232113 Msa0143320:CDS
CTGATAAATGTGATGTTCAA+TGG 0.466014 1_4:+2231923 Msa0143320:CDS
CATCAAGCCATGGATGATAT+GGG 0.470233 1_4:+2232630 Msa0143320:CDS
GAAGGTCAAATTGTATATCA+AGG 0.471023 1_4:+2231428 Msa0143320:CDS
TCTCTGGCTTTGTCATTCCT+AGG 0.475448 1_4:+2236033 Msa0143320:CDS
TAGTACCATCTCCACCATAT+AGG 0.476754 1_4:-2236260 None:intergenic
ATCTTCTGTATACAAGCCTC+TGG 0.478039 1_4:-2232940 None:intergenic
ATTGTTTGGCATTCATCAGA+TGG 0.478916 1_4:+2232359 Msa0143320:CDS
AGTTCAAATGTCTCGGGTGC+CGG 0.479354 1_4:-2231380 None:intergenic
ATGGTGGAGATGGTACTATT+GGG 0.479665 1_4:+2236265 Msa0143320:CDS
ACACTCCTTCTAGGTCCTCC+AGG 0.480920 1_4:+2230261 Msa0143320:CDS
GTTCTTGCAATGGAAACAAC+TGG 0.482841 1_4:-2235495 None:intergenic
AATGTCATGCTGACTAATAT+AGG 0.484209 1_4:-2230575 None:intergenic
GCAACATTCGCTCGAATAAG+TGG 0.485350 1_4:+2234058 Msa0143320:CDS
AAAAGTTGGCAACCGCTCAA+TGG 0.489176 1_4:-2229177 None:intergenic
GTCATTGAAAGAGGTTGAAA+CGG 0.492124 1_4:-2233560 None:intergenic
AGCTGGAAGCATGGAACTGA+AGG 0.492245 1_4:+2236367 Msa0143320:CDS
TGGCTTTGTCATTCCTAGGA+TGG 0.493667 1_4:+2236037 Msa0143320:CDS
TAAGAATTCATTGATTGCTA+TGG 0.493875 1_4:-2232689 None:intergenic
CAGAACCTGGAGGACCTAGA+AGG 0.496303 1_4:-2230266 None:intergenic
CATGAAGATGATTGAAGGGT+TGG 0.496965 1_4:-2234411 None:intergenic
TTTCGGTTCGTTGCTGCAGT+TGG 0.498360 1_4:+2232393 Msa0143320:CDS
GTTATATATGCTGGACCTCT+CGG 0.501053 1_4:+2234675 Msa0143320:CDS
AAAGCATCAATCTCAGGGTC+TGG 0.501054 1_4:-2230718 None:intergenic
GATGAAGATGACAAGAAGAA+TGG 0.501556 1_4:+2233169 Msa0143320:CDS
CGTAACTGATTATGTTCTCA+AGG 0.502357 1_4:+2230780 Msa0143320:CDS
TTTCTCATACGCTCAAAAGT+TGG 0.504290 1_4:-2229191 None:intergenic
TTATTCGAGCGAATGTTGCT+TGG 0.505908 1_4:-2234054 None:intergenic
ATTGGGCTTCTCCTGTTGCA+TGG 0.506318 1_4:+2236282 Msa0143320:CDS
ATGTTAACAGATGCTTGGAT+TGG 0.506765 1_4:+2231036 Msa0143320:intron
TGAATCTCTCTCTTCTTGGA+TGG 0.507394 1_4:-2230087 None:intergenic
TGTTACCATCAACACTTTGG+AGG 0.507950 1_4:+2229968 Msa0143320:CDS
CATGATTGGGTTTGAATGGA+AGG 0.511059 1_4:+2235866 Msa0143320:CDS
TTTAGAACAAAGATGCCAGT+TGG 0.512944 1_4:+2231854 Msa0143320:CDS
TGATAAATGTGATGTTCAAT+GGG 0.513427 1_4:+2231924 Msa0143320:CDS
ATGAAGATGACAAGAAGAAT+GGG 0.513641 1_4:+2233170 Msa0143320:CDS
GGAGGACAAGTTATATATGC+TGG 0.514131 1_4:+2234666 Msa0143320:CDS
GTGGAATTGTTAAACCATCA+AGG 0.514216 1_4:+2230127 Msa0143320:CDS
TGATTATGGTCATCAAGAAT+CGG 0.514453 1_4:-2235213 None:intergenic
TCATCCATGAAGATGATTGA+AGG 0.514820 1_4:-2234416 None:intergenic
TCCATAAAGAGTGCTTGTGC+TGG 0.515150 1_4:-2231251 None:intergenic
CCACTTAGAGATGCTCTTGT+GGG 0.516150 1_4:+2234320 Msa0143320:CDS
CAAAAGAAAAGAGTAACAAC+AGG 0.516813 1_4:+2231115 Msa0143320:CDS
AGTTGTGGAACTGTCCAAAC+CGG 0.517915 1_4:-2231285 None:intergenic
CAACAAGCAGTCGTCGGAGT+TGG 0.517972 1_4:+2229039 Msa0143320:CDS
TGTCTTCTTCAACAATCTTG+AGG 0.521323 1_4:-2229316 None:intergenic
ATAAAAGATCGTTCTTGCAA+TGG 0.522088 1_4:-2235505 None:intergenic
ATGATGAATATCACCTCACT+TGG 0.523102 1_4:+2229150 Msa0143320:CDS
TTCATGGATGAACCAACATC+AGG 0.524160 1_4:+2234428 Msa0143320:CDS
TCATCACGATGTCTAGGTGT+TGG 0.524267 1_4:+2230637 Msa0143320:CDS
ATGACTGTGAATATTTGGTT+GGG 0.526168 1_4:-2235117 None:intergenic
CTCGGGTGCCGGCTGTAAAA+GGG 0.526222 1_4:-2231369 None:intergenic
CTTCCATTCAAACCCAATCA+TGG 0.529652 1_4:-2235865 None:intergenic
GTATAGATCCAAACCTTCAA+GGG 0.529725 1_4:-2233215 None:intergenic
TTTAGGTGTCCTGAGAGAAA+AGG 0.530037 1_4:+2231491 Msa0143320:CDS
ACCTCAAGCATCCATGTAGC+CGG 0.531046 1_4:-2234867 None:intergenic
GAAGTTGATGTTGCTAAGCT+TGG 0.531984 1_4:+2229260 Msa0143320:CDS
AAACAAGGAAGGTTATAATC+CGG 0.532857 1_4:+2234848 Msa0143320:CDS
GAAATGAGAAGGGGTATCTC+CGG 0.535139 1_4:+2231088 Msa0143320:CDS
ACCACTTAGAGATGCTCTTG+TGG 0.538301 1_4:+2234319 Msa0143320:CDS
GGTAATCCAAATGCCCATGC+AGG 0.541165 1_4:-2232016 None:intergenic
AGTATAGATCCAAACCTTCA+AGG 0.541726 1_4:-2233216 None:intergenic
AAGTCCTTCGAATCTGGTGC+AGG 0.541825 1_4:-2235088 None:intergenic
CTAGAGTTCTTTGAATACAC+AGG 0.543171 1_4:+2231467 Msa0143320:CDS
TATGAGAATTTATCTGTGGA+AGG 0.544053 1_4:+2229903 Msa0143320:CDS
AAGGTTATAATCCGGCTACA+TGG 0.550081 1_4:+2234856 Msa0143320:CDS
ACCTGTGTTCTACAAACAAA+GGG 0.550242 1_4:+2231979 Msa0143320:CDS
GACATTATTCTACTTTCAGA+AGG 0.551169 1_4:+2231410 Msa0143320:CDS
GAAATAGTGATACCAGGAGC+TGG 0.551466 1_4:+2236350 Msa0143320:CDS
CGACGAGTTTCCGGGACGTA+TGG 0.551776 1_4:+2229066 Msa0143320:CDS
ATTTGTGCTGACATTATGGT+TGG 0.552647 1_4:+2231061 Msa0143320:CDS
ATTATCTTCTCTGGAAGTTG+AGG 0.555968 1_4:-2236502 None:intergenic
TTTCTTTCACTAACGCAGCT+GGG 0.556640 1_4:-2231694 None:intergenic
TACTCCTGCACCAGATTCGA+AGG 0.557852 1_4:+2235084 Msa0143320:CDS
TTAATGCAAGAATGAAGAGA+AGG 0.558421 1_4:-2233016 None:intergenic
TGTTGACAGAACTCTCAAGA+AGG 0.559065 1_4:+2230674 Msa0143320:CDS
AAATTCCTATATGGTGGAGA+TGG 0.559190 1_4:+2236255 Msa0143320:CDS
CATCCATGAAGATGATTGAA+GGG 0.563018 1_4:-2234415 None:intergenic
CCCTCATGGATGTATTAGCT+GGG 0.564136 1_4:+2233975 Msa0143320:CDS
TCACTACGCTCAAACACGTC+CGG 0.564954 1_4:-2229110 None:intergenic
AGGAATGGCTTCTTATGAAG+AGG 0.567730 1_4:+2231762 Msa0143320:CDS
AAAATGGCATCGGTATTGGC+AGG 0.568142 1_4:+2228999 None:intergenic
GGTTGGTGATGAAATGAGAA+GGG 0.569914 1_4:+2231078 Msa0143320:CDS
GTGGAAGGAGATGTGTATGT+TGG 0.571092 1_4:+2229918 Msa0143320:CDS
CTAGCATCGAGGCCTGATGT+TGG 0.571234 1_4:-2234440 None:intergenic
CAATGAACCGAGAAGAGGAA+TGG 0.571584 1_4:+2233532 Msa0143320:CDS
TAATAGCCCCATATCATCCA+TGG 0.574695 1_4:-2232637 None:intergenic
ACTATTTAGTAAAATGGCAT+CGG 0.575368 1_4:+2228989 None:intergenic
GATCCAAACCTTCAAGGGGA+TGG 0.576140 1_4:-2233210 None:intergenic
TGGTTGAATGTCATTGAAAG+AGG 0.576489 1_4:-2233569 None:intergenic
TCCCTTTGTTTGTAGAACAC+AGG 0.576798 1_4:-2231980 None:intergenic
TGAGATTGATGCTTTCATGA+AGG 0.576939 1_4:+2230726 Msa0143320:CDS
AATGGAAACAACTGGTTGCA+CGG 0.580213 1_4:-2235487 None:intergenic
AGGGGATGGTGTCTAGAGGA+TGG 0.581027 1_4:-2233196 None:intergenic
TCGTATTACCTGCTAGCAGA+AGG 0.581108 1_4:-2232121 None:intergenic
TCGAACAATGAACCGAGAAG+AGG 0.581548 1_4:+2233527 Msa0143320:CDS
TCTTGTGGGCCTTCCAGGTG+TGG 0.582192 1_4:+2234334 Msa0143320:CDS
TACCTGTGTTCTACAAACAA+AGG 0.583545 1_4:+2231978 Msa0143320:CDS
CTGTTGCCGTCCATACGTCC+CGG 0.584838 1_4:-2229076 None:intergenic
GATACCAGGAGCTGGAAGCA+TGG 0.585002 1_4:+2236358 Msa0143320:CDS
ACGCTCAAACACGTCCGGAA+TGG 0.585603 1_4:-2229105 None:intergenic
TACAGCAAATTCCTATATGG+TGG 0.585696 1_4:+2236249 Msa0143320:intron
CCAGTTGGAAATGTTCAAGA+TGG 0.586644 1_4:+2231869 Msa0143320:CDS
CAAGATGGACAAAAGTTCCA+TGG 0.587882 1_4:+2231884 Msa0143320:CDS
ATTAAGAACAGGCACCGGCA+TGG 0.589449 1_4:+2233472 Msa0143320:intron
TGTTGAAGAAGTTATGGAGT+TGG 0.589528 1_4:+2234286 Msa0143320:CDS
AGTGTAGGGGAGATGCTAGT+AGG 0.590106 1_4:+2231227 Msa0143320:intron
CATCAGGAAATGAAAAGTCA+AGG 0.590352 1_4:+2233851 Msa0143320:intron
GTTTGTGTCTTAACATCCGA+AGG 0.591405 1_4:-2234160 None:intergenic
GTTGACAGAACTCTCAAGAA+GGG 0.592793 1_4:+2230675 Msa0143320:CDS
AGAGTTTCTCACTTCCATGC+CGG 0.593339 1_4:-2233486 None:intergenic
GAGTTTCCGGGACGTATGGA+CGG 0.594650 1_4:+2229070 Msa0143320:CDS
GAGCAACAGCAACTTGTGGA+AGG 0.597925 1_4:-2236427 None:intergenic
TATCAACAGAACAAAGGAAG+AGG 0.600338 1_4:+2234363 Msa0143320:CDS
GTTGATAGACCATCCACACC+TGG 0.601817 1_4:-2234347 None:intergenic
AAATGTGATGTTCAATGGGA+TGG 0.606208 1_4:+2231928 Msa0143320:CDS
AACTTAGAGATAGACAAGAC+AGG 0.607417 1_4:+2229357 Msa0143320:CDS
TCACTTGGGCAGCCATTGAG+CGG 0.607710 1_4:+2229165 Msa0143320:CDS
TCATTCATTTCATATTGGAG+AGG 0.608375 1_4:+2231625 Msa0143320:CDS
ATCGGTATTGGCAGGTGATG+AGG 0.608696 1_4:+2229007 Msa0143320:CDS
CTGTAAAAGGGAAATGACTA+CGG 0.608791 1_4:-2231357 None:intergenic
GGTCTTATAACCTCGCAGCT+AGG 0.609604 1_4:+2236314 Msa0143320:CDS
AACTCTAGCACGTTCTCACG+CGG 0.609802 1_4:-2231452 None:intergenic
GGGATCCTAAGAATCCATAT+GGG 0.610202 1_4:-2232037 None:intergenic
CCCACAAGAGCATCTCTAAG+TGG 0.610768 1_4:-2234320 None:intergenic
TCATGAAAGCATCAATCTCA+GGG 0.611851 1_4:-2230723 None:intergenic
ATTCTACAAGCTTATATGAG+TGG 0.613124 1_4:-2234701 None:intergenic
TCTTAACATCCGAAGGAAGA+CGG 0.613574 1_4:-2234153 None:intergenic
AACTATCCATGACTGTTGCT+AGG 0.614782 1_4:+2231954 Msa0143320:CDS
GCTCAATGGCTGCCCAAGTG+AGG 0.614988 1_4:-2229163 None:intergenic
GAATTCTTGAAACAAAATTG+GGG 0.622631 1_4:+2236389 Msa0143320:CDS
ATGAATTCTTAGACAAACGA+TGG 0.623172 1_4:+2232701 Msa0143320:CDS
ACAAACTTCAGGCTATCTCA+GGG 0.623701 1_4:+2234817 Msa0143320:intron
TTCAAGGGGATGGTGTCTAG+AGG 0.624898 1_4:-2233200 None:intergenic
TAGCTATTGTTGATGAAAAG+GGG 0.625693 1_4:+2234645 Msa0143320:intron
AAATGAGCAACAGCAACTTG+TGG 0.625986 1_4:-2236431 None:intergenic
TGCTGGAAAGACAACCCTCA+TGG 0.627023 1_4:+2233961 Msa0143320:CDS
CCCAGCTAATACATCCATGA+GGG 0.629426 1_4:-2233975 None:intergenic
GGTCAGCTCAGCAACAATTG+AGG 0.629673 1_4:+2234887 Msa0143320:CDS
AGTACAGAAATAGTGATACC+AGG 0.630325 1_4:+2236344 Msa0143320:CDS
TGGTTGGTGATGAAATGAGA+AGG 0.630513 1_4:+2231077 Msa0143320:CDS
AGGTAGCCTAGCAACAGTCA+TGG 0.632032 1_4:-2231960 None:intergenic
AAAACAGGTGGATACATCGA+AGG 0.632411 1_4:+2234001 Msa0143320:CDS
TAGTGATCGACACACACAAG+AGG 0.633800 1_4:+2229127 Msa0143320:CDS
AAGCACAAATAGCACTAGCA+AGG 0.637360 1_4:-2232454 None:intergenic
TCCGGCTACATGGATGCTTG+AGG 0.641337 1_4:+2234866 Msa0143320:CDS
ATGCAAACACGAATGCAAAG+AGG 0.641377 1_4:-2236466 None:intergenic
TCGTTATGAGAATTTATCTG+TGG 0.642633 1_4:+2229899 Msa0143320:CDS
ATCAAGCCATGGATGATATG+GGG 0.644621 1_4:+2232631 Msa0143320:CDS
CAATATCAACAAGCAGTCGT+CGG 0.646071 1_4:+2229033 Msa0143320:CDS
ACAAGTGCTGTTAATATACC+CGG 0.646545 1_4:-2233926 None:intergenic
AAAGGTGTAGTGAAGCATGT+TGG 0.648595 1_4:+2229212 Msa0143320:CDS
CGTATGGACGGCAACAGCAG+CGG 0.650318 1_4:+2229082 Msa0143320:CDS
TGGTAGAGGACATCAAGCCA+TGG 0.653180 1_4:+2232620 Msa0143320:intron
TGTTAAGACACAAACTCGAA+AGG 0.654758 1_4:+2234168 Msa0143320:CDS
CTACAAGCTTATATGAGTGG+CGG 0.655412 1_4:-2234698 None:intergenic
AGTCAGCATGACATTCACTA+CGG 0.656524 1_4:+2230583 Msa0143320:CDS
TATGGTCATCAAGAATCGGA+CGG 0.660006 1_4:-2235209 None:intergenic
AAATAGCACTAGCAAGGTCA+AGG 0.660087 1_4:-2232448 None:intergenic
ATAGACCATCCACACCTGGA+AGG 0.663568 1_4:-2234343 None:intergenic
TATAGATCCAAACCTTCAAG+GGG 0.665222 1_4:-2233214 None:intergenic
TCCCAGCTAATACATCCATG+AGG 0.666109 1_4:-2233976 None:intergenic
TTATATGAGTGGCGGCCGAG+AGG 0.667665 1_4:-2234690 None:intergenic
ATGAGAAGGGGTATCTCCGG+AGG 0.669640 1_4:+2231091 Msa0143320:CDS
TGATGAATATCACCTCACTT+GGG 0.673946 1_4:+2229151 Msa0143320:CDS
ATGGTCTATCAACAGAACAA+AGG 0.674008 1_4:+2234357 Msa0143320:CDS
TCATATTGGAGAGGAAATTG+CGG 0.675789 1_4:+2231634 Msa0143320:CDS
GAGAAGAGAAAACCCAACCA+AGG 0.676366 1_4:-2232988 None:intergenic
AAAGTACTTCTCAAAGCCAG+AGG 0.677875 1_4:+2232924 Msa0143320:CDS
GTTGGTGATGAAATGAGAAG+GGG 0.679558 1_4:+2231079 Msa0143320:CDS
GATTCATAGACAGTAACATG+TGG 0.683396 1_4:-2234109 None:intergenic
CTATTGTTGATGAAAAGGGG+AGG 0.691074 1_4:+2234648 Msa0143320:CDS
TTGCAGCGGCTCTAGCATCG+AGG 0.699405 1_4:-2234451 None:intergenic
TGAGAAATACAGTAGATACA+GGG 0.699789 1_4:+2234489 Msa0143320:CDS
AGTTCGCATAACGATTGCAG+CGG 0.704195 1_4:-2234465 None:intergenic
TCTGGGAAAATAACTTACTG+CGG 0.705302 1_4:+2230514 Msa0143320:CDS
TACGTCCCGGAAACTCGTCG+AGG 0.733366 1_4:-2229063 None:intergenic
TAGAAATGCCAGCAACAACG+TGG 0.739566 1_4:-2235980 None:intergenic
CAAACTTCAGGCTATCTCAG+GGG 0.747919 1_4:+2234818 Msa0143320:intron
TGATTCAAAAGCAGTCACTG+TGG 0.764192 1_4:+2233147 Msa0143320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGGAAAAAAAAATATTAAAT+TGG - chr1_4:2229734-2229753 None:intergenic 10.0%
!!! AACATTATATTTGTTTTATT+TGG + chr1_4:2230165-2230184 Msa0143320:intron 10.0%
!! CAAAATAAAAAAATGAAAAT+GGG - chr1_4:2230352-2230371 None:intergenic 10.0%
!! ACAAAATAAAAAAATGAAAA+TGG - chr1_4:2230353-2230372 None:intergenic 10.0%
!! AGTAATTATTTAAATAACAT+TGG - chr1_4:2232805-2232824 None:intergenic 10.0%
!!! ATTATTTTTATTGAAAGTTA+TGG - chr1_4:2233351-2233370 None:intergenic 10.0%
!! TTATATATATTTCAAAATAG+AGG + chr1_4:2236091-2236110 Msa0143320:intron 10.0%
!! AATGCAATACAAAATAATAT+AGG + chr1_4:2229847-2229866 Msa0143320:intron 15.0%
!! ATGCAATACAAAATAATATA+GGG + chr1_4:2229848-2229867 Msa0143320:intron 15.0%
!! AGTAATAAAAAACAATGAAA+GGG - chr1_4:2230438-2230457 None:intergenic 15.0%
!! TAGTAATAAAAAACAATGAA+AGG - chr1_4:2230439-2230458 None:intergenic 15.0%
!! TTAACAAAATAGGATAAATT+TGG - chr1_4:2231001-2231020 None:intergenic 15.0%
!! AAAAATATGGTATTTCAAAT+TGG + chr1_4:2231714-2231733 Msa0143320:CDS 15.0%
!! AAAATATGGTATTTCAAATT+GGG + chr1_4:2231715-2231734 Msa0143320:CDS 15.0%
!!! TTCTTACATATTTTACAATT+GGG + chr1_4:2232092-2232111 Msa0143320:CDS 15.0%
!! TTTATCAACTATATATAGAA+AGG + chr1_4:2232151-2232170 Msa0143320:intron 15.0%
!!! ATAATCGAATATTTTTTTCA+TGG + chr1_4:2233081-2233100 Msa0143320:intron 15.0%
!!! ATTTTGGTTTAACATTAAAA+GGG - chr1_4:2233115-2233134 None:intergenic 15.0%
!!! AATTTTGGTTTAACATTAAA+AGG - chr1_4:2233116-2233135 None:intergenic 15.0%
!!! GTTTTCTTTTTACTTTATTT+AGG + chr1_4:2235032-2235051 Msa0143320:intron 15.0%
!!! ATTCAATTTTTCCTTATTAA+TGG + chr1_4:2235305-2235324 Msa0143320:intron 15.0%
!! CTTTAATAAATACAGAAAAA+TGG - chr1_4:2235753-2235772 None:intergenic 15.0%
!!! AGAAAAAGTTGATATAACAA+CGG - chr1_4:2229768-2229787 None:intergenic 20.0%
!! AATACAAAATAATATAGGGT+GGG + chr1_4:2229852-2229871 Msa0143320:intron 20.0%
!!! TATATTTGTTTTATTTGCTG+TGG + chr1_4:2230225-2230244 Msa0143320:intron 20.0%
!!! CTTTATTTTTTGATGTGATT+AGG + chr1_4:2230489-2230508 Msa0143320:intron 20.0%
!! TGGATAAACAACTTAATTAA+GGG - chr1_4:2230981-2231000 None:intergenic 20.0%
!! TTGGATAAACAACTTAATTA+AGG - chr1_4:2230982-2231001 None:intergenic 20.0%
!!! TATCCTATTTTGTTAAAAGT+TGG + chr1_4:2231005-2231024 Msa0143320:intron 20.0%
!!! ATTCCAACTTTTAACAAAAT+AGG - chr1_4:2231011-2231030 None:intergenic 20.0%
!! TTCTTTCATTCATTTCATAT+TGG + chr1_4:2231620-2231639 Msa0143320:CDS 20.0%
!!! GTTCTTACATATTTTACAAT+TGG + chr1_4:2232091-2232110 Msa0143320:CDS 20.0%
!! TTAGCATTTCAGATTATTAT+CGG + chr1_4:2232190-2232209 Msa0143320:intron 20.0%
!!! TTTTCAAATTATTATCGGTT+TGG + chr1_4:2232240-2232259 Msa0143320:intron 20.0%
!! TATATATCTCCTATAATGTA+TGG + chr1_4:2232658-2232677 Msa0143320:CDS 20.0%
!!! CTTTGTTTGTAAGTATATTA+AGG - chr1_4:2232772-2232791 None:intergenic 20.0%
!! ATTATAGCAATCAAAATCAA+AGG - chr1_4:2233066-2233085 None:intergenic 20.0%
!! TTTGATTCATAAACATGTTT+CGG + chr1_4:2233287-2233306 Msa0143320:intron 20.0%
!! TCTTAAATTTGAGTAACTTA+CGG - chr1_4:2233621-2233640 None:intergenic 20.0%
!! TATACTACTTTAAACTCATT+AGG + chr1_4:2233681-2233700 Msa0143320:intron 20.0%
!!! AATTTTTCTTGTTTTTCACT+TGG + chr1_4:2233735-2233754 Msa0143320:intron 20.0%
!!! CTTTTGTTATATGACTTTTA+TGG + chr1_4:2233828-2233847 Msa0143320:intron 20.0%
!!! TTCTTTCTTATTTATTTCCT+TGG + chr1_4:2234578-2234597 Msa0143320:intron 20.0%
!! AATGAAATAATAATCAACCA+AGG - chr1_4:2234598-2234617 None:intergenic 20.0%
!!! TTCTTTTTACTTTATTTAGG+AGG + chr1_4:2235035-2235054 Msa0143320:intron 20.0%
!! AAAAAATGACTGTGAATATT+TGG - chr1_4:2235125-2235144 None:intergenic 20.0%
!!! CGAATTTTGTTTTAATAGTA+CGG - chr1_4:2235699-2235718 None:intergenic 20.0%
!!! TTTATCTACTTCACATTTTA+CGG + chr1_4:2235930-2235949 Msa0143320:CDS 20.0%
!! TATATATGTATTATCTTCTC+TGG - chr1_4:2236514-2236533 None:intergenic 20.0%
! CTCTTTATCTTTACTAGATT+TGG + chr1_4:2229385-2229404 Msa0143320:intron 25.0%
!!! TTTTCAAGCAATGATTATCA+TGG - chr1_4:2229620-2229639 None:intergenic 25.0%
! CAATACAAAATAATATAGGG+TGG + chr1_4:2229851-2229870 Msa0143320:intron 25.0%
! ATACAAAATAATATAGGGTG+GGG + chr1_4:2229853-2229872 Msa0143320:intron 25.0%
!! TCATAACGAACTTCAATTTT+TGG - chr1_4:2229888-2229907 None:intergenic 25.0%
! ATGGTAACATTAAGTAAAGT+AGG - chr1_4:2229957-2229976 None:intergenic 25.0%
! CAAACTAATAATACTCTCAA+AGG - chr1_4:2230011-2230030 None:intergenic 25.0%
! TTTATGGATGAAATATCAAC+CGG + chr1_4:2231266-2231285 Msa0143320:CDS 25.0%
! TGAAAGAAATCAACAAATTC+AGG - chr1_4:2231608-2231627 None:intergenic 25.0%
! TGAGTTTGTCTCTTATTATA+AGG - chr1_4:2231674-2231693 None:intergenic 25.0%
! TTCAAATTGGGAACTATTTA+AGG + chr1_4:2231727-2231746 Msa0143320:CDS 25.0%
!!! ATTTAAGGCATGTTTTTCAA+AGG + chr1_4:2231742-2231761 Msa0143320:CDS 25.0%
! TGATAAATGTGATGTTCAAT+GGG + chr1_4:2231924-2231943 Msa0143320:CDS 25.0%
! ACTAGTTATTGCTAATTCAT+TGG + chr1_4:2232422-2232441 Msa0143320:CDS 25.0%
! CTAGTTATTGCTAATTCATT+GGG + chr1_4:2232423-2232442 Msa0143320:CDS 25.0%
!! CAACGTAATTTCTTTTATTC+TGG + chr1_4:2232600-2232619 Msa0143320:intron 25.0%
!! AATTTCTTTTATTCTGGTAG+AGG + chr1_4:2232606-2232625 Msa0143320:intron 25.0%
!! TAAGAATTCATTGATTGCTA+TGG - chr1_4:2232692-2232711 None:intergenic 25.0%
! ATACAGAAGATTATTGGTAT+TGG + chr1_4:2232952-2232971 Msa0143320:CDS 25.0%
!!! ATCGAATATTTTTTTCATGG+TGG + chr1_4:2233084-2233103 Msa0143320:intron 25.0%
!!! AACTATTTCTGATTAAGAAC+AGG + chr1_4:2233461-2233480 Msa0143320:intron 25.0%
!! CTATGAATCACTATTGTTTT+CGG + chr1_4:2234123-2234142 Msa0143320:CDS 25.0%
! TATTGAAAAAGAATAGAGTC+AGG - chr1_4:2234223-2234242 None:intergenic 25.0%
!! TATAGCTATTGTTGATGAAA+AGG + chr1_4:2234643-2234662 Msa0143320:intron 25.0%
!! ATAGCTATTGTTGATGAAAA+GGG + chr1_4:2234644-2234663 Msa0143320:intron 25.0%
! TCTAATAAAGACTTCAAAGA+TGG - chr1_4:2234771-2234790 None:intergenic 25.0%
! ATTTATTCTACACAAACTTC+AGG + chr1_4:2234806-2234825 Msa0143320:intron 25.0%
! TTTATTGTGTTGTAACTAGT+TGG + chr1_4:2234968-2234987 Msa0143320:intron 25.0%
! AAACAGTAATCCAATGATTA+TGG - chr1_4:2235230-2235249 None:intergenic 25.0%
! ATAATCATTGGATTACTGTT+TGG + chr1_4:2235229-2235248 Msa0143320:CDS 25.0%
!! TACTGTTTGGTCTAATATTT+TGG + chr1_4:2235242-2235261 Msa0143320:CDS 25.0%
!! TTTTCCTTATTAATGGTGTT+TGG + chr1_4:2235312-2235331 Msa0143320:intron 25.0%
! AATACCAAACACCATTAATA+AGG - chr1_4:2235319-2235338 None:intergenic 25.0%
! AACATAGTGAAAACATAGTA+CGG - chr1_4:2235637-2235656 None:intergenic 25.0%
!!! AAGTTTTTAAAGATTTGTGC+TGG + chr1_4:2235659-2235678 Msa0143320:intron 25.0%
! TAATACTTTACTCCATGATT+GGG + chr1_4:2235853-2235872 Msa0143320:CDS 25.0%
! ATATACAGCAAATTCCTATA+TGG + chr1_4:2236246-2236265 Msa0143320:intron 25.0%
! AGGAATTCTTGAAACAAAAT+TGG + chr1_4:2236387-2236406 Msa0143320:CDS 25.0%
! GGAATTCTTGAAACAAAATT+GGG + chr1_4:2236388-2236407 Msa0143320:CDS 25.0%
! GAATTCTTGAAACAAAATTG+GGG + chr1_4:2236389-2236408 Msa0143320:CDS 25.0%
ACATGATAAGAAGATCTTGT+TGG + chr1_4:2229286-2229305 Msa0143320:CDS 30.0%
AAGACAATGAGAAGTTTCTT+AGG + chr1_4:2229333-2229352 Msa0143320:CDS 30.0%
AAAATCCAACAACTAACTTG+CGG - chr1_4:2229434-2229453 None:intergenic 30.0%
ATTAAATTGGCCACGAAATT+TGG - chr1_4:2229721-2229740 None:intergenic 30.0%
TAACAACGGATATTAGAAAC+AGG - chr1_4:2229754-2229773 None:intergenic 30.0%
TCGTTATGAGAATTTATCTG+TGG + chr1_4:2229899-2229918 Msa0143320:CDS 30.0%
TATGAGAATTTATCTGTGGA+AGG + chr1_4:2229903-2229922 Msa0143320:CDS 30.0%
TAATGTTACCATCAACACTT+TGG + chr1_4:2229965-2229984 Msa0143320:CDS 30.0%
!! TTATTTGCTGTGGTAATTTC+AGG + chr1_4:2230235-2230254 Msa0143320:intron 30.0%
GAAAACTTGATCGTGATTTA+CGG + chr1_4:2230319-2230338 Msa0143320:CDS 30.0%
AAAACTTGATCGTGATTTAC+GGG + chr1_4:2230320-2230339 Msa0143320:CDS 30.0%
! AATGTCATGCTGACTAATAT+AGG - chr1_4:2230578-2230597 None:intergenic 30.0%
AACATAATCAGTTACGAAAC+TGG - chr1_4:2230776-2230795 None:intergenic 30.0%
TTATCATGTTAACAGATGCT+TGG + chr1_4:2231031-2231050 Msa0143320:intron 30.0%
CAAAAGAAAAGAGTAACAAC+AGG + chr1_4:2231115-2231134 Msa0143320:CDS 30.0%
!! TTTTTGTTGTAACTGAGTGT+AGG + chr1_4:2231212-2231231 Msa0143320:intron 30.0%
!! TTTTGTTGTAACTGAGTGTA+GGG + chr1_4:2231213-2231232 Msa0143320:intron 30.0%
CTTGCATATTTGAAAAGTTG+TGG - chr1_4:2231303-2231322 None:intergenic 30.0%
ATGCAAGTTTATGAGACAAA+TGG + chr1_4:2231316-2231335 Msa0143320:CDS 30.0%
TCAAAAAGTTCAAATGTCTC+GGG - chr1_4:2231389-2231408 None:intergenic 30.0%
GTCAAAAAGTTCAAATGTCT+CGG - chr1_4:2231390-2231409 None:intergenic 30.0%
GACATTATTCTACTTTCAGA+AGG + chr1_4:2231410-2231429 Msa0143320:CDS 30.0%
GAAGGTCAAATTGTATATCA+AGG + chr1_4:2231428-2231447 Msa0143320:CDS 30.0%
! TCTTTGAATACACAGGTTTT+AGG + chr1_4:2231474-2231493 Msa0143320:CDS 30.0%
! GTATTGTTGTTGATCTTTCT+TGG - chr1_4:2231546-2231565 None:intergenic 30.0%
AGAAAGATCAACAACAATAC+TGG + chr1_4:2231546-2231565 Msa0143320:CDS 30.0%
GGAACTGAAACATATCTATA+AGG - chr1_4:2231587-2231606 None:intergenic 30.0%
TCATTCATTTCATATTGGAG+AGG + chr1_4:2231625-2231644 Msa0143320:CDS 30.0%
GCGTTAGTGAAAGAAAAATA+TGG + chr1_4:2231701-2231720 Msa0143320:CDS 30.0%
GTGTAAAAAATAATGCACCA+TGG - chr1_4:2231904-2231923 None:intergenic 30.0%
CTGATAAATGTGATGTTCAA+TGG + chr1_4:2231923-2231942 Msa0143320:CDS 30.0%
!!! ATTTCTTGTTTTATCCTGCA+TGG + chr1_4:2232002-2232021 Msa0143320:CDS 30.0%
!!! TTTCTTGTTTTATCCTGCAT+GGG + chr1_4:2232003-2232022 Msa0143320:CDS 30.0%
!!! CAGATTTTTTCGACAATTCT+TGG + chr1_4:2232335-2232354 Msa0143320:intron 30.0%
! AGATGGCTCTTTCTTTATTT+CGG + chr1_4:2232376-2232395 Msa0143320:CDS 30.0%
ATGAATTCTTAGACAAACGA+TGG + chr1_4:2232701-2232720 Msa0143320:CDS 30.0%
AGGCAGAAACAAACAAAAAT+GGG - chr1_4:2232752-2232771 None:intergenic 30.0%
AAGGCAGAAACAAACAAAAA+TGG - chr1_4:2232753-2232772 None:intergenic 30.0%
GGCTGCAAAAGATTAAAAAA+GGG - chr1_4:2232867-2232886 None:intergenic 30.0%
TGGCTGCAAAAGATTAAAAA+AGG - chr1_4:2232868-2232887 None:intergenic 30.0%
TCAATTCTTGTGTCTGTATT+TGG - chr1_4:2232888-2232907 None:intergenic 30.0%
!!! AGAAGTACTTTTCCAATTGT+TGG - chr1_4:2232915-2232934 None:intergenic 30.0%
GCTTGTATACAGAAGATTAT+TGG + chr1_4:2232946-2232965 Msa0143320:CDS 30.0%
TTAATGCAAGAATGAAGAGA+AGG - chr1_4:2233019-2233038 None:intergenic 30.0%
TTAAACCAAAATTTCAGCGT+TGG + chr1_4:2233123-2233142 Msa0143320:intron 30.0%
TAAACCAAAATTTCAGCGTT+GGG + chr1_4:2233124-2233143 Msa0143320:intron 30.0%
ATGAAGATGACAAGAAGAAT+GGG + chr1_4:2233170-2233189 Msa0143320:CDS 30.0%
! TATATTTCTGCCTTACTTCT+TGG + chr1_4:2233241-2233260 Msa0143320:intron 30.0%
ATTAGAATCACCAAGAAGTA+AGG - chr1_4:2233254-2233273 None:intergenic 30.0%
AGCAGTGTTAAATGAAGTAT+TGG - chr1_4:2233441-2233460 None:intergenic 30.0%
TGTCTACATAGTAGCTAATA+TGG - chr1_4:2233592-2233611 None:intergenic 30.0%
! TATATGACTTTTATGGCATC+AGG + chr1_4:2233835-2233854 Msa0143320:intron 30.0%
GAAAAGTCAAGGAATCATTA+AGG + chr1_4:2233862-2233881 Msa0143320:CDS 30.0%
! GATGTTTGTTGAAGAAGTTA+TGG + chr1_4:2234280-2234299 Msa0143320:intron 30.0%
TGAGAAATACAGTAGATACA+GGG + chr1_4:2234489-2234508 Msa0143320:CDS 30.0%
GCTTCAAAAATGTCTATACT+TGG - chr1_4:2234542-2234561 None:intergenic 30.0%
!!! CATTTTTGAAGCTTTTGATG+AGG + chr1_4:2234550-2234569 Msa0143320:CDS 30.0%
! TAGCTATTGTTGATGAAAAG+GGG + chr1_4:2234645-2234664 Msa0143320:intron 30.0%
ATTCTACAAGCTTATATGAG+TGG - chr1_4:2234704-2234723 None:intergenic 30.0%
AAACAAGGAAGGTTATAATC+CGG + chr1_4:2234848-2234867 Msa0143320:CDS 30.0%
CAATAAAGCTTACTGGTAAA+GGG - chr1_4:2234955-2234974 None:intergenic 30.0%
ACAATAAAGCTTACTGGTAA+AGG - chr1_4:2234956-2234975 None:intergenic 30.0%
TACAACACAATAAAGCTTAC+TGG - chr1_4:2234962-2234981 None:intergenic 30.0%
GAGGAATCAAGAACTTATAA+AGG + chr1_4:2235054-2235073 Msa0143320:CDS 30.0%
ATGACTGTGAATATTTGGTT+GGG - chr1_4:2235120-2235139 None:intergenic 30.0%
AATGACTGTGAATATTTGGT+TGG - chr1_4:2235121-2235140 None:intergenic 30.0%
GGAAACAACATTTGTCATAT+TGG + chr1_4:2235167-2235186 Msa0143320:CDS 30.0%
TGATTATGGTCATCAAGAAT+CGG - chr1_4:2235216-2235235 None:intergenic 30.0%
! TTCTTGATGACCATAATCAT+TGG + chr1_4:2235217-2235236 Msa0143320:CDS 30.0%
! TTTTATGACTCACGTCTTTT+TGG - chr1_4:2235275-2235294 None:intergenic 30.0%
ATAAAAGATCGTTCTTGCAA+TGG - chr1_4:2235508-2235527 None:intergenic 30.0%
! TTGCAAGAACGATCTTTTAT+CGG + chr1_4:2235508-2235527 Msa0143320:CDS 30.0%
CATTTGGTCAGGTATAAAAA+AGG + chr1_4:2235568-2235587 Msa0143320:intron 30.0%
AGTAATCCATAGATTTGTGT+TGG + chr1_4:2235594-2235613 Msa0143320:intron 30.0%
AAGTATCCAACACAAATCTA+TGG - chr1_4:2235603-2235622 None:intergenic 30.0%
ACAGAAAAATGGAATTCGTT+AGG - chr1_4:2235742-2235761 None:intergenic 30.0%
CTAATACTTTACTCCATGAT+TGG + chr1_4:2235852-2235871 Msa0143320:CDS 30.0%
GTTCCAAAAACTCAAAAAGA+AGG - chr1_4:2236009-2236028 None:intergenic 30.0%
AATTAGTTACTTACCATCCT+AGG - chr1_4:2236053-2236072 None:intergenic 30.0%
ATGATGAATATCACCTCACT+TGG + chr1_4:2229150-2229169 Msa0143320:CDS 35.0%
TGATGAATATCACCTCACTT+GGG + chr1_4:2229151-2229170 Msa0143320:CDS 35.0%
TTTCTCATACGCTCAAAAGT+TGG - chr1_4:2229194-2229213 None:intergenic 35.0%
! ACTTTTGAGCGTATGAGAAA+AGG + chr1_4:2229194-2229213 Msa0143320:CDS 35.0%
TGTCTTCTTCAACAATCTTG+AGG - chr1_4:2229319-2229338 None:intergenic 35.0%
AACTTAGAGATAGACAAGAC+AGG + chr1_4:2229357-2229376 Msa0143320:CDS 35.0%
TATATCAAACAACCAACCAG+TGG + chr1_4:2229453-2229472 Msa0143320:intron 35.0%
TTGACGAACCACAACATATA+TGG - chr1_4:2229488-2229507 None:intergenic 35.0%
!! TCCAAGGGCTAATTACTTTT+TGG + chr1_4:2229532-2229551 Msa0143320:intron 35.0%
TCCAAAAAGTAATTAGCCCT+TGG - chr1_4:2229536-2229555 None:intergenic 35.0%
!!! AGGGCTAATTACTTTTTGGA+TGG + chr1_4:2229536-2229555 Msa0143320:intron 35.0%
!!! GGGCTAATTACTTTTTGGAT+GGG + chr1_4:2229537-2229556 Msa0143320:intron 35.0%
ATGATAATAGATCATCGACC+TGG - chr1_4:2229579-2229598 None:intergenic 35.0%
! TTTGCATTGTAGAGTGTTCT+TGG + chr1_4:2230048-2230067 Msa0143320:intron 35.0%
AATCTGAATCTCTCTCTTCT+TGG - chr1_4:2230094-2230113 None:intergenic 35.0%
CAGATTCTCAAACATGTTAG+TGG + chr1_4:2230108-2230127 Msa0143320:CDS 35.0%
GTGGAATTGTTAAACCATCA+AGG + chr1_4:2230127-2230146 Msa0143320:CDS 35.0%
TTTATCTCAAGCTACCTTGA+TGG - chr1_4:2230144-2230163 None:intergenic 35.0%
!!! AATGTTGTTTTTCCAGAACC+TGG - chr1_4:2230282-2230301 None:intergenic 35.0%
! TTTTGATGTGATTAGGCTTC+TGG + chr1_4:2230496-2230515 Msa0143320:intron 35.0%
TTTGATGTGATTAGGCTTCT+GGG + chr1_4:2230497-2230516 Msa0143320:intron 35.0%
TCTGGGAAAATAACTTACTG+CGG + chr1_4:2230514-2230533 Msa0143320:CDS 35.0%
AATTACAGTGAGAGAGACTT+TGG + chr1_4:2230609-2230628 Msa0143320:CDS 35.0%
! GATTTTTCATCACGATGTCT+AGG + chr1_4:2230631-2230650 Msa0143320:CDS 35.0%
!! TCATGAAAGCATCAATCTCA+GGG - chr1_4:2230726-2230745 None:intergenic 35.0%
!! TTCATGAAAGCATCAATCTC+AGG - chr1_4:2230727-2230746 None:intergenic 35.0%
TGAGATTGATGCTTTCATGA+AGG + chr1_4:2230726-2230745 Msa0143320:CDS 35.0%
ATGAAGGCTATTGCATTATC+AGG + chr1_4:2230742-2230761 Msa0143320:CDS 35.0%
!!! CAGTTACGAAACTGGTTTTT+TGG - chr1_4:2230768-2230787 None:intergenic 35.0%
CGTAACTGATTATGTTCTCA+AGG + chr1_4:2230780-2230799 Msa0143320:CDS 35.0%
ATAGTTCCATACAAACATGC+TGG - chr1_4:2230827-2230846 None:intergenic 35.0%
ATGTTAACAGATGCTTGGAT+TGG + chr1_4:2231036-2231055 Msa0143320:intron 35.0%
! GGATATTTGTGCTGACATTA+TGG + chr1_4:2231057-2231076 Msa0143320:CDS 35.0%
! ATTTGTGCTGACATTATGGT+TGG + chr1_4:2231061-2231080 Msa0143320:CDS 35.0%
! TACTCTTTTCTTTTGTCCTC+CGG - chr1_4:2231110-2231129 None:intergenic 35.0%
TTCATAAAGAATGCTTGTGC+TGG - chr1_4:2231161-2231180 None:intergenic 35.0%
! TTTGTTGTAACTGAGTGTAG+GGG + chr1_4:2231214-2231233 Msa0143320:intron 35.0%
GAGACAAATGGTTCACATAA+TGG + chr1_4:2231328-2231347 Msa0143320:CDS 35.0%
CTGTAAAAGGGAAATGACTA+CGG - chr1_4:2231360-2231379 None:intergenic 35.0%
CTAGAGTTCTTTGAATACAC+AGG + chr1_4:2231467-2231486 Msa0143320:CDS 35.0%
TCATATTGGAGAGGAAATTG+CGG + chr1_4:2231634-2231653 Msa0143320:CDS 35.0%
!! AGGCATGTTTTTCAAAGGAA+TGG + chr1_4:2231747-2231766 Msa0143320:CDS 35.0%
! TTTAGAACAAAGATGCCAGT+TGG + chr1_4:2231854-2231873 Msa0143320:CDS 35.0%
AAATGTGATGTTCAATGGGA+TGG + chr1_4:2231928-2231947 Msa0143320:CDS 35.0%
TACCTGTGTTCTACAAACAA+AGG + chr1_4:2231978-2231997 Msa0143320:CDS 35.0%
ACCTGTGTTCTACAAACAAA+GGG + chr1_4:2231979-2231998 Msa0143320:CDS 35.0%
GATTACCCATATGGATTCTT+AGG + chr1_4:2232032-2232051 Msa0143320:CDS 35.0%
CTGATTCCAAAAAGGAAAGA+GGG - chr1_4:2232060-2232079 None:intergenic 35.0%
ATTGTTTGGCATTCATCAGA+TGG + chr1_4:2232359-2232378 Msa0143320:CDS 35.0%
AGAATTGATGCACCAACAAT+TGG + chr1_4:2232900-2232919 Msa0143320:CDS 35.0%
GATGAAGATGACAAGAAGAA+TGG + chr1_4:2233169-2233188 Msa0143320:CDS 35.0%
TATAGATCCAAACCTTCAAG+GGG - chr1_4:2233217-2233236 None:intergenic 35.0%
GTATAGATCCAAACCTTCAA+GGG - chr1_4:2233218-2233237 None:intergenic 35.0%
AGTATAGATCCAAACCTTCA+AGG - chr1_4:2233219-2233238 None:intergenic 35.0%
! ATGGAGCACTCAAATCTATT+TGG - chr1_4:2233332-2233351 None:intergenic 35.0%
GTCATTGAAAGAGGTTGAAA+CGG - chr1_4:2233563-2233582 None:intergenic 35.0%
TGGTTGAATGTCATTGAAAG+AGG - chr1_4:2233572-2233591 None:intergenic 35.0%
AAATTTGAGTAACTTACGGC+TGG - chr1_4:2233617-2233636 None:intergenic 35.0%
CATCAGGAAATGAAAAGTCA+AGG + chr1_4:2233851-2233870 Msa0143320:intron 35.0%
! ACAAGTGCTGTTAATATACC+CGG - chr1_4:2233929-2233948 None:intergenic 35.0%
GGTATATTAACAGCACTTGT+AGG + chr1_4:2233929-2233948 Msa0143320:CDS 35.0%
GAAGGAAATATCAGCATATC+TGG + chr1_4:2234019-2234038 Msa0143320:CDS 35.0%
GATTCATAGACAGTAACATG+TGG - chr1_4:2234112-2234131 None:intergenic 35.0%
! AATCACTATTGTTTTCGGCA+TGG + chr1_4:2234128-2234147 Msa0143320:CDS 35.0%
TGTTAAGACACAAACTCGAA+AGG + chr1_4:2234168-2234187 Msa0143320:CDS 35.0%
TGTTGAAGAAGTTATGGAGT+TGG + chr1_4:2234286-2234305 Msa0143320:CDS 35.0%
ATGGTCTATCAACAGAACAA+AGG + chr1_4:2234357-2234376 Msa0143320:CDS 35.0%
TATCAACAGAACAAAGGAAG+AGG + chr1_4:2234363-2234382 Msa0143320:CDS 35.0%
CATCCATGAAGATGATTGAA+GGG - chr1_4:2234418-2234437 None:intergenic 35.0%
TCATCCATGAAGATGATTGA+AGG - chr1_4:2234419-2234438 None:intergenic 35.0%
GTGAGAAATACAGTAGATAC+AGG + chr1_4:2234488-2234507 Msa0143320:CDS 35.0%
TACAATGCAAAGCTAACTTC+TGG + chr1_4:2235146-2235165 Msa0143320:CDS 35.0%
!! CAAATCTTGTTGTGTTTTGC+TGG - chr1_4:2235406-2235425 None:intergenic 35.0%
!! ACAAGATTTGCTGAATCTCT+TGG + chr1_4:2235416-2235435 Msa0143320:CDS 35.0%
!! CAAGATTTGCTGAATCTCTT+GGG + chr1_4:2235417-2235436 Msa0143320:CDS 35.0%
! TGCAAGAACGATCTTTTATC+GGG + chr1_4:2235509-2235528 Msa0143320:CDS 35.0%
TCTTCATTGCCTTATGCATT+TGG + chr1_4:2235552-2235571 Msa0143320:CDS 35.0%
TATACCTGACCAAATGCATA+AGG - chr1_4:2235564-2235583 None:intergenic 35.0%
AAGTACTTGATTGACAATGC+AGG + chr1_4:2235782-2235801 Msa0143320:intron 35.0%
!!! TGGCCTTCTTTTTGAGTTTT+TGG + chr1_4:2236003-2236022 Msa0143320:CDS 35.0%
!!! AGTTTTTGGAACTTGTTCTC+TGG + chr1_4:2236017-2236036 Msa0143320:CDS 35.0%
TACAGCAAATTCCTATATGG+TGG + chr1_4:2236249-2236268 Msa0143320:intron 35.0%
! AAATTCCTATATGGTGGAGA+TGG + chr1_4:2236255-2236274 Msa0143320:CDS 35.0%
AGTACAGAAATAGTGATACC+AGG + chr1_4:2236344-2236363 Msa0143320:CDS 35.0%
TTTGCATTCGTGTTTGCATT+TGG + chr1_4:2236470-2236489 Msa0143320:CDS 35.0%
! ATTATCTTCTCTGGAAGTTG+AGG - chr1_4:2236505-2236524 None:intergenic 35.0%
CAATATCAACAAGCAGTCGT+CGG + chr1_4:2229033-2229052 Msa0143320:CDS 40.0%
! AAAGGTGTAGTGAAGCATGT+TGG + chr1_4:2229212-2229231 Msa0143320:CDS 40.0%
! GTGAAGCATGTTGGTGAAAA+TGG + chr1_4:2229221-2229240 Msa0143320:CDS 40.0%
!! GAAGTTGATGTTGCTAAGCT+TGG + chr1_4:2229260-2229279 Msa0143320:CDS 40.0%
GTTAGAGATGCCAAATTTCG+TGG + chr1_4:2229708-2229727 Msa0143320:intron 40.0%
TGTTACCATCAACACTTTGG+AGG + chr1_4:2229968-2229987 Msa0143320:CDS 40.0%
!! TAGTACCTCCAAAGTGTTGA+TGG - chr1_4:2229976-2229995 None:intergenic 40.0%
TGAATCTCTCTCTTCTTGGA+TGG - chr1_4:2230090-2230109 None:intergenic 40.0%
AGTCAGCATGACATTCACTA+CGG + chr1_4:2230583-2230602 Msa0143320:CDS 40.0%
TGTTGACAGAACTCTCAAGA+AGG + chr1_4:2230674-2230693 Msa0143320:CDS 40.0%
GTTGACAGAACTCTCAAGAA+GGG + chr1_4:2230675-2230694 Msa0143320:CDS 40.0%
TACAAACATGCTGGAGATAG+AGG - chr1_4:2230818-2230837 None:intergenic 40.0%
CTATCTCCAGCATGTTTGTA+TGG + chr1_4:2230818-2230837 Msa0143320:intron 40.0%
!! TGGTTGGTGATGAAATGAGA+AGG + chr1_4:2231077-2231096 Msa0143320:CDS 40.0%
!! GGTTGGTGATGAAATGAGAA+GGG + chr1_4:2231078-2231097 Msa0143320:CDS 40.0%
!! GTTGGTGATGAAATGAGAAG+GGG + chr1_4:2231079-2231098 Msa0143320:CDS 40.0%
GGATGAAATATCAACCGGTT+TGG + chr1_4:2231271-2231290 Msa0143320:CDS 40.0%
! AGTCATTTCCCTTTTACAGC+CGG + chr1_4:2231361-2231380 Msa0143320:CDS 40.0%
TTTAGGTGTCCTGAGAGAAA+AGG + chr1_4:2231491-2231510 Msa0143320:CDS 40.0%
TTTCTTTCACTAACGCAGCT+GGG - chr1_4:2231697-2231716 None:intergenic 40.0%
! TTTTCTTTCACTAACGCAGC+TGG - chr1_4:2231698-2231717 None:intergenic 40.0%
AGGAATGGCTTCTTATGAAG+AGG + chr1_4:2231762-2231781 Msa0143320:CDS 40.0%
CCATCTTGAACATTTCCAAC+TGG - chr1_4:2231872-2231891 None:intergenic 40.0%
CCAGTTGGAAATGTTCAAGA+TGG + chr1_4:2231869-2231888 Msa0143320:CDS 40.0%
CAAGATGGACAAAAGTTCCA+TGG + chr1_4:2231884-2231903 Msa0143320:CDS 40.0%
AACTATCCATGACTGTTGCT+AGG + chr1_4:2231954-2231973 Msa0143320:CDS 40.0%
! TCCCTTTGTTTGTAGAACAC+AGG - chr1_4:2231983-2232002 None:intergenic 40.0%
! TTTTATCCTGCATGGGCATT+TGG + chr1_4:2232010-2232029 Msa0143320:CDS 40.0%
GGGATCCTAAGAATCCATAT+GGG - chr1_4:2232040-2232059 None:intergenic 40.0%
AGGGATCCTAAGAATCCATA+TGG - chr1_4:2232041-2232060 None:intergenic 40.0%
! TAGGATCCCTCTTTCCTTTT+TGG + chr1_4:2232051-2232070 Msa0143320:CDS 40.0%
! GCTGATTCCAAAAAGGAAAG+AGG - chr1_4:2232061-2232080 None:intergenic 40.0%
!! CCATATCGCTGATTCCAAAA+AGG - chr1_4:2232068-2232087 None:intergenic 40.0%
!!! CCTTTTTGGAATCAGCGATA+TGG + chr1_4:2232065-2232084 Msa0143320:CDS 40.0%
!! ATTATCGGTTTGGTAGTGCA+TGG + chr1_4:2232250-2232269 Msa0143320:intron 40.0%
CGACAATTCTTGGCATTGTT+TGG + chr1_4:2232345-2232364 Msa0143320:CDS 40.0%
AAATAGCACTAGCAAGGTCA+AGG - chr1_4:2232451-2232470 None:intergenic 40.0%
AAGCACAAATAGCACTAGCA+AGG - chr1_4:2232457-2232476 None:intergenic 40.0%
!! TTGCTAGTGCTATTTGTGCT+TGG + chr1_4:2232456-2232475 Msa0143320:CDS 40.0%
GGAGGTTTCATTGTTGCTAA+AGG + chr1_4:2232477-2232496 Msa0143320:CDS 40.0%
ACATCAAGCCATGGATGATA+TGG + chr1_4:2232629-2232648 Msa0143320:CDS 40.0%
CATCAAGCCATGGATGATAT+GGG + chr1_4:2232630-2232649 Msa0143320:CDS 40.0%
ATCAAGCCATGGATGATATG+GGG + chr1_4:2232631-2232650 Msa0143320:CDS 40.0%
TAATAGCCCCATATCATCCA+TGG - chr1_4:2232640-2232659 None:intergenic 40.0%
GCATTCTGGCCATACATTAT+AGG - chr1_4:2232670-2232689 None:intergenic 40.0%
! CATTGATTGCTATGGCATTC+TGG - chr1_4:2232684-2232703 None:intergenic 40.0%
! AAAGTACTTCTCAAAGCCAG+AGG + chr1_4:2232924-2232943 Msa0143320:CDS 40.0%
ATCTTCTGTATACAAGCCTC+TGG - chr1_4:2232943-2232962 None:intergenic 40.0%
! ATCACCCAACGCTGAAATTT+TGG - chr1_4:2233131-2233150 None:intergenic 40.0%
TGATTCAAAAGCAGTCACTG+TGG + chr1_4:2233147-2233166 Msa0143320:CDS 40.0%
TTCTGATTAAGAACAGGCAC+CGG + chr1_4:2233467-2233486 Msa0143320:intron 40.0%
CAACTACTGCAAGATGTTAG+TGG + chr1_4:2233893-2233912 Msa0143320:CDS 40.0%
! TGTTAGTGGTGCTTTTAGAC+CGG + chr1_4:2233907-2233926 Msa0143320:CDS 40.0%
!! CGAATGTTGCTTGGTTCTTT+TGG - chr1_4:2234048-2234067 None:intergenic 40.0%
TTATTCGAGCGAATGTTGCT+TGG - chr1_4:2234057-2234076 None:intergenic 40.0%
TCTTAACATCCGAAGGAAGA+CGG - chr1_4:2234156-2234175 None:intergenic 40.0%
GTTTGTGTCTTAACATCCGA+AGG - chr1_4:2234163-2234182 None:intergenic 40.0%
CATGAAGATGATTGAAGGGT+TGG - chr1_4:2234414-2234433 None:intergenic 40.0%
CAACCCTTCAATCATCTTCA+TGG + chr1_4:2234412-2234431 Msa0143320:CDS 40.0%
TTCATGGATGAACCAACATC+AGG + chr1_4:2234428-2234447 Msa0143320:CDS 40.0%
! CTATTGTTGATGAAAAGGGG+AGG + chr1_4:2234648-2234667 Msa0143320:CDS 40.0%
GGAGGACAAGTTATATATGC+TGG + chr1_4:2234666-2234685 Msa0143320:CDS 40.0%
GTTATATATGCTGGACCTCT+CGG + chr1_4:2234675-2234694 Msa0143320:CDS 40.0%
CTACAAGCTTATATGAGTGG+CGG - chr1_4:2234701-2234720 None:intergenic 40.0%
ACAAACTTCAGGCTATCTCA+GGG + chr1_4:2234817-2234836 Msa0143320:intron 40.0%
CTCAGGGGTTCAAAAAAACA+AGG + chr1_4:2234833-2234852 Msa0143320:CDS 40.0%
GGGGTTCAAAAAAACAAGGA+AGG + chr1_4:2234837-2234856 Msa0143320:CDS 40.0%
AAGGTTATAATCCGGCTACA+TGG + chr1_4:2234856-2234875 Msa0143320:CDS 40.0%
AAGTACAAGTCCTTCGAATC+TGG - chr1_4:2235097-2235116 None:intergenic 40.0%
TATGGTCATCAAGAATCGGA+CGG - chr1_4:2235212-2235231 None:intergenic 40.0%
! AAAAAGCACAGCAGAGTACA+TGG - chr1_4:2235445-2235464 None:intergenic 40.0%
!!! TACTCTGCTGTGCTTTTTCT+TGG + chr1_4:2235447-2235466 Msa0143320:CDS 40.0%
AATGGAAACAACTGGTTGCA+CGG - chr1_4:2235490-2235509 None:intergenic 40.0%
GTTCTTGCAATGGAAACAAC+TGG - chr1_4:2235498-2235517 None:intergenic 40.0%
ATTGCCTTATGCATTTGGTC+AGG + chr1_4:2235557-2235576 Msa0143320:CDS 40.0%
ACTCCATGATTGGGTTTGAA+TGG + chr1_4:2235862-2235881 Msa0143320:CDS 40.0%
CTTCCATTCAAACCCAATCA+TGG - chr1_4:2235868-2235887 None:intergenic 40.0%
CATGATTGGGTTTGAATGGA+AGG + chr1_4:2235866-2235885 Msa0143320:CDS 40.0%
TAGTACCATCTCCACCATAT+AGG - chr1_4:2236263-2236282 None:intergenic 40.0%
! TATGGTGGAGATGGTACTAT+TGG + chr1_4:2236264-2236283 Msa0143320:CDS 40.0%
! ATGGTGGAGATGGTACTATT+GGG + chr1_4:2236265-2236284 Msa0143320:CDS 40.0%
AAATGAGCAACAGCAACTTG+TGG - chr1_4:2236434-2236453 None:intergenic 40.0%
! CAAGTTGCTGTTGCTCATTT+AGG + chr1_4:2236434-2236453 Msa0143320:CDS 40.0%
ATGCAAACACGAATGCAAAG+AGG - chr1_4:2236469-2236488 None:intergenic 40.0%
TAGTGATCGACACACACAAG+AGG + chr1_4:2229127-2229146 Msa0143320:CDS 45.0%
AAAAGTTGGCAACCGCTCAA+TGG - chr1_4:2229180-2229199 None:intergenic 45.0%
TCTGACCGCAAGTTAGTTGT+TGG + chr1_4:2229426-2229445 Msa0143320:intron 45.0%
TCAAACAACCAACCAGTGGT+TGG + chr1_4:2229457-2229476 Msa0143320:intron 45.0%
TGGACGGACCATATATGTTG+TGG + chr1_4:2229477-2229496 Msa0143320:intron 45.0%
TGTTGTGGTTCGTCAAACCA+CGG + chr1_4:2229492-2229511 Msa0143320:intron 45.0%
TGGTTGTTGGTCAATGTCCA+AGG + chr1_4:2229516-2229535 Msa0143320:intron 45.0%
GGTTGTTGGTCAATGTCCAA+GGG + chr1_4:2229517-2229536 Msa0143320:intron 45.0%
GTGGAAGGAGATGTGTATGT+TGG + chr1_4:2229918-2229937 Msa0143320:CDS 45.0%
TTCAGGATGACACTCCTTCT+AGG + chr1_4:2230252-2230271 Msa0143320:intron 45.0%
!!! GTTGTTTTTCCAGAACCTGG+AGG - chr1_4:2230279-2230298 None:intergenic 45.0%
ACATTGCTTCTAGCACTTGC+AGG + chr1_4:2230297-2230316 Msa0143320:CDS 45.0%
TCATCACGATGTCTAGGTGT+TGG + chr1_4:2230637-2230656 Msa0143320:CDS 45.0%
! AAAGCATCAATCTCAGGGTC+TGG - chr1_4:2230721-2230740 None:intergenic 45.0%
!! GAAATGAGAAGGGGTATCTC+CGG + chr1_4:2231088-2231107 Msa0143320:CDS 45.0%
ACCAGCACAAGCACTCTTTA+TGG + chr1_4:2231250-2231269 Msa0143320:CDS 45.0%
!! TCCATAAAGAGTGCTTGTGC+TGG - chr1_4:2231254-2231273 None:intergenic 45.0%
AGTTGTGGAACTGTCCAAAC+CGG - chr1_4:2231288-2231307 None:intergenic 45.0%
! TCAGCAATGCCTTTTCTCTC+AGG - chr1_4:2231503-2231522 None:intergenic 45.0%
GGGCATTTGGATTACCCATA+TGG + chr1_4:2232023-2232042 Msa0143320:CDS 45.0%
TCGTATTACCTGCTAGCAGA+AGG - chr1_4:2232124-2232143 None:intergenic 45.0%
! GGTAGTGCATGGATGTGTTT+TGG + chr1_4:2232261-2232280 Msa0143320:intron 45.0%
!! CTAGTGCTATTTGTGCTTGG+AGG + chr1_4:2232459-2232478 Msa0143320:CDS 45.0%
AACCAGTTGTACTCACTGAG+TGG + chr1_4:2232546-2232565 Msa0143320:intron 45.0%
TTGGATCTGTATTGCAGCCT+TGG + chr1_4:2232971-2232990 Msa0143320:CDS 45.0%
ATCTGTATTGCAGCCTTGGT+TGG + chr1_4:2232975-2232994 Msa0143320:CDS 45.0%
TCTGTATTGCAGCCTTGGTT+GGG + chr1_4:2232976-2232995 Msa0143320:CDS 45.0%
GAGAAGAGAAAACCCAACCA+AGG - chr1_4:2232991-2233010 None:intergenic 45.0%
AGAGTTTCTCACTTCCATGC+CGG - chr1_4:2233489-2233508 None:intergenic 45.0%
TCGAACAATGAACCGAGAAG+AGG + chr1_4:2233527-2233546 Msa0143320:CDS 45.0%
CAATGAACCGAGAAGAGGAA+TGG + chr1_4:2233532-2233551 Msa0143320:CDS 45.0%
GGTAGAACCATTCCTCTTCT+CGG - chr1_4:2233542-2233561 None:intergenic 45.0%
! GTTAGTGGTGCTTTTAGACC+GGG + chr1_4:2233908-2233927 Msa0143320:CDS 45.0%
ACAGCACTTGTAGGTGTTAG+TGG + chr1_4:2233938-2233957 Msa0143320:CDS 45.0%
ACCCTCATGGATGTATTAGC+TGG + chr1_4:2233974-2233993 Msa0143320:CDS 45.0%
CCCAGCTAATACATCCATGA+GGG - chr1_4:2233978-2233997 None:intergenic 45.0%
CCCTCATGGATGTATTAGCT+GGG + chr1_4:2233975-2233994 Msa0143320:CDS 45.0%
TCCCAGCTAATACATCCATG+AGG - chr1_4:2233979-2233998 None:intergenic 45.0%
GCAACATTCGCTCGAATAAG+TGG + chr1_4:2234058-2234077 Msa0143320:CDS 45.0%
! CACAAACTCGAAAGGTGTGT+TGG + chr1_4:2234176-2234195 Msa0143320:intron 45.0%
ACCACTTAGAGATGCTCTTG+TGG + chr1_4:2234319-2234338 Msa0143320:CDS 45.0%
CCACTTAGAGATGCTCTTGT+GGG + chr1_4:2234320-2234339 Msa0143320:CDS 45.0%
AGTTCGCATAACGATTGCAG+CGG - chr1_4:2234468-2234487 None:intergenic 45.0%
CACAAACTTCAGGCTATCTC+AGG + chr1_4:2234816-2234835 Msa0143320:intron 45.0%
CAAACTTCAGGCTATCTCAG+GGG + chr1_4:2234818-2234837 Msa0143320:intron 45.0%
! TTTTATCGGGAAAGAGCAGC+AGG + chr1_4:2235522-2235541 Msa0143320:CDS 45.0%
GGAAGGCAGCAAACTTCTTA+TGG + chr1_4:2235883-2235902 Msa0143320:CDS 45.0%
TAGAAATGCCAGCAACAACG+TGG - chr1_4:2235983-2236002 None:intergenic 45.0%
CGTTGTTGCTGGCATTTCTA+TGG + chr1_4:2235983-2236002 Msa0143320:CDS 45.0%
!! TCTCTGGCTTTGTCATTCCT+AGG + chr1_4:2236033-2236052 Msa0143320:CDS 45.0%
!! TGGCTTTGTCATTCCTAGGA+TGG + chr1_4:2236037-2236056 Msa0143320:CDS 45.0%
CCATATAGTGTCCATGCAAC+AGG - chr1_4:2236296-2236315 None:intergenic 45.0%
CCTGTTGCATGGACACTATA+TGG + chr1_4:2236293-2236312 Msa0143320:CDS 45.0%
GAAATAGTGATACCAGGAGC+TGG + chr1_4:2236350-2236369 Msa0143320:CDS 45.0%
! TTGCTGTTGCTCATTTAGGC+TGG + chr1_4:2236438-2236457 Msa0143320:CDS 45.0%
TGCTGTTGCTCATTTAGGCT+GGG + chr1_4:2236439-2236458 Msa0143320:CDS 45.0%
!! ATAATAATTTGAAAAAAAAA+TGG - chr1_4:2232235-2232254 None:intergenic 5.0%
!!! TTTTTTTTTCAAATTATTAT+CGG + chr1_4:2232235-2232254 Msa0143320:intron 5.0%
!! ATCGGTATTGGCAGGTGATG+AGG + chr1_4:2229007-2229026 Msa0143320:CDS 50.0%
TCACTACGCTCAAACACGTC+CGG - chr1_4:2229113-2229132 None:intergenic 50.0%
ACAACCAACCAGTGGTTGGA+CGG + chr1_4:2229461-2229480 Msa0143320:intron 50.0%
TATATGGTCCGTCCAACCAC+TGG - chr1_4:2229472-2229491 None:intergenic 50.0%
! GTCAAACCACGGTTGGTTGT+TGG + chr1_4:2229503-2229522 Msa0143320:intron 50.0%
CATTGACCAACAACCAACCG+TGG - chr1_4:2229512-2229531 None:intergenic 50.0%
GGCGAACAAAGAGAGAATCC+AGG + chr1_4:2229558-2229577 Msa0143320:intron 50.0%
TCAAGAAGGGAGAGAGAAGC+TGG + chr1_4:2230688-2230707 Msa0143320:CDS 50.0%
AGTGTAGGGGAGATGCTAGT+AGG + chr1_4:2231227-2231246 Msa0143320:intron 50.0%
AGTTCAAATGTCTCGGGTGC+CGG - chr1_4:2231383-2231402 None:intergenic 50.0%
AACTCTAGCACGTTCTCACG+CGG - chr1_4:2231455-2231474 None:intergenic 50.0%
GGAAATTGCGGCAGAGCTTA+AGG + chr1_4:2231646-2231665 Msa0143320:CDS 50.0%
AGGTAGCCTAGCAACAGTCA+TGG - chr1_4:2231963-2231982 None:intergenic 50.0%
GGTAATCCAAATGCCCATGC+AGG - chr1_4:2232019-2232038 None:intergenic 50.0%
! TTTCGGTTCGTTGCTGCAGT+TGG + chr1_4:2232393-2232412 Msa0143320:CDS 50.0%
CACCACTCAGTGAGTACAAC+TGG - chr1_4:2232551-2232570 None:intergenic 50.0%
TGGTAGAGGACATCAAGCCA+TGG + chr1_4:2232620-2232639 Msa0143320:intron 50.0%
TTCAAGGGGATGGTGTCTAG+AGG - chr1_4:2233203-2233222 None:intergenic 50.0%
TCTAGACACCATCCCCTTGA+AGG + chr1_4:2233202-2233221 Msa0143320:CDS 50.0%
ACACCATCCCCTTGAAGGTT+TGG + chr1_4:2233207-2233226 Msa0143320:intron 50.0%
GATCCAAACCTTCAAGGGGA+TGG - chr1_4:2233213-2233232 None:intergenic 50.0%
!! ATTAAGAACAGGCACCGGCA+TGG + chr1_4:2233472-2233491 Msa0143320:intron 50.0%
CTTGTAGGTGTTAGTGGTGC+TGG + chr1_4:2233944-2233963 Msa0143320:CDS 50.0%
TGCTGGAAAGACAACCCTCA+TGG + chr1_4:2233961-2233980 Msa0143320:CDS 50.0%
!! CCCACAAGAGCATCTCTAAG+TGG - chr1_4:2234323-2234342 None:intergenic 50.0%
ATAGACCATCCACACCTGGA+AGG - chr1_4:2234346-2234365 None:intergenic 50.0%
! GTTGATAGACCATCCACACC+TGG - chr1_4:2234350-2234369 None:intergenic 50.0%
ACCTCAAGCATCCATGTAGC+CGG - chr1_4:2234870-2234889 None:intergenic 50.0%
GGTCAGCTCAGCAACAATTG+AGG + chr1_4:2234887-2234906 Msa0143320:CDS 50.0%
TACTCCTGCACCAGATTCGA+AGG + chr1_4:2235084-2235103 Msa0143320:CDS 50.0%
AAGTCCTTCGAATCTGGTGC+AGG - chr1_4:2235091-2235110 None:intergenic 50.0%
ATTGGGCTTCTCCTGTTGCA+TGG + chr1_4:2236282-2236301 Msa0143320:CDS 50.0%
! GGTCTTATAACCTCGCAGCT+AGG + chr1_4:2236314-2236333 Msa0143320:CDS 50.0%
! ACTTTTGTCACCTAGCTGCG+AGG - chr1_4:2236327-2236346 None:intergenic 50.0%
! AGCTGGAAGCATGGAACTGA+AGG + chr1_4:2236367-2236386 Msa0143320:CDS 50.0%
GAGCAACAGCAACTTGTGGA+AGG - chr1_4:2236430-2236449 None:intergenic 50.0%
CAACAAGCAGTCGTCGGAGT+TGG + chr1_4:2229039-2229058 Msa0143320:CDS 55.0%
GTTGGACCTCGACGAGTTTC+CGG + chr1_4:2229057-2229076 Msa0143320:CDS 55.0%
TTGGACCTCGACGAGTTTCC+GGG + chr1_4:2229058-2229077 Msa0143320:CDS 55.0%
GAGTTTCCGGGACGTATGGA+CGG + chr1_4:2229070-2229089 Msa0143320:CDS 55.0%
ACGCTCAAACACGTCCGGAA+TGG - chr1_4:2229108-2229127 None:intergenic 55.0%
TCACTTGGGCAGCCATTGAG+CGG + chr1_4:2229165-2229184 Msa0143320:CDS 55.0%
GTGGTTCGTCAAACCACGGT+TGG + chr1_4:2229496-2229515 Msa0143320:intron 55.0%
ACACTCCTTCTAGGTCCTCC+AGG + chr1_4:2230261-2230280 Msa0143320:CDS 55.0%
CAGAACCTGGAGGACCTAGA+AGG - chr1_4:2230269-2230288 None:intergenic 55.0%
CTTCTAGGTCCTCCAGGTTC+TGG + chr1_4:2230267-2230286 Msa0143320:CDS 55.0%
CATGCTGGAGATAGAGGCAG+AGG - chr1_4:2230812-2230831 None:intergenic 55.0%
!! ATGAGAAGGGGTATCTCCGG+AGG + chr1_4:2231091-2231110 Msa0143320:CDS 55.0%
! GGTTTGCTCCTTCTGCTAGC+AGG + chr1_4:2232113-2232132 Msa0143320:CDS 55.0%
AGGGGATGGTGTCTAGAGGA+TGG - chr1_4:2233199-2233218 None:intergenic 55.0%
! CTAGCATCGAGGCCTGATGT+TGG - chr1_4:2234443-2234462 None:intergenic 55.0%
TTATATGAGTGGCGGCCGAG+AGG - chr1_4:2234693-2234712 None:intergenic 55.0%
TCCGGCTACATGGATGCTTG+AGG + chr1_4:2234866-2234885 Msa0143320:CDS 55.0%
ACACCAGACCACGTTGTTGC+TGG + chr1_4:2235972-2235991 Msa0143320:CDS 55.0%
ATGCCAGCAACAACGTGGTC+TGG - chr1_4:2235978-2235997 None:intergenic 55.0%
GATACCAGGAGCTGGAAGCA+TGG + chr1_4:2236358-2236377 Msa0143320:CDS 55.0%
AGTTCCATGCTTCCAGCTCC+TGG - chr1_4:2236365-2236384 None:intergenic 55.0%
TACGTCCCGGAAACTCGTCG+AGG - chr1_4:2229066-2229085 None:intergenic 60.0%
CGACGAGTTTCCGGGACGTA+TGG + chr1_4:2229066-2229085 Msa0143320:CDS 60.0%
CTGTTGCCGTCCATACGTCC+CGG - chr1_4:2229079-2229098 None:intergenic 60.0%
CGTATGGACGGCAACAGCAG+CGG + chr1_4:2229082-2229101 Msa0143320:CDS 60.0%
GCTCAATGGCTGCCCAAGTG+AGG - chr1_4:2229166-2229185 None:intergenic 60.0%
TGGTCCGTCCAACCACTGGT+TGG - chr1_4:2229468-2229487 None:intergenic 60.0%
!! CTCGGGTGCCGGCTGTAAAA+GGG - chr1_4:2231372-2231391 None:intergenic 60.0%
!! TCTCGGGTGCCGGCTGTAAA+AGG - chr1_4:2231373-2231392 None:intergenic 60.0%
GGCATGGCTCCGTCTTCCTT+CGG + chr1_4:2234144-2234163 Msa0143320:CDS 60.0%
GATGCTCTTGTGGGCCTTCC+AGG + chr1_4:2234329-2234348 Msa0143320:CDS 60.0%
TCTTGTGGGCCTTCCAGGTG+TGG + chr1_4:2234334-2234353 Msa0143320:CDS 60.0%
! TTGCAGCGGCTCTAGCATCG+AGG - chr1_4:2234454-2234473 None:intergenic 60.0%
GGCAACAGCAGCGGCCATTC+CGG + chr1_4:2229091-2229110 Msa0143320:CDS 65.0%
GTGGGCCTTCCAGGTGTGGA+TGG + chr1_4:2234338-2234357 Msa0143320:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 2229002 2236548 2229002 ID=Msa0143320;Name=Msa0143320
chr1_4 mRNA 2229002 2236548 2229002 ID=Msa0143320-mRNA-1;Parent=Msa0143320;Name=Msa0143320-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0.63|0.6|1|1|1|20|25|1457
chr1_4 exon 2229002 2229378 2229002 ID=Msa0143320-mRNA-1:exon:902;Parent=Msa0143320-mRNA-1
chr1_4 exon 2229869 2229989 2229869 ID=Msa0143320-mRNA-1:exon:903;Parent=Msa0143320-mRNA-1
chr1_4 exon 2230060 2230148 2230060 ID=Msa0143320-mRNA-1:exon:904;Parent=Msa0143320-mRNA-1
chr1_4 exon 2230257 2230341 2230257 ID=Msa0143320-mRNA-1:exon:905;Parent=Msa0143320-mRNA-1
chr1_4 exon 2230511 2230801 2230511 ID=Msa0143320-mRNA-1:exon:906;Parent=Msa0143320-mRNA-1
chr1_4 exon 2231046 2231136 2231046 ID=Msa0143320-mRNA-1:exon:907;Parent=Msa0143320-mRNA-1
chr1_4 exon 2231234 2232134 2231234 ID=Msa0143320-mRNA-1:exon:908;Parent=Msa0143320-mRNA-1
chr1_4 exon 2232338 2232498 2232338 ID=Msa0143320-mRNA-1:exon:909;Parent=Msa0143320-mRNA-1
chr1_4 exon 2232626 2232729 2232626 ID=Msa0143320-mRNA-1:exon:910;Parent=Msa0143320-mRNA-1
chr1_4 exon 2232885 2233050 2232885 ID=Msa0143320-mRNA-1:exon:911;Parent=Msa0143320-mRNA-1
chr1_4 exon 2233140 2233223 2233140 ID=Msa0143320-mRNA-1:exon:912;Parent=Msa0143320-mRNA-1
chr1_4 exon 2233483 2233619 2233483 ID=Msa0143320-mRNA-1:exon:913;Parent=Msa0143320-mRNA-1
chr1_4 exon 2233857 2234189 2233857 ID=Msa0143320-mRNA-1:exon:914;Parent=Msa0143320-mRNA-1
chr1_4 exon 2234281 2234571 2234281 ID=Msa0143320-mRNA-1:exon:915;Parent=Msa0143320-mRNA-1
chr1_4 exon 2234648 2234731 2234648 ID=Msa0143320-mRNA-1:exon:916;Parent=Msa0143320-mRNA-1
chr1_4 exon 2234828 2234961 2234828 ID=Msa0143320-mRNA-1:exon:917;Parent=Msa0143320-mRNA-1
chr1_4 exon 2235054 2235281 2235054 ID=Msa0143320-mRNA-1:exon:918;Parent=Msa0143320-mRNA-1
chr1_4 exon 2235407 2235578 2235407 ID=Msa0143320-mRNA-1:exon:919;Parent=Msa0143320-mRNA-1
chr1_4 exon 2235804 2236058 2235804 ID=Msa0143320-mRNA-1:exon:920;Parent=Msa0143320-mRNA-1
chr1_4 exon 2236254 2236548 2236254 ID=Msa0143320-mRNA-1:exon:921;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2229002 2229378 2229002 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2229869 2229989 2229869 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2230060 2230148 2230060 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2230257 2230341 2230257 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2230511 2230801 2230511 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2231046 2231136 2231046 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2231234 2232134 2231234 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2232338 2232498 2232338 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2232626 2232729 2232626 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2232885 2233050 2232885 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2233140 2233223 2233140 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2233483 2233619 2233483 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2233857 2234189 2233857 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2234281 2234571 2234281 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2234648 2234731 2234648 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2234828 2234961 2234828 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2235054 2235281 2235054 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2235407 2235578 2235407 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2235804 2236058 2235804 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 CDS 2236254 2236523 2236254 ID=Msa0143320-mRNA-1:cds;Parent=Msa0143320-mRNA-1
chr1_4 three_prime_UTR 2236524 2236548 2236524 ID=Msa0143320-mRNA-1:three_prime_utr;Parent=Msa0143320-mRNA-1
Gene Sequence

>Msa0143320

ATGGCATCGGTATTGGCAGGTGATGAGGTGACAATATCAACAAGCAGTCGTCGGAGTTGGACCTCGACGAGTTTCCGGGACGTATGGACGGCAACAGCAGCGGCCATTCCGGACGTGTTTGAGCGTAGTGATCGACACACACAAGAGGATGATGAATATCACCTCACTTGGGCAGCCATTGAGCGGTTGCCAACTTTTGAGCGTATGAGAAAAGGTGTAGTGAAGCATGTTGGTGAAAATGGAAAAGTTGTGCATGATGAAGTTGATGTTGCTAAGCTTGGTTTACATGATAAGAAGATCTTGTTGGATAGTATCCTCAAGATTGTTGAAGAAGACAATGAGAAGTTTCTTAGGAAACTTAGAGATAGACAAGACAGGGTGGGGATTGAAATTCCAAAAATTGAAGTTCGTTATGAGAATTTATCTGTGGAAGGAGATGTGTATGTTGGTAGCAGAGCACTTCCTACTTTACTTAATGTTACCATCAACACTTTGGAGAGTGTTCTTGGATTGTTTCGTCTTGCACCATCCAAGAAGAGAGAGATTCAGATTCTCAAACATGTTAGTGGAATTGTTAAACCATCAAGGATGACACTCCTTCTAGGTCCTCCAGGTTCTGGAAAAACAACATTGCTTCTAGCACTTGCAGGAAAACTTGATCGTGATTTACGGGCTTCTGGGAAAATAACTTACTGCGGTCATGAGCTAAATGAATTCGTTGCTGCAAAAACTTGCGCCTATATTAGTCAGCATGACATTCACTACGGAGAAATTACAGTGAGAGAGACTTTGGATTTTTCATCACGATGTCTAGGTGTTGGCAGTAGATATGAAATGTTGACAGAACTCTCAAGAAGGGAGAGAGAAGCTGGAATTAAACCAGACCCTGAGATTGATGCTTTCATGAAGGCTATTGCATTATCAGGCCAAAAAACCAGTTTCGTAACTGATTATGTTCTCAAGATGCTTGGATTGGATATTTGTGCTGACATTATGGTTGGTGATGAAATGAGAAGGGGTATCTCCGGAGGACAAAAGAAAAGAGTAACAACAGGGGAGATGCTAGTAGGACCAGCACAAGCACTCTTTATGGATGAAATATCAACCGGTTTGGACAGTTCCACAACTTTTCAAATATGCAAGTTTATGAGACAAATGGTTCACATAATGGATGTGACCGTAGTCATTTCCCTTTTACAGCCGGCACCCGAGACATTTGAACTTTTTGACGACATTATTCTACTTTCAGAAGGTCAAATTGTATATCAAGGACCGCGTGAGAACGTGCTAGAGTTCTTTGAATACACAGGTTTTAGGTGTCCTGAGAGAAAAGGCATTGCTGATTTCTTACAAGAAGTAACATCCAAGAAAGATCAACAACAATACTGGTTTAAAAGAGATGAACCTTATAGATATGTTTCAGTTCCTGAATTTGTTGATTTCTTTCATTCATTTCATATTGGAGAGGAAATTGCGGCAGAGCTTAAGGTTCCTTATAATAAGAGACAAACTCACCCAGCTGCGTTAGTGAAAGAAAAATATGGTATTTCAAATTGGGAACTATTTAAGGCATGTTTTTCAAAGGAATGGCTTCTTATGAAGAGGAATGCTTTTGTTTATGTATTCAAGACAACACAGATAACAATCATGTCGATTATTACTTTTACTGTATTCTTTAGAACAAAGATGCCAGTTGGAAATGTTCAAGATGGACAAAAGTTCCATGGTGCATTATTTTTTACACTGATAAATGTGATGTTCAATGGGATGGCAGAACTATCCATGACTGTTGCTAGGCTACCTGTGTTCTACAAACAAAGGGATTTCTTGTTTTATCCTGCATGGGCATTTGGATTACCCATATGGATTCTTAGGATCCCTCTTTCCTTTTTGGAATCAGCGATATGGATTGTTCTTACATATTTTACAATTGGGTTTGCTCCTTCTGCTAGCAGATTTTTTCGACAATTCTTGGCATTGTTTGGCATTCATCAGATGGCTCTTTCTTTATTTCGGTTCGTTGCTGCAGTTGGTAGAACACTAGTTATTGCTAATTCATTGGGTACCTTGACCTTGCTAGTGCTATTTGTGCTTGGAGGTTTCATTGTTGCTAAAGAGGACATCAAGCCATGGATGATATGGGGCTATTATATATCTCCTATAATGTATGGCCAGAATGCCATAGCAATCAATGAATTCTTAGACAAACGATGGAGTAAACCAAATACAGACACAAGAATTGATGCACCAACAATTGGAAAAGTACTTCTCAAAGCCAGAGGCTTGTATACAGAAGATTATTGGTATTGGATCTGTATTGCAGCCTTGGTTGGGTTTTCTCTTCTCTTCAACCTTCTCTTCATTCTTGCATTAACTTATTTGAATCCGTTGGGTGATTCAAAAGCAGTCACTGTGGATGAAGATGACAAGAAGAATGGGAATCCATCCTCTAGACACCATCCCCTTGAAGGCACCGGCATGGAAGTGAGAAACTCTTTAGAAATTATGAGTTCATCGAACAATGAACCGAGAAGAGGAATGGTTCTACCGTTTCAACCTCTTTCAATGACATTCAACCATATTAGCTACTATGTAGACATGCCAGCCGAAATGAAAAGTCAAGGAATCATTAAGGATAAGCTTCAACTACTGCAAGATGTTAGTGGTGCTTTTAGACCGGGTATATTAACAGCACTTGTAGGTGTTAGTGGTGCTGGAAAGACAACCCTCATGGATGTATTAGCTGGGAGAAAAACAGGTGGATACATCGAAGGAAATATCAGCATATCTGGTTACCAAAAGAACCAAGCAACATTCGCTCGAATAAGTGGTTACTGCGAACAGAATGACATTCATTCTCCACATGTTACTGTCTATGAATCACTATTGTTTTCGGCATGGCTCCGTCTTCCTTCGGATGTTAAGACACAAACTCGAAAGATGTTTGTTGAAGAAGTTATGGAGTTGGTAGAGCTGAAACCACTTAGAGATGCTCTTGTGGGCCTTCCAGGTGTGGATGGTCTATCAACAGAACAAAGGAAGAGGCTTACTATCGCTGTTGAGCTTGTTGCCAACCCTTCAATCATCTTCATGGATGAACCAACATCAGGCCTCGATGCTAGAGCCGCTGCAATCGTTATGCGAACTGTGAGAAATACAGTAGATACAGGGAGAACTGTTGTTTGCACAATTCATCAACCAAGTATAGACATTTTTGAAGCTTTTGATGAGCTATTGTTGATGAAAAGGGGAGGACAAGTTATATATGCTGGACCTCTCGGCCGCCACTCATATAAGCTTGTAGAATATTTTGAAGCTATCTCAGGGGTTCAAAAAAACAAGGAAGGTTATAATCCGGCTACATGGATGCTTGAGGTCAGCTCAGCAACAATTGAGGCTCAATTAGAAGTAGATTTTGCAGAGATTTATAACAATTCTACCCTTTACCAGAGGAATCAAGAACTTATAAAGGAGCTCAGTACTCCTGCACCAGATTCGAAGGACTTGTACTTCCCAACCAAATATTCACAGTCATTTTTTGTACAATGCAAAGCTAACTTCTGGAAACAACATTTGTCATATTGGAGACATTCTCAATATAATGCCGTCCGATTCTTGATGACCATAATCATTGGATTACTGTTTGGTCTAATATTTTGGATGCAAGCCAAAAAGACCAAAACACAACAAGATTTGCTGAATCTCTTGGGAGCCATGTACTCTGCTGTGCTTTTTCTTGGTGCGACAAATTCTTCAACCGTGCAACCAGTTGTTTCCATTGCAAGAACGATCTTTTATCGGGAAAGAGCAGCAGGAATGTATTCTTCATTGCCTTATGCATTTGGTCAGGTTGCAGTTGAGACAATTTATAATGCAATTCAAACAGCGATTTACACACTAATACTTTACTCCATGATTGGGTTTGAATGGAAGGCAGCAAACTTCTTATGGTTCTTTTACTACATACTAATGTGTTTTATCTACTTCACATTTTACGGAATGATGCTTGTTGCACTAACACCAGACCACGTTGTTGCTGGCATTTCTATGGCCTTCTTTTTGAGTTTTTGGAACTTGTTCTCTGGCTTTGTCATTCCTAGGATGCAAATTCCTATATGGTGGAGATGGTACTATTGGGCTTCTCCTGTTGCATGGACACTATATGGTCTTATAACCTCGCAGCTAGGTGACAAAAGTACAGAAATAGTGATACCAGGAGCTGGAAGCATGGAACTGAAGGAATTCTTGAAACAAAATTGGGGTTATGATCATGATTTCCTTCCACAAGTTGCTGTTGCTCATTTAGGCTGGGTTCTCCTCTTTGCATTCGTGTTTGCATTTGGCATCAAATTCCTCAACTTCCAGAGAAGATAA
Protein sequence

>Msa0143320

MASVLAGDEVTISTSSRRSWTSTSFRDVWTATAAAIPDVFERSDRHTQEDDEYHLTWAAIERLPTFERMRKGVVKHVGENGKVVHDEVDVAKLGLHDKKILLDSILKIVEEDNEKFLRKLRDRQDRVGIEIPKIEVRYENLSVEGDVYVGSRALPTLLNVTINTLESVLGLFRLAPSKKREIQILKHVSGIVKPSRMTLLLGPPGSGKTTLLLALAGKLDRDLRASGKITYCGHELNEFVAAKTCAYISQHDIHYGEITVRETLDFSSRCLGVGSRYEMLTELSRREREAGIKPDPEIDAFMKAIALSGQKTSFVTDYVLKMLGLDICADIMVGDEMRRGISGGQKKRVTTGEMLVGPAQALFMDEISTGLDSSTTFQICKFMRQMVHIMDVTVVISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLEFFEYTGFRCPERKGIADFLQEVTSKKDQQQYWFKRDEPYRYVSVPEFVDFFHSFHIGEEIAAELKVPYNKRQTHPAALVKEKYGISNWELFKACFSKEWLLMKRNAFVYVFKTTQITIMSIITFTVFFRTKMPVGNVQDGQKFHGALFFTLINVMFNGMAELSMTVARLPVFYKQRDFLFYPAWAFGLPIWILRIPLSFLESAIWIVLTYFTIGFAPSASRFFRQFLALFGIHQMALSLFRFVAAVGRTLVIANSLGTLTLLVLFVLGGFIVAKEDIKPWMIWGYYISPIMYGQNAIAINEFLDKRWSKPNTDTRIDAPTIGKVLLKARGLYTEDYWYWICIAALVGFSLLFNLLFILALTYLNPLGDSKAVTVDEDDKKNGNPSSRHHPLEGTGMEVRNSLEIMSSSNNEPRRGMVLPFQPLSMTFNHISYYVDMPAEMKSQGIIKDKLQLLQDVSGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGNISISGYQKNQATFARISGYCEQNDIHSPHVTVYESLLFSAWLRLPSDVKTQTRKMFVEEVMELVELKPLRDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRHSYKLVEYFEAISGVQKNKEGYNPATWMLEVSSATIEAQLEVDFAEIYNNSTLYQRNQELIKELSTPAPDSKDLYFPTKYSQSFFVQCKANFWKQHLSYWRHSQYNAVRFLMTIIIGLLFGLIFWMQAKKTKTQQDLLNLLGAMYSAVLFLGATNSSTVQPVVSIARTIFYRERAAGMYSSLPYAFGQVAVETIYNAIQTAIYTLILYSMIGFEWKAANFLWFFYYILMCFIYFTFYGMMLVALTPDHVVAGISMAFFLSFWNLFSGFVIPRMQIPIWWRWYYWASPVAWTLYGLITSQLGDKSTEIVIPGAGSMELKEFLKQNWGYDHDFLPQVAVAHLGWVLLFAFVFAFGIKFLNFQRR*