Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0650100 | XP_013456728.1 | 91.877 | 357 | 9 | 1 | 1 | 337 | 1 | 357 | 0.0 | 678 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0650100 | sp|Q5XLY0|ANR_GINBI | 43.235 | 340 | 150 | 7 | 17 | 325 | 4 | 331 | 2.08e-82 | 256 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0650100 | A0A072ULV1 | 91.877 | 357 | 9 | 1 | 1 | 337 | 1 | 357 | 0.0 | 678 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0650100 | 0.883477 | 4.340905e-71 | -8.615850e-47 |
| Msa0014590 | Msa0650100 | 0.817353 | 3.446618e-52 | -8.615850e-47 |
| Msa0027860 | Msa0650100 | 0.848855 | 4.696797e-60 | -8.615850e-47 |
| Msa0059880 | Msa0650100 | 0.847897 | 8.648006e-60 | -8.615850e-47 |
| Msa0063540 | Msa0650100 | 0.816178 | 6.323813e-52 | -8.615850e-47 |
| Msa0064990 | Msa0650100 | 0.827884 | 1.222585e-54 | -8.615850e-47 |
| Msa0074620 | Msa0650100 | 0.811696 | 6.154154e-51 | -8.615850e-47 |
| Msa0075560 | Msa0650100 | 0.819206 | 1.311910e-52 | -8.615850e-47 |
| Msa0108350 | Msa0650100 | 0.812731 | 3.657169e-51 | -8.615850e-47 |
| Msa0609460 | Msa0650100 | 0.941016 | 8.635536e-101 | -8.615850e-47 |
| Msa0629720 | Msa0650100 | 0.804916 | 1.716739e-49 | -8.615850e-47 |
| Msa0631700 | Msa0650100 | 0.838426 | 2.896534e-57 | -8.615850e-47 |
| Msa0634290 | Msa0650100 | 0.807556 | 4.770535e-50 | -8.615850e-47 |
| Msa0643840 | Msa0650100 | 0.828487 | 8.750610e-55 | -8.615850e-47 |
| Msa0650100 | Msa0665830 | 0.826728 | 2.313455e-54 | -8.615850e-47 |
| Msa0650100 | Msa0667600 | 0.804840 | 1.780829e-49 | -8.615850e-47 |
| Msa0650100 | Msa0670360 | 0.855310 | 6.872313e-62 | -8.615850e-47 |
| Msa0650100 | Msa0671640 | 0.820153 | 7.972196e-53 | -8.615850e-47 |
| Msa0650100 | Msa0678620 | 0.810921 | 9.064809e-51 | -8.615850e-47 |
| Msa0650100 | Msa0685080 | 0.800417 | 1.455415e-48 | -8.615850e-47 |
| Msa0650100 | Msa0692090 | 0.925248 | 2.372190e-90 | -8.615850e-47 |
| Msa0650100 | Msa0695630 | 0.802612 | 5.166283e-49 | -8.615850e-47 |
| Msa0650100 | Msa0711260 | 0.815380 | 9.525702e-52 | -8.615850e-47 |
| Msa0650100 | Msa0728210 | 0.809798 | 1.583356e-50 | -8.615850e-47 |
| Msa0650100 | Msa0753500 | 0.804444 | 2.153832e-49 | -8.615850e-47 |
| Msa0650100 | Msa0761420 | 0.806785 | 6.950630e-50 | -8.615850e-47 |
| Msa0650100 | Msa0768670 | 0.811832 | 5.746974e-51 | -8.615850e-47 |
| Msa0650100 | Msa0768720 | 0.806028 | 1.003777e-49 | -8.615850e-47 |
| Msa0650100 | Msa0787860 | 0.807188 | 5.710295e-50 | -8.615850e-47 |
| Msa0650100 | Msa0789220 | 0.801829 | 7.484566e-49 | -8.615850e-47 |
| Msa0650100 | Msa0789410 | 0.804159 | 2.469489e-49 | -8.615850e-47 |
| Msa0650100 | Msa0793570 | 0.803744 | 3.012069e-49 | -8.615850e-47 |
| Msa0650100 | Msa0795210 | 0.804434 | 2.164769e-49 | -8.615850e-47 |
| Msa0650100 | Msa0806930 | 0.819655 | 1.036197e-52 | -8.615850e-47 |
| Msa0650100 | Msa0814160 | 0.838479 | 2.806194e-57 | -8.615850e-47 |
| Msa0650100 | Msa0816140 | 0.809930 | 1.483583e-50 | -8.615850e-47 |
| Msa0650100 | Msa0822410 | 0.814709 | 1.341709e-51 | -8.615850e-47 |
| Msa0650100 | Msa0824850 | 0.812467 | 4.177697e-51 | -8.615850e-47 |
| Msa0650100 | Msa0831890 | 0.826421 | 2.738024e-54 | -8.615850e-47 |
| Msa0650100 | Msa0854840 | 0.811803 | 5.831672e-51 | -8.615850e-47 |
| Msa0650100 | Msa0861730 | 0.829141 | 6.075571e-55 | -8.615850e-47 |
| Msa0650100 | Msa0863850 | 0.804693 | 1.910821e-49 | -8.615850e-47 |
| Msa0650100 | Msa0863860 | 0.811308 | 7.471176e-51 | -8.615850e-47 |
| Msa0650100 | Msa0873880 | 0.810029 | 1.412511e-50 | -8.615850e-47 |
| Msa0650100 | Msa0876600 | 0.800556 | 1.363262e-48 | -8.615850e-47 |
| Msa0650100 | Msa0882880 | 0.800340 | 1.509155e-48 | -8.615850e-47 |
| Msa0650100 | Msa0893840 | 0.822005 | 2.984960e-53 | -8.615850e-47 |
| Msa0650100 | Msa0896920 | 0.842750 | 2.136204e-58 | -8.615850e-47 |
| Msa0650100 | Msa0896950 | 0.809213 | 2.114432e-50 | -8.615850e-47 |
| Msa0650100 | Msa0902340 | 0.803126 | 4.044283e-49 | -8.615850e-47 |
| Msa0650100 | Msa0907840 | 0.814527 | 1.471977e-51 | -8.615850e-47 |
| Msa0650100 | Msa0913550 | 0.825966 | 3.512454e-54 | -8.615850e-47 |
| Msa0650100 | Msa0921180 | 0.815372 | 9.564452e-52 | -8.615850e-47 |
| Msa0650100 | Msa0932140 | 0.808957 | 2.399372e-50 | -8.615850e-47 |
| Msa0650100 | Msa0932150 | 0.807538 | 4.813903e-50 | -8.615850e-47 |
| Msa0650100 | Msa0932930 | 0.818693 | 1.715396e-52 | -8.615850e-47 |
| Msa0650100 | Msa0946010 | 0.833726 | 4.518497e-56 | -8.615850e-47 |
| Msa0650100 | Msa0951150 | 0.838707 | 2.450093e-57 | -8.615850e-47 |
| Msa0650100 | Msa0962290 | 0.800543 | 1.372199e-48 | -8.615850e-47 |
| Msa0650100 | Msa0970270 | 0.804793 | 1.821837e-49 | -8.615850e-47 |
| Msa0650100 | Msa0970790 | 0.802435 | 5.618749e-49 | -8.615850e-47 |
| Msa0650100 | Msa0987640 | 0.822368 | 2.458904e-53 | -8.615850e-47 |
| Msa0650100 | Msa0993450 | 0.807770 | 4.296574e-50 | -8.615850e-47 |
| Msa0650100 | Msa0996980 | 0.857166 | 1.963564e-62 | -8.615850e-47 |
| Msa0650100 | Msa1006170 | 0.812647 | 3.816879e-51 | -8.615850e-47 |
| Msa0650100 | Msa1006220 | 0.805813 | 1.113482e-49 | -8.615850e-47 |
| Msa0650100 | Msa1018590 | 0.814396 | 1.573590e-51 | -8.615850e-47 |
| Msa0650100 | Msa1021620 | 0.819990 | 8.688787e-53 | -8.615850e-47 |
| Msa0650100 | Msa1022510 | 0.813505 | 2.474324e-51 | -8.615850e-47 |
| Msa0650100 | Msa1024350 | 0.807342 | 5.296977e-50 | -8.615850e-47 |
| Msa0650100 | Msa1024420 | 0.818733 | 1.680108e-52 | -8.615850e-47 |
| Msa0650100 | Msa1026050 | 0.805287 | 1.435918e-49 | -8.615850e-47 |
| Msa0650100 | Msa1030320 | 0.843016 | 1.815389e-58 | -8.615850e-47 |
| Msa0650100 | Msa1037530 | 0.816929 | 4.292878e-52 | -8.615850e-47 |
| Msa0650100 | Msa1042340 | 0.802540 | 5.344841e-49 | -8.615850e-47 |
| Msa0650100 | Msa1048350 | 0.827145 | 1.838958e-54 | -8.615850e-47 |
| Msa0650100 | Msa1048400 | 0.811130 | 8.165679e-51 | -8.615850e-47 |
| Msa0650100 | Msa1061670 | 0.815977 | 7.011295e-52 | -8.615850e-47 |
| Msa0650100 | Msa1063210 | 0.816456 | 5.479385e-52 | -8.615850e-47 |
| Msa0650100 | Msa1064940 | 0.834229 | 3.381263e-56 | -8.615850e-47 |
| Msa0650100 | Msa1068080 | 0.813744 | 2.192114e-51 | -8.615850e-47 |
| Msa0650100 | Msa1076830 | 0.815725 | 7.979853e-52 | -8.615850e-47 |
| Msa0650100 | Msa1079820 | 0.812596 | 3.914541e-51 | -8.615850e-47 |
| Msa0650100 | Msa1087370 | 0.803199 | 3.906986e-49 | -8.615850e-47 |
| Msa0650100 | Msa1087380 | 0.820426 | 6.903635e-53 | -8.615850e-47 |
| Msa0650100 | Msa1098100 | 0.825566 | 4.371096e-54 | -8.615850e-47 |
| Msa0650100 | Msa1100030 | 0.809862 | 1.533878e-50 | -8.615850e-47 |
| Msa0650100 | Msa1104960 | 0.808275 | 3.355453e-50 | -8.615850e-47 |
| Msa0650100 | Msa1106680 | 0.816143 | 6.436173e-52 | -8.615850e-47 |
| Msa0650100 | Msa1106960 | 0.809799 | 1.582762e-50 | -8.615850e-47 |
| Msa0650100 | Msa1109880 | 0.827403 | 1.595035e-54 | -8.615850e-47 |
| Msa0650100 | Msa1109890 | 0.828534 | 8.522513e-55 | -8.615850e-47 |
| Msa0650100 | Msa1120680 | 0.805861 | 1.088074e-49 | -8.615850e-47 |
| Msa0650100 | Msa1138110 | 0.841123 | 5.749888e-58 | -8.615850e-47 |
| Msa0650100 | Msa1147030 | 0.801540 | 8.581926e-49 | -8.615850e-47 |
| Msa0650100 | Msa1148210 | 0.823321 | 1.475277e-53 | -8.615850e-47 |
| Msa0650100 | Msa1152330 | 0.803846 | 2.868024e-49 | -8.615850e-47 |
| Msa0650100 | Msa1156240 | 0.818863 | 1.569437e-52 | -8.615850e-47 |
| Msa0650100 | Msa1157210 | 0.839088 | 1.952915e-57 | -8.615850e-47 |
| Msa0650100 | Msa1170340 | 0.817352 | 3.447679e-52 | -8.615850e-47 |
| Msa0650100 | Msa1181090 | 0.820917 | 5.323300e-53 | -8.615850e-47 |
| Msa0650100 | Msa1186340 | 0.810241 | 1.270897e-50 | -8.615850e-47 |
| Msa0650100 | Msa1188080 | 0.805998 | 1.018011e-49 | -8.615850e-47 |
| Msa0650100 | Msa1214960 | 0.803669 | 3.121398e-49 | -8.615850e-47 |
| Msa0650100 | Msa1223960 | 0.803388 | 3.570342e-49 | -8.615850e-47 |
| Msa0650100 | Msa1225850 | 0.809575 | 1.768523e-50 | -8.615850e-47 |
| Msa0650100 | Msa1226210 | 0.801882 | 7.299066e-49 | -8.615850e-47 |
| Msa0650100 | Msa1245530 | 0.826121 | 3.228044e-54 | -8.615850e-47 |
| Msa0650100 | Msa1267990 | 0.824194 | 9.212197e-54 | -8.615850e-47 |
| Msa0650100 | Msa1300610 | 0.803199 | 3.907363e-49 | -8.615850e-47 |
| Msa0650100 | Msa1321970 | 0.826082 | 3.297943e-54 | -8.615850e-47 |
| Msa0650100 | Msa1322500 | 0.808636 | 2.809252e-50 | -8.615850e-47 |
| Msa0650100 | Msa1323030 | 0.805443 | 1.331632e-49 | -8.615850e-47 |
| Msa0650100 | Msa1323120 | 0.839375 | 1.645111e-57 | -8.615850e-47 |
| Msa0650100 | Msa1343590 | 0.801346 | 9.404188e-49 | -8.615850e-47 |
| Msa0650100 | Msa1355340 | 0.807775 | 4.286788e-50 | -8.615850e-47 |
| Msa0650100 | Msa1357860 | 0.816714 | 4.795520e-52 | -8.615850e-47 |
| Msa0650100 | Msa1373560 | 0.805446 | 1.329831e-49 | -8.615850e-47 |
| Msa0650100 | Msa1376070 | 0.815167 | 1.062257e-51 | -8.615850e-47 |
| Msa0650100 | Msa1377520 | 0.801575 | 8.438837e-49 | -8.615850e-47 |
| Msa0650100 | Msa1380740 | 0.828446 | 8.950650e-55 | -8.615850e-47 |
| Msa0650100 | Msa1406840 | 0.803810 | 2.917908e-49 | -8.615850e-47 |
| Msa0650100 | Msa1409600 | 0.829666 | 4.530374e-55 | -8.615850e-47 |
| Msa0650100 | Msa1411550 | 0.828072 | 1.101458e-54 | -8.615850e-47 |
| Msa0650100 | Msa1419390 | 0.804092 | 2.549904e-49 | -8.615850e-47 |
| Msa0650100 | Msa1445900 | 0.826727 | 2.314547e-54 | -8.615850e-47 |
| Msa0650100 | Msa1446090 | 0.811709 | 6.113569e-51 | -8.615850e-47 |
| Msa0650100 | Msa1449770 | 0.801654 | 8.130527e-49 | -8.615850e-47 |
| Msa0650100 | Msa1453650 | 0.807242 | 5.563342e-50 | -8.615850e-47 |
| Msa0650100 | Msa1457850 | 0.803390 | 3.566892e-49 | -8.615850e-47 |
| Msa0650100 | Msa1459610 | 0.812615 | 3.879084e-51 | -8.615850e-47 |
| Msa0123530 | Msa0650100 | 0.824804 | 6.618381e-54 | -8.615850e-47 |
| Msa0140270 | Msa0650100 | 0.811371 | 7.238844e-51 | -8.615850e-47 |
| Msa0142560 | Msa0650100 | 0.813786 | 2.145626e-51 | -8.615850e-47 |
| Msa0143320 | Msa0650100 | 0.805081 | 1.585814e-49 | -8.615850e-47 |
| Msa0150910 | Msa0650100 | 0.873574 | 1.322835e-67 | -8.615850e-47 |
| Msa0150920 | Msa0650100 | 0.864426 | 1.226439e-64 | -8.615850e-47 |
| Msa0160580 | Msa0650100 | 0.810371 | 1.191458e-50 | -8.615850e-47 |
| Msa0163340 | Msa0650100 | 0.812487 | 4.137262e-51 | -8.615850e-47 |
| Msa0168010 | Msa0650100 | 0.855392 | 6.505895e-62 | -8.615850e-47 |
| Msa0177550 | Msa0650100 | 0.809165 | 2.165061e-50 | -8.615850e-47 |
| Msa0190670 | Msa0650100 | 0.839011 | 2.044788e-57 | -8.615850e-47 |
| Msa0190890 | Msa0650100 | 0.835547 | 1.575167e-56 | -8.615850e-47 |
| Msa0195190 | Msa0650100 | 0.807269 | 5.490179e-50 | -8.615850e-47 |
| Msa0195580 | Msa0650100 | 0.821078 | 4.887694e-53 | -8.615850e-47 |
| Msa0207640 | Msa0650100 | 0.828397 | 9.195492e-55 | -8.615850e-47 |
| Msa0209060 | Msa0650100 | 0.818597 | 1.803545e-52 | -8.615850e-47 |
| Msa0212550 | Msa0650100 | 0.809693 | 1.668238e-50 | -8.615850e-47 |
| Msa0225920 | Msa0650100 | 0.803354 | 3.629133e-49 | -8.615850e-47 |
| Msa0232990 | Msa0650100 | 0.808846 | 2.534126e-50 | -8.615850e-47 |
| Msa0233210 | Msa0650100 | 0.835550 | 1.571920e-56 | -8.615850e-47 |
| Msa0234130 | Msa0650100 | 0.800980 | 1.117054e-48 | -8.615850e-47 |
| Msa0238110 | Msa0650100 | 0.813146 | 2.967326e-51 | -8.615850e-47 |
| Msa0366510 | Msa0650100 | 0.819067 | 1.410998e-52 | -8.615850e-47 |
| Msa0374040 | Msa0650100 | 0.848044 | 7.875886e-60 | -8.615850e-47 |
| Msa0380680 | Msa0650100 | 0.812271 | 4.609837e-51 | -8.615850e-47 |
| Msa0396700 | Msa0650100 | 0.812084 | 5.064218e-51 | -8.615850e-47 |
| Msa0396730 | Msa0650100 | 0.803114 | 4.068187e-49 | -8.615850e-47 |
| Msa0396790 | Msa0650100 | 0.810179 | 1.310619e-50 | -8.615850e-47 |
| Msa0409530 | Msa0650100 | 0.804918 | 1.714966e-49 | -8.615850e-47 |
| Msa0414480 | Msa0650100 | 0.823785 | 1.148635e-53 | -8.615850e-47 |
| Msa0425950 | Msa0650100 | 0.815928 | 7.188648e-52 | -8.615850e-47 |
| Msa0426170 | Msa0650100 | 0.801776 | 7.675135e-49 | -8.615850e-47 |
| Msa0444250 | Msa0650100 | 0.809056 | 2.285081e-50 | -8.615850e-47 |
| Msa0444400 | Msa0650100 | 0.832546 | 8.886980e-56 | -8.615850e-47 |
| Msa0464310 | Msa0650100 | 0.826491 | 2.634626e-54 | -8.615850e-47 |
| Msa0469450 | Msa0650100 | 0.825811 | 3.824659e-54 | -8.615850e-47 |
| Msa0472390 | Msa0650100 | 0.803694 | 3.084127e-49 | -8.615850e-47 |
| Msa0242830 | Msa0650100 | 0.807064 | 6.066347e-50 | -8.615850e-47 |
| Msa0252930 | Msa0650100 | 0.803353 | 3.631021e-49 | -8.615850e-47 |
| Msa0261400 | Msa0650100 | 0.800290 | 1.544538e-48 | -8.615850e-47 |
| Msa0269710 | Msa0650100 | 0.802113 | 6.543434e-49 | -8.615850e-47 |
| Msa0272210 | Msa0650100 | 0.838983 | 2.079065e-57 | -8.615850e-47 |
| Msa0272230 | Msa0650100 | 0.820230 | 7.654680e-53 | -8.615850e-47 |
| Msa0274250 | Msa0650100 | 0.816500 | 5.354796e-52 | -8.615850e-47 |
| Msa0274260 | Msa0650100 | 0.810165 | 1.320108e-50 | -8.615850e-47 |
| Msa0278950 | Msa0650100 | 0.809386 | 1.941327e-50 | -8.615850e-47 |
| Msa0281190 | Msa0650100 | 0.838293 | 3.133344e-57 | -8.615850e-47 |
| Msa0288540 | Msa0650100 | 0.818823 | 1.603442e-52 | -8.615850e-47 |
| Msa0303900 | Msa0650100 | 0.805276 | 1.443549e-49 | -8.615850e-47 |
| Msa0311540 | Msa0650100 | 0.801876 | 7.320424e-49 | -8.615850e-47 |
| Msa0326770 | Msa0650100 | 0.829144 | 6.068371e-55 | -8.615850e-47 |
| Msa0328090 | Msa0650100 | 0.802718 | 4.911778e-49 | -8.615850e-47 |
| Msa0333770 | Msa0650100 | 0.801640 | 8.184507e-49 | -8.615850e-47 |
| Msa0348370 | Msa0650100 | 0.800946 | 1.135355e-48 | -8.615850e-47 |
| Msa0349930 | Msa0650100 | 0.818258 | 2.153037e-52 | -8.615850e-47 |
| Msa0354540 | Msa0650100 | 0.808366 | 3.208381e-50 | -8.615850e-47 |
| Msa0361700 | Msa0650100 | 0.821805 | 3.321985e-53 | -8.615850e-47 |
| Msa0490060 | Msa0650100 | 0.816389 | 5.670667e-52 | -8.615850e-47 |
| Msa0491780 | Msa0650100 | 0.809379 | 1.948101e-50 | -8.615850e-47 |
| Msa0491800 | Msa0650100 | 0.816539 | 5.248510e-52 | -8.615850e-47 |
| Msa0491830 | Msa0650100 | 0.814529 | 1.470555e-51 | -8.615850e-47 |
| Msa0491950 | Msa0650100 | 0.813796 | 2.134634e-51 | -8.615850e-47 |
| Msa0496060 | Msa0650100 | 0.805880 | 1.077984e-49 | -8.615850e-47 |
| Msa0496070 | Msa0650100 | 0.807560 | 4.763040e-50 | -8.615850e-47 |
| Msa0502940 | Msa0650100 | 0.817206 | 3.718717e-52 | -8.615850e-47 |
| Msa0515130 | Msa0650100 | 0.843434 | 1.404661e-58 | -8.615850e-47 |
| Msa0515150 | Msa0650100 | 0.823063 | 1.694348e-53 | -8.615850e-47 |
| Msa0530990 | Msa0650100 | 0.833575 | 4.928948e-56 | -8.615850e-47 |
| Msa0535570 | Msa0650100 | 0.868576 | 5.893609e-66 | -8.615850e-47 |
| Msa0538440 | Msa0650100 | 0.806962 | 6.376888e-50 | -8.615850e-47 |
| Msa0538530 | Msa0650100 | 0.804114 | 2.523695e-49 | -8.615850e-47 |
| Msa0543740 | Msa0650100 | 0.807161 | 5.786250e-50 | -8.615850e-47 |
| Msa0554660 | Msa0650100 | 0.806337 | 8.640649e-50 | -8.615850e-47 |
| Msa0555920 | Msa0650100 | 0.928047 | 5.013333e-92 | -8.615850e-47 |
| Msa0584370 | Msa0650100 | 0.800394 | 1.471258e-48 | -8.615850e-47 |
| Msa0587870 | Msa0650100 | 0.817216 | 3.700228e-52 | -8.615850e-47 |
| Msa0591490 | Msa0650100 | 0.856197 | 3.784553e-62 | -8.615850e-47 |
| Msa0594330 | Msa0650100 | 0.807438 | 5.055229e-50 | -8.615850e-47 |
| Msa0594630 | Msa0650100 | 0.803396 | 3.557033e-49 | -8.615850e-47 |
| Msa0599600 | Msa0650100 | 0.812479 | 4.153619e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0650100 | MtrunA17_Chr4g0042101 | 91.597 | 357 | 9 | 2 | 1 | 337 | 1 | 356 | 0.0 | 673 |
| Msa0650100 | MtrunA17_Chr1g0155431 | 42.090 | 335 | 153 | 8 | 25 | 335 | 9 | 326 | 2.19e-87 | 266 |
| Msa0650100 | MtrunA17_Chr1g0155411 | 40.653 | 337 | 159 | 8 | 25 | 337 | 9 | 328 | 6.09e-81 | 249 |
| Msa0650100 | MtrunA17_Chr7g0245741 | 38.554 | 332 | 174 | 9 | 22 | 334 | 6 | 326 | 6.93e-73 | 228 |
| Msa0650100 | MtrunA17_Chr7g0245731 | 37.349 | 332 | 178 | 9 | 22 | 334 | 56 | 376 | 4.24e-69 | 220 |
| Msa0650100 | MtrunA17_Chr7g0245641 | 37.313 | 335 | 177 | 8 | 22 | 334 | 43 | 366 | 3.31e-68 | 218 |
| Msa0650100 | MtrunA17_Chr7g0245671 | 37.015 | 335 | 178 | 9 | 22 | 334 | 6 | 329 | 3.59e-67 | 214 |
| Msa0650100 | MtrunA17_Chr4g0048961 | 36.970 | 330 | 168 | 7 | 23 | 325 | 13 | 329 | 3.02e-66 | 212 |
| Msa0650100 | MtrunA17_Chr7g0245691 | 36.012 | 336 | 181 | 9 | 22 | 334 | 6 | 330 | 3.36e-66 | 211 |
| Msa0650100 | MtrunA17_Chr7g0245631 | 33.735 | 332 | 190 | 7 | 22 | 334 | 6 | 326 | 2.26e-64 | 206 |
| Msa0650100 | MtrunA17_Chr8g0364051 | 39.688 | 320 | 156 | 7 | 25 | 322 | 9 | 313 | 1.32e-63 | 204 |
| Msa0650100 | MtrunA17_Chr8g0363831 | 39.375 | 320 | 159 | 7 | 25 | 325 | 10 | 313 | 1.09e-62 | 202 |
| Msa0650100 | MtrunA17_Chr3g0077221 | 38.871 | 319 | 163 | 10 | 25 | 325 | 11 | 315 | 4.63e-60 | 195 |
| Msa0650100 | MtrunA17_Chr5g0423551 | 38.110 | 328 | 176 | 8 | 23 | 334 | 3 | 319 | 2.05e-59 | 193 |
| Msa0650100 | MtrunA17_Chr3g0077231 | 37.658 | 316 | 171 | 8 | 25 | 325 | 7 | 311 | 1.40e-58 | 191 |
| Msa0650100 | MtrunA17_Chr4g0039311 | 39.623 | 318 | 158 | 9 | 25 | 321 | 12 | 316 | 3.21e-58 | 191 |
| Msa0650100 | MtrunA17_Chr4g0039321 | 39.688 | 320 | 155 | 9 | 25 | 321 | 10 | 314 | 1.01e-57 | 189 |
| Msa0650100 | MtrunA17_Chr2g0331211 | 33.837 | 331 | 191 | 8 | 23 | 337 | 4 | 322 | 2.41e-56 | 186 |
| Msa0650100 | MtrunA17_Chr4g0010991 | 36.036 | 333 | 178 | 7 | 25 | 334 | 9 | 329 | 6.92e-56 | 185 |
| Msa0650100 | MtrunA17_Chr7g0245711 | 35.354 | 297 | 165 | 7 | 54 | 334 | 3 | 288 | 1.34e-55 | 182 |
| Msa0650100 | MtrunA17_Chr4g0002661 | 35.061 | 328 | 185 | 9 | 23 | 336 | 12 | 325 | 5.73e-50 | 169 |
| Msa0650100 | MtrunA17_Chr5g0431311 | 36.792 | 318 | 171 | 10 | 25 | 325 | 6 | 310 | 1.56e-47 | 162 |
| Msa0650100 | MtrunA17_Chr3g0106111 | 33.432 | 338 | 173 | 11 | 25 | 334 | 6 | 319 | 8.27e-44 | 153 |
| Msa0650100 | MtrunA17_Chr4g0001321 | 34.451 | 328 | 180 | 11 | 25 | 335 | 18 | 327 | 3.99e-43 | 152 |
| Msa0650100 | MtrunA17_Chr2g0333781 | 35.474 | 327 | 176 | 11 | 25 | 334 | 21 | 329 | 4.08e-43 | 152 |
| Msa0650100 | MtrunA17_Chr4g0002961 | 35.061 | 328 | 185 | 11 | 23 | 336 | 12 | 325 | 3.24e-42 | 149 |
| Msa0650100 | MtrunA17_Chr2g0281991 | 30.448 | 335 | 195 | 9 | 23 | 327 | 7 | 333 | 5.11e-38 | 138 |
| Msa0650100 | MtrunA17_Chr7g0275521 | 30.347 | 346 | 196 | 15 | 23 | 334 | 6 | 340 | 4.45e-36 | 133 |
| Msa0650100 | MtrunA17_Chr2g0282001 | 29.882 | 338 | 193 | 10 | 23 | 327 | 6 | 332 | 7.25e-36 | 132 |
| Msa0650100 | MtrunA17_Chr2g0291541 | 30.488 | 328 | 198 | 13 | 25 | 334 | 11 | 326 | 1.37e-34 | 129 |
| Msa0650100 | MtrunA17_Chr2g0282011 | 29.240 | 342 | 190 | 9 | 23 | 327 | 7 | 333 | 1.29e-33 | 127 |
| Msa0650100 | MtrunA17_Chr5g0411071 | 27.273 | 297 | 187 | 11 | 25 | 309 | 13 | 292 | 2.03e-23 | 98.2 |
| Msa0650100 | MtrunA17_Chr6g0450211 | 27.237 | 257 | 157 | 9 | 25 | 263 | 56 | 300 | 2.57e-18 | 84.7 |
| Msa0650100 | MtrunA17_Chr3g0133771 | 22.628 | 274 | 168 | 10 | 23 | 278 | 3 | 250 | 3.11e-12 | 66.6 |
| Msa0650100 | MtrunA17_Chr3g0080551 | 37.500 | 104 | 61 | 2 | 119 | 221 | 13 | 113 | 3.72e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0650100 | AT4G27250.2 | 57.233 | 318 | 123 | 4 | 21 | 325 | 10 | 327 | 3.49e-126 | 365 |
| Msa0650100 | AT4G27250.1 | 56.402 | 328 | 120 | 4 | 21 | 325 | 10 | 337 | 9.75e-126 | 365 |
| Msa0650100 | AT5G42800.1 | 40.000 | 330 | 167 | 6 | 25 | 335 | 9 | 326 | 1.97e-81 | 253 |
| Msa0650100 | AT4G35420.1 | 38.855 | 332 | 174 | 9 | 22 | 337 | 6 | 324 | 1.30e-68 | 218 |
| Msa0650100 | AT1G09510.1 | 37.421 | 318 | 171 | 8 | 25 | 326 | 9 | 314 | 1.04e-63 | 205 |
| Msa0650100 | AT1G51410.1 | 37.231 | 325 | 178 | 7 | 25 | 334 | 10 | 323 | 7.50e-61 | 197 |
| Msa0650100 | AT1G61720.1 | 35.671 | 328 | 179 | 6 | 21 | 325 | 10 | 328 | 3.04e-60 | 197 |
| Msa0650100 | AT5G19440.1 | 39.375 | 320 | 156 | 10 | 25 | 321 | 11 | 315 | 1.51e-59 | 194 |
| Msa0650100 | AT1G66800.1 | 37.152 | 323 | 171 | 10 | 25 | 329 | 9 | 317 | 9.42e-59 | 192 |
| Msa0650100 | AT1G09490.1 | 34.985 | 323 | 182 | 7 | 25 | 329 | 9 | 321 | 6.06e-58 | 190 |
| Msa0650100 | AT1G09480.2 | 34.365 | 323 | 184 | 7 | 25 | 329 | 9 | 321 | 7.68e-54 | 179 |
| Msa0650100 | AT2G33590.1 | 35.802 | 324 | 175 | 11 | 19 | 325 | 4 | 311 | 1.56e-53 | 179 |
| Msa0650100 | AT1G09500.1 | 34.591 | 318 | 183 | 7 | 25 | 326 | 9 | 317 | 1.61e-53 | 179 |
| Msa0650100 | AT1G09480.1 | 34.365 | 323 | 184 | 7 | 25 | 329 | 56 | 368 | 1.88e-53 | 180 |
| Msa0650100 | AT1G09500.3 | 37.363 | 273 | 148 | 6 | 25 | 283 | 9 | 272 | 1.93e-53 | 177 |
| Msa0650100 | AT2G45400.1 | 35.015 | 337 | 187 | 7 | 21 | 334 | 37 | 364 | 2.17e-53 | 179 |
| Msa0650100 | AT1G68540.1 | 35.152 | 330 | 187 | 10 | 22 | 334 | 2 | 321 | 1.50e-51 | 174 |
| Msa0650100 | AT2G33600.1 | 36.585 | 328 | 169 | 11 | 18 | 325 | 3 | 311 | 9.67e-50 | 169 |
| Msa0650100 | AT5G58490.1 | 36.061 | 330 | 175 | 11 | 25 | 334 | 10 | 323 | 5.50e-48 | 164 |
| Msa0650100 | AT1G25460.1 | 34.650 | 329 | 188 | 9 | 22 | 334 | 2 | 319 | 5.46e-47 | 162 |
| Msa0650100 | AT2G02400.1 | 32.523 | 329 | 186 | 11 | 25 | 334 | 7 | 318 | 2.75e-46 | 160 |
| Msa0650100 | AT2G45400.2 | 34.397 | 282 | 156 | 5 | 21 | 281 | 37 | 310 | 3.39e-45 | 157 |
| Msa0650100 | AT1G76470.1 | 32.523 | 329 | 195 | 8 | 23 | 335 | 6 | 323 | 1.50e-43 | 153 |
| Msa0650100 | AT1G09490.2 | 30.872 | 298 | 181 | 6 | 47 | 329 | 3 | 290 | 6.51e-43 | 150 |
| Msa0650100 | AT2G45400.3 | 33.115 | 305 | 177 | 6 | 48 | 334 | 12 | 307 | 4.66e-41 | 145 |
| Msa0650100 | AT1G80820.1 | 32.530 | 332 | 181 | 12 | 25 | 335 | 9 | 318 | 5.87e-40 | 144 |
| Msa0650100 | AT1G15950.3 | 32.110 | 327 | 187 | 11 | 25 | 334 | 14 | 322 | 6.01e-40 | 144 |
| Msa0650100 | AT1G15950.1 | 32.110 | 327 | 187 | 11 | 25 | 334 | 14 | 322 | 6.01e-40 | 144 |
| Msa0650100 | AT1G15950.2 | 33.007 | 306 | 171 | 10 | 25 | 313 | 14 | 302 | 4.51e-39 | 141 |
| Msa0650100 | AT1G09500.2 | 31.119 | 286 | 175 | 6 | 54 | 326 | 7 | 283 | 9.36e-38 | 137 |
| Msa0650100 | AT1G15950.4 | 33.451 | 284 | 156 | 9 | 25 | 291 | 14 | 281 | 5.69e-36 | 132 |
| Msa0650100 | AT1G15950.6 | 33.813 | 278 | 151 | 9 | 25 | 285 | 14 | 275 | 9.80e-36 | 131 |
| Msa0650100 | AT1G15950.5 | 33.813 | 278 | 151 | 9 | 25 | 285 | 14 | 275 | 1.23e-35 | 131 |
| Msa0650100 | AT2G45400.4 | 36.866 | 217 | 121 | 4 | 21 | 229 | 37 | 245 | 3.44e-35 | 129 |
| Msa0650100 | AT1G80820.2 | 34.043 | 282 | 145 | 10 | 25 | 285 | 9 | 270 | 2.78e-33 | 124 |
| Msa0650100 | AT2G23910.2 | 28.235 | 255 | 155 | 8 | 25 | 266 | 11 | 250 | 3.07e-24 | 100 |
| Msa0650100 | AT2G23910.3 | 28.235 | 255 | 155 | 8 | 25 | 266 | 11 | 250 | 3.09e-24 | 100 |
| Msa0650100 | AT2G23910.1 | 28.235 | 255 | 155 | 8 | 25 | 266 | 11 | 250 | 4.62e-24 | 100 |
| Msa0650100 | AT4G30470.1 | 29.412 | 255 | 151 | 9 | 25 | 266 | 11 | 249 | 3.36e-22 | 95.5 |
| Msa0650100 | AT1G68540.2 | 30.275 | 218 | 134 | 6 | 131 | 334 | 1 | 214 | 7.98e-20 | 87.0 |
| Msa0650100 | AT4G33360.2 | 24.453 | 274 | 163 | 12 | 23 | 278 | 14 | 261 | 4.97e-16 | 77.8 |
| Msa0650100 | AT4G33360.1 | 24.453 | 274 | 163 | 12 | 23 | 278 | 14 | 261 | 5.46e-16 | 78.2 |
| Msa0650100 | AT4G33360.3 | 24.453 | 274 | 163 | 12 | 23 | 278 | 2 | 249 | 7.54e-16 | 77.8 |
| Msa0650100 | AT1G15950.7 | 28.571 | 231 | 143 | 9 | 119 | 334 | 1 | 224 | 1.62e-15 | 75.5 |
| Msa0650100 | AT2G23910.4 | 27.404 | 208 | 126 | 7 | 69 | 266 | 24 | 216 | 5.34e-15 | 74.3 |
| Msa0650100 | AT5G14700.1 | 26.255 | 259 | 162 | 9 | 25 | 263 | 56 | 305 | 3.17e-14 | 73.2 |
| Msa0650100 | AT5G14700.2 | 26.168 | 214 | 140 | 7 | 25 | 229 | 56 | 260 | 3.93e-11 | 63.5 |
Find 66 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAATTTGCTAAAGATAA+TGG | 0.183537 | 4_3:-56852015 | Msa0650100:CDS |
| GCAAGATTTGAGCAGGTTTA+TGG | 0.190488 | 4_3:+56852315 | None:intergenic |
| ACACAGTGTCAGTTTGTATT+TGG | 0.230014 | 4_3:+56852188 | None:intergenic |
| ATTATGTGTTGCCTAGATTA+TGG | 0.244579 | 4_3:-56851051 | Msa0650100:CDS |
| GGCACCTGTAACACAATATT+TGG | 0.281952 | 4_3:+56857523 | None:intergenic |
| TTTATGGTTCCTTTGATTGC+AGG | 0.296003 | 4_3:+56852331 | None:intergenic |
| ACTGCCAAATATTGTGTTAC+AGG | 0.302149 | 4_3:-56857527 | Msa0650100:CDS |
| CTCAAAGAAACTAAAAGATC+TGG | 0.318600 | 4_3:-56851118 | Msa0650100:CDS |
| TTAAATTTGCTAAAGATAAT+GGG | 0.324810 | 4_3:-56852014 | Msa0650100:CDS |
| ACAGGTGCCACAGGGTATAT+TGG | 0.354757 | 4_3:-56857509 | Msa0650100:CDS |
| AGTTGGATTAGAATACTCTT+TGG | 0.355460 | 4_3:+56851283 | None:intergenic |
| TGAAATCCAATTCTGTGAAA+AGG | 0.362071 | 4_3:-56852291 | Msa0650100:CDS |
| CAATGCTCACATATTCTTGA+TGG | 0.364605 | 4_3:-56851381 | Msa0650100:CDS |
| CCACAGGGTATATTGGTTCA+TGG | 0.374216 | 4_3:-56857502 | Msa0650100:CDS |
| AGCTTCGATGAGGCAGTAAA+AGG | 0.376180 | 4_3:-56852567 | Msa0650100:CDS |
| GTTATAACAAGCACTGTTGC+AGG | 0.378815 | 4_3:-56851976 | Msa0650100:CDS |
| TGGCAAGATTCATCAACAAT+AGG | 0.382737 | 4_3:+56852208 | None:intergenic |
| TTTGATGTACTATTTCTTCA+AGG | 0.382990 | 4_3:+56851076 | None:intergenic |
| CGCGCTGATTTGCACGAAGA+AGG | 0.398678 | 4_3:-56852591 | Msa0650100:CDS |
| TAATGGGATTGATCTTGTTT+CGG | 0.400774 | 4_3:-56851998 | Msa0650100:CDS |
| GAGTGTTACCTTAGCGTAGT+TGG | 0.408387 | 4_3:+56851266 | None:intergenic |
| GAAATCCAATTCTGTGAAAA+GGG | 0.430378 | 4_3:-56852290 | Msa0650100:CDS |
| GGTGGTAATGAAGGAAGAAA+TGG | 0.456131 | 4_3:-56857594 | None:intergenic |
| TCTGCTGTAAATGCACGAAT+GGG | 0.461394 | 4_3:-56851437 | Msa0650100:CDS |
| CATGCTACTGTCAGAGATCC+TGG | 0.464239 | 4_3:-56857443 | Msa0650100:intron |
| AAGCTGTACACTGTCTAACT+TGG | 0.483131 | 4_3:-56851318 | Msa0650100:CDS |
| TTATGGTTCCTTTGATTGCA+GGG | 0.488008 | 4_3:+56852332 | None:intergenic |
| AAGGTAAATAACCATAATCT+AGG | 0.489051 | 4_3:+56851040 | None:intergenic |
| CCATTACTTACCCATCCACT+TGG | 0.492651 | 4_3:+56852154 | None:intergenic |
| ATCTGCTGTAAATGCACGAA+TGG | 0.493103 | 4_3:-56851438 | Msa0650100:CDS |
| TCAAAGAAACTAAAAGATCT+GGG | 0.495370 | 4_3:-56851117 | Msa0650100:CDS |
| ATTTCAAGCAAGATTTGAGC+AGG | 0.496756 | 4_3:+56852308 | None:intergenic |
| ACACCTCCTGTCATTGTGGA+AGG | 0.512956 | 4_3:-56852637 | Msa0650100:CDS |
| TATTGTGTTACAGGTGCCAC+AGG | 0.519643 | 4_3:-56857518 | Msa0650100:CDS |
| CTAAAGATAGCAATGGAAAG+TGG | 0.532380 | 4_3:-56852234 | Msa0650100:CDS |
| CACCACCCTTCCACAATGAC+AGG | 0.541255 | 4_3:+56852631 | None:intergenic |
| GTTGAAGCTCTTCTTCAAAG+AGG | 0.555164 | 4_3:-56857476 | Msa0650100:CDS |
| GGAATACACAACCAAGTGGA+TGG | 0.556204 | 4_3:-56852165 | Msa0650100:CDS |
| ATCTCTGACAGTAGCATGAA+CGG | 0.558337 | 4_3:+56857448 | None:intergenic |
| ATAATTGACCCTGCAATCAA+AGG | 0.559331 | 4_3:-56852340 | Msa0650100:CDS |
| AATGGAGGAAGCAATGAGGA+TGG | 0.563316 | 4_3:-56857576 | Msa0650100:CDS |
| ATTACTGCTAAAGATAGCAA+TGG | 0.565154 | 4_3:-56852241 | Msa0650100:CDS |
| CGTTACACCTCCTGTCATTG+TGG | 0.567359 | 4_3:-56852641 | Msa0650100:CDS |
| ATGGAACATGCTAAAGCAGA+AGG | 0.572323 | 4_3:-56851362 | Msa0650100:CDS |
| CACCTCCTGTCATTGTGGAA+GGG | 0.580068 | 4_3:-56852636 | Msa0650100:CDS |
| TTCTTTGAGGAAATTTCAGT+AGG | 0.582662 | 4_3:+56851132 | None:intergenic |
| ATTCTAATCCAACTACGCTA+AGG | 0.591677 | 4_3:-56851274 | Msa0650100:intron |
| GGTAATGAAGGAAGAAATGG+AGG | 0.593995 | 4_3:-56857591 | None:intergenic |
| GTAACACAATATTTGGCAGT+AGG | 0.604825 | 4_3:+56857530 | None:intergenic |
| AAGAAATGGAGGAAGCAATG+AGG | 0.616615 | 4_3:-56857580 | Msa0650100:CDS |
| GAATACACAACCAAGTGGAT+GGG | 0.623474 | 4_3:-56852164 | Msa0650100:intron |
| ATTAATGAGAAAGAAAACAT+TGG | 0.630403 | 4_3:-56852501 | Msa0650100:intron |
| AAGACTAGTAGCTAAACAGA+AGG | 0.645126 | 4_3:+56851021 | None:intergenic |
| ATTGCATTGAAGCTGCAACA+TGG | 0.647004 | 4_3:+56852529 | None:intergenic |
| CTCCTGTCATTGTGGAAGGG+TGG | 0.654676 | 4_3:-56852633 | Msa0650100:CDS |
| GAGGCAGTAAAAGGATGTGA+TGG | 0.658885 | 4_3:-56852558 | Msa0650100:CDS |
| CGAAGAAGGAAGCTTCGATG+AGG | 0.670075 | 4_3:-56852577 | Msa0650100:CDS |
| CACCCTTCCACAATGACAGG+AGG | 0.673181 | 4_3:+56852634 | None:intergenic |
| AACATGCTAAAGCAGAAGGT+AGG | 0.675020 | 4_3:-56851358 | Msa0650100:CDS |
| AAATACAAACTGACACTGTG+TGG | 0.677088 | 4_3:-56852186 | Msa0650100:CDS |
| CTGCTGTAAATGCACGAATG+GGG | 0.681829 | 4_3:-56851436 | Msa0650100:CDS |
| GTGTGGAATACACAACCAAG+TGG | 0.719552 | 4_3:-56852169 | Msa0650100:CDS |
| CTTCTTCGTGCAAATCAGCG+CGG | 0.720406 | 4_3:+56852592 | None:intergenic |
| ATTGTGTTACAGGTGCCACA+GGG | 0.721235 | 4_3:-56857517 | Msa0650100:CDS |
| GAAGAGTCAGAAATATGACA+AGG | 0.727881 | 4_3:-56851157 | Msa0650100:CDS |
| CCATGAACCAATATACCCTG+TGG | 0.749348 | 4_3:+56857502 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGATAAAATATAATCAA+CGG | - | chr4_3:56851543-56851562 | Msa0650100:intron | 10.0% |
| !!! | TCTTAATTTGTATTAATTTT+AGG | - | chr4_3:56851724-56851743 | Msa0650100:intron | 10.0% |
| !!! | CTTAATTTGTATTAATTTTA+GGG | - | chr4_3:56851725-56851744 | Msa0650100:intron | 10.0% |
| !!! | TAAGTAAATTTTTTTTTGTA+GGG | + | chr4_3:56851828-56851847 | None:intergenic | 10.0% |
| !!! | ATAAGTAAATTTTTTTTTGT+AGG | + | chr4_3:56851829-56851848 | None:intergenic | 10.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | + | chr4_3:56851890-56851909 | None:intergenic | 10.0% |
| !! | AGATATAAGTAATAAAAATT+TGG | - | chr4_3:56852021-56852040 | Msa0650100:CDS | 10.0% |
| !! | TAAAAATGCTATTAAAATTA+AGG | - | chr4_3:56852208-56852227 | Msa0650100:CDS | 10.0% |
| !!! | TAGTGTTATTTTTTTTAAAA+AGG | - | chr4_3:56852430-56852449 | Msa0650100:intron | 10.0% |
| !!! | ATATAATTTCTCTTTAAAAT+TGG | - | chr4_3:56853561-56853580 | Msa0650100:intron | 10.0% |
| !! | TTAAAATGTTTAAATTAACT+TGG | - | chr4_3:56853806-56853825 | Msa0650100:intron | 10.0% |
| !! | ATAAATTAATTTATTTATCG+AGG | + | chr4_3:56855753-56855772 | None:intergenic | 10.0% |
| !! | TGTTTATTTAATTGATCAAT+AGG | - | chr4_3:56851312-56851331 | Msa0650100:CDS | 15.0% |
| !!! | AACAAATAATTTAGTTTGTT+TGG | + | chr4_3:56851506-56851525 | None:intergenic | 15.0% |
| !!! | ACAAATTAAGACTTTTTTTA+GGG | + | chr4_3:56851715-56851734 | None:intergenic | 15.0% |
| !!! | TACAAATTAAGACTTTTTTT+AGG | + | chr4_3:56851716-56851735 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr4_3:56851799-56851818 | None:intergenic | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | + | chr4_3:56851861-56851880 | None:intergenic | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | + | chr4_3:56851862-56851881 | None:intergenic | 15.0% |
| !!! | AATTTTTGCGATATTTTTTT+CGG | - | chr4_3:56852056-56852075 | Msa0650100:CDS | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | - | chr4_3:56852140-56852159 | Msa0650100:intron | 15.0% |
| !! | TTCCTTAAAAATAAATAAGT+TGG | - | chr4_3:56852691-56852710 | Msa0650100:intron | 15.0% |
| !!! | TACCAACTTATTTATTTTTA+AGG | + | chr4_3:56852696-56852715 | None:intergenic | 15.0% |
| !! | TAAAACTAAATGATTAGAAA+AGG | + | chr4_3:56852792-56852811 | None:intergenic | 15.0% |
| !! | TGATATTTGAACAATTATTT+CGG | - | chr4_3:56853445-56853464 | Msa0650100:intron | 15.0% |
| !!! | TATTTAGTTTCATCTTAAAA+TGG | + | chr4_3:56853603-56853622 | None:intergenic | 15.0% |
| !!! | TTTTAAAGGATTTTTCTTTT+AGG | + | chr4_3:56853753-56853772 | None:intergenic | 15.0% |
| !!! | GTTAATTTAAACATTTTAAG+AGG | + | chr4_3:56853805-56853824 | None:intergenic | 15.0% |
| !!! | AAAAACAAGTTTGTTTTATT+TGG | - | chr4_3:56854318-56854337 | Msa0650100:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr4_3:56854512-56854531 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr4_3:56854511-56854530 | Msa0650100:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr4_3:56854535-56854554 | Msa0650100:intron | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr4_3:56854638-56854657 | Msa0650100:intron | 15.0% |
| !!! | TTTAAATTTGCTAAAGATAA+TGG | - | chr4_3:56856604-56856623 | Msa0650100:intron | 15.0% |
| !!! | TTAAATTTGCTAAAGATAAT+GGG | - | chr4_3:56856605-56856624 | Msa0650100:intron | 15.0% |
| !! | TATAAAATGTTGTTAAATAG+TGG | - | chr4_3:56856761-56856780 | Msa0650100:intron | 15.0% |
| !! | ATATGTATATTAAATTCTTC+AGG | - | chr4_3:56857389-56857408 | Msa0650100:intron | 15.0% |
| !! | TATGTATATTAAATTCTTCA+GGG | - | chr4_3:56857390-56857409 | Msa0650100:intron | 15.0% |
| !! | AAGAAAAAAAGAGATTGAAT+GGG | + | chr4_3:56851210-56851229 | None:intergenic | 20.0% |
| !! | TAAGAAAAAAAGAGATTGAA+TGG | + | chr4_3:56851211-56851230 | None:intergenic | 20.0% |
| !! | TGATTTCATTTGAACTTAAT+TGG | - | chr4_3:56851289-56851308 | Msa0650100:CDS | 20.0% |
| !! | TAAAGTATGAAATTAGTCAA+CGG | - | chr4_3:56851649-56851668 | Msa0650100:intron | 20.0% |
| !!! | TTTAGGGTTAATTATGTTTT+TGG | - | chr4_3:56851741-56851760 | Msa0650100:intron | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAC+AGG | + | chr4_3:56852110-56852129 | None:intergenic | 20.0% |
| !! | AATGCTATTAAAATTAAGGA+AGG | - | chr4_3:56852212-56852231 | Msa0650100:CDS | 20.0% |
| !!! | TTAAGGGTTAATTATGTTTT+TGG | + | chr4_3:56852270-56852289 | None:intergenic | 20.0% |
| !! | TAATTAACCCTTAATTTCAA+TGG | - | chr4_3:56852276-56852295 | Msa0650100:CDS | 20.0% |
| !! | GTTAAAACCATTGAAATTAA+GGG | + | chr4_3:56852286-56852305 | None:intergenic | 20.0% |
| !! | TGTTAAAACCATTGAAATTA+AGG | + | chr4_3:56852287-56852306 | None:intergenic | 20.0% |
| !! | AGAAAAAGAAAGAAAAAAAG+TGG | - | chr4_3:56852346-56852365 | Msa0650100:CDS | 20.0% |
| !! | CTATCTATCTATATTATGAA+TGG | - | chr4_3:56852726-56852745 | Msa0650100:intron | 20.0% |
| !!! | TGGAAGCATATAAATTTTTT+TGG | - | chr4_3:56852877-56852896 | Msa0650100:intron | 20.0% |
| !!! | ATATTTTGATCGATTTGTAT+GGG | + | chr4_3:56853049-56853068 | None:intergenic | 20.0% |
| !! | AGTTGAGCATAAATAATAAA+TGG | - | chr4_3:56853377-56853396 | Msa0650100:intron | 20.0% |
| !!! | TTTCTTTTAGGTTAATTCTT+TGG | + | chr4_3:56853741-56853760 | None:intergenic | 20.0% |
| !!! | AAAATTTATATGACTGACTT+TGG | + | chr4_3:56854090-56854109 | None:intergenic | 20.0% |
| !! | TTCGAATCAATTAAAATAGT+CGG | - | chr4_3:56854246-56854265 | Msa0650100:intron | 20.0% |
| !!! | TTTGTTTTATTTGGTTCAAT+CGG | - | chr4_3:56854327-56854346 | Msa0650100:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr4_3:56854521-56854540 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr4_3:56854598-56854617 | Msa0650100:intron | 20.0% |
| !!! | AAAGATTATTTCTTATGTGT+CGG | + | chr4_3:56854975-56854994 | None:intergenic | 20.0% |
| !! | CTAAACAAATTCAACTAAAT+TGG | + | chr4_3:56855196-56855215 | None:intergenic | 20.0% |
| !!! | TTGAATTTGTTTAGATCTTT+GGG | - | chr4_3:56855202-56855221 | Msa0650100:intron | 20.0% |
| !!! | ATATTTTACTCTTCTAGTTA+GGG | + | chr4_3:56855266-56855285 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCTTCATATGCAT+CGG | + | chr4_3:56855693-56855712 | None:intergenic | 20.0% |
| !! | GGTAACTGAAATTTATTTAA+GGG | + | chr4_3:56855732-56855751 | None:intergenic | 20.0% |
| !! | AGGTAACTGAAATTTATTTA+AGG | + | chr4_3:56855733-56855752 | None:intergenic | 20.0% |
| !!! | TTTTTTACCATTACATTTGA+CGG | + | chr4_3:56855856-56855875 | None:intergenic | 20.0% |
| !! | TCAAATGTAATGGTAAAAAA+TGG | - | chr4_3:56855856-56855875 | Msa0650100:intron | 20.0% |
| !! | ATTAATGAGAAAGAAAACAT+TGG | - | chr4_3:56856118-56856137 | Msa0650100:intron | 20.0% |
| !! | TTTAAATATTGTTTGTGCAT+TGG | - | chr4_3:56856191-56856210 | Msa0650100:intron | 20.0% |
| !!! | AGATTTTTGATATTTCATCT+CGG | - | chr4_3:56856222-56856241 | Msa0650100:intron | 20.0% |
| !!! | TTTCTTGAGTTTTTCTTTTT+TGG | - | chr4_3:56856536-56856555 | Msa0650100:intron | 20.0% |
| !! | TATGAAAATTAATCATCTCT+AGG | - | chr4_3:56856965-56856984 | Msa0650100:intron | 20.0% |
| !! | ATATGTAGACATAATCAATT+TGG | + | chr4_3:56857134-56857153 | None:intergenic | 20.0% |
| !! | AATTGATTATGTCTACATAT+AGG | - | chr4_3:56857134-56857153 | Msa0650100:intron | 20.0% |
| ! | AGAAAAAAAGAGATTGAATG+GGG | + | chr4_3:56851209-56851228 | None:intergenic | 25.0% |
| !!! | ATCTCTTTTTTTCTTAGTAC+AGG | - | chr4_3:56851215-56851234 | Msa0650100:intron | 25.0% |
| !!! | TCTCTTTTTTTCTTAGTACA+GGG | - | chr4_3:56851216-56851235 | Msa0650100:intron | 25.0% |
| ! | GGTTTGTAAAATTAGATACT+AGG | - | chr4_3:56851333-56851352 | Msa0650100:CDS | 25.0% |
| !!! | CTACATTCAATTTTGATGAA+GGG | - | chr4_3:56851376-56851395 | Msa0650100:CDS | 25.0% |
| !!! | TACATTCAATTTTGATGAAG+GGG | - | chr4_3:56851377-56851396 | Msa0650100:CDS | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | + | chr4_3:56852086-56852105 | None:intergenic | 25.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | - | chr4_3:56852151-56852170 | Msa0650100:intron | 25.0% |
| !!! | TAGTTTTAGCAAAGCATTTA+TGG | - | chr4_3:56852804-56852823 | Msa0650100:intron | 25.0% |
| ! | ATCATTGATATCCTAAAATG+TGG | - | chr4_3:56852857-56852876 | Msa0650100:intron | 25.0% |
| !! | TTTATATGCTTCCACATTTT+AGG | + | chr4_3:56852871-56852890 | None:intergenic | 25.0% |
| !!! | GATATTTTGATCGATTTGTA+TGG | + | chr4_3:56853050-56853069 | None:intergenic | 25.0% |
| ! | TCAAATTCAAATTGTCTCTA+TGG | + | chr4_3:56853421-56853440 | None:intergenic | 25.0% |
| ! | AGAGAATAAGAACATAATGT+GGG | - | chr4_3:56853490-56853509 | Msa0650100:intron | 25.0% |
| ! | GTCTAAAAGTTGTACTAAAA+TGG | - | chr4_3:56853530-56853549 | Msa0650100:intron | 25.0% |
| !!! | TCTTCAAACGTTTTTTCTTT+TGG | + | chr4_3:56853652-56853671 | None:intergenic | 25.0% |
| ! | GTCAGACTTTACTTATTTAT+TGG | - | chr4_3:56853705-56853724 | Msa0650100:intron | 25.0% |
| ! | TGTTGTTGGATATTTATGTT+TGG | + | chr4_3:56854027-56854046 | None:intergenic | 25.0% |
| ! | ATCAATTAAAATAGTCGGTT+TGG | - | chr4_3:56854251-56854270 | Msa0650100:intron | 25.0% |
| !!! | CAAACTTGTTTTTCATTGTT+TGG | + | chr4_3:56854311-56854330 | None:intergenic | 25.0% |
| ! | AAAAATATGATGGTTTGATC+AGG | - | chr4_3:56855084-56855103 | Msa0650100:intron | 25.0% |
| ! | AAACCCGAATTTATAAAAGT+CGG | - | chr4_3:56855125-56855144 | Msa0650100:intron | 25.0% |
| !! | AAACCCGACTTTTATAAATT+CGG | + | chr4_3:56855132-56855151 | None:intergenic | 25.0% |
| !! | GTTGAATTTGTTTAGATCTT+TGG | - | chr4_3:56855201-56855220 | Msa0650100:intron | 25.0% |
| !!! | TATTTTACTCTTCTAGTTAG+GGG | + | chr4_3:56855265-56855284 | None:intergenic | 25.0% |
| !!! | GATATTTTACTCTTCTAGTT+AGG | + | chr4_3:56855267-56855286 | None:intergenic | 25.0% |
| ! | AAATACTAAAATACTCCTAG+CGG | + | chr4_3:56855474-56855493 | None:intergenic | 25.0% |
| ! | ATGAAATTGTATGATCAACA+AGG | - | chr4_3:56855605-56855624 | Msa0650100:intron | 25.0% |
| ! | ACTGAAATTTATTTAAGGGT+TGG | + | chr4_3:56855728-56855747 | None:intergenic | 25.0% |
| ! | ATGAGATTATTAGTAAGCAT+TGG | + | chr4_3:56855912-56855931 | None:intergenic | 25.0% |
| !!! | AGTTTTTCTTTTTTGGTGAT+AGG | - | chr4_3:56856543-56856562 | Msa0650100:intron | 25.0% |
| !!! | AACGTTTATACTAACTTGTT+CGG | + | chr4_3:56856927-56856946 | None:intergenic | 25.0% |
| ! | GTTCATACATGTAAACATTA+AGG | + | chr4_3:56856997-56857016 | None:intergenic | 25.0% |
| ! | TCAAAGAAACTAAAAGATCT+GGG | - | chr4_3:56857502-56857521 | Msa0650100:CDS | 25.0% |
| !! | TTTGATGTACTATTTCTTCA+AGG | + | chr4_3:56857546-56857565 | None:intergenic | 25.0% |
| ! | AAGGTAAATAACCATAATCT+AGG | + | chr4_3:56857582-56857601 | None:intergenic | 25.0% |
| CCTTCATCAAAATTGAATGT+AGG | + | chr4_3:56851378-56851397 | None:intergenic | 30.0% | |
| !! | CCTACATTCAATTTTGATGA+AGG | - | chr4_3:56851375-56851394 | Msa0650100:CDS | 30.0% |
| !! | ACATTCAATTTTGATGAAGG+GGG | - | chr4_3:56851378-56851397 | Msa0650100:CDS | 30.0% |
| ACAATTTGATGCACAAGATA+TGG | - | chr4_3:56851426-56851445 | Msa0650100:CDS | 30.0% | |
| !! | CATACTTTAAAGTGTGTGTT+TGG | + | chr4_3:56851638-56851657 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | + | chr4_3:56851784-56851803 | None:intergenic | 30.0% | |
| ! | CAAGTTTAGAACACTATGAA+AGG | - | chr4_3:56851924-56851943 | Msa0650100:intron | 30.0% |
| !!! | TTTTGCGATATTTTTTTCGG+AGG | - | chr4_3:56852059-56852078 | Msa0650100:intron | 30.0% |
| !!! | TGAGTGCAGAAATTTTTTGT+AGG | - | chr4_3:56852182-56852201 | Msa0650100:CDS | 30.0% |
| !!! | GAGTGCAGAAATTTTTTGTA+GGG | - | chr4_3:56852183-56852202 | Msa0650100:CDS | 30.0% |
| AAGAAAAAAAGTGGCGTAAT+TGG | - | chr4_3:56852355-56852374 | Msa0650100:CDS | 30.0% | |
| !! | AATGTTAACTTGTGTCCTTA+AGG | + | chr4_3:56852671-56852690 | None:intergenic | 30.0% |
| TATAGTAGTACTACTACTTG+TGG | - | chr4_3:56852952-56852971 | Msa0650100:intron | 30.0% | |
| TAAAAGATGAAATGATGCCA+CGG | + | chr4_3:56852979-56852998 | None:intergenic | 30.0% | |
| TCAAATTGTCTCTATGGATT+TGG | + | chr4_3:56853415-56853434 | None:intergenic | 30.0% | |
| !! | AATTATTTCGGTGCAACTTT+TGG | - | chr4_3:56853457-56853476 | Msa0650100:intron | 30.0% |
| GAGAGAATAAGAACATAATG+TGG | - | chr4_3:56853489-56853508 | Msa0650100:intron | 30.0% | |
| !! | TTAACTTGGCGAAAAAGTTT+TGG | - | chr4_3:56853820-56853839 | Msa0650100:intron | 30.0% |
| TATCGTTTATCAGTTTCACA+TGG | + | chr4_3:56853882-56853901 | None:intergenic | 30.0% | |
| GTCATATGCAAATATGTTGT+TGG | + | chr4_3:56854041-56854060 | None:intergenic | 30.0% | |
| !! | TTTAATGGGTTGGTTTAGTT+CGG | - | chr4_3:56854205-56854224 | Msa0650100:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr4_3:56854429-56854448 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr4_3:56854430-56854449 | Msa0650100:intron | 30.0% |
| GTAGTGTGCAGATTATTAAT+TGG | - | chr4_3:56854560-56854579 | Msa0650100:intron | 30.0% | |
| TGTGCAGATTATTAATTGGA+GGG | - | chr4_3:56854564-56854583 | Msa0650100:intron | 30.0% | |
| ATCATTTCACGATATCTGTT+TGG | - | chr4_3:56854912-56854931 | Msa0650100:intron | 30.0% | |
| AACCCGAATTTATAAAAGTC+GGG | - | chr4_3:56855126-56855145 | Msa0650100:intron | 30.0% | |
| ! | AACCCGACTTTTATAAATTC+GGG | + | chr4_3:56855131-56855150 | None:intergenic | 30.0% |
| ! | ATTTGGTTTACACCTGAATA+AGG | - | chr4_3:56855157-56855176 | Msa0650100:intron | 30.0% |
| !!! | TCGATTTTTTGTCCTTATTC+AGG | + | chr4_3:56855172-56855191 | None:intergenic | 30.0% |
| !! | ATTTTACTCTTCTAGTTAGG+GGG | + | chr4_3:56855264-56855283 | None:intergenic | 30.0% |
| TAAATGACTAAAAAACCCTG+CGG | - | chr4_3:56855399-56855418 | Msa0650100:intron | 30.0% | |
| GTGTTAAGAAGAAATGAACA+AGG | + | chr4_3:56855577-56855596 | None:intergenic | 30.0% | |
| AATTGTATGATCAACAAGGT+CGG | - | chr4_3:56855609-56855628 | Msa0650100:intron | 30.0% | |
| !!! | AAGTGGTAGATTTTTGGTAA+TGG | - | chr4_3:56855645-56855664 | Msa0650100:intron | 30.0% |
| ATGAAACTCTATGATTGATC+AGG | - | chr4_3:56855818-56855837 | Msa0650100:intron | 30.0% | |
| TGAAATCCAATTCTGTGAAA+AGG | - | chr4_3:56856328-56856347 | Msa0650100:intron | 30.0% | |
| GAAATCCAATTCTGTGAAAA+GGG | - | chr4_3:56856329-56856348 | Msa0650100:intron | 30.0% | |
| ATTACTGCTAAAGATAGCAA+TGG | - | chr4_3:56856378-56856397 | Msa0650100:intron | 30.0% | |
| ! | TAATGGGATTGATCTTGTTT+CGG | - | chr4_3:56856621-56856640 | Msa0650100:intron | 30.0% |
| ATGTGTTTGTAATGAAAGCT+AGG | - | chr4_3:56856893-56856912 | Msa0650100:intron | 30.0% | |
| TGATGCACATTGAATATTCT+CGG | + | chr4_3:56857040-56857059 | None:intergenic | 30.0% | |
| TCCATGCTTAAAATTCAACA+CGG | - | chr4_3:56857088-56857107 | Msa0650100:intron | 30.0% | |
| ! | AGTTGGATTAGAATACTCTT+TGG | + | chr4_3:56857339-56857358 | None:intergenic | 30.0% |
| ! | TTCTTTGAGGAAATTTCAGT+AGG | + | chr4_3:56857490-56857509 | None:intergenic | 30.0% |
| !!! | CAGATCTTTTAGTTTCTTTG+AGG | + | chr4_3:56857503-56857522 | None:intergenic | 30.0% |
| CTCAAAGAAACTAAAAGATC+TGG | - | chr4_3:56857501-56857520 | Msa0650100:CDS | 30.0% | |
| ATTATGTGTTGCCTAGATTA+TGG | - | chr4_3:56857568-56857587 | Msa0650100:CDS | 30.0% | |
| GTAACACAATATTTGGCAGT+AGG | + | chr4_3:56851092-56851111 | None:intergenic | 35.0% | |
| ACTGCCAAATATTGTGTTAC+AGG | - | chr4_3:56851092-56851111 | Msa0650100:CDS | 35.0% | |
| TAGTACAGGGAGAAAGAATT+AGG | - | chr4_3:56851229-56851248 | Msa0650100:intron | 35.0% | |
| !! | CATTCAATTTTGATGAAGGG+GGG | - | chr4_3:56851379-56851398 | Msa0650100:CDS | 35.0% |
| ! | TACAAGGTCGCAATTTTGTA+GGG | + | chr4_3:56852243-56852262 | None:intergenic | 35.0% |
| ! | TTACAAGGTCGCAATTTTGT+AGG | + | chr4_3:56852242-56852261 | None:intergenic | 35.0% |
| AAGGAAGGACTAAACTTACA+AGG | - | chr4_3:56852227-56852246 | Msa0650100:CDS | 35.0% | |
| ! | TTACAAGGTCGCAATTTTGT+AGG | - | chr4_3:56852242-56852261 | Msa0650100:CDS | 35.0% |
| ! | TACAAGGTCGCAATTTTGTA+GGG | - | chr4_3:56852243-56852262 | Msa0650100:CDS | 35.0% |
| CCTTAAGGCACAAGTTTAAA+AGG | + | chr4_3:56852656-56852675 | None:intergenic | 35.0% | |
| ! | CCTTTTAAACTTGTGCCTTA+AGG | - | chr4_3:56852653-56852672 | Msa0650100:intron | 35.0% |
| AAAAGATGAAATGATGCCAC+GGG | + | chr4_3:56852978-56852997 | None:intergenic | 35.0% | |
| !!! | GGGAGTGAATGTTTTTTGTT+GGG | + | chr4_3:56853029-56853048 | None:intergenic | 35.0% |
| !!! | TGGGAGTGAATGTTTTTTGT+TGG | + | chr4_3:56853030-56853049 | None:intergenic | 35.0% |
| TACGTGAGTTAACTTACGTT+CGG | - | chr4_3:56853073-56853092 | Msa0650100:intron | 35.0% | |
| ATGTATGAGTTAACTTACGC+TGG | - | chr4_3:56853143-56853162 | Msa0650100:intron | 35.0% | |
| TGTATGAGTTAACTTACGCT+GGG | - | chr4_3:56853144-56853163 | Msa0650100:intron | 35.0% | |
| CAACATGGATGATTACTGTA+AGG | + | chr4_3:56854168-56854187 | None:intergenic | 35.0% | |
| CTTACAGTAATCATCCATGT+TGG | - | chr4_3:56854166-56854185 | Msa0650100:intron | 35.0% | |
| !! | GTTGGTTTAGTTCGGTTTTT+AGG | - | chr4_3:56854213-56854232 | Msa0650100:intron | 35.0% |
| GTGTGCAGATTATTAATTGG+AGG | - | chr4_3:56854563-56854582 | Msa0650100:intron | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4_3:56854664-56854683 | Msa0650100:intron | 35.0% |
| !!! | TCTGTTTGGCATGTTTTGAT+TGG | - | chr4_3:56854926-56854945 | Msa0650100:intron | 35.0% |
| AAAGTCGGGTTTGATTGATT+TGG | - | chr4_3:56855140-56855159 | Msa0650100:intron | 35.0% | |
| ! | GTTTAGATCTTTGGGTTCAT+CGG | - | chr4_3:56855210-56855229 | Msa0650100:intron | 35.0% |
| !! | TTTTACTCTTCTAGTTAGGG+GGG | + | chr4_3:56855263-56855282 | None:intergenic | 35.0% |
| AAAATATCCCTTCCCTTGAA+TGG | - | chr4_3:56855279-56855298 | Msa0650100:intron | 35.0% | |
| TGGTCCAACAAATACCAAAT+GGG | + | chr4_3:56855311-56855330 | None:intergenic | 35.0% | |
| ATGGTCCAACAAATACCAAA+TGG | + | chr4_3:56855312-56855331 | None:intergenic | 35.0% | |
| !!! | GTTGATGGGTTTTTAGCATA+TGG | + | chr4_3:56855331-56855350 | None:intergenic | 35.0% |
| TTCTGACATCCAATATGTCT+TGG | - | chr4_3:56855367-56855386 | Msa0650100:intron | 35.0% | |
| CTTGTGTTTCCAAGACATAT+TGG | + | chr4_3:56855379-56855398 | None:intergenic | 35.0% | |
| CTGGCTTATAACTAGAAAAC+CGG | + | chr4_3:56855438-56855457 | None:intergenic | 35.0% | |
| !!! | GTTTTCTAGTTATAAGCCAG+CGG | - | chr4_3:56855438-56855457 | Msa0650100:intron | 35.0% |
| ! | CAACACAAGTGGTAGATTTT+TGG | - | chr4_3:56855639-56855658 | Msa0650100:intron | 35.0% |
| GTGATTTCCGTCAAATGTAA+TGG | - | chr4_3:56855846-56855865 | Msa0650100:intron | 35.0% | |
| CAAGCATGTATCGAAATGAA+AGG | + | chr4_3:56855882-56855901 | None:intergenic | 35.0% | |
| ! | AACGCATTGATAATCATCGA+AGG | - | chr4_3:56856147-56856166 | Msa0650100:intron | 35.0% |
| ATAATTGACCCTGCAATCAA+AGG | - | chr4_3:56856279-56856298 | Msa0650100:intron | 35.0% | |
| TTATGGTTCCTTTGATTGCA+GGG | + | chr4_3:56856290-56856309 | None:intergenic | 35.0% | |
| TTTATGGTTCCTTTGATTGC+AGG | + | chr4_3:56856291-56856310 | None:intergenic | 35.0% | |
| ATTTCAAGCAAGATTTGAGC+AGG | + | chr4_3:56856314-56856333 | None:intergenic | 35.0% | |
| ! | AACAACCCTTTTCACAGAAT+TGG | + | chr4_3:56856337-56856356 | None:intergenic | 35.0% |
| CTAAAGATAGCAATGGAAAG+TGG | - | chr4_3:56856385-56856404 | Msa0650100:intron | 35.0% | |
| TGGCAAGATTCATCAACAAT+AGG | + | chr4_3:56856414-56856433 | None:intergenic | 35.0% | |
| ACACAGTGTCAGTTTGTATT+TGG | + | chr4_3:56856434-56856453 | None:intergenic | 35.0% | |
| AAATACAAACTGACACTGTG+TGG | - | chr4_3:56856433-56856452 | Msa0650100:intron | 35.0% | |
| TGAACAATGCTAGTAGTAGT+AGG | + | chr4_3:56856500-56856519 | None:intergenic | 35.0% | |
| GTACATTAGCAGTGAAAAAC+GGG | + | chr4_3:56856669-56856688 | None:intergenic | 35.0% | |
| GGTACATTAGCAGTGAAAAA+CGG | + | chr4_3:56856670-56856689 | None:intergenic | 35.0% | |
| AGCAGAACTTTAACACTTGA+AGG | + | chr4_3:56856691-56856710 | None:intergenic | 35.0% | |
| TATAAAGTCACCTGTTAGTG+AGG | + | chr4_3:56856716-56856735 | None:intergenic | 35.0% | |
| GCAGCAGAATTTGAACAAAT+TGG | - | chr4_3:56856738-56856757 | Msa0650100:intron | 35.0% | |
| TTGAATATTCTCGGGGAATT+CGG | + | chr4_3:56857031-56857050 | None:intergenic | 35.0% | |
| ATGCACATTGAATATTCTCG+GGG | + | chr4_3:56857038-56857057 | None:intergenic | 35.0% | |
| GATGCACATTGAATATTCTC+GGG | + | chr4_3:56857039-56857058 | None:intergenic | 35.0% | |
| CCATGCTTAAAATTCAACAC+GGG | - | chr4_3:56857089-56857108 | Msa0650100:intron | 35.0% | |
| GACATAATCAATTTGGTCAG+TGG | + | chr4_3:56857127-56857146 | None:intergenic | 35.0% | |
| CAATGCTCACATATTCTTGA+TGG | - | chr4_3:56857238-56857257 | Msa0650100:intron | 35.0% | |
| ATTCTAATCCAACTACGCTA+AGG | - | chr4_3:56857345-56857364 | Msa0650100:intron | 35.0% | |
| TTCCTACATATATATGCAGC+AGG | - | chr4_3:56857440-56857459 | Msa0650100:intron | 35.0% | |
| TTCCTGCTGCATATATATGT+AGG | + | chr4_3:56857445-56857464 | None:intergenic | 35.0% | |
| GAAGAGTCAGAAATATGACA+AGG | - | chr4_3:56857462-56857481 | Msa0650100:CDS | 35.0% | |
| AAGAAATGGAGGAAGCAATG+AGG | - | chr4_3:56851039-56851058 | Msa0650100:CDS | 40.0% | |
| GGCACCTGTAACACAATATT+TGG | + | chr4_3:56851099-56851118 | None:intergenic | 40.0% | |
| GTTGAAGCTCTTCTTCAAAG+AGG | - | chr4_3:56851143-56851162 | Msa0650100:CDS | 40.0% | |
| ATCTCTGACAGTAGCATGAA+CGG | + | chr4_3:56851174-56851193 | None:intergenic | 40.0% | |
| ATTGAATGGGGATACTAACC+AGG | + | chr4_3:56851197-56851216 | None:intergenic | 40.0% | |
| ATAGCTATGTCCATCCTAGT+TGG | + | chr4_3:56851406-56851425 | None:intergenic | 40.0% | |
| ACGTAAGTTAACTCACGTAG+AGG | + | chr4_3:56853072-56853091 | None:intergenic | 40.0% | |
| GTATGAGTTAACTTACGCTG+GGG | - | chr4_3:56853145-56853164 | Msa0650100:intron | 40.0% | |
| CTTATATCACGTTCGCTACA+TGG | + | chr4_3:56853237-56853256 | None:intergenic | 40.0% | |
| AACGTGATATAAGTCACGCT+GGG | - | chr4_3:56853244-56853263 | Msa0650100:intron | 40.0% | |
| CATGAGTGAGTTAATTCTCG+CGG | - | chr4_3:56853274-56853293 | Msa0650100:intron | 40.0% | |
| ATGAGTGAGTTAATTCTCGC+GGG | - | chr4_3:56853275-56853294 | Msa0650100:intron | 40.0% | |
| TACTAGAGCAGGGGTTTAAT+GGG | - | chr4_3:56854191-56854210 | Msa0650100:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr4_3:56854668-56854687 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr4_3:56854668-56854687 | Msa0650100:intron | 40.0% |
| ! | ATCTTTGGGTTCATCGGAAT+CGG | - | chr4_3:56855216-56855235 | Msa0650100:intron | 40.0% |
| CGGAATCGGATCATTTGATT+AGG | - | chr4_3:56855230-56855249 | Msa0650100:intron | 40.0% | |
| TTGTCATTGTCCAACAACCA+AGG | - | chr4_3:56855535-56855554 | Msa0650100:intron | 40.0% | |
| TGTCATTGTCCAACAACCAA+GGG | - | chr4_3:56855536-56855555 | Msa0650100:intron | 40.0% | |
| CTCTATGATTGATCAGGACT+CGG | - | chr4_3:56855824-56855843 | Msa0650100:intron | 40.0% | |
| ATTGCATTGAAGCTGCAACA+TGG | + | chr4_3:56856093-56856112 | None:intergenic | 40.0% | |
| GCAAGATTTGAGCAGGTTTA+TGG | + | chr4_3:56856307-56856326 | None:intergenic | 40.0% | |
| GAATACACAACCAAGTGGAT+GGG | - | chr4_3:56856455-56856474 | Msa0650100:intron | 40.0% | |
| ATGCTAGTAGTAGTAGGCTA+AGG | + | chr4_3:56856494-56856513 | None:intergenic | 40.0% | |
| ! | GTTATAACAAGCACTGTTGC+AGG | - | chr4_3:56856643-56856662 | Msa0650100:intron | 40.0% |
| TATGCTACAACTCTACAGCA+CGG | + | chr4_3:56856793-56856812 | None:intergenic | 40.0% | |
| TGCGAAAAATAGCAGTGTGT+AGG | + | chr4_3:56856822-56856841 | None:intergenic | 40.0% | |
| ! | CCCGTGTTGAATTTTAAGCA+TGG | + | chr4_3:56857092-56857111 | None:intergenic | 40.0% |
| ATCTGCTGTAAATGCACGAA+TGG | - | chr4_3:56857181-56857200 | Msa0650100:intron | 40.0% | |
| TCTGCTGTAAATGCACGAAT+GGG | - | chr4_3:56857182-56857201 | Msa0650100:intron | 40.0% | |
| ATGGAACATGCTAAAGCAGA+AGG | - | chr4_3:56857257-56857276 | Msa0650100:intron | 40.0% | |
| AACATGCTAAAGCAGAAGGT+AGG | - | chr4_3:56857261-56857280 | Msa0650100:intron | 40.0% | |
| AAGCTGTACACTGTCTAACT+TGG | - | chr4_3:56857301-56857320 | Msa0650100:intron | 40.0% | |
| AATGGAGGAAGCAATGAGGA+TGG | - | chr4_3:56851043-56851062 | Msa0650100:CDS | 45.0% | |
| ! | TATTGTGTTACAGGTGCCAC+AGG | - | chr4_3:56851101-56851120 | Msa0650100:CDS | 45.0% |
| ! | ATTGTGTTACAGGTGCCACA+GGG | - | chr4_3:56851102-56851121 | Msa0650100:CDS | 45.0% |
| CCATGAACCAATATACCCTG+TGG | + | chr4_3:56851120-56851139 | None:intergenic | 45.0% | |
| !! | CCACAGGGTATATTGGTTCA+TGG | - | chr4_3:56851117-56851136 | Msa0650100:CDS | 45.0% |
| TGTGTGTTTGGTTGTGTCGT+GGG | + | chr4_3:56851626-56851645 | None:intergenic | 45.0% | |
| AGTGGCGTAATTGGAGATTC+AGG | - | chr4_3:56852364-56852383 | Msa0650100:intron | 45.0% | |
| CAGCGTGAGTTAACTCATGT+AGG | + | chr4_3:56853114-56853133 | None:intergenic | 45.0% | |
| CTACATGAGTTAACTCACGC+TGG | - | chr4_3:56853112-56853131 | Msa0650100:intron | 45.0% | |
| TCACGTGAGTTAACTCATGC+AGG | + | chr4_3:56853208-56853227 | None:intergenic | 45.0% | |
| GAACGTGATATAAGTCACGC+TGG | - | chr4_3:56853243-56853262 | Msa0650100:intron | 45.0% | |
| CATGTTGGTGTACTAGAGCA+GGG | - | chr4_3:56854181-56854200 | Msa0650100:intron | 45.0% | |
| ATGTTGGTGTACTAGAGCAG+GGG | - | chr4_3:56854182-56854201 | Msa0650100:intron | 45.0% | |
| GTACTAGAGCAGGGGTTTAA+TGG | - | chr4_3:56854190-56854209 | Msa0650100:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr4_3:56854667-56854686 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4_3:56854667-56854686 | Msa0650100:intron | 45.0% |
| ATCCCTTCCCTTGAATGGTT+TGG | - | chr4_3:56855284-56855303 | Msa0650100:intron | 45.0% | |
| TCCCTTCCCTTGAATGGTTT+GGG | - | chr4_3:56855285-56855304 | Msa0650100:intron | 45.0% | |
| AATGGGCCCAAACCATTCAA+GGG | + | chr4_3:56855294-56855313 | None:intergenic | 45.0% | |
| AAATGGGCCCAAACCATTCA+AGG | + | chr4_3:56855295-56855314 | None:intergenic | 45.0% | |
| ! | TTGAATGGTTTGGGCCCATT+TGG | - | chr4_3:56855294-56855313 | Msa0650100:intron | 45.0% |
| TGGGCCCATTTGGTATTTGT+TGG | - | chr4_3:56855304-56855323 | Msa0650100:intron | 45.0% | |
| GCAACAGTCTGGTTGTTGAT+GGG | + | chr4_3:56855345-56855364 | None:intergenic | 45.0% | |
| AGCAACAGTCTGGTTGTTGA+TGG | + | chr4_3:56855346-56855365 | None:intergenic | 45.0% | |
| ATGTCAGAACAGCAACAGTC+TGG | + | chr4_3:56855356-56855375 | None:intergenic | 45.0% | |
| GTTCATTGTGAGCATTCCCT+TGG | + | chr4_3:56855555-56855574 | None:intergenic | 45.0% | |
| ! | TGCATCGGTCACGAATTTGA+CGG | + | chr4_3:56855678-56855697 | None:intergenic | 45.0% |
| CAGCGCGGAAAAATCTCAAT+TGG | + | chr4_3:56856015-56856034 | None:intergenic | 45.0% | |
| AGCTTCGATGAGGCAGTAAA+AGG | - | chr4_3:56856052-56856071 | Msa0650100:intron | 45.0% | |
| GAGGCAGTAAAAGGATGTGA+TGG | - | chr4_3:56856061-56856080 | Msa0650100:intron | 45.0% | |
| GTGTGGAATACACAACCAAG+TGG | - | chr4_3:56856450-56856469 | Msa0650100:intron | 45.0% | |
| GGAATACACAACCAAGTGGA+TGG | - | chr4_3:56856454-56856473 | Msa0650100:intron | 45.0% | |
| CCATTACTTACCCATCCACT+TGG | + | chr4_3:56856468-56856487 | None:intergenic | 45.0% | |
| CCAAGTGGATGGGTAAGTAA+TGG | - | chr4_3:56856465-56856484 | Msa0650100:intron | 45.0% | |
| CTGCTGTAAATGCACGAATG+GGG | - | chr4_3:56857183-56857202 | Msa0650100:intron | 45.0% | |
| GAGTGTTACCTTAGCGTAGT+TGG | + | chr4_3:56857356-56857375 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTATGTAAAAAAAA+AGG | - | chr4_3:56852472-56852491 | Msa0650100:intron | 5.0% |
| !!! | TATTTTCTTAAAAATAAAAA+AGG | - | chr4_3:56852539-56852558 | Msa0650100:CDS | 5.0% |
| !!! | TTTTTATGTAAAAAAAAAAA+AGG | - | chr4_3:56852583-56852602 | Msa0650100:CDS | 5.0% |
| !!! | ATATTTTTCTTTTTTTAAAA+GGG | + | chr4_3:56852935-56852954 | None:intergenic | 5.0% |
| !!! | TATATTTTTCTTTTTTTAAA+AGG | + | chr4_3:56852936-56852955 | None:intergenic | 5.0% |
| !!! | TAAATAATTCTTTTTTTTAA+AGG | + | chr4_3:56853767-56853786 | None:intergenic | 5.0% |
| !!! | TAAAAAAATTATTTTTTTGA+AGG | + | chr4_3:56854767-56854786 | None:intergenic | 5.0% |
| !! | AATAATATTAAAAAATATGA+TGG | - | chr4_3:56855074-56855093 | Msa0650100:intron | 5.0% |
| !! | TTAATATACATATTAAAAAA+AGG | + | chr4_3:56857382-56857401 | None:intergenic | 5.0% |
| ! | ACAGGTGCCACAGGGTATAT+TGG | - | chr4_3:56851110-56851129 | Msa0650100:CDS | 50.0% |
| CATGCTACTGTCAGAGATCC+TGG | - | chr4_3:56851176-56851195 | Msa0650100:intron | 50.0% | |
| GTGTGTGTTTGGTTGTGTCG+TGG | + | chr4_3:56851627-56851646 | None:intergenic | 50.0% | |
| CAGCGTGAGTTAACTCATGC+AGG | + | chr4_3:56853176-56853195 | None:intergenic | 50.0% | |
| GCATGAGTTAACTCACGCTG+TGG | - | chr4_3:56853176-56853195 | Msa0650100:intron | 50.0% | |
| CCTGCTCTAGTACACCAACA+TGG | + | chr4_3:56854183-56854202 | None:intergenic | 50.0% | |
| CCATGTTGGTGTACTAGAGC+AGG | - | chr4_3:56854180-56854199 | Msa0650100:intron | 50.0% | |
| ! | AGAGCAGGGGTTTAATGGGT+TGG | - | chr4_3:56854195-56854214 | Msa0650100:intron | 50.0% |
| TTGATCAGGTCTCGAGTGAC+TGG | - | chr4_3:56855098-56855117 | Msa0650100:intron | 50.0% | |
| GCCCAAACCATTCAAGGGAA+GGG | + | chr4_3:56855289-56855308 | None:intergenic | 50.0% | |
| TAGCGGTAGTTAACTACCGC+TGG | + | chr4_3:56855457-56855476 | None:intergenic | 50.0% | |
| AGCGGTAGTTAACTACCGCT+AGG | - | chr4_3:56855456-56855475 | Msa0650100:intron | 50.0% | |
| GTGAGCATTCCCTTGGTTGT+TGG | + | chr4_3:56855548-56855567 | None:intergenic | 50.0% | |
| TCGGTGTGACACAACACAAG+TGG | - | chr4_3:56855628-56855647 | Msa0650100:intron | 50.0% | |
| CGTTACACCTCCTGTCATTG+TGG | - | chr4_3:56855978-56855997 | Msa0650100:intron | 50.0% | |
| ACACCTCCTGTCATTGTGGA+AGG | - | chr4_3:56855982-56856001 | Msa0650100:intron | 50.0% | |
| CACCTCCTGTCATTGTGGAA+GGG | - | chr4_3:56855983-56856002 | Msa0650100:intron | 50.0% | |
| CTTCTTCGTGCAAATCAGCG+CGG | + | chr4_3:56856030-56856049 | None:intergenic | 50.0% | |
| CGAAGAAGGAAGCTTCGATG+AGG | - | chr4_3:56856042-56856061 | Msa0650100:intron | 50.0% | |
| GTTCTGCTGTCCTCACTAAC+AGG | - | chr4_3:56856703-56856722 | Msa0650100:intron | 50.0% | |
| TGATGAAGGGGGGACCAACT+AGG | - | chr4_3:56851389-56851408 | Msa0650100:CDS | 55.0% | |
| GTACTACTACTTGTGGCCCG+TGG | - | chr4_3:56852959-56852978 | Msa0650100:intron | 55.0% | |
| GGCCCAAACCATTCAAGGGA+AGG | + | chr4_3:56855290-56855309 | None:intergenic | 55.0% | |
| GGCAGCAGTTAACTACCGCA+GGG | + | chr4_3:56855417-56855436 | None:intergenic | 55.0% | |
| CTGCGGTAGTTAACTGCTGC+CGG | - | chr4_3:56855416-56855435 | Msa0650100:intron | 55.0% | |
| CACCCTTCCACAATGACAGG+AGG | + | chr4_3:56855988-56856007 | None:intergenic | 55.0% | |
| CTCCTGTCATTGTGGAAGGG+TGG | - | chr4_3:56855986-56856005 | Msa0650100:intron | 55.0% | |
| CACCACCCTTCCACAATGAC+AGG | + | chr4_3:56855991-56856010 | None:intergenic | 55.0% | |
| !! | CGCGCTGATTTGCACGAAGA+AGG | - | chr4_3:56856028-56856047 | Msa0650100:intron | 55.0% |
| GAAGGGGGGACCAACTAGGA+TGG | - | chr4_3:56851393-56851412 | Msa0650100:CDS | 60.0% | |
| CGGCAGCAGTTAACTACCGC+AGG | + | chr4_3:56855418-56855437 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 56851032 | 56857609 | 56851032 | ID=Msa0650100;Name=Msa0650100 |
| chr4_3 | mRNA | 56851032 | 56857609 | 56851032 | ID=Msa0650100-mRNA-1;Parent=Msa0650100;Name=Msa0650100-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|0.8|0.66|6|0|337 |
| chr4_3 | exon | 56857444 | 56857609 | 56857444 | ID=Msa0650100-mRNA-1:exon:14887;Parent=Msa0650100-mRNA-1 |
| chr4_3 | exon | 56852502 | 56852669 | 56852502 | ID=Msa0650100-mRNA-1:exon:14886;Parent=Msa0650100-mRNA-1 |
| chr4_3 | exon | 56852165 | 56852382 | 56852165 | ID=Msa0650100-mRNA-1:exon:14885;Parent=Msa0650100-mRNA-1 |
| chr4_3 | exon | 56851957 | 56852076 | 56851957 | ID=Msa0650100-mRNA-1:exon:14884;Parent=Msa0650100-mRNA-1 |
| chr4_3 | exon | 56851275 | 56851465 | 56851275 | ID=Msa0650100-mRNA-1:exon:14883;Parent=Msa0650100-mRNA-1 |
| chr4_3 | exon | 56851032 | 56851182 | 56851032 | ID=Msa0650100-mRNA-1:exon:14882;Parent=Msa0650100-mRNA-1 |
| chr4_3 | CDS | 56857444 | 56857609 | 56857444 | ID=Msa0650100-mRNA-1:cds;Parent=Msa0650100-mRNA-1 |
| chr4_3 | CDS | 56852502 | 56852669 | 56852502 | ID=Msa0650100-mRNA-1:cds;Parent=Msa0650100-mRNA-1 |
| chr4_3 | CDS | 56852165 | 56852382 | 56852165 | ID=Msa0650100-mRNA-1:cds;Parent=Msa0650100-mRNA-1 |
| chr4_3 | CDS | 56851957 | 56852076 | 56851957 | ID=Msa0650100-mRNA-1:cds;Parent=Msa0650100-mRNA-1 |
| chr4_3 | CDS | 56851275 | 56851465 | 56851275 | ID=Msa0650100-mRNA-1:cds;Parent=Msa0650100-mRNA-1 |
| chr4_3 | CDS | 56851032 | 56851182 | 56851032 | ID=Msa0650100-mRNA-1:cds;Parent=Msa0650100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
