AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0665830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0665830 MtrunA17_Chr4g0003981 97.983 1438 27 2 1 1437 1 1437 0.0 2921
Msa0665830 MtrunA17_Chr2g0332221 79.222 1439 285 6 1 1437 1 1427 0.0 2428
Msa0665830 MtrunA17_Chr2g0332241 79.167 1440 285 7 1 1437 1 1428 0.0 2421
Msa0665830 MtrunA17_Chr2g0332211 78.542 1440 296 6 1 1437 82 1511 0.0 2404
Msa0665830 MtrunA17_Chr4g0004021 90.383 1279 115 6 1 1277 1 1273 0.0 2341
Msa0665830 MtrunA17_Chr4g0004021 22.751 567 382 12 861 1380 166 723 1.22e-30 132
Msa0665830 MtrunA17_Chr4g0003971 75.956 1439 301 6 1 1437 1 1396 0.0 2253
Msa0665830 MtrunA17_Chr7g0262231 69.993 1453 403 7 16 1437 6 1456 0.0 2172
Msa0665830 MtrunA17_Chr7g0262241 70.153 1434 399 7 31 1437 22 1453 0.0 2150
Msa0665830 MtrunA17_Chr7g0261951 69.082 1449 419 7 16 1437 6 1452 0.0 2108
Msa0665830 MtrunA17_Chr7g0261971 68.538 1443 427 6 21 1437 7 1448 0.0 2107
Msa0665830 MtrunA17_Chr1g0148841 68.522 1455 432 7 1 1437 1 1447 0.0 2086
Msa0665830 MtrunA17_Chr7g0262221 67.894 1467 391 9 16 1437 7 1438 0.0 2084
Msa0665830 MtrunA17_Chr7g0261981 67.575 1431 427 7 16 1437 6 1408 0.0 2073
Msa0665830 MtrunA17_Chr3g0138261 68.082 1460 423 10 1 1437 1 1440 0.0 2067
Msa0665830 MtrunA17_Chr1g0148811 65.546 1428 481 5 17 1437 1 1424 0.0 1947
Msa0665830 MtrunA17_Chr7g0262251 64.261 1441 437 8 10 1433 24 1403 0.0 1945
Msa0665830 MtrunA17_Chr7g0262261 65.393 1413 448 6 40 1437 2 1388 0.0 1940
Msa0665830 MtrunA17_Chr7g0262261 52.326 86 39 1 1354 1437 1539 1624 3.10e-23 107
Msa0665830 MtrunA17_Chr7g0262261 58.333 84 34 1 33 115 1426 1509 1.10e-21 102
Msa0665830 MtrunA17_Chr7g0265981 61.368 1447 529 8 16 1437 16 1457 0.0 1849
Msa0665830 MtrunA17_Chr1g0198291 60.462 1429 540 7 31 1437 43 1468 0.0 1822
Msa0665830 MtrunA17_Chr7g0265971 60.557 1435 535 8 31 1437 32 1463 0.0 1821
Msa0665830 MtrunA17_Chr1g0171351 59.805 1433 540 7 39 1437 38 1468 0.0 1808
Msa0665830 MtrunA17_Chr4g0062871 58.989 1424 563 7 27 1437 3 1418 0.0 1778
Msa0665830 MtrunA17_Chr8g0340651 58.378 1480 562 7 10 1437 3 1480 0.0 1762
Msa0665830 MtrunA17_Chr2g0331081 58.592 1449 564 5 25 1437 18 1466 0.0 1754
Msa0665830 MtrunA17_Chr7g0265961 56.387 1456 545 10 3 1437 2 1388 0.0 1670
Msa0665830 MtrunA17_Chr0c20g0493841 53.857 1413 630 9 41 1437 25 1431 0.0 1560
Msa0665830 MtrunA17_Chr3g0104621 53.363 1368 571 7 117 1437 1 1348 0.0 1483
Msa0665830 MtrunA17_Chr5g0429871 54.575 1235 547 5 211 1437 17 1245 0.0 1394
Msa0665830 MtrunA17_Chr7g0262321 58.439 1179 429 8 271 1437 2 1131 0.0 1390
Msa0665830 MtrunA17_Chr4g0069211 54.151 1036 443 10 41 1062 25 1042 0.0 1106
Msa0665830 MtrunA17_Chr4g0069211 24.516 620 386 22 861 1427 162 752 1.59e-34 144
Msa0665830 MtrunA17_Chr7g0266001 60.954 671 255 2 115 780 6 674 0.0 871
Msa0665830 MtrunA17_Chr7g0266001 24.567 578 347 20 866 1380 63 614 1.67e-28 123
Msa0665830 MtrunA17_Chr7g0265991 63.360 625 215 2 827 1437 20 644 0.0 836
Msa0665830 MtrunA17_Chr7g0265991 22.981 644 409 18 167 780 54 640 2.92e-35 144
Msa0665830 MtrunA17_Chr7g0215001 66.755 376 103 1 1014 1367 1 376 0.0 546
Msa0665830 MtrunA17_Chr7g0215001 20.506 395 257 11 352 709 1 375 7.39e-12 68.9
Msa0665830 MtrunA17_Chr4g0069221 50.000 376 186 1 1064 1437 1 376 1.14e-132 414
Msa0665830 MtrunA17_Chr4g0069221 21.922 333 230 10 404 724 3 317 1.30e-11 68.2
Msa0665830 MtrunA17_Chr6g0472481 76.518 247 46 1 854 1088 1 247 4.15e-126 392
Msa0665830 MtrunA17_Chr6g0472481 26.068 234 140 4 167 400 8 208 1.73e-14 75.5
Msa0665830 MtrunA17_Chr4g0004001 88.439 173 20 0 1265 1437 16 188 1.85e-105 332
Msa0665830 MtrunA17_Chr7g0262331 58.373 209 80 5 41 244 2 208 7.10e-73 241
Msa0665830 MtrunA17_Chr7g0238421 50.000 260 89 4 874 1133 12 230 1.02e-67 228
Msa0665830 MtrunA17_Chr1g0208391 28.090 534 343 10 866 1378 93 606 4.54e-58 215
Msa0665830 MtrunA17_Chr1g0208391 34.495 287 137 9 165 441 86 331 1.40e-35 146
Msa0665830 MtrunA17_Chr1g0176441 27.411 591 364 15 833 1385 143 706 8.38e-55 205
Msa0665830 MtrunA17_Chr1g0176441 25.383 587 362 14 143 701 143 681 7.18e-39 156
Msa0665830 MtrunA17_Chr1g0198931 27.063 606 395 17 786 1363 25 611 1.24e-54 204
Msa0665830 MtrunA17_Chr1g0198931 26.324 623 369 23 120 707 42 609 7.03e-39 155
Msa0665830 MtrunA17_Chr1g0213091 23.645 609 400 10 829 1383 66 663 1.52e-54 204
Msa0665830 MtrunA17_Chr1g0213091 23.272 593 372 12 164 721 114 658 1.43e-35 146
Msa0665830 MtrunA17_Chr4g0050221 28.649 555 354 14 861 1392 26 561 1.35e-53 199
Msa0665830 MtrunA17_Chr4g0050221 24.204 628 414 16 162 774 21 601 6.72e-36 146
Msa0665830 MtrunA17_Chr1g0176451 28.028 578 360 15 839 1386 1 552 4.63e-53 197
Msa0665830 MtrunA17_Chr1g0176451 26.476 559 354 13 158 701 10 526 1.32e-39 156
Msa0665830 MtrunA17_Chr8g0359931 27.574 573 370 16 836 1389 34 580 5.06e-53 198
Msa0665830 MtrunA17_Chr8g0359931 25.352 568 337 18 165 711 59 560 3.51e-37 150
Msa0665830 MtrunA17_Chr5g0408061 28.063 506 308 14 815 1292 21 498 7.49e-53 197
Msa0665830 MtrunA17_Chr5g0408061 26.876 573 323 19 167 707 60 568 4.94e-41 162
Msa0665830 MtrunA17_Chr2g0316301 28.932 515 349 8 866 1379 73 571 1.16e-52 197
Msa0665830 MtrunA17_Chr2g0316301 24.960 629 376 15 166 771 67 622 1.94e-42 166
Msa0665830 MtrunA17_Chr4g0050251 28.046 517 331 12 866 1359 73 571 1.25e-52 197
Msa0665830 MtrunA17_Chr4g0050251 23.565 662 444 14 162 808 63 677 5.30e-43 168
Msa0665830 MtrunA17_Chr4g0039251 28.676 544 333 15 866 1377 93 613 3.97e-51 194
Msa0665830 MtrunA17_Chr4g0039251 25.515 631 400 15 172 778 93 677 5.36e-43 169
Msa0665830 MtrunA17_Chr4g0039261 27.586 580 360 17 866 1406 51 609 1.33e-50 191
Msa0665830 MtrunA17_Chr4g0039261 26.275 647 375 20 172 778 51 635 3.83e-46 178
Msa0665830 MtrunA17_Chr1g0200651 26.783 631 393 16 801 1384 3 611 1.94e-50 191
Msa0665830 MtrunA17_Chr1g0200651 25.887 564 344 19 168 711 86 595 4.34e-36 147
Msa0665830 MtrunA17_Chr4g0050291 27.413 518 335 12 866 1359 50 550 1.23e-48 185
Msa0665830 MtrunA17_Chr4g0050291 24.165 629 404 15 171 776 49 627 1.29e-40 160
Msa0665830 MtrunA17_Chr8g0390471 77.000 100 23 0 865 964 4 103 1.62e-48 168
Msa0665830 MtrunA17_Chr7g0263351 24.357 583 390 10 836 1378 82 653 4.44e-48 185
Msa0665830 MtrunA17_Chr7g0263351 22.561 656 420 11 172 778 127 743 5.36e-34 141
Msa0665830 MtrunA17_Chr6g0477811 25.646 542 334 13 866 1363 66 582 1.24e-47 182
Msa0665830 MtrunA17_Chr6g0477811 25.228 658 426 14 140 776 34 646 3.58e-46 178
Msa0665830 MtrunA17_Chr7g0267971 27.116 579 375 12 833 1382 132 692 1.37e-47 183
Msa0665830 MtrunA17_Chr7g0267971 26.306 555 340 15 172 701 160 670 7.44e-37 150
Msa0665830 MtrunA17_Chr1g0202431 24.615 520 361 12 866 1379 50 544 1.52e-47 181
Msa0665830 MtrunA17_Chr1g0202431 22.632 623 393 14 172 776 50 601 7.94e-36 145
Msa0665830 MtrunA17_Chr2g0318061 33.431 341 210 9 838 1176 2 327 6.19e-47 173
Msa0665830 MtrunA17_Chr2g0318061 29.668 391 221 12 168 551 27 370 1.74e-37 145
Msa0665830 MtrunA17_Chr8g0384391 24.908 546 370 11 866 1386 56 586 1.45e-45 176
Msa0665830 MtrunA17_Chr8g0384391 24.460 695 429 17 116 778 5 635 3.50e-44 171
Msa0665830 MtrunA17_Chr4g0026731 25.984 508 330 12 908 1378 22 520 1.46e-43 169
Msa0665830 MtrunA17_Chr4g0026731 23.675 604 387 16 205 774 12 575 1.83e-34 141
Msa0665830 MtrunA17_Chr1g0199471 35.656 244 151 2 866 1109 517 754 1.61e-43 173
Msa0665830 MtrunA17_Chr1g0199471 32.890 301 160 8 145 437 484 750 4.75e-33 139
Msa0665830 MtrunA17_Chr3g0102731 29.200 500 310 15 836 1303 54 541 1.94e-43 168
Msa0665830 MtrunA17_Chr3g0102731 32.482 274 146 8 172 443 98 334 4.80e-31 130
Msa0665830 MtrunA17_Chr7g0264441 25.686 510 281 14 866 1299 279 766 2.11e-43 172
Msa0665830 MtrunA17_Chr7g0264441 32.384 281 154 7 163 441 270 516 3.00e-30 130
Msa0665830 MtrunA17_Chr5g0446901 27.237 503 336 11 866 1348 109 601 2.84e-42 165
Msa0665830 MtrunA17_Chr5g0446901 30.640 297 167 7 151 443 88 349 1.43e-30 129
Msa0665830 MtrunA17_Chr5g0429861 44.560 193 97 3 31 213 18 210 2.93e-42 156
Msa0665830 MtrunA17_Chr4g0065231 23.267 649 420 16 146 776 46 634 5.20e-42 165
Msa0665830 MtrunA17_Chr4g0065231 24.952 525 367 13 866 1381 75 581 1.73e-37 151
Msa0665830 MtrunA17_Chr8g0393191 32.867 286 182 5 837 1121 41 317 2.50e-40 161
Msa0665830 MtrunA17_Chr8g0393191 25.581 301 179 6 167 457 64 329 2.83e-23 107
Msa0665830 MtrunA17_Chr8g0393191 25.893 224 160 4 1157 1380 518 735 3.01e-16 84.7
Msa0665830 MtrunA17_Chr1g0180971 33.969 262 167 2 863 1124 410 665 4.92e-40 160
Msa0665830 MtrunA17_Chr1g0180971 31.673 281 156 6 163 441 404 650 1.16e-29 127
Msa0665830 MtrunA17_Chr3g0130331 23.713 544 377 11 866 1386 58 586 1.13e-39 157
Msa0665830 MtrunA17_Chr3g0130331 23.041 638 400 16 172 778 58 635 6.43e-39 155
Msa0665830 MtrunA17_Chr4g0028621 36.475 244 149 2 866 1109 507 744 8.61e-39 158
Msa0665830 MtrunA17_Chr4g0028621 32.740 281 153 6 163 441 498 744 8.56e-27 119
Msa0665830 MtrunA17_Chr5g0411621 30.606 330 209 7 839 1160 25 342 1.88e-38 155
Msa0665830 MtrunA17_Chr5g0411621 26.950 282 170 5 167 447 46 292 2.06e-27 120
Msa0665830 MtrunA17_Chr5g0411621 22.222 234 169 4 1148 1378 441 664 4.26e-13 74.3
Msa0665830 MtrunA17_Chr4g0050201 26.582 474 308 13 908 1359 5 460 2.25e-38 152
Msa0665830 MtrunA17_Chr4g0050201 22.509 582 381 14 211 774 1 530 2.22e-26 115
Msa0665830 MtrunA17_Chr4g0050261 22.545 723 457 16 162 825 63 741 1.05e-37 152
Msa0665830 MtrunA17_Chr4g0050261 38.318 214 125 4 866 1075 73 283 7.13e-35 144
Msa0665830 MtrunA17_Chr4g0050261 21.875 256 192 4 1125 1378 383 632 1.07e-14 79.3
Msa0665830 MtrunA17_Chr4g0039231 26.236 526 298 15 927 1377 20 530 5.70e-36 146
Msa0665830 MtrunA17_Chr4g0039231 35.349 215 104 5 234 446 20 201 9.81e-30 127
Msa0665830 MtrunA17_Chr2g0327241 23.885 628 395 21 791 1378 62 646 3.07e-28 122
Msa0665830 MtrunA17_Chr2g0327241 23.451 597 372 19 158 726 112 651 3.16e-27 119
Msa0665830 MtrunA17_Chr8g0390461 45.528 123 60 2 701 816 2 124 1.14e-27 110
Msa0665830 MtrunA17_Chr8g0390481 85.714 56 7 1 996 1050 7 62 2.66e-24 97.8
Msa0665830 MtrunA17_Chr3g0093331 31.720 186 123 4 885 1067 17 201 3.94e-21 94.7
Msa0665830 MtrunA17_Chr3g0093331 26.104 249 151 3 194 441 20 236 1.63e-20 93.2
Msa0665830 MtrunA17_Chr7g0266011 42.268 97 51 1 31 122 38 134 2.43e-20 89.0
Msa0665830 MtrunA17_Chr8g0390451 48.718 78 38 1 235 310 9 86 2.40e-18 81.6
Msa0665830 MtrunA17_Chr4g0047831 37.805 82 51 0 983 1064 1 82 2.85e-12 64.3
Msa0665830 MtrunA17_Chr7g0238411 36.364 88 45 2 605 692 27 103 1.45e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0665830 AT1G15520.1 72.222 1440 380 5 1 1437 1 1423 0.0 2206
Msa0665830 AT1G15520.2 73.013 1271 323 5 1 1268 1 1254 0.0 1952
Msa0665830 AT1G15520.2 23.520 625 395 19 861 1425 164 765 1.11e-35 149
Msa0665830 AT2G36380.1 61.388 1427 518 8 29 1437 42 1453 0.0 1849
Msa0665830 AT1G66950.1 60.563 1420 540 6 29 1437 44 1454 0.0 1843
Msa0665830 AT1G15210.1 59.903 1449 546 8 8 1437 10 1442 0.0 1792
Msa0665830 AT2G26910.1 59.324 1421 565 7 27 1437 3 1420 0.0 1779
Msa0665830 AT3G16340.1 59.844 1412 536 6 37 1437 25 1416 0.0 1775
Msa0665830 AT1G59870.1 59.488 1444 540 9 31 1437 34 1469 0.0 1774
Msa0665830 AT3G16340.2 59.561 1412 535 7 37 1437 25 1411 0.0 1760
Msa0665830 AT3G30842.1 56.655 1405 578 8 47 1437 31 1418 0.0 1662
Msa0665830 AT2G29940.1 54.208 1426 615 7 31 1437 20 1426 0.0 1610
Msa0665830 AT3G53480.1 51.880 1436 673 9 12 1437 23 1450 0.0 1543
Msa0665830 AT2G37280.1 51.280 1406 664 9 42 1437 19 1413 0.0 1528
Msa0665830 AT2G37280.3 50.314 1435 663 10 42 1437 19 1442 0.0 1514
Msa0665830 AT2G37280.2 52.237 1319 611 8 42 1352 19 1326 0.0 1455
Msa0665830 AT2G37280.2 25.786 636 393 22 854 1429 140 756 1.33e-37 155
Msa0665830 AT4G15230.3 49.644 1404 671 10 41 1437 26 1400 0.0 1437
Msa0665830 AT4G15230.1 49.644 1404 671 10 41 1437 26 1400 0.0 1437
Msa0665830 AT4G15215.9 49.501 1402 672 11 43 1437 22 1394 0.0 1436
Msa0665830 AT4G15215.4 49.501 1402 672 11 43 1437 22 1394 0.0 1436
Msa0665830 AT4G15215.11 49.501 1402 672 11 43 1437 25 1397 0.0 1436
Msa0665830 AT4G15215.5 49.501 1402 672 11 43 1437 22 1394 0.0 1436
Msa0665830 AT4G15215.3 49.501 1402 672 11 43 1437 22 1394 0.0 1436
Msa0665830 AT4G15215.2 49.501 1402 672 11 43 1437 22 1394 0.0 1436
Msa0665830 AT4G15233.1 49.112 1407 672 10 40 1437 21 1392 0.0 1434
Msa0665830 AT4G15236.1 48.624 1417 684 10 30 1437 9 1390 0.0 1425
Msa0665830 AT4G15215.8 49.144 1402 670 12 43 1437 22 1387 0.0 1417
Msa0665830 AT4G15215.10 49.144 1402 670 12 43 1437 22 1387 0.0 1417
Msa0665830 AT4G15215.6 49.144 1402 670 12 43 1437 22 1387 0.0 1417
Msa0665830 AT4G15215.1 49.144 1402 670 12 43 1437 25 1390 0.0 1417
Msa0665830 AT4G15215.7 49.144 1402 670 12 43 1437 22 1387 0.0 1417
Msa0665830 AT4G15233.3 49.817 1365 647 8 76 1437 1 1330 0.0 1414
Msa0665830 AT4G15233.6 49.817 1365 647 8 76 1437 1 1330 0.0 1414
Msa0665830 AT2G37280.4 52.305 1258 586 6 184 1437 8 1255 0.0 1412
Msa0665830 AT4G15233.7 48.614 1407 661 11 40 1437 21 1374 0.0 1407
Msa0665830 AT4G15233.8 48.472 1407 672 11 40 1437 21 1383 0.0 1406
Msa0665830 AT4G15230.4 50.185 1349 639 9 93 1437 2 1321 0.0 1404
Msa0665830 AT4G15233.2 49.018 1375 635 10 40 1383 21 1360 0.0 1390
Msa0665830 AT4G15230.2 50.340 1323 619 10 41 1354 26 1319 0.0 1369
Msa0665830 AT4G15230.2 24.956 569 361 17 861 1378 151 704 1.59e-37 154
Msa0665830 AT4G15233.5 48.242 711 342 5 76 785 1 686 0.0 704
Msa0665830 AT4G15233.5 54.101 573 261 1 867 1437 677 1249 0.0 666
Msa0665830 AT4G15233.5 26.399 572 360 17 863 1394 90 640 2.94e-38 157
Msa0665830 AT4G15233.5 23.519 557 362 13 181 724 685 1190 1.16e-36 152
Msa0665830 AT4G15233.4 48.242 711 342 5 76 785 1 686 0.0 704
Msa0665830 AT4G15233.4 54.101 573 261 1 867 1437 677 1249 0.0 666
Msa0665830 AT4G15233.4 26.399 572 360 17 863 1394 90 640 2.94e-38 157
Msa0665830 AT4G15233.4 23.519 557 362 13 181 724 685 1190 1.16e-36 152
Msa0665830 AT2G01320.1 29.190 531 341 10 866 1378 90 603 1.03e-62 229
Msa0665830 AT2G01320.1 25.539 603 372 15 165 747 83 628 6.73e-39 157
Msa0665830 AT2G01320.4 29.190 531 341 10 866 1378 90 603 1.03e-62 229
Msa0665830 AT2G01320.4 25.539 603 372 15 165 747 83 628 6.73e-39 157
Msa0665830 AT2G01320.2 29.190 531 341 10 866 1378 90 603 1.09e-62 229
Msa0665830 AT2G01320.2 25.207 603 374 14 165 747 83 628 7.89e-39 156
Msa0665830 AT2G01320.3 29.190 531 341 10 866 1378 90 603 1.17e-62 229
Msa0665830 AT2G01320.3 25.207 603 374 14 165 747 83 628 8.46e-39 156
Msa0665830 AT2G01320.8 29.026 534 344 10 866 1381 90 606 1.36e-62 227
Msa0665830 AT2G01320.8 25.427 586 357 16 165 728 83 610 4.93e-39 156
Msa0665830 AT2G01320.5 29.026 534 344 10 866 1381 90 606 1.36e-62 227
Msa0665830 AT2G01320.5 25.427 586 357 16 165 728 83 610 4.93e-39 156
Msa0665830 AT3G55100.1 25.000 584 405 11 832 1396 15 584 3.91e-58 214
Msa0665830 AT3G55100.1 23.744 577 366 18 165 721 44 566 6.60e-35 144
Msa0665830 AT3G55100.2 25.000 584 405 11 832 1396 15 584 3.91e-58 214
Msa0665830 AT3G55100.2 23.744 577 366 18 165 721 44 566 6.60e-35 144
Msa0665830 AT2G37360.1 25.543 599 399 11 836 1401 95 679 8.24e-56 209
Msa0665830 AT2G37360.1 23.242 654 411 13 172 774 133 746 1.55e-37 152
Msa0665830 AT3G55130.1 24.768 646 414 17 778 1383 21 634 9.50e-56 208
Msa0665830 AT3G55130.1 24.419 602 373 16 171 744 98 645 1.05e-33 140
Msa0665830 AT2G01320.7 30.667 450 277 10 866 1297 90 522 6.32e-55 201
Msa0665830 AT2G01320.7 34.965 286 141 8 165 443 83 330 1.96e-38 152
Msa0665830 AT2G01320.6 30.667 450 277 10 866 1297 90 522 6.32e-55 201
Msa0665830 AT2G01320.6 34.965 286 141 8 165 443 83 330 1.96e-38 152
Msa0665830 AT3G55090.1 22.900 607 411 9 836 1401 70 660 2.74e-54 204
Msa0665830 AT3G55090.1 23.589 691 388 18 164 776 99 727 4.91e-33 138
Msa0665830 AT5G06530.2 27.375 621 374 14 833 1415 151 732 8.40e-54 203
Msa0665830 AT5G06530.2 25.725 552 347 15 172 701 179 689 1.85e-36 149
Msa0665830 AT5G06530.1 27.375 621 374 14 833 1415 151 732 8.40e-54 203
Msa0665830 AT5G06530.1 25.725 552 347 15 172 701 179 689 1.85e-36 149
Msa0665830 AT3G53510.1 27.156 545 350 12 865 1383 125 648 5.50e-53 200
Msa0665830 AT3G53510.1 24.735 566 362 13 172 721 126 643 4.75e-32 135
Msa0665830 AT1G71960.1 28.964 618 363 20 818 1386 12 602 8.94e-53 198
Msa0665830 AT1G71960.1 24.603 630 411 16 164 776 75 657 1.11e-37 152
Msa0665830 AT1G53270.1 25.651 538 374 9 849 1381 31 547 9.80e-53 196
Msa0665830 AT1G53270.1 25.366 615 364 14 163 754 41 583 5.41e-40 158
Msa0665830 AT4G27420.1 26.995 589 391 14 835 1404 33 601 1.34e-52 197
Msa0665830 AT4G27420.1 26.970 571 355 15 147 701 33 557 2.21e-38 154
Msa0665830 AT5G06530.3 27.899 552 339 11 833 1348 151 679 1.70e-52 197
Msa0665830 AT5G06530.3 25.926 540 337 15 172 689 179 677 2.12e-35 145
Msa0665830 AT3G55110.1 24.429 569 398 11 836 1383 60 617 1.79e-52 198
Msa0665830 AT3G55110.1 24.814 673 416 20 73 721 6 612 3.75e-36 148
Msa0665830 AT1G31770.1 27.841 528 338 13 785 1292 2 506 2.95e-52 196
Msa0665830 AT1G31770.1 26.842 570 359 14 166 726 75 595 7.40e-44 171
Msa0665830 AT3G21090.1 26.351 592 376 12 866 1415 45 618 7.82e-52 196
Msa0665830 AT3G21090.1 25.117 641 386 15 172 776 45 627 5.01e-44 172
Msa0665830 AT3G25620.2 28.546 571 354 18 822 1359 49 598 9.85e-52 195
Msa0665830 AT3G25620.2 27.273 561 337 18 167 707 94 603 7.24e-41 162
Msa0665830 AT5G13580.1 24.185 583 396 10 836 1383 65 636 1.25e-51 196
Msa0665830 AT5G13580.1 22.667 600 395 12 162 744 100 647 7.42e-30 128
Msa0665830 AT2G39350.1 23.116 597 399 10 836 1383 64 649 1.44e-51 196
Msa0665830 AT2G39350.1 23.900 682 401 17 164 776 101 733 1.01e-33 140
Msa0665830 AT1G17840.1 28.411 535 328 14 866 1363 69 585 8.79e-51 193
Msa0665830 AT1G17840.1 28.288 555 338 15 172 711 69 578 1.53e-41 164
Msa0665830 AT1G51500.1 28.333 540 342 12 866 1377 44 566 3.37e-48 185
Msa0665830 AT1G51500.1 25.796 628 400 13 172 776 44 628 1.71e-46 179
Msa0665830 AT5G06530.4 27.291 502 311 9 883 1348 1 484 6.04e-47 177
Msa0665830 AT5G06530.4 25.430 523 327 15 189 689 1 482 2.16e-33 136
Msa0665830 AT2G13610.1 25.599 543 367 13 866 1386 62 589 8.24e-47 180
Msa0665830 AT2G13610.1 23.333 630 414 13 112 721 1 581 1.84e-38 154
Msa0665830 AT3G25620.1 31.807 415 236 15 822 1203 49 449 1.99e-45 172
Msa0665830 AT3G25620.1 35.764 288 145 10 167 450 94 345 3.39e-38 150
Msa0665830 AT5G52860.1 25.338 517 345 12 866 1379 44 522 3.07e-44 171
Msa0665830 AT5G52860.1 21.914 648 402 16 147 776 19 580 9.74e-31 130
Msa0665830 AT1G53390.1 30.816 331 205 4 779 1109 454 760 1.25e-43 174
Msa0665830 AT1G53390.1 30.961 281 158 6 163 441 514 760 3.04e-30 130
Msa0665830 AT3G13220.1 26.766 538 334 16 866 1372 106 614 2.83e-42 167
Msa0665830 AT3G13220.1 31.868 273 149 7 172 443 106 342 4.52e-29 125
Msa0665830 AT4G25750.1 23.314 519 355 14 866 1379 30 510 7.21e-42 164
Msa0665830 AT4G25750.1 21.725 626 392 13 162 771 20 563 1.74e-31 132
Msa0665830 AT2G37010.2 33.935 277 165 4 845 1109 467 737 2.72e-40 163
Msa0665830 AT2G37010.2 32.971 276 149 6 163 436 491 732 6.36e-31 133
Msa0665830 AT2G37010.1 33.935 277 165 4 845 1109 467 737 2.72e-40 163
Msa0665830 AT2G37010.1 32.971 276 149 6 163 436 491 732 6.36e-31 133
Msa0665830 AT1G51460.1 24.645 633 413 13 172 778 30 624 3.44e-37 151
Msa0665830 AT1G51460.1 39.048 210 124 3 866 1074 30 236 1.78e-32 136
Msa0665830 AT1G51460.1 26.500 200 137 4 1179 1377 370 560 2.22e-12 72.4
Msa0665830 AT5G60740.1 35.656 244 151 2 866 1109 515 752 4.89e-37 152
Msa0665830 AT5G60740.1 32.384 281 154 6 163 441 506 752 7.66e-27 119
Msa0665830 AT5G19410.2 24.376 521 360 13 866 1378 75 569 2.43e-36 147
Msa0665830 AT5G19410.2 23.377 616 385 13 172 771 75 619 1.69e-34 142
Msa0665830 AT5G19410.1 24.376 521 360 13 866 1378 66 560 2.93e-36 147
Msa0665830 AT5G19410.1 23.377 616 385 13 172 771 66 610 1.95e-34 142
Msa0665830 AT2G28070.2 24.090 577 373 16 166 724 127 656 1.17e-30 131
Msa0665830 AT2G28070.2 22.340 658 447 21 783 1405 53 681 3.76e-28 123
Msa0665830 AT2G28070.1 24.090 577 373 16 166 724 127 656 1.17e-30 131
Msa0665830 AT2G28070.1 22.340 658 447 21 783 1405 53 681 3.76e-28 123

Find 327 sgRNAs with CRISPR-Local

Find 493 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATTCCACTTACATCTTTA+AGG 0.054816 4_4:-5703283 None:intergenic
ATTCTCTGATTCCATGATTT+TGG 0.156341 4_4:-5709544 None:intergenic
CAATATGTTCACATTCTTAA+TGG 0.184649 4_4:+5704458 Msa0665830:CDS
GCTTTAAATACTAACCTTTC+TGG 0.187300 4_4:-5707157 None:intergenic
CATTGTGTCCTCCAGGTATC+TGG 0.218800 4_4:+5703580 Msa0665830:intron
TCCAATGCTTGGCTTGCTTA+TGG 0.218820 4_4:+5708176 Msa0665830:CDS
GTAGTTATGATTATGTTTAA+TGG 0.223437 4_4:+5705256 Msa0665830:CDS
TTTCTCACCTATTACGTAAT+AGG 0.226901 4_4:+5705424 Msa0665830:CDS
CGGAAAGACCACACTTCTTT+TGG 0.237237 4_4:+5703349 Msa0665830:CDS
GCTGGTGGATTTGGGGTTAC+TGG 0.237327 4_4:+5706015 Msa0665830:CDS
ATGATGAAGAAGCTCTTAAA+TGG 0.238632 4_4:+5702571 Msa0665830:CDS
TTATGCTACTTCACCTTCTA+TGG 0.241083 4_4:+5709202 Msa0665830:CDS
CAAAAGAAGTGTGGTCTTTC+CGG 0.247934 4_4:-5703348 None:intergenic
AAGTTCCCTTGGTTCAAATT+TGG 0.252771 4_4:+5709835 Msa0665830:three_prime_UTR
TGATGTTTGGAACAATATTC+TGG 0.253712 4_4:+5708272 Msa0665830:CDS
CTGATAAACCAAATGGCTTC+TGG 0.254805 4_4:+5705585 Msa0665830:CDS
AACTACTTTAATGGATGTTT+TGG 0.255523 4_4:+5706945 Msa0665830:CDS
GAATTCATAAGAAGTTATTT+TGG 0.260338 4_4:+5709579 Msa0665830:CDS
TACGCGGTAATTCAACTTCT+TGG 0.263384 4_4:-5706498 None:intergenic
CAATCCATTGAGAAACTCTT+TGG 0.265608 4_4:+5707320 Msa0665830:CDS
CCATTCCTCTTCTCTCTCTT+TGG 0.265883 4_4:-5706647 None:intergenic
AAGCTTCGGCCTCAACATTT+AGG 0.267035 4_4:-5703059 None:intergenic
TATACTGCTGTTCTCTTCCT+TGG 0.274793 4_4:+5708453 Msa0665830:CDS
ATATCAAAAGCTGGTGGATT+TGG 0.279555 4_4:+5706006 Msa0665830:CDS
AACTCTTTGGTTGGTTTGCC+TGG 0.281969 4_4:+5707333 Msa0665830:CDS
ATGATTGTGGCCAACACATT+TGG 0.284790 4_4:+5705642 Msa0665830:CDS
TATCAAAAGCTGGTGGATTT+GGG 0.286764 4_4:+5706007 Msa0665830:CDS
GGACTGATTGCATCACAATT+TGG 0.287375 4_4:+5709513 Msa0665830:CDS
AATGGTGGAGGTGTCTATTC+TGG 0.290861 4_4:+5705217 Msa0665830:CDS
GTTGTACAGCCGATGAATTC+TGG 0.293954 4_4:-5708479 None:intergenic
GCTGAAGAGATCTCACAATT+TGG 0.296361 4_4:-5704436 None:intergenic
AGCTGGTAAAACTACTTTAA+TGG 0.305956 4_4:+5706936 Msa0665830:CDS
AACACTAGGAATTCAAGTTT+TGG 0.307804 4_4:+5706215 Msa0665830:CDS
AGAGTCCAATCTACCGTCTT+TGG 0.311778 4_4:-5709701 None:intergenic
AGGCTCATCCATGAAAATTA+TGG 0.319454 4_4:-5707424 None:intergenic
CTTCTCACACTTCTTACATT+AGG 0.320704 4_4:+5705675 Msa0665830:CDS
GAAATGTTGCGTGGTATATC+TGG 0.322473 4_4:+5704311 Msa0665830:CDS
GGAAACAACATTGGTCATAT+TGG 0.322767 4_4:+5708197 Msa0665830:CDS
ATACTGCTGTTCTCTTCCTT+GGG 0.322926 4_4:+5708454 Msa0665830:CDS
GGACTCTAGCGAAGTTCTTT+TGG 0.325001 4_4:+5709155 Msa0665830:CDS
TAACAAGAAAGAGCTGTTAA+AGG 0.330990 4_4:+5704962 Msa0665830:CDS
AAGCAACTTATAGAAGAATT+AGG 0.334783 4_4:+5708091 Msa0665830:CDS
CTTCTTGGCCCTCCAAGTTC+CGG 0.338966 4_4:+5703329 Msa0665830:CDS
TGGTGTTCTCACAGCCTTAA+TGG 0.339869 4_4:+5706903 Msa0665830:CDS
GAGATTGATATAACAGATCT+TGG 0.342663 4_4:+5702666 Msa0665830:CDS
TCACAGAAGCACATTGGTAT+TGG 0.344055 4_4:+5706253 Msa0665830:CDS
ACCAGCAAATGCTTTATTCA+TGG 0.345998 4_4:+5704376 Msa0665830:CDS
AGTCAACATGATGTTCATAT+TGG 0.347722 4_4:+5703667 Msa0665830:CDS
ATCAAATCCTATTACGTAAT+AGG 0.348599 4_4:-5705431 None:intergenic
AGCTCCACTGACTCCCATTA+AGG 0.358533 4_4:-5706917 None:intergenic
CCAAGCAGCAACTTCCAAAA+AGG 0.361758 4_4:-5705398 None:intergenic
CGCAATGGTCATTGAAAGTT+CGG 0.366475 4_4:-5705284 None:intergenic
TCCGCACAAGAACTTACTTT+AGG 0.370339 4_4:+5707924 Msa0665830:CDS
CCTCTTCTCTCTCTTTGGCT+AGG 0.372487 4_4:-5706642 None:intergenic
GGATGTATGTGCTGATACTA+TGG 0.373331 4_4:+5704280 Msa0665830:CDS
ATTGAAGCGACATGGTGATT+TGG 0.374997 4_4:-5709247 None:intergenic
TCTGGTGGAGATGGTACTAC+TGG 0.376952 4_4:+5709463 Msa0665830:CDS
CGTAGGATGACACTGCTTCT+TGG 0.378664 4_4:+5703314 Msa0665830:CDS
TCCCTACTTATAACCGTTTG+AGG 0.382563 4_4:+5702610 Msa0665830:CDS
TGATTGTGGCCAACACATTT+GGG 0.384175 4_4:+5705643 Msa0665830:CDS
ATCATTCTGCTCACAATAAC+CGG 0.386543 4_4:-5707052 None:intergenic
CCAGTGTCTTGGACACTATA+CGG 0.387686 4_4:+5709492 Msa0665830:CDS
GTTTGTGCAGTTGTGGTTGT+TGG 0.388720 4_4:+5709624 Msa0665830:CDS
GAAATAATCCAGAAGCCATT+TGG 0.392475 4_4:-5705593 None:intergenic
TGGACTCTATCAGCCAAGTT+TGG 0.397301 4_4:+5709716 Msa0665830:three_prime_UTR
GTCATAGTTTATGCCATGAT+TGG 0.397925 4_4:+5709124 Msa0665830:CDS
CTCTTCTCTCTCTTTGGCTA+GGG 0.399589 4_4:-5706641 None:intergenic
GTTGGTTTGCCTGGTGTGAA+TGG 0.401245 4_4:+5707342 Msa0665830:CDS
AACTTCCAAAGACGGTAGAT+TGG 0.403885 4_4:+5709696 Msa0665830:exon
ACTTCCAACATCCAAGTTGC+TGG 0.404502 4_4:-5707894 None:intergenic
GAAACGTTTGCTCGAATCTC+CGG 0.405322 4_4:+5707033 Msa0665830:CDS
TGGATTTCACCTATGATGTA+TGG 0.406967 4_4:+5706035 Msa0665830:CDS
GGTGTTCTCACAGCCTTAAT+GGG 0.407554 4_4:+5706904 Msa0665830:CDS
TGACTCTTAGATTTGTCAAA+TGG 0.407932 4_4:-5704906 None:intergenic
GATATACAGGCAATGGCAAC+TGG 0.410008 4_4:+5704113 Msa0665830:intron
TTCATGGATGAGCCTACATC+TGG 0.410188 4_4:+5707432 Msa0665830:CDS
ATTACCTGTGCGAATGCATA+AGG 0.410384 4_4:-5708567 None:intergenic
TCTGGGAGAGTGACTTATAA+TGG 0.411926 4_4:+5703598 Msa0665830:CDS
AGTGTGGTCTTTCCGGAACT+TGG 0.414251 4_4:-5703341 None:intergenic
ATAGGGATTGGAGCATTGAT+AGG 0.418944 4_4:+5706276 Msa0665830:CDS
TTCTATAGAGAAAGAGCTGC+TGG 0.420185 4_4:+5708528 Msa0665830:CDS
TCATATCTAACTTCAATTGT+TGG 0.420690 4_4:-5703033 None:intergenic
AGAAGGATCAAGAGCAGTAT+TGG 0.421263 4_4:+5704781 Msa0665830:CDS
AACTATTGCAGTTGAATTAG+TGG 0.421851 4_4:+5707392 Msa0665830:CDS
GAAGGATCAAGAGCAGTATT+GGG 0.423484 4_4:+5704782 Msa0665830:CDS
CCGTTTGAGGAAAGGTTTGT+TGG 0.423645 4_4:+5702623 Msa0665830:CDS
TACCATGTTGGGAGGAAAAT+CGG 0.425744 4_4:+5704867 Msa0665830:CDS
ACGCGGTAATTCAACTTCTT+GGG 0.426367 4_4:-5706497 None:intergenic
TTTGTGCAGTTGTGGTTGTT+GGG 0.431314 4_4:+5709625 Msa0665830:CDS
TTCATGGATGAAATATCTAC+TGG 0.433790 4_4:+5704392 Msa0665830:CDS
TTCATGAAGACATCAACATC+TGG 0.434130 4_4:-5703995 None:intergenic
TTCGACAGATGATTCCTGTC+TGG 0.434742 4_4:+5709445 Msa0665830:intron
TCCATGAATAAAGCATTTGC+TGG 0.435257 4_4:-5704377 None:intergenic
AATGGCAACTGGAGGCCAAC+AGG 0.435462 4_4:+5704124 Msa0665830:CDS
CCAACAAACCTTTCCTCAAA+CGG 0.435794 4_4:-5702623 None:intergenic
GTATGGACAAAATGCTATAA+TGG 0.439160 4_4:+5706052 Msa0665830:CDS
GCTTCGAATATGTCAATACT+TGG 0.439363 4_4:-5707543 None:intergenic
GGTATGAAGCATGACTTCAT+AGG 0.440156 4_4:+5709600 Msa0665830:CDS
AATTGTTATGCAGCAAGTTC+AGG 0.440629 4_4:+5706597 Msa0665830:intron
AGTTAGCCTCTTGCGTTGTT+CGG 0.441081 4_4:-5707373 None:intergenic
AGAAACAGAAACTGTTAGAT+AGG 0.442699 4_4:+5702697 Msa0665830:CDS
TATGATTATGTTTAATGGAA+TGG 0.443113 4_4:+5705261 Msa0665830:CDS
ACTGGGCCTGTCCAGTGTCT+TGG 0.444264 4_4:+5709481 Msa0665830:CDS
TTCTAATTGGCAGGAAATGA+AGG 0.444324 4_4:+5706819 Msa0665830:intron
TTCCTCAAACGGTTATAAGT+AGG 0.445280 4_4:-5702612 None:intergenic
ATGAATTCCTTGGAGATAGT+TGG 0.446688 4_4:+5706078 Msa0665830:CDS
TTGATTAATGTTGCTGAAGA+GGG 0.446947 4_4:+5702720 Msa0665830:CDS
CATTGGTATTGGATAGGGAT+TGG 0.447361 4_4:+5706264 Msa0665830:CDS
TTCGTCCAAGCTGCATCATA+TGG 0.448766 4_4:+5709100 Msa0665830:CDS
CATGAAAATTATGGATGGAT+TGG 0.448912 4_4:-5707415 None:intergenic
TCGAACCGAGGGCATTAAAC+AGG 0.450752 4_4:-5708428 None:intergenic
CAAGGTGTCGGATCACGTTA+TGG 0.450941 4_4:+5703733 Msa0665830:CDS
TGTTACTGTCTATGAGTCAT+TGG 0.452446 4_4:+5707089 Msa0665830:CDS
TACAGCCATCATACCATAGA+AGG 0.453791 4_4:-5709215 None:intergenic
GCTATAGAATGCGGTTCAAA+AGG 0.454048 4_4:-5706675 None:intergenic
AGAATATTGTTCCAAACATC+AGG 0.455884 4_4:-5708270 None:intergenic
ATGAGAAGTTCTTCTACTAC+AGG 0.458702 4_4:+5702492 Msa0665830:CDS
CTACCGTCTTTGGAAGTTGA+AGG 0.459862 4_4:-5709691 None:intergenic
CATTTCAATCATACCATGTT+GGG 0.460284 4_4:+5704856 Msa0665830:CDS
ATCTGTTATATCAATCTCAT+TGG 0.460720 4_4:-5702661 None:intergenic
GTAACTGAGTTCAACAAAGT+TGG 0.461084 4_4:-5703102 None:intergenic
GTCAGTGGTGCATTTAGGCC+TGG 0.465084 4_4:+5706883 Msa0665830:CDS
CCAACCAAAGAGTTTCTCAA+TGG 0.466340 4_4:-5707324 None:intergenic
GCTAGAAAACTAAGTTCCCT+TGG 0.467624 4_4:+5709824 Msa0665830:three_prime_UTR
GTAACAGTTACAAACCTGTA+TGG 0.470750 4_4:-5704819 None:intergenic
TCTGTTGTTTAGAGCATTGG+AGG 0.472013 4_4:+5707843 Msa0665830:intron
GTTCTTTACCTCGTAACATC+AGG 0.474346 4_4:-5705454 None:intergenic
GATGTTTGGAACAATATTCT+GGG 0.475693 4_4:+5708273 Msa0665830:CDS
CTCACACTTCTTACATTAGG+TGG 0.476820 4_4:+5705678 Msa0665830:CDS
TGAGCTGTCTAGAAGAGAAA+AGG 0.478413 4_4:+5703952 Msa0665830:CDS
AGTTCAGGAGGATCTTATAA+TGG 0.478848 4_4:+5706612 Msa0665830:CDS
TCAGCTGCACCTTTCCTCTC+AGG 0.479298 4_4:-5704626 None:intergenic
GCTATTACTGATAAACCAAA+TGG 0.479826 4_4:+5705578 Msa0665830:CDS
CCATTGAGAAACTCTTTGGT+TGG 0.480266 4_4:+5707324 Msa0665830:CDS
CTTCACCTTCTATGGTATGA+TGG 0.480887 4_4:+5709210 Msa0665830:CDS
CTATGAGTCATTGGTCTACT+CGG 0.481106 4_4:+5707098 Msa0665830:CDS
GGAACAATATTCTGGGACCT+TGG 0.482766 4_4:+5708280 Msa0665830:CDS
AAAATGGAAAGAAGTGAAGA+TGG 0.483456 4_4:-5709749 None:intergenic
GAAGGTTCAAGGGGTAATAG+AGG 0.484401 4_4:+5706837 Msa0665830:CDS
AGAAATATATGTTGGACCAC+TGG 0.484634 4_4:+5707691 Msa0665830:CDS
TCAGAAGACAGCACAACAAA+TGG 0.484753 4_4:+5706469 Msa0665830:CDS
TGGAGATATAACCAAAATCA+TGG 0.485125 4_4:+5709533 Msa0665830:CDS
AAGACATCAACATCTGGGTC+TGG 0.485299 4_4:-5703989 None:intergenic
CGCGATTCCTTGAATGGTGG+AGG 0.485931 4_4:+5705205 Msa0665830:CDS
GTGGTCTTTCCGGAACTTGG+AGG 0.486086 4_4:-5703338 None:intergenic
ACTATCCTTAAAGATGTAAG+TGG 0.487406 4_4:+5703278 Msa0665830:CDS
TCCTCAAACGGTTATAAGTA+GGG 0.488325 4_4:-5702611 None:intergenic
GACATTATTCTTATATCTGA+TGG 0.488390 4_4:+5704536 Msa0665830:CDS
ATTGTGTCCTCCAGGTATCT+GGG 0.488853 4_4:+5703581 Msa0665830:intron
TCTACTACAGGTTGGAGAAA+CGG 0.491531 4_4:+5702504 Msa0665830:CDS
TCCATAAGCAAGCCAAGCAT+TGG 0.491584 4_4:-5708177 None:intergenic
TTACATCTTCAAGATATGTC+AGG 0.491740 4_4:+5705031 Msa0665830:CDS
ATAGACACCTCCACCATTCA+AGG 0.493961 4_4:-5705212 None:intergenic
CAGTTGCTACACTTTCCTGT+TGG 0.494237 4_4:-5704139 None:intergenic
CTTGCAGGTAACTTCAAAGA+AGG 0.494941 4_4:+5704764 Msa0665830:intron
TCACTTACTATTTCCTTCCA+AGG 0.498008 4_4:-5708297 None:intergenic
TCGAAAAGTTCATAAGTCTC+AGG 0.500326 4_4:-5704512 None:intergenic
TCTTCATTTATTGTTGCTTG+TGG 0.502052 4_4:-5706445 None:intergenic
ACTCTATCAGCCAAGTTTGG+TGG 0.502201 4_4:+5709719 Msa0665830:three_prime_UTR
TTAATGGGAGTCAGTGGAGC+TGG 0.504309 4_4:+5706919 Msa0665830:CDS
AAGCACATTGGTATTGGATA+GGG 0.507109 4_4:+5706259 Msa0665830:CDS
CAATATTCTGGGACCTTGGA+AGG 0.507958 4_4:+5708284 Msa0665830:CDS
CATAGGAGTTTGTGCAGTTG+TGG 0.508154 4_4:+5709617 Msa0665830:CDS
AGTCATTGGTCTACTCGGCT+TGG 0.508375 4_4:+5707103 Msa0665830:CDS
AGATCATTTGAACCAGGAGC+AGG 0.509530 4_4:-5708118 None:intergenic
ATGCACCGCGATTCCTTGAA+TGG 0.509937 4_4:+5705199 Msa0665830:CDS
GTTGATTAATGTTGCTGAAG+AGG 0.510170 4_4:+5702719 Msa0665830:CDS
TGGCAGGAAATGAAGGTTCA+AGG 0.513165 4_4:+5706826 Msa0665830:intron
CTTCTCCTCCGCGTTTCATG+AGG 0.514054 4_4:-5707670 None:intergenic
GAAATATATGTTGGACCACT+GGG 0.515303 4_4:+5707692 Msa0665830:CDS
AGCAACTGATTATGTACTAA+AGG 0.517484 4_4:+5704154 Msa0665830:CDS
CCTGCCTCCCACAAAAGCTT+CGG 0.519720 4_4:-5703073 None:intergenic
GAATTAGGCAAACCTGCTCC+TGG 0.521206 4_4:+5708106 Msa0665830:CDS
GGATGAAATATCTACTGGCT+TGG 0.521956 4_4:+5704397 Msa0665830:CDS
CTGTTGTTTAGAGCATTGGA+GGG 0.522622 4_4:+5707844 Msa0665830:intron
GTGGTTGTTGGGACTGCAGT+GGG 0.524971 4_4:+5709636 Msa0665830:CDS
ACTTATAACCGTTTGAGGAA+AGG 0.525289 4_4:+5702615 Msa0665830:CDS
GAAGCACATTGGTATTGGAT+AGG 0.525857 4_4:+5706258 Msa0665830:CDS
TCTCTTTGCTTGTAGAAACT+AGG 0.526376 4_4:-5705313 None:intergenic
GACTTATAATGGACATGGAA+TGG 0.526925 4_4:+5703609 Msa0665830:CDS
AACGAAGTTACTCACGATCA+AGG 0.527333 4_4:-5706344 None:intergenic
TCTCACAATTTGGAAAGTTG+TGG 0.527580 4_4:-5704426 None:intergenic
GAAGTTGAATTACCGCGTAT+AGG 0.527910 4_4:+5706502 Msa0665830:CDS
AGGGTGTCAGTGGTGCATTT+AGG 0.530385 4_4:+5706878 Msa0665830:CDS
GTATTTGAATCAACGTCTGC+TGG 0.531531 4_4:-5707135 None:intergenic
GAATATGTTCTCGAGGTCCT+TGG 0.532367 4_4:-5704571 None:intergenic
CAAGACCTGTTTAATGCCCT+CGG 0.532881 4_4:+5708423 Msa0665830:CDS
AAACCGGTGGTTATATTGAC+GGG 0.533091 4_4:+5706977 Msa0665830:CDS
ATGGCTATAATCCAGCAACT+TGG 0.534112 4_4:+5707883 Msa0665830:CDS
CGTTGATTCAAATACCAGAA+AGG 0.534157 4_4:+5707143 Msa0665830:CDS
GGGATCAAGCTTTCCTGACA+AGG 0.534354 4_4:-5703372 None:intergenic
AGACAGTAACATGAGGAGAA+TGG 0.535914 4_4:-5707077 None:intergenic
GGGGTTAGTAAAATCAAAGA+TGG 0.536326 4_4:+5707864 Msa0665830:CDS
AAAACCGGTGGTTATATTGA+CGG 0.536641 4_4:+5706976 Msa0665830:CDS
CTTGCTTATGGAAACAACAT+TGG 0.537542 4_4:+5708188 Msa0665830:CDS
AGTTCATAAGTCTCAGGTGC+TGG 0.538681 4_4:-5704506 None:intergenic
TTTCGAGCTATTGCAGCACT+TGG 0.540052 4_4:+5705612 Msa0665830:CDS
TCAGTGGCACTTACAGGTCG+TGG 0.542076 4_4:-5709322 None:intergenic
CCTTGGGGTCCAGAATTCAT+CGG 0.542369 4_4:+5708470 Msa0665830:CDS
TAATCCAGCAACTTGGATGT+TGG 0.542685 4_4:+5707890 Msa0665830:CDS
TGGTCTTTCCGGAACTTGGA+GGG 0.543383 4_4:-5703337 None:intergenic
GACAGATGATTCCTGTCTGG+TGG 0.544883 4_4:+5709448 Msa0665830:intron
GCATTTCAATCATACCATGT+TGG 0.545145 4_4:+5704855 Msa0665830:CDS
ACCTCACAGAAGTGTATGGC+GGG 0.547238 4_4:-5708225 None:intergenic
TGACGAAGTCATGGAACTAG+TGG 0.549495 4_4:+5707293 Msa0665830:CDS
GAAGTTCTTCTACTACAGGT+TGG 0.555140 4_4:+5702496 Msa0665830:CDS
TGATGAAGAAGCTCTTAAAT+GGG 0.558210 4_4:+5702572 Msa0665830:CDS
GCAGCTTGGACGAAAACATA+AGG 0.558350 4_4:-5709091 None:intergenic
ACCACAGGAGAGATGTTGGT+TGG 0.559158 4_4:+5704353 Msa0665830:CDS
AGAATATACAACATCGTCAA+AGG 0.559514 4_4:-5706697 None:intergenic
TACTGCTGTTCTCTTCCTTG+GGG 0.559921 4_4:+5708455 Msa0665830:CDS
TGTGTCAACCGTGTTCCTAA+CGG 0.560994 4_4:-5707490 None:intergenic
GTCAATACTTGGTTGATGAA+TGG 0.561667 4_4:-5707532 None:intergenic
AGCTCAAGGAAAGAATTGAT+AGG 0.562284 4_4:+5702763 Msa0665830:CDS
ATTAAGGCTGTGAGAACACC+AGG 0.563092 4_4:-5706901 None:intergenic
GGCAGGAAATGAAGGTTCAA+GGG 0.563441 4_4:+5706827 Msa0665830:intron
GCTTTCTCAGCAAGGTGCCA+AGG 0.563628 4_4:+5703715 Msa0665830:CDS
CTAGCATCTAATCCAGATGT+AGG 0.563717 4_4:-5707444 None:intergenic
CTGGTGGAGATGGTACTACT+GGG 0.563910 4_4:+5709464 Msa0665830:CDS
TGATTCCTGTCTGGTGGAGA+TGG 0.564319 4_4:+5709454 Msa0665830:CDS
AGTCCACTCAAATCCAATCA+TGG 0.565135 4_4:-5709137 None:intergenic
TTATACCAAATTTGAACCAA+GGG 0.565281 4_4:-5709840 None:intergenic
GATCTTTCAACTGCTACCAC+TGG 0.565678 4_4:-5708501 None:intergenic
CCAAAGAGAGAGAAGAGGAA+TGG 0.567199 4_4:+5706647 Msa0665830:CDS
TGCAAAGGACCCAAATGTGT+TGG 0.568979 4_4:-5705652 None:intergenic
CAAAGAAAGCGAGTTACCAC+AGG 0.569107 4_4:+5704338 Msa0665830:CDS
AACTGTTACTCAATTTGCTG+AGG 0.569169 4_4:+5704833 Msa0665830:CDS
AATGCGAACCGTTAGGAACA+CGG 0.570551 4_4:+5707482 Msa0665830:CDS
TGTTGTTTAGAGCATTGGAG+GGG 0.570840 4_4:+5707845 Msa0665830:intron
CAATTGTAATGCGAACCGTT+AGG 0.571405 4_4:+5707475 Msa0665830:CDS
CCGTATAGTGTCCAAGACAC+TGG 0.571700 4_4:-5709492 None:intergenic
GATGTTCATTGACGAAGTCA+TGG 0.572110 4_4:+5707284 Msa0665830:intron
CTGTGCGAATGCATAAGGTA+AGG 0.573576 4_4:-5708562 None:intergenic
AAGAACTTCTCATACTCATA+CGG 0.573987 4_4:-5702482 None:intergenic
TTTATACCAAATTTGAACCA+AGG 0.575589 4_4:-5709841 None:intergenic
AATGACTGTGAGGGAAACAT+TGG 0.578214 4_4:+5703693 Msa0665830:CDS
TAGTACCATCTCCACCAGAC+AGG 0.580067 4_4:-5709459 None:intergenic
TATTGGAGAAATGACTGTGA+GGG 0.581417 4_4:+5703684 Msa0665830:CDS
AAACATTGGCTTTCTCAGCA+AGG 0.583474 4_4:+5703707 Msa0665830:CDS
ATATTCTGTTGACATGCCAC+AGG 0.585160 4_4:+5706713 Msa0665830:CDS
ATGCCATGATTGGATTTGAG+TGG 0.586359 4_4:+5709134 Msa0665830:CDS
TGACACCATATGATGCAGCT+TGG 0.586978 4_4:-5709105 None:intergenic
CATAACGTGATCCGACACCT+TGG 0.588186 4_4:-5703732 None:intergenic
ATCAAAAGCTGGTGGATTTG+GGG 0.588857 4_4:+5706008 Msa0665830:CDS
AAAAGGTAATAGGAATCTTG+AGG 0.590354 4_4:-5705381 None:intergenic
AGTTACCACAGGAGAGATGT+TGG 0.590496 4_4:+5704349 Msa0665830:CDS
TGTGGTTGTTGGGACTGCAG+TGG 0.591146 4_4:+5709635 Msa0665830:CDS
GGGCATATGCTATACCTACA+TGG 0.593573 4_4:+5705356 Msa0665830:CDS
TTCAATCATACCATGTTGGG+AGG 0.595222 4_4:+5704859 Msa0665830:CDS
GGTATAGCATATGCCCATGA+AGG 0.595726 4_4:-5705349 None:intergenic
TCAGCAAGGTGCCAAGGTGT+CGG 0.600089 4_4:+5703721 Msa0665830:CDS
CATGGTTCCAACTATCTCCA+AGG 0.600968 4_4:-5706085 None:intergenic
ATAATGGTGAATGAATTCCT+TGG 0.602110 4_4:+5706068 Msa0665830:CDS
TCCTAAAGTAAGTTCTTGTG+CGG 0.602375 4_4:-5707925 None:intergenic
GTATGTGCTGATACTATGGT+GGG 0.602843 4_4:+5704284 Msa0665830:CDS
ATACAGAGGATATCAAAAGC+TGG 0.603572 4_4:+5705997 Msa0665830:intron
GCTCCCGTCAATATAACCAC+CGG 0.604161 4_4:-5706980 None:intergenic
CTTACCTTATGCATTCGCAC+AGG 0.605851 4_4:+5708563 Msa0665830:CDS
TCTATAGAGAAAGAGCTGCT+GGG 0.606112 4_4:+5708529 Msa0665830:CDS
CCAAATTCAAGTAAAACACT+AGG 0.607704 4_4:+5706201 Msa0665830:CDS
TCATGAAGACATCAACATCT+GGG 0.607765 4_4:-5703994 None:intergenic
GGAGGAGAAGAAATATATGT+TGG 0.607944 4_4:+5707683 Msa0665830:CDS
TAGTGTCCAAGACACTGGAC+AGG 0.609518 4_4:-5709487 None:intergenic
CAGCCACGATTGAAGCGACA+TGG 0.610232 4_4:-5709255 None:intergenic
TGCATGAATATAGATACAAA+TGG 0.611753 4_4:-5709794 None:intergenic
GATTCTTCACAGAAGCACAT+TGG 0.616003 4_4:+5706247 Msa0665830:CDS
ACAGCCTTAATGGGAGTCAG+TGG 0.617068 4_4:+5706913 Msa0665830:CDS
AAAGCTTGATCCCAATCTCA+AGG 0.619489 4_4:+5703382 Msa0665830:CDS
AAATGAAGATCATTTGAACC+AGG 0.622701 4_4:-5708124 None:intergenic
GGTTTGTTGGCAACATCGCG+TGG 0.623297 4_4:+5702636 Msa0665830:CDS
CCGATGAATTCTGGACCCCA+AGG 0.625829 4_4:-5708470 None:intergenic
TCACCATGTCGCTTCAATCG+TGG 0.627179 4_4:+5709252 Msa0665830:CDS
CACCGCGATTCCTTGAATGG+TGG 0.627920 4_4:+5705202 Msa0665830:CDS
TCATCCATGAAAATTATGGA+TGG 0.628241 4_4:-5707420 None:intergenic
CCTAGCCAAAGAGAGAGAAG+AGG 0.630150 4_4:+5706642 Msa0665830:CDS
TGTATGTGCTGATACTATGG+TGG 0.630319 4_4:+5704283 Msa0665830:CDS
AGAGTGACTTATAATGGACA+TGG 0.632049 4_4:+5703604 Msa0665830:CDS
GTTAGGAACACGGTTGACAC+AGG 0.634502 4_4:+5707492 Msa0665830:CDS
CAGAGGATATCAAAAGCTGG+TGG 0.635488 4_4:+5706000 Msa0665830:intron
TGTTGAGTTGCAGCAATGGA+AGG 0.637750 4_4:+5702429 None:intergenic
AGTCCTTCAACTTCCAAAGA+CGG 0.639830 4_4:+5709688 Msa0665830:CDS
CAGTTATTCCTCATGAAACG+CGG 0.639848 4_4:+5707662 Msa0665830:intron
TGTTATGCAGCAAGTTCAGG+AGG 0.641379 4_4:+5706600 Msa0665830:intron
TATCTTGAAGATGTAAACAA+AGG 0.641917 4_4:-5705024 None:intergenic
ATATGAGCACCTAAATGTTG+AGG 0.644365 4_4:+5703050 Msa0665830:CDS
GTGGAATAGTCAAACCTCGT+AGG 0.644426 4_4:+5703297 Msa0665830:CDS
AGGTTGGAGAAACGGTACAA+TGG 0.645231 4_4:+5702512 Msa0665830:CDS
CTCAGTTACTAATACAGTCG+AGG 0.645771 4_4:+5703116 Msa0665830:CDS
GAAACTAGGAAGCTTCGCAA+TGG 0.646486 4_4:-5705299 None:intergenic
AATTCAAGAATATGTTCTCG+AGG 0.648022 4_4:-5704578 None:intergenic
TTCAAATGTCCTGAGAGGAA+AGG 0.648456 4_4:+5704617 Msa0665830:CDS
TTTCAACCGAACAACGCAAG+AGG 0.648569 4_4:+5707367 Msa0665830:CDS
TTGGTTTCAAATGTCCTGAG+AGG 0.650207 4_4:+5704612 Msa0665830:CDS
AGGAGGATCTTATAATGGTG+CGG 0.653807 4_4:+5706617 Msa0665830:CDS
GATTTGATCCTGATGTTACG+AGG 0.655210 4_4:+5705446 Msa0665830:CDS
GTTGAAAGACCATTCACACC+AGG 0.655703 4_4:-5707351 None:intergenic
TTGGAGAAACGGTACAATGG+AGG 0.657490 4_4:+5702515 Msa0665830:CDS
GGAATCTTGAGGATCCATGT+AGG 0.657745 4_4:-5705370 None:intergenic
AAGAAGTGTGAGAAGTGCAA+AGG 0.660322 4_4:-5705667 None:intergenic
AACCTCACAGAAGTGTATGG+CGG 0.661399 4_4:-5708226 None:intergenic
ACTTGGTAGAAACATGATTG+TGG 0.665149 4_4:+5705629 Msa0665830:CDS
CTCCACCATTCAAGGAATCG+CGG 0.665499 4_4:-5705204 None:intergenic
AGCAGTATACATCGAACCGA+GGG 0.670120 4_4:-5708439 None:intergenic
TGACAAGGCCAAAAGAAGTG+TGG 0.670517 4_4:-5703357 None:intergenic
AAATGATTGCGAGTATTGGG+CGG 0.670938 4_4:-5708149 None:intergenic
TCCAACCAACATCTCTCCTG+TGG 0.674628 4_4:-5704354 None:intergenic
GCAGGAAATGAAGGTTCAAG+GGG 0.674874 4_4:+5706828 Msa0665830:intron
AGATGTTGATGTCTTCATGA+AGG 0.679322 4_4:+5703997 Msa0665830:CDS
TCGTCAAAGGCTATAGAATG+CGG 0.680770 4_4:-5706684 None:intergenic
TTCATCGGCTGTACAACCAG+TGG 0.680995 4_4:+5708485 Msa0665830:CDS
ATATATGCAGCAGTTCTCTG+AGG 0.682688 4_4:-5703643 None:intergenic
GACTCATAGACAGTAACATG+AGG 0.689699 4_4:-5707084 None:intergenic
GATGGTGAAATTGTCTACCA+AGG 0.691952 4_4:+5704554 Msa0665830:CDS
TTTCAACATATTATTCACTG+TGG 0.695837 4_4:+5706311 Msa0665830:CDS
ATACAGGCAATGGCAACTGG+AGG 0.699423 4_4:+5704116 Msa0665830:intron
GTGGGGAATGAAATGTTGCG+TGG 0.703604 4_4:+5704302 Msa0665830:CDS
CAGCAGTATACATCGAACCG+AGG 0.707321 4_4:-5708440 None:intergenic
ACCCGCCATACACTTCTGTG+AGG 0.707850 4_4:+5708224 Msa0665830:CDS
ATATTGGAGAAATGACTGTG+AGG 0.712009 4_4:+5703683 Msa0665830:CDS
TTATTCCTCATGAAACGCGG+AGG 0.715991 4_4:+5707665 Msa0665830:CDS
AGAAGCAGTGTCATCCTACG+AGG 0.716684 4_4:-5703311 None:intergenic
CTGAAGCAACGAGATAACTG+CGG 0.721466 4_4:-5704483 None:intergenic
TGACTAGAATGACGACCCAG+TGG 0.725066 4_4:-5707707 None:intergenic
TATGTGCTGATACTATGGTG+GGG 0.728416 4_4:+5704285 Msa0665830:CDS
ATGTTGCGTGGTATATCTGG+AGG 0.748040 4_4:+5704314 Msa0665830:CDS
TCATTGCAATTGTTGCCATG+AGG 0.750927 4_4:-5705156 None:intergenic
AAAGATAGATCACCTATACG+CGG 0.753227 4_4:-5706514 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATCTAATTTAAAAAATAT+AGG - chr4_4:5702840-5702859 None:intergenic 10.0%
!! TAATTAGATAGAAAAAAAAA+AGG - chr4_4:5703784-5703803 None:intergenic 10.0%
!! AATTAATGAAATTAATTCTA+AGG + chr4_4:5704059-5704078 Msa0665830:intron 10.0%
!!! TTTTTAAATGATTTTAGAGT+TGG + chr4_4:5703000-5703019 Msa0665830:intron 15.0%
!!! TTTTAAATGATTTTAGAGTT+GGG + chr4_4:5703001-5703020 Msa0665830:intron 15.0%
!! AGCAAATTTATTTGAAAATA+TGG + chr4_4:5707992-5708011 Msa0665830:intron 15.0%
!! ATTTAAGTACAAATGAAAAA+TGG - chr4_4:5709768-5709787 None:intergenic 15.0%
!!! ATTTTTCATTTGTACTTAAA+TGG + chr4_4:5709767-5709786 Msa0665830:three_prime_UTR 15.0%
!!! TCTCATAACTTTTTTTTCTT+TGG + chr4_4:5703199-5703218 Msa0665830:intron 20.0%
!!! TTAATACATTCTATTGACTT+TGG + chr4_4:5704091-5704110 Msa0665830:intron 20.0%
!!! TTCAAAATTATGTAGCTTTT+GGG + chr4_4:5704254-5704273 Msa0665830:intron 20.0%
!! GTAGTTATGATTATGTTTAA+TGG + chr4_4:5705256-5705275 Msa0665830:CDS 20.0%
!! TATGATTATGTTTAATGGAA+TGG + chr4_4:5705261-5705280 Msa0665830:CDS 20.0%
!! ATAACTATCGTATATATGAT+TGG - chr4_4:5705819-5705838 None:intergenic 20.0%
!! ATCGTACAATTATAATTGAT+TGG + chr4_4:5705864-5705883 Msa0665830:intron 20.0%
!! AATGTTTCTTTCAATTTCAT+TGG + chr4_4:5705961-5705980 Msa0665830:intron 20.0%
!! GAAATTATATTATGATACAG+AGG + chr4_4:5705983-5706002 Msa0665830:intron 20.0%
!!! ACTGTTATTTAAGTTTCTTA+TGG + chr4_4:5706368-5706387 Msa0665830:intron 20.0%
!!! GTTAGTTACAATTTAAGATT+TGG + chr4_4:5706751-5706770 Msa0665830:intron 20.0%
!!! AACAATGTTTCTAGTTAATT+TGG + chr4_4:5706780-5706799 Msa0665830:intron 20.0%
!! ATTTGATTGATTGAGATATT+TGG + chr4_4:5707208-5707227 Msa0665830:intron 20.0%
!!! TAATTGTTTTCTATTGAACT+AGG - chr4_4:5708699-5708718 None:intergenic 20.0%
!! CTTGTAATTTACTAATAAGT+GGG - chr4_4:5708925-5708944 None:intergenic 20.0%
!! ACTTGTAATTTACTAATAAG+TGG - chr4_4:5708926-5708945 None:intergenic 20.0%
!! GTCATTTATTAATATCCATT+AGG - chr4_4:5708973-5708992 None:intergenic 20.0%
!!! GAATTCATAAGAAGTTATTT+TGG + chr4_4:5709579-5709598 Msa0665830:CDS 20.0%
! ATCTGTTATATCAATCTCAT+TGG - chr4_4:5702664-5702683 None:intergenic 25.0%
! TCATATCTAACTTCAATTGT+TGG - chr4_4:5703036-5703055 None:intergenic 25.0%
! AACTTGACCTTATAATCTTA+AGG + chr4_4:5703481-5703500 Msa0665830:intron 25.0%
! ACTTGACCTTATAATCTTAA+GGG + chr4_4:5703482-5703501 Msa0665830:intron 25.0%
! ATTTAAATATTGTACTCGAG+GGG - chr4_4:5703521-5703540 None:intergenic 25.0%
! CATTTAAATATTGTACTCGA+GGG - chr4_4:5703522-5703541 None:intergenic 25.0%
! TCATTTAAATATTGTACTCG+AGG - chr4_4:5703523-5703542 None:intergenic 25.0%
!! AAAAAAAAAAGGCACAAACT+CGG - chr4_4:5703773-5703792 None:intergenic 25.0%
!! TGCATAGATAATGTTCATTT+TGG - chr4_4:5704191-5704210 None:intergenic 25.0%
!! CTTCAAAATTATGTAGCTTT+TGG + chr4_4:5704253-5704272 Msa0665830:intron 25.0%
! CAATATGTTCACATTCTTAA+TGG + chr4_4:5704458-5704477 Msa0665830:CDS 25.0%
! GACATTATTCTTATATCTGA+TGG + chr4_4:5704536-5704555 Msa0665830:CDS 25.0%
!!! CTTGAATTTTTTGAATCTGT+TGG + chr4_4:5704593-5704612 Msa0665830:CDS 25.0%
!!! AGTCCATTATTTCAAGTTTT+TGG + chr4_4:5704684-5704703 Msa0665830:intron 25.0%
! TCACCAAAAACTTGAAATAA+TGG - chr4_4:5704690-5704709 None:intergenic 25.0%
!!! TTATTTCAAGTTTTTGGTGA+AGG + chr4_4:5704690-5704709 Msa0665830:intron 25.0%
! GCATTAACAACTAAAAAGTA+TGG + chr4_4:5704936-5704955 Msa0665830:CDS 25.0%
! TATCTTGAAGATGTAAACAA+AGG - chr4_4:5705027-5705046 None:intergenic 25.0%
! ATCAAATCCTATTACGTAAT+AGG - chr4_4:5705434-5705453 None:intergenic 25.0%
!!! TTTTCTTGTAGTGTTACTTA+TGG + chr4_4:5705510-5705529 Msa0665830:intron 25.0%
!! AAATCCATTTTATCATACAG+TGG + chr4_4:5705927-5705946 Msa0665830:intron 25.0%
! CACAAGTTTAAGAAATTACA+TGG - chr4_4:5706106-5706125 None:intergenic 25.0%
! TTTCAACATATTATTCACTG+TGG + chr4_4:5706311-5706330 Msa0665830:CDS 25.0%
! TTAACTCTTGAGATTCTAAT+TGG + chr4_4:5706806-5706825 Msa0665830:intron 25.0%
!! GATAGATTAGTACTTTTGAA+GGG + chr4_4:5706859-5706878 Msa0665830:CDS 25.0%
!!! AACTACTTTAATGGATGTTT+TGG + chr4_4:5706945-5706964 Msa0665830:CDS 25.0%
!! ATACTGTTTGTTCATACTTT+TGG + chr4_4:5707243-5707262 Msa0665830:intron 25.0%
!! ATACTTTTGGATCTGATAAA+TGG + chr4_4:5707256-5707275 Msa0665830:intron 25.0%
!! TCAATTGATCAAGTATTTTG+AGG + chr4_4:5707727-5707746 Msa0665830:CDS 25.0%
!! TTTTCCAATATGATCATTGT+TGG - chr4_4:5708035-5708054 None:intergenic 25.0%
! AACAATAGTTTATAACAGTG+AGG - chr4_4:5708061-5708080 None:intergenic 25.0%
! ACTGTTATAAACTATTGTTC+AGG + chr4_4:5708062-5708081 Msa0665830:intron 25.0%
! AAGCAACTTATAGAAGAATT+AGG + chr4_4:5708091-5708110 Msa0665830:CDS 25.0%
! TAAAAATGATTGCGAGTATT+GGG - chr4_4:5708155-5708174 None:intergenic 25.0%
!! TTTTTCTTCACTGTTTTCAT+AGG + chr4_4:5708247-5708266 Msa0665830:CDS 25.0%
! ATGAGAGATGTAATCTAAAT+AGG + chr4_4:5708636-5708655 Msa0665830:intron 25.0%
! CAACTTGTGTTTAAATACTA+CGG + chr4_4:5708841-5708860 Msa0665830:intron 25.0%
! TTAATATCCATTAGGATTGT+TGG - chr4_4:5708965-5708984 None:intergenic 25.0%
! TGCATGAATATAGATACAAA+TGG - chr4_4:5709797-5709816 None:intergenic 25.0%
! TTATACCAAATTTGAACCAA+GGG - chr4_4:5709843-5709862 None:intergenic 25.0%
! TTTATACCAAATTTGAACCA+AGG - chr4_4:5709844-5709863 None:intergenic 25.0%
AAGAACTTCTCATACTCATA+CGG - chr4_4:5702485-5702504 None:intergenic 30.0%
ATGATGAAGAAGCTCTTAAA+TGG + chr4_4:5702571-5702590 Msa0665830:CDS 30.0%
TGATGAAGAAGCTCTTAAAT+GGG + chr4_4:5702572-5702591 Msa0665830:CDS 30.0%
GAGATTGATATAACAGATCT+TGG + chr4_4:5702666-5702685 Msa0665830:CDS 30.0%
AGAAACAGAAACTGTTAGAT+AGG + chr4_4:5702697-5702716 Msa0665830:CDS 30.0%
TTGATTAATGTTGCTGAAGA+GGG + chr4_4:5702720-5702739 Msa0665830:CDS 30.0%
!! AAGATCGATCAGTTTTTAAG+TGG - chr4_4:5702964-5702983 None:intergenic 30.0%
ACAACTGAGAAAGTAAAATC+TGG - chr4_4:5703151-5703170 None:intergenic 30.0%
! TTTTTCTGCTTGTGAGAATA+TGG - chr4_4:5703250-5703269 None:intergenic 30.0%
ACTATCCTTAAAGATGTAAG+TGG + chr4_4:5703278-5703297 Msa0665830:CDS 30.0%
CTATTCCACTTACATCTTTA+AGG - chr4_4:5703286-5703305 None:intergenic 30.0%
! TTTCTTTTCACCTTGAGATT+GGG - chr4_4:5703395-5703414 None:intergenic 30.0%
! ATTTCTTTTCACCTTGAGAT+TGG - chr4_4:5703396-5703415 None:intergenic 30.0%
CTTTGTCCCTTAAGATTATA+AGG - chr4_4:5703491-5703510 None:intergenic 30.0%
AGTCAACATGATGTTCATAT+TGG + chr4_4:5703667-5703686 Msa0665830:CDS 30.0%
!!! ACGGTTTTTTTCTTTCTATC+GGG - chr4_4:5703849-5703868 None:intergenic 30.0%
!!! CACGGTTTTTTTCTTTCTAT+CGG - chr4_4:5703850-5703869 None:intergenic 30.0%
!! TCTATTGACTTTGGATATAC+AGG + chr4_4:5704100-5704119 Msa0665830:intron 30.0%
AGCAACTGATTATGTACTAA+AGG + chr4_4:5704154-5704173 Msa0665830:CDS 30.0%
ATCTATGCAATATAGTCACA+AGG + chr4_4:5704202-5704221 Msa0665830:intron 30.0%
!!! AATTATGTAGCTTTTGGGAT+TGG + chr4_4:5704259-5704278 Msa0665830:intron 30.0%
TTCATGGATGAAATATCTAC+TGG + chr4_4:5704392-5704411 Msa0665830:CDS 30.0%
AATTCAAGAATATGTTCTCG+AGG - chr4_4:5704581-5704600 None:intergenic 30.0%
CTGCAAGAAGAAATAGATTA+AGG - chr4_4:5704751-5704770 None:intergenic 30.0%
! CTTAATCTATTTCTTCTTGC+AGG + chr4_4:5704749-5704768 Msa0665830:intron 30.0%
CATTTCAATCATACCATGTT+GGG + chr4_4:5704856-5704875 Msa0665830:CDS 30.0%
TGACTCTTAGATTTGTCAAA+TGG - chr4_4:5704909-5704928 None:intergenic 30.0%
!!! TTTTTAGTTGTTAATGCTGC+TGG - chr4_4:5704933-5704952 None:intergenic 30.0%
TAACAAGAAAGAGCTGTTAA+AGG + chr4_4:5704962-5704981 Msa0665830:CDS 30.0%
TTACATCTTCAAGATATGTC+AGG + chr4_4:5705031-5705050 Msa0665830:CDS 30.0%
AAAAGGTAATAGGAATCTTG+AGG - chr4_4:5705384-5705403 None:intergenic 30.0%
! CAAGATTCCTATTACCTTTT+TGG + chr4_4:5705384-5705403 Msa0665830:CDS 30.0%
TTTCTCACCTATTACGTAAT+AGG + chr4_4:5705424-5705443 Msa0665830:CDS 30.0%
!! TGAGGTATTGTTATTTATGC+AGG + chr4_4:5705535-5705554 Msa0665830:intron 30.0%
GCTATTACTGATAAACCAAA+TGG + chr4_4:5705578-5705597 Msa0665830:CDS 30.0%
CTGAAATAAGCTTGTAACTT+CGG - chr4_4:5705735-5705754 None:intergenic 30.0%
AGTTCCACTGTATGATAAAA+TGG - chr4_4:5705934-5705953 None:intergenic 30.0%
GTATGGACAAAATGCTATAA+TGG + chr4_4:5706052-5706071 Msa0665830:CDS 30.0%
ATAATGGTGAATGAATTCCT+TGG + chr4_4:5706068-5706087 Msa0665830:CDS 30.0%
! CCTAGTGTTTTACTTGAATT+TGG - chr4_4:5706204-5706223 None:intergenic 30.0%
CCAAATTCAAGTAAAACACT+AGG + chr4_4:5706201-5706220 Msa0665830:CDS 30.0%
!! AACACTAGGAATTCAAGTTT+TGG + chr4_4:5706215-5706234 Msa0665830:CDS 30.0%
! TCTTCATTTATTGTTGCTTG+TGG - chr4_4:5706448-5706467 None:intergenic 30.0%
! TTATATTGAGTTTTCACGAG+TGG - chr4_4:5706546-5706565 None:intergenic 30.0%
AGAATATACAACATCGTCAA+AGG - chr4_4:5706700-5706719 None:intergenic 30.0%
! CTTTTATAATCACTTACCTG+TGG - chr4_4:5706732-5706751 None:intergenic 30.0%
! GGATAGATTAGTACTTTTGA+AGG + chr4_4:5706858-5706877 Msa0665830:CDS 30.0%
AGCTGGTAAAACTACTTTAA+TGG + chr4_4:5706936-5706955 Msa0665830:CDS 30.0%
!!! CAAACGTTTCTTGCTTTTTA+GGG - chr4_4:5707023-5707042 None:intergenic 30.0%
! GCTTTAAATACTAACCTTTC+TGG - chr4_4:5707160-5707179 None:intergenic 30.0%
TGATTGAGATATTTGGCATT+TGG + chr4_4:5707215-5707234 Msa0665830:intron 30.0%
AACTATTGCAGTTGAATTAG+TGG + chr4_4:5707392-5707411 Msa0665830:CDS 30.0%
CATGAAAATTATGGATGGAT+TGG - chr4_4:5707418-5707437 None:intergenic 30.0%
! CAATCCATCCATAATTTTCA+TGG + chr4_4:5707416-5707435 Msa0665830:CDS 30.0%
TCATCCATGAAAATTATGGA+TGG - chr4_4:5707423-5707442 None:intergenic 30.0%
! TGAGGTAAGAAATGATTTGT+TGG + chr4_4:5707572-5707591 Msa0665830:intron 30.0%
!! TGTTATTTCGAGTCAAAAAG+AGG - chr4_4:5707622-5707641 None:intergenic 30.0%
!!! TTGATCAAGTATTTTGAGGT+TGG + chr4_4:5707731-5707750 Msa0665830:intron 30.0%
TGGATAACTATAATTCCACT+TGG + chr4_4:5707803-5707822 Msa0665830:intron 30.0%
!! TTTTCTGTTGTTTAGAGCAT+TGG + chr4_4:5707840-5707859 Msa0665830:intron 30.0%
ACAAAAATTCTGAGTTGTAC+AGG + chr4_4:5707967-5707986 Msa0665830:CDS 30.0%
AGTACCAACAATGATCATAT+TGG + chr4_4:5708028-5708047 Msa0665830:intron 30.0%
AAATGAAGATCATTTGAACC+AGG - chr4_4:5708127-5708146 None:intergenic 30.0%
CTAAAAATGATTGCGAGTAT+TGG - chr4_4:5708156-5708175 None:intergenic 30.0%
!!! ATCATTTTTAGTCCAATGCT+TGG + chr4_4:5708165-5708184 Msa0665830:CDS 30.0%
AGAATATTGTTCCAAACATC+AGG - chr4_4:5708273-5708292 None:intergenic 30.0%
! TGATGTTTGGAACAATATTC+TGG + chr4_4:5708272-5708291 Msa0665830:CDS 30.0%
! GATGTTTGGAACAATATTCT+GGG + chr4_4:5708273-5708292 Msa0665830:CDS 30.0%
AAAGAGGTTAGAATTCAAGT+TGG - chr4_4:5708380-5708399 None:intergenic 30.0%
GTTCTAATAAGGATCATCAT+AGG - chr4_4:5708670-5708689 None:intergenic 30.0%
CTAGGAATGTTGTTCTAATA+AGG - chr4_4:5708681-5708700 None:intergenic 30.0%
TCAATATATCAACAGCACTA+TGG + chr4_4:5709006-5709025 Msa0665830:intron 30.0%
!!! GCAATTTGGAATCTTTTTTC+AGG + chr4_4:5709289-5709308 Msa0665830:CDS 30.0%
TGGAGATATAACCAAAATCA+TGG + chr4_4:5709533-5709552 Msa0665830:CDS 30.0%
! ATTCTCTGATTCCATGATTT+TGG - chr4_4:5709547-5709566 None:intergenic 30.0%
AAAATGGAAAGAAGTGAAGA+TGG - chr4_4:5709752-5709771 None:intergenic 30.0%
ATGAGAAGTTCTTCTACTAC+AGG + chr4_4:5702492-5702511 Msa0665830:CDS 35.0%
TCCTCAAACGGTTATAAGTA+GGG - chr4_4:5702614-5702633 None:intergenic 35.0%
TTCCTCAAACGGTTATAAGT+AGG - chr4_4:5702615-5702634 None:intergenic 35.0%
ACTTATAACCGTTTGAGGAA+AGG + chr4_4:5702615-5702634 Msa0665830:CDS 35.0%
GTTGATTAATGTTGCTGAAG+AGG + chr4_4:5702719-5702738 Msa0665830:CDS 35.0%
! GAAGTTTTTGTTGAAGCTCA+AGG + chr4_4:5702749-5702768 Msa0665830:CDS 35.0%
AGCTCAAGGAAAGAATTGAT+AGG + chr4_4:5702763-5702782 Msa0665830:CDS 35.0%
ATATGAGCACCTAAATGTTG+AGG + chr4_4:5703050-5703069 Msa0665830:CDS 35.0%
GTAACTGAGTTCAACAAAGT+TGG - chr4_4:5703105-5703124 None:intergenic 35.0%
!! AGAGTGACTTATAATGGACA+TGG + chr4_4:5703604-5703623 Msa0665830:CDS 35.0%
!! GACTTATAATGGACATGGAA+TGG + chr4_4:5703609-5703628 Msa0665830:CDS 35.0%
ATATTGGAGAAATGACTGTG+AGG + chr4_4:5703683-5703702 Msa0665830:CDS 35.0%
TATTGGAGAAATGACTGTGA+GGG + chr4_4:5703684-5703703 Msa0665830:CDS 35.0%
! GTGTCGTTCAAACAAAAACA+CGG - chr4_4:5703868-5703887 None:intergenic 35.0%
TCATGAAGACATCAACATCT+GGG - chr4_4:5703997-5704016 None:intergenic 35.0%
TTCATGAAGACATCAACATC+TGG - chr4_4:5703998-5704017 None:intergenic 35.0%
AGATGTTGATGTCTTCATGA+AGG + chr4_4:5703997-5704016 Msa0665830:CDS 35.0%
! CAAGGTATTTAGAGTCTATC+AGG + chr4_4:5704220-5704239 Msa0665830:intron 35.0%
! ACCAGCAAATGCTTTATTCA+TGG + chr4_4:5704376-5704395 Msa0665830:CDS 35.0%
! TCCATGAATAAAGCATTTGC+TGG - chr4_4:5704380-5704399 None:intergenic 35.0%
TCTCACAATTTGGAAAGTTG+TGG - chr4_4:5704429-5704448 None:intergenic 35.0%
TCGAAAAGTTCATAAGTCTC+AGG - chr4_4:5704515-5704534 None:intergenic 35.0%
TAGACAGAGAAAAACCATAC+AGG + chr4_4:5704805-5704824 Msa0665830:CDS 35.0%
GTAACAGTTACAAACCTGTA+TGG - chr4_4:5704822-5704841 None:intergenic 35.0%
!! AACTGTTACTCAATTTGCTG+AGG + chr4_4:5704833-5704852 Msa0665830:CDS 35.0%
GCATTTCAATCATACCATGT+TGG + chr4_4:5704855-5704874 Msa0665830:CDS 35.0%
GAGGAGAAGCTAAAAAACAT+AGG - chr4_4:5705140-5705159 None:intergenic 35.0%
!!! TGTTTTTTAGCTTCTCCTCA+TGG + chr4_4:5705141-5705160 Msa0665830:intron 35.0%
TCTCTTTGCTTGTAGAAACT+AGG - chr4_4:5705316-5705335 None:intergenic 35.0%
!!! ACCTTCTGTTTTTTCCTTCA+TGG + chr4_4:5705335-5705354 Msa0665830:CDS 35.0%
!!! CCTTCTGTTTTTTCCTTCAT+GGG + chr4_4:5705336-5705355 Msa0665830:CDS 35.0%
GCAACTTCCAAAAAGGTAAT+AGG - chr4_4:5705394-5705413 None:intergenic 35.0%
ATGCTGCAAATAGAAAAGGA+AGG - chr4_4:5705479-5705498 None:intergenic 35.0%
AGACATGCTGCAAATAGAAA+AGG - chr4_4:5705483-5705502 None:intergenic 35.0%
GAAATAATCCAGAAGCCATT+TGG - chr4_4:5705596-5705615 None:intergenic 35.0%
ACTTGGTAGAAACATGATTG+TGG + chr4_4:5705629-5705648 Msa0665830:CDS 35.0%
CTTCTCACACTTCTTACATT+AGG + chr4_4:5705675-5705694 Msa0665830:CDS 35.0%
ATACAGAGGATATCAAAAGC+TGG + chr4_4:5705997-5706016 Msa0665830:intron 35.0%
!! ATATCAAAAGCTGGTGGATT+TGG + chr4_4:5706006-5706025 Msa0665830:CDS 35.0%
!! TATCAAAAGCTGGTGGATTT+GGG + chr4_4:5706007-5706026 Msa0665830:CDS 35.0%
TGGATTTCACCTATGATGTA+TGG + chr4_4:5706035-5706054 Msa0665830:CDS 35.0%
! GCATTTTGTCCATACATCAT+AGG - chr4_4:5706047-5706066 None:intergenic 35.0%
ATGAATTCCTTGGAGATAGT+TGG + chr4_4:5706078-5706097 Msa0665830:CDS 35.0%
TACGTATAGTAGAAACTTGC+AGG + chr4_4:5706141-5706160 Msa0665830:intron 35.0%
AATCGAAAAGCGAATGAGTT+AGG - chr4_4:5706167-5706186 None:intergenic 35.0%
! AAGCACATTGGTATTGGATA+GGG + chr4_4:5706259-5706278 Msa0665830:CDS 35.0%
AAAGATAGATCACCTATACG+CGG - chr4_4:5706517-5706536 None:intergenic 35.0%
AATTGTTATGCAGCAAGTTC+AGG + chr4_4:5706597-5706616 Msa0665830:intron 35.0%
AGTTCAGGAGGATCTTATAA+TGG + chr4_4:5706612-5706631 Msa0665830:CDS 35.0%
TTCTAATTGGCAGGAAATGA+AGG + chr4_4:5706819-5706838 Msa0665830:intron 35.0%
!!! ACTTTAATGGATGTTTTGGC+TGG + chr4_4:5706949-5706968 Msa0665830:CDS 35.0%
AAAACCGGTGGTTATATTGA+CGG + chr4_4:5706976-5706995 Msa0665830:CDS 35.0%
!!! GCAAACGTTTCTTGCTTTTT+AGG - chr4_4:5707024-5707043 None:intergenic 35.0%
ATCATTCTGCTCACAATAAC+CGG - chr4_4:5707055-5707074 None:intergenic 35.0%
TGTTACTGTCTATGAGTCAT+TGG + chr4_4:5707089-5707108 Msa0665830:CDS 35.0%
!! CGTTGATTCAAATACCAGAA+AGG + chr4_4:5707143-5707162 Msa0665830:CDS 35.0%
CAATCCATTGAGAAACTCTT+TGG + chr4_4:5707320-5707339 Msa0665830:CDS 35.0%
!! GTCAATACTTGGTTGATGAA+TGG - chr4_4:5707535-5707554 None:intergenic 35.0%
GCTTCGAATATGTCAATACT+TGG - chr4_4:5707546-5707565 None:intergenic 35.0%
! CATATTCGAAGCTTTTGATG+AGG + chr4_4:5707554-5707573 Msa0665830:CDS 35.0%
GGAGGAGAAGAAATATATGT+TGG + chr4_4:5707683-5707702 Msa0665830:CDS 35.0%
AGAAATATATGTTGGACCAC+TGG + chr4_4:5707691-5707710 Msa0665830:CDS 35.0%
GAAATATATGTTGGACCACT+GGG + chr4_4:5707692-5707711 Msa0665830:CDS 35.0%
ATATTAGATGAGCTTCCAAG+TGG - chr4_4:5707821-5707840 None:intergenic 35.0%
! GGGGTTAGTAAAATCAAAGA+TGG + chr4_4:5707864-5707883 Msa0665830:CDS 35.0%
TCCTAAAGTAAGTTCTTGTG+CGG - chr4_4:5707928-5707947 None:intergenic 35.0%
CTTGCTTATGGAAACAACAT+TGG + chr4_4:5708188-5708207 Msa0665830:CDS 35.0%
GGAAACAACATTGGTCATAT+TGG + chr4_4:5708197-5708216 Msa0665830:CDS 35.0%
! AAAAACCTCACAGAAGTGTA+TGG - chr4_4:5708232-5708251 None:intergenic 35.0%
TCACTTACTATTTCCTTCCA+AGG - chr4_4:5708300-5708319 None:intergenic 35.0%
GTCATATCCAACAATCCTAA+TGG + chr4_4:5708955-5708974 Msa0665830:intron 35.0%
GTCATAGTTTATGCCATGAT+TGG + chr4_4:5709124-5709143 Msa0665830:CDS 35.0%
! TTATGCTACTTCACCTTCTA+TGG + chr4_4:5709202-5709221 Msa0665830:CDS 35.0%
! TCAGTGTGTTTAAAGTTCAG+TGG - chr4_4:5709341-5709360 None:intergenic 35.0%
TGGAAAAAATCCACCAAACT+TGG - chr4_4:5709732-5709751 None:intergenic 35.0%
AAGTTCCCTTGGTTCAAATT+TGG + chr4_4:5709835-5709854 Msa0665830:three_prime_UTR 35.0%
GAAGTTCTTCTACTACAGGT+TGG + chr4_4:5702496-5702515 Msa0665830:CDS 40.0%
! TCTACTACAGGTTGGAGAAA+CGG + chr4_4:5702504-5702523 Msa0665830:CDS 40.0%
TCCCTACTTATAACCGTTTG+AGG + chr4_4:5702610-5702629 Msa0665830:CDS 40.0%
CCAACAAACCTTTCCTCAAA+CGG - chr4_4:5702626-5702645 None:intergenic 40.0%
CTGATCGATCTTTCTCTTTG+TGG + chr4_4:5702972-5702991 Msa0665830:intron 40.0%
CTCAGTTACTAATACAGTCG+AGG + chr4_4:5703116-5703135 Msa0665830:CDS 40.0%
! CAAAAGAAGTGTGGTCTTTC+CGG - chr4_4:5703351-5703370 None:intergenic 40.0%
AAAGCTTGATCCCAATCTCA+AGG + chr4_4:5703382-5703401 Msa0665830:CDS 40.0%
TCTGGGAGAGTGACTTATAA+TGG + chr4_4:5703598-5703617 Msa0665830:CDS 40.0%
ATATATGCAGCAGTTCTCTG+AGG - chr4_4:5703646-5703665 None:intergenic 40.0%
AATGACTGTGAGGGAAACAT+TGG + chr4_4:5703693-5703712 Msa0665830:CDS 40.0%
!! AAACATTGGCTTTCTCAGCA+AGG + chr4_4:5703707-5703726 Msa0665830:CDS 40.0%
!! GTGTGGTTTTTCAGAAACGA+GGG - chr4_4:5703808-5703827 None:intergenic 40.0%
TCTGAAAAACCACACGTGTT+CGG + chr4_4:5703813-5703832 Msa0665830:intron 40.0%
TGAGCTGTCTAGAAGAGAAA+AGG + chr4_4:5703952-5703971 Msa0665830:CDS 40.0%
GACTTTGGATATACAGGCAA+TGG + chr4_4:5704106-5704125 Msa0665830:intron 40.0%
! GGATGTATGTGCTGATACTA+TGG + chr4_4:5704280-5704299 Msa0665830:CDS 40.0%
! TGTATGTGCTGATACTATGG+TGG + chr4_4:5704283-5704302 Msa0665830:CDS 40.0%
! GTATGTGCTGATACTATGGT+GGG + chr4_4:5704284-5704303 Msa0665830:CDS 40.0%
! TATGTGCTGATACTATGGTG+GGG + chr4_4:5704285-5704304 Msa0665830:CDS 40.0%
GAAATGTTGCGTGGTATATC+TGG + chr4_4:5704311-5704330 Msa0665830:CDS 40.0%
! GGATGAAATATCTACTGGCT+TGG + chr4_4:5704397-5704416 Msa0665830:CDS 40.0%
GCTGAAGAGATCTCACAATT+TGG - chr4_4:5704439-5704458 None:intergenic 40.0%
GATGGTGAAATTGTCTACCA+AGG + chr4_4:5704554-5704573 Msa0665830:CDS 40.0%
TTGGTTTCAAATGTCCTGAG+AGG + chr4_4:5704612-5704631 Msa0665830:CDS 40.0%
TTCAAATGTCCTGAGAGGAA+AGG + chr4_4:5704617-5704636 Msa0665830:CDS 40.0%
CTTGCAGGTAACTTCAAAGA+AGG + chr4_4:5704764-5704783 Msa0665830:intron 40.0%
AGAAGGATCAAGAGCAGTAT+TGG + chr4_4:5704781-5704800 Msa0665830:CDS 40.0%
GAAGGATCAAGAGCAGTATT+GGG + chr4_4:5704782-5704801 Msa0665830:CDS 40.0%
TTCAATCATACCATGTTGGG+AGG + chr4_4:5704859-5704878 Msa0665830:CDS 40.0%
TACCATGTTGGGAGGAAAAT+CGG + chr4_4:5704867-5704886 Msa0665830:CDS 40.0%
TCATTGCAATTGTTGCCATG+AGG - chr4_4:5705159-5705178 None:intergenic 40.0%
CGCAATGGTCATTGAAAGTT+CGG - chr4_4:5705287-5705306 None:intergenic 40.0%
CCCATGAAGGAAAAAACAGA+AGG - chr4_4:5705339-5705358 None:intergenic 40.0%
!! CTTTTTGGAAGTTGCTGCTT+GGG + chr4_4:5705399-5705418 Msa0665830:CDS 40.0%
GATTTGATCCTGATGTTACG+AGG + chr4_4:5705446-5705465 Msa0665830:CDS 40.0%
GTTCTTTACCTCGTAACATC+AGG - chr4_4:5705457-5705476 None:intergenic 40.0%
!! GTAGTGTTACTTATGGTGTG+AGG + chr4_4:5705517-5705536 Msa0665830:intron 40.0%
CTGATAAACCAAATGGCTTC+TGG + chr4_4:5705585-5705604 Msa0665830:CDS 40.0%
ATGATTGTGGCCAACACATT+TGG + chr4_4:5705642-5705661 Msa0665830:CDS 40.0%
TGATTGTGGCCAACACATTT+GGG + chr4_4:5705643-5705662 Msa0665830:CDS 40.0%
! AAGAAGTGTGAGAAGTGCAA+AGG - chr4_4:5705670-5705689 None:intergenic 40.0%
CTCACACTTCTTACATTAGG+TGG + chr4_4:5705678-5705697 Msa0665830:CDS 40.0%
CGGTTATTTGAACTCACTTC+TGG - chr4_4:5705715-5705734 None:intergenic 40.0%
!! ATCAAAAGCTGGTGGATTTG+GGG + chr4_4:5706008-5706027 Msa0665830:CDS 40.0%
! GATTCTTCACAGAAGCACAT+TGG + chr4_4:5706247-5706266 Msa0665830:CDS 40.0%
! TCACAGAAGCACATTGGTAT+TGG + chr4_4:5706253-5706272 Msa0665830:CDS 40.0%
! GAAGCACATTGGTATTGGAT+AGG + chr4_4:5706258-5706277 Msa0665830:CDS 40.0%
! CATTGGTATTGGATAGGGAT+TGG + chr4_4:5706264-5706283 Msa0665830:CDS 40.0%
!! ATAGGGATTGGAGCATTGAT+AGG + chr4_4:5706276-5706295 Msa0665830:CDS 40.0%
AACGAAGTTACTCACGATCA+AGG - chr4_4:5706347-5706366 None:intergenic 40.0%
TCAGAAGACAGCACAACAAA+TGG + chr4_4:5706469-5706488 Msa0665830:CDS 40.0%
ACGCGGTAATTCAACTTCTT+GGG - chr4_4:5706500-5706519 None:intergenic 40.0%
TACGCGGTAATTCAACTTCT+TGG - chr4_4:5706501-5706520 None:intergenic 40.0%
GAAGTTGAATTACCGCGTAT+AGG + chr4_4:5706502-5706521 Msa0665830:CDS 40.0%
AGGAGGATCTTATAATGGTG+CGG + chr4_4:5706617-5706636 Msa0665830:CDS 40.0%
GCTATAGAATGCGGTTCAAA+AGG - chr4_4:5706678-5706697 None:intergenic 40.0%
TCGTCAAAGGCTATAGAATG+CGG - chr4_4:5706687-5706706 None:intergenic 40.0%
ATATTCTGTTGACATGCCAC+AGG + chr4_4:5706713-5706732 Msa0665830:CDS 40.0%
CTCTTGAGATTCTAATTGGC+AGG + chr4_4:5706810-5706829 Msa0665830:intron 40.0%
!!! GTTTTGGCTGGTAGAAAAAC+CGG + chr4_4:5706961-5706980 Msa0665830:CDS 40.0%
AAACCGGTGGTTATATTGAC+GGG + chr4_4:5706977-5706996 Msa0665830:CDS 40.0%
! GACGGGAGCATAAAAATTTC+TGG + chr4_4:5706994-5707013 Msa0665830:CDS 40.0%
AGACAGTAACATGAGGAGAA+TGG - chr4_4:5707080-5707099 None:intergenic 40.0%
GACTCATAGACAGTAACATG+AGG - chr4_4:5707087-5707106 None:intergenic 40.0%
! CTATGAGTCATTGGTCTACT+CGG + chr4_4:5707098-5707117 Msa0665830:CDS 40.0%
GTATTTGAATCAACGTCTGC+TGG - chr4_4:5707138-5707157 None:intergenic 40.0%
GATGTTCATTGACGAAGTCA+TGG + chr4_4:5707284-5707303 Msa0665830:intron 40.0%
CCAACCAAAGAGTTTCTCAA+TGG - chr4_4:5707327-5707346 None:intergenic 40.0%
CCATTGAGAAACTCTTTGGT+TGG + chr4_4:5707324-5707343 Msa0665830:CDS 40.0%
CTAGCATCTAATCCAGATGT+AGG - chr4_4:5707447-5707466 None:intergenic 40.0%
CAATTGTAATGCGAACCGTT+AGG + chr4_4:5707475-5707494 Msa0665830:CDS 40.0%
CAGTTATTCCTCATGAAACG+CGG + chr4_4:5707662-5707681 Msa0665830:intron 40.0%
!! TCTGTTGTTTAGAGCATTGG+AGG + chr4_4:5707843-5707862 Msa0665830:intron 40.0%
!! CTGTTGTTTAGAGCATTGGA+GGG + chr4_4:5707844-5707863 Msa0665830:intron 40.0%
!! TGTTGTTTAGAGCATTGGAG+GGG + chr4_4:5707845-5707864 Msa0665830:intron 40.0%
ATGGCTATAATCCAGCAACT+TGG + chr4_4:5707883-5707902 Msa0665830:CDS 40.0%
TAATCCAGCAACTTGGATGT+TGG + chr4_4:5707890-5707909 Msa0665830:CDS 40.0%
TCCGCACAAGAACTTACTTT+AGG + chr4_4:5707924-5707943 Msa0665830:CDS 40.0%
!! AAATGATTGCGAGTATTGGG+CGG - chr4_4:5708152-5708171 None:intergenic 40.0%
! GTTTTCATAGGCCTGATGTT+TGG + chr4_4:5708259-5708278 Msa0665830:CDS 40.0%
GAGCTGGAAATCAACAAAAG+AGG - chr4_4:5708396-5708415 None:intergenic 40.0%
TATACTGCTGTTCTCTTCCT+TGG + chr4_4:5708453-5708472 Msa0665830:CDS 40.0%
ATACTGCTGTTCTCTTCCTT+GGG + chr4_4:5708454-5708473 Msa0665830:CDS 40.0%
TTCTATAGAGAAAGAGCTGC+TGG + chr4_4:5708528-5708547 Msa0665830:CDS 40.0%
TCTATAGAGAAAGAGCTGCT+GGG + chr4_4:5708529-5708548 Msa0665830:CDS 40.0%
ATTACCTGTGCGAATGCATA+AGG - chr4_4:5708570-5708589 None:intergenic 40.0%
GAACGCACAAGATTTGATCA+CGG + chr4_4:5708736-5708755 Msa0665830:intron 40.0%
CAAGATTTGATCACGGAGTT+CGG + chr4_4:5708743-5708762 Msa0665830:intron 40.0%
GAAAATCATTGCAGCCACAT+TGG - chr4_4:5708793-5708812 None:intergenic 40.0%
AACTCACTTTCTCTTGTCAC+AGG + chr4_4:5709054-5709073 Msa0665830:intron 40.0%
ATGCCATGATTGGATTTGAG+TGG + chr4_4:5709134-5709153 Msa0665830:CDS 40.0%
AGTCCACTCAAATCCAATCA+TGG - chr4_4:5709140-5709159 None:intergenic 40.0%
CTTCACCTTCTATGGTATGA+TGG + chr4_4:5709210-5709229 Msa0665830:CDS 40.0%
TACAGCCATCATACCATAGA+AGG - chr4_4:5709218-5709237 None:intergenic 40.0%
ATTGAAGCGACATGGTGATT+TGG - chr4_4:5709250-5709269 None:intergenic 40.0%
! CTGCTGCATTTTACGCAATT+TGG + chr4_4:5709275-5709294 Msa0665830:CDS 40.0%
TAAAGTTCAGTGGCACTTAC+AGG - chr4_4:5709331-5709350 None:intergenic 40.0%
GGACTGATTGCATCACAATT+TGG + chr4_4:5709513-5709532 Msa0665830:CDS 40.0%
GGTATGAAGCATGACTTCAT+AGG + chr4_4:5709600-5709619 Msa0665830:CDS 40.0%
TTTGTGCAGTTGTGGTTGTT+GGG + chr4_4:5709625-5709644 Msa0665830:CDS 40.0%
AGTCCTTCAACTTCCAAAGA+CGG + chr4_4:5709688-5709707 Msa0665830:CDS 40.0%
AACTTCCAAAGACGGTAGAT+TGG + chr4_4:5709696-5709715 Msa0665830:exon 40.0%
GCTAGAAAACTAAGTTCCCT+TGG + chr4_4:5709824-5709843 Msa0665830:three_prime_UTR 40.0%
AGGTTGGAGAAACGGTACAA+TGG + chr4_4:5702512-5702531 Msa0665830:CDS 45.0%
TTGGAGAAACGGTACAATGG+AGG + chr4_4:5702515-5702534 Msa0665830:CDS 45.0%
! AGGCTTTTGCAAAGTCTTCG+CGG + chr4_4:5702535-5702554 Msa0665830:CDS 45.0%
CCGTTTGAGGAAAGGTTTGT+TGG + chr4_4:5702623-5702642 Msa0665830:CDS 45.0%
AAGCTTCGGCCTCAACATTT+AGG - chr4_4:5703062-5703081 None:intergenic 45.0%
GTGGAATAGTCAAACCTCGT+AGG + chr4_4:5703297-5703316 Msa0665830:CDS 45.0%
! CGGAAAGACCACACTTCTTT+TGG + chr4_4:5703349-5703368 Msa0665830:CDS 45.0%
TGACAAGGCCAAAAGAAGTG+TGG - chr4_4:5703360-5703379 None:intergenic 45.0%
!!! ACACTTCTTTTGGCCTTGTC+AGG + chr4_4:5703359-5703378 Msa0665830:CDS 45.0%
GTTCTCTTTCGCTGTTCAAG+AGG + chr4_4:5703440-5703459 Msa0665830:intron 45.0%
ATTGTGTCCTCCAGGTATCT+GGG + chr4_4:5703581-5703600 Msa0665830:intron 45.0%
!! CGTGTGGTTTTTCAGAAACG+AGG - chr4_4:5703809-5703828 None:intergenic 45.0%
AGTATACTTCCGAACACGTG+TGG - chr4_4:5703825-5703844 None:intergenic 45.0%
CAGCTCAGCTAACAAGTCTA+TGG - chr4_4:5703939-5703958 None:intergenic 45.0%
AAGACATCAACATCTGGGTC+TGG - chr4_4:5703992-5704011 None:intergenic 45.0%
GATATACAGGCAATGGCAAC+TGG + chr4_4:5704113-5704132 Msa0665830:intron 45.0%
CAGTTGCTACACTTTCCTGT+TGG - chr4_4:5704142-5704161 None:intergenic 45.0%
ATGTTGCGTGGTATATCTGG+AGG + chr4_4:5704314-5704333 Msa0665830:CDS 45.0%
CAAAGAAAGCGAGTTACCAC+AGG + chr4_4:5704338-5704357 Msa0665830:CDS 45.0%
AGTTACCACAGGAGAGATGT+TGG + chr4_4:5704349-5704368 Msa0665830:CDS 45.0%
CTGAAGCAACGAGATAACTG+CGG - chr4_4:5704486-5704505 None:intergenic 45.0%
AGTTCATAAGTCTCAGGTGC+TGG - chr4_4:5704509-5704528 None:intergenic 45.0%
GAATATGTTCTCGAGGTCCT+TGG - chr4_4:5704574-5704593 None:intergenic 45.0%
ATAGACACCTCCACCATTCA+AGG - chr4_4:5705215-5705234 None:intergenic 45.0%
!! AATGGTGGAGGTGTCTATTC+TGG + chr4_4:5705217-5705236 Msa0665830:CDS 45.0%
GAAACTAGGAAGCTTCGCAA+TGG - chr4_4:5705302-5705321 None:intergenic 45.0%
GGTATAGCATATGCCCATGA+AGG - chr4_4:5705352-5705371 None:intergenic 45.0%
GGGCATATGCTATACCTACA+TGG + chr4_4:5705356-5705375 Msa0665830:CDS 45.0%
GGAATCTTGAGGATCCATGT+AGG - chr4_4:5705373-5705392 None:intergenic 45.0%
CCAAGCAGCAACTTCCAAAA+AGG - chr4_4:5705401-5705420 None:intergenic 45.0%
!! CCTTTTTGGAAGTTGCTGCT+TGG + chr4_4:5705398-5705417 Msa0665830:CDS 45.0%
TTTCGAGCTATTGCAGCACT+TGG + chr4_4:5705612-5705631 Msa0665830:CDS 45.0%
TGCAAAGGACCCAAATGTGT+TGG - chr4_4:5705655-5705674 None:intergenic 45.0%
CAGAGGATATCAAAAGCTGG+TGG + chr4_4:5706000-5706019 Msa0665830:intron 45.0%
CATGGTTCCAACTATCTCCA+AGG - chr4_4:5706088-5706107 None:intergenic 45.0%
!!! ATTCAAGTTTTGGAGTCGCG+TGG + chr4_4:5706225-5706244 Msa0665830:CDS 45.0%
TGTTATGCAGCAAGTTCAGG+AGG + chr4_4:5706600-5706619 Msa0665830:intron 45.0%
CTCTTCTCTCTCTTTGGCTA+GGG - chr4_4:5706644-5706663 None:intergenic 45.0%
CCATTCCTCTTCTCTCTCTT+TGG - chr4_4:5706650-5706669 None:intergenic 45.0%
CCAAAGAGAGAGAAGAGGAA+TGG + chr4_4:5706647-5706666 Msa0665830:CDS 45.0%
TGGCAGGAAATGAAGGTTCA+AGG + chr4_4:5706826-5706845 Msa0665830:intron 45.0%
GGCAGGAAATGAAGGTTCAA+GGG + chr4_4:5706827-5706846 Msa0665830:intron 45.0%
GCAGGAAATGAAGGTTCAAG+GGG + chr4_4:5706828-5706847 Msa0665830:intron 45.0%
GAAGGTTCAAGGGGTAATAG+AGG + chr4_4:5706837-5706856 Msa0665830:CDS 45.0%
!!! GTACTTTTGAAGGGTGTCAG+TGG + chr4_4:5706868-5706887 Msa0665830:CDS 45.0%
ATTAAGGCTGTGAGAACACC+AGG - chr4_4:5706904-5706923 None:intergenic 45.0%
TGGTGTTCTCACAGCCTTAA+TGG + chr4_4:5706903-5706922 Msa0665830:CDS 45.0%
GGTGTTCTCACAGCCTTAAT+GGG + chr4_4:5706904-5706923 Msa0665830:CDS 45.0%
GAAACGTTTGCTCGAATCTC+CGG + chr4_4:5707033-5707052 Msa0665830:CDS 45.0%
TGACGAAGTCATGGAACTAG+TGG + chr4_4:5707293-5707312 Msa0665830:CDS 45.0%
!! AACTCTTTGGTTGGTTTGCC+TGG + chr4_4:5707333-5707352 Msa0665830:CDS 45.0%
GTTGAAAGACCATTCACACC+AGG - chr4_4:5707354-5707373 None:intergenic 45.0%
TTTCAACCGAACAACGCAAG+AGG + chr4_4:5707367-5707386 Msa0665830:CDS 45.0%
! AGTTAGCCTCTTGCGTTGTT+CGG - chr4_4:5707376-5707395 None:intergenic 45.0%
AATGCGAACCGTTAGGAACA+CGG + chr4_4:5707482-5707501 Msa0665830:CDS 45.0%
TGTGTCAACCGTGTTCCTAA+CGG - chr4_4:5707493-5707512 None:intergenic 45.0%
CGCGTTTCATGAGGAATAAC+TGG - chr4_4:5707664-5707683 None:intergenic 45.0%
TTATTCCTCATGAAACGCGG+AGG + chr4_4:5707665-5707684 Msa0665830:CDS 45.0%
ACTTCCAACATCCAAGTTGC+TGG - chr4_4:5707897-5707916 None:intergenic 45.0%
AGATCATTTGAACCAGGAGC+AGG - chr4_4:5708121-5708140 None:intergenic 45.0%
!! TCCAATGCTTGGCTTGCTTA+TGG + chr4_4:5708176-5708195 Msa0665830:CDS 45.0%
TCCATAAGCAAGCCAAGCAT+TGG - chr4_4:5708180-5708199 None:intergenic 45.0%
! AACCTCACAGAAGTGTATGG+CGG - chr4_4:5708229-5708248 None:intergenic 45.0%
!! GGAACAATATTCTGGGACCT+TGG + chr4_4:5708280-5708299 Msa0665830:CDS 45.0%
!! CAATATTCTGGGACCTTGGA+AGG + chr4_4:5708284-5708303 Msa0665830:CDS 45.0%
! CAGGTCTTGTCTATTTGAGC+TGG - chr4_4:5708412-5708431 None:intergenic 45.0%
CAAGACCTGTTTAATGCCCT+CGG + chr4_4:5708423-5708442 Msa0665830:CDS 45.0%
AGCAGTATACATCGAACCGA+GGG - chr4_4:5708442-5708461 None:intergenic 45.0%
TACTGCTGTTCTCTTCCTTG+GGG + chr4_4:5708455-5708474 Msa0665830:CDS 45.0%
GTTGTACAGCCGATGAATTC+TGG - chr4_4:5708482-5708501 None:intergenic 45.0%
GATCTTTCAACTGCTACCAC+TGG - chr4_4:5708504-5708523 None:intergenic 45.0%
CTGTGCGAATGCATAAGGTA+AGG - chr4_4:5708565-5708584 None:intergenic 45.0%
CTTACCTTATGCATTCGCAC+AGG + chr4_4:5708563-5708582 Msa0665830:CDS 45.0%
GCAGCTTGGACGAAAACATA+AGG - chr4_4:5709094-5709113 None:intergenic 45.0%
TTCGTCCAAGCTGCATCATA+TGG + chr4_4:5709100-5709119 Msa0665830:CDS 45.0%
TGACACCATATGATGCAGCT+TGG - chr4_4:5709108-5709127 None:intergenic 45.0%
! GGACTCTAGCGAAGTTCTTT+TGG + chr4_4:5709155-5709174 Msa0665830:CDS 45.0%
TTCGACAGATGATTCCTGTC+TGG + chr4_4:5709445-5709464 Msa0665830:intron 45.0%
CCAGTGTCTTGGACACTATA+CGG + chr4_4:5709492-5709511 Msa0665830:CDS 45.0%
CATAGGAGTTTGTGCAGTTG+TGG + chr4_4:5709617-5709636 Msa0665830:CDS 45.0%
GTTTGTGCAGTTGTGGTTGT+TGG + chr4_4:5709624-5709643 Msa0665830:CDS 45.0%
! CTACCGTCTTTGGAAGTTGA+AGG - chr4_4:5709694-5709713 None:intergenic 45.0%
AGAGTCCAATCTACCGTCTT+TGG - chr4_4:5709704-5709723 None:intergenic 45.0%
TGGACTCTATCAGCCAAGTT+TGG + chr4_4:5709716-5709735 Msa0665830:three_prime_UTR 45.0%
ACTCTATCAGCCAAGTTTGG+TGG + chr4_4:5709719-5709738 Msa0665830:three_prime_UTR 45.0%
!! AAAAAATAAATAAATTAAAG+TGG + chr4_4:5707783-5707802 Msa0665830:intron 5.0%
! TGTTGAGGCCGAAGCTTTTG+TGG + chr4_4:5703065-5703084 Msa0665830:CDS 50.0%
! GTTGAGGCCGAAGCTTTTGT+GGG + chr4_4:5703066-5703085 Msa0665830:CDS 50.0%
AGAAGCAGTGTCATCCTACG+AGG - chr4_4:5703314-5703333 None:intergenic 50.0%
CGTAGGATGACACTGCTTCT+TGG + chr4_4:5703314-5703333 Msa0665830:CDS 50.0%
TGGTCTTTCCGGAACTTGGA+GGG - chr4_4:5703340-5703359 None:intergenic 50.0%
AGTGTGGTCTTTCCGGAACT+TGG - chr4_4:5703344-5703363 None:intergenic 50.0%
GGGATCAAGCTTTCCTGACA+AGG - chr4_4:5703375-5703394 None:intergenic 50.0%
TCGATGTCATTGTGTCCTCC+AGG + chr4_4:5703573-5703592 Msa0665830:intron 50.0%
CATTGTGTCCTCCAGGTATC+TGG + chr4_4:5703580-5703599 Msa0665830:intron 50.0%
AAGTCACTCTCCCAGATACC+TGG - chr4_4:5703594-5703613 None:intergenic 50.0%
CATAACGTGATCCGACACCT+TGG - chr4_4:5703735-5703754 None:intergenic 50.0%
!! CAAGGTGTCGGATCACGTTA+TGG + chr4_4:5703733-5703752 Msa0665830:CDS 50.0%
ATACAGGCAATGGCAACTGG+AGG + chr4_4:5704116-5704135 Msa0665830:intron 50.0%
GTGGGGAATGAAATGTTGCG+TGG + chr4_4:5704302-5704321 Msa0665830:CDS 50.0%
ACCACAGGAGAGATGTTGGT+TGG + chr4_4:5704353-5704372 Msa0665830:CDS 50.0%
TCCAACCAACATCTCTCCTG+TGG - chr4_4:5704357-5704376 None:intergenic 50.0%
! CTCCGATTTTCCTCCCAACA+TGG - chr4_4:5704872-5704891 None:intergenic 50.0%
ATGCACCGCGATTCCTTGAA+TGG + chr4_4:5705199-5705218 Msa0665830:CDS 50.0%
CTCCACCATTCAAGGAATCG+CGG - chr4_4:5705207-5705226 None:intergenic 50.0%
CCTCTTCTCTCTCTTTGGCT+AGG - chr4_4:5706645-5706664 None:intergenic 50.0%
CCTAGCCAAAGAGAGAGAAG+AGG + chr4_4:5706642-5706661 Msa0665830:CDS 50.0%
! AGGGTGTCAGTGGTGCATTT+AGG + chr4_4:5706878-5706897 Msa0665830:CDS 50.0%
ACAGCCTTAATGGGAGTCAG+TGG + chr4_4:5706913-5706932 Msa0665830:CDS 50.0%
!! AGCTCCACTGACTCCCATTA+AGG - chr4_4:5706920-5706939 None:intergenic 50.0%
TTAATGGGAGTCAGTGGAGC+TGG + chr4_4:5706919-5706938 Msa0665830:CDS 50.0%
TTGGCTGGTAGAAAAACCGG+TGG + chr4_4:5706964-5706983 Msa0665830:CDS 50.0%
GCTCCCGTCAATATAACCAC+CGG - chr4_4:5706983-5707002 None:intergenic 50.0%
! AGTCATTGGTCTACTCGGCT+TGG + chr4_4:5707103-5707122 Msa0665830:CDS 50.0%
!! GTTGGTTTGCCTGGTGTGAA+TGG + chr4_4:5707342-5707361 Msa0665830:CDS 50.0%
GTTAGGAACACGGTTGACAC+AGG + chr4_4:5707492-5707511 Msa0665830:CDS 50.0%
TGACTAGAATGACGACCCAG+TGG - chr4_4:5707710-5707729 None:intergenic 50.0%
GAATTAGGCAAACCTGCTCC+TGG + chr4_4:5708106-5708125 Msa0665830:CDS 50.0%
! ACCTCACAGAAGTGTATGGC+GGG - chr4_4:5708228-5708247 None:intergenic 50.0%
!! TCGAACCGAGGGCATTAAAC+AGG - chr4_4:5708431-5708450 None:intergenic 50.0%
CAGCAGTATACATCGAACCG+AGG - chr4_4:5708443-5708462 None:intergenic 50.0%
CCTTGGGGTCCAGAATTCAT+CGG + chr4_4:5708470-5708489 Msa0665830:CDS 50.0%
! TTCATCGGCTGTACAACCAG+TGG + chr4_4:5708485-5708504 Msa0665830:CDS 50.0%
! CACATTGGAGTCAAAGGCGT+AGG - chr4_4:5708778-5708797 None:intergenic 50.0%
CTACGCCTTTGACTCCAATG+TGG + chr4_4:5708776-5708795 Msa0665830:intron 50.0%
TGCAGCCACATTGGAGTCAA+AGG - chr4_4:5708784-5708803 None:intergenic 50.0%
ATTACCCCTACACCGTACCT+GGG + chr4_4:5708877-5708896 Msa0665830:intron 50.0%
! TCACCATGTCGCTTCAATCG+TGG + chr4_4:5709252-5709271 Msa0665830:CDS 50.0%
GACAGATGATTCCTGTCTGG+TGG + chr4_4:5709448-5709467 Msa0665830:intron 50.0%
TGATTCCTGTCTGGTGGAGA+TGG + chr4_4:5709454-5709473 Msa0665830:CDS 50.0%
TAGTACCATCTCCACCAGAC+AGG - chr4_4:5709462-5709481 None:intergenic 50.0%
TCTGGTGGAGATGGTACTAC+TGG + chr4_4:5709463-5709482 Msa0665830:CDS 50.0%
CTGGTGGAGATGGTACTACT+GGG + chr4_4:5709464-5709483 Msa0665830:CDS 50.0%
TAGTGTCCAAGACACTGGAC+AGG - chr4_4:5709490-5709509 None:intergenic 50.0%
CCGTATAGTGTCCAAGACAC+TGG - chr4_4:5709495-5709514 None:intergenic 50.0%
!! GGTTTGTTGGCAACATCGCG+TGG + chr4_4:5702636-5702655 Msa0665830:CDS 55.0%
CCTGCCTCCCACAAAAGCTT+CGG - chr4_4:5703076-5703095 None:intergenic 55.0%
! CGAAGCTTTTGTGGGAGGCA+GGG + chr4_4:5703074-5703093 Msa0665830:CDS 55.0%
CTTCTTGGCCCTCCAAGTTC+CGG + chr4_4:5703329-5703348 Msa0665830:CDS 55.0%
GTGGTCTTTCCGGAACTTGG+AGG - chr4_4:5703341-5703360 None:intergenic 55.0%
TCACTCTCCCAGATACCTGG+AGG - chr4_4:5703591-5703610 None:intergenic 55.0%
! GCTTTCTCAGCAAGGTGCCA+AGG + chr4_4:5703715-5703734 Msa0665830:CDS 55.0%
! TCAGCAAGGTGCCAAGGTGT+CGG + chr4_4:5703721-5703740 Msa0665830:CDS 55.0%
AATGGCAACTGGAGGCCAAC+AGG + chr4_4:5704124-5704143 Msa0665830:CDS 55.0%
TCAGCTGCACCTTTCCTCTC+AGG - chr4_4:5704629-5704648 None:intergenic 55.0%
CACCGCGATTCCTTGAATGG+TGG + chr4_4:5705202-5705221 Msa0665830:CDS 55.0%
CGCGATTCCTTGAATGGTGG+AGG + chr4_4:5705205-5705224 Msa0665830:CDS 55.0%
!! GCTGGTGGATTTGGGGTTAC+TGG + chr4_4:5706015-5706034 Msa0665830:CDS 55.0%
GTCAGTGGTGCATTTAGGCC+TGG + chr4_4:5706883-5706902 Msa0665830:CDS 55.0%
CTTCTCCTCCGCGTTTCATG+AGG - chr4_4:5707673-5707692 None:intergenic 55.0%
ACCCGCCATACACTTCTGTG+AGG + chr4_4:5708224-5708243 Msa0665830:CDS 55.0%
CCGATGAATTCTGGACCCCA+AGG - chr4_4:5708473-5708492 None:intergenic 55.0%
GATTACCCCTACACCGTACC+TGG + chr4_4:5708876-5708895 Msa0665830:intron 55.0%
TTACCCCTACACCGTACCTG+GGG + chr4_4:5708878-5708897 Msa0665830:intron 55.0%
CAGCCACGATTGAAGCGACA+TGG - chr4_4:5709258-5709277 None:intergenic 55.0%
TCAGTGGCACTTACAGGTCG+TGG - chr4_4:5709325-5709344 None:intergenic 55.0%
TGTGGTTGTTGGGACTGCAG+TGG + chr4_4:5709635-5709654 Msa0665830:CDS 55.0%
GTGGTTGTTGGGACTGCAGT+GGG + chr4_4:5709636-5709655 Msa0665830:CDS 55.0%
! GAGGCCGAAGCTTTTGTGGG+AGG + chr4_4:5703069-5703088 Msa0665830:CDS 60.0%
! CCGAAGCTTTTGTGGGAGGC+AGG + chr4_4:5703073-5703092 Msa0665830:CDS 60.0%
TACCCCTACACCGTACCTGG+GGG + chr4_4:5708879-5708898 Msa0665830:intron 60.0%
ACACCCCCAGGTACGGTGTA+GGG - chr4_4:5708885-5708904 None:intergenic 60.0%
ACTGGGCCTGTCCAGTGTCT+TGG + chr4_4:5709481-5709500 Msa0665830:CDS 60.0%
CACCCCCAGGTACGGTGTAG+GGG - chr4_4:5708884-5708903 None:intergenic 65.0%
CACACCCCCAGGTACGGTGT+AGG - chr4_4:5708886-5708905 None:intergenic 65.0%
CTACACCGTACCTGGGGGTG+TGG + chr4_4:5708884-5708903 Msa0665830:intron 65.0%
! ACCGTACCTGGGGGTGTGGT+GGG + chr4_4:5708888-5708907 Msa0665830:intron 65.0%
ACCCACCACACCCCCAGGTA+CGG - chr4_4:5708892-5708911 None:intergenic 65.0%
! CACCGTACCTGGGGGTGTGG+TGG + chr4_4:5708887-5708906 Msa0665830:intron 70.0%
CGTTCACCCACCACACCCCC+AGG - chr4_4:5708897-5708916 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 5702444 5709882 5702444 ID=Msa0665830;Name=Msa0665830
chr4_4 mRNA 5702444 5709882 5702444 ID=Msa0665830-mRNA-1;Parent=Msa0665830;Name=Msa0665830-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0.28|0.22|1|1|1|22|169|1437
chr4_4 exon 5702444 5702784 5702444 ID=Msa0665830-mRNA-1:exon:1781;Parent=Msa0665830-mRNA-1
chr4_4 exon 5703017 5703137 5703017 ID=Msa0665830-mRNA-1:exon:1782;Parent=Msa0665830-mRNA-1
chr4_4 exon 5703230 5703403 5703230 ID=Msa0665830-mRNA-1:exon:1783;Parent=Msa0665830-mRNA-1
chr4_4 exon 5703595 5703754 5703595 ID=Msa0665830-mRNA-1:exon:1784;Parent=Msa0665830-mRNA-1
chr4_4 exon 5703942 5704018 5703942 ID=Msa0665830-mRNA-1:exon:1785;Parent=Msa0665830-mRNA-1
chr4_4 exon 5704122 5704175 5704122 ID=Msa0665830-mRNA-1:exon:1786;Parent=Msa0665830-mRNA-1
chr4_4 exon 5704269 5704661 5704269 ID=Msa0665830-mRNA-1:exon:1787;Parent=Msa0665830-mRNA-1
chr4_4 exon 5704771 5705052 5704771 ID=Msa0665830-mRNA-1:exon:1788;Parent=Msa0665830-mRNA-1
chr4_4 exon 5705151 5705467 5705151 ID=Msa0665830-mRNA-1:exon:1789;Parent=Msa0665830-mRNA-1
chr4_4 exon 5705557 5705717 5705557 ID=Msa0665830-mRNA-1:exon:1790;Parent=Msa0665830-mRNA-1
chr4_4 exon 5706003 5706106 5706003 ID=Msa0665830-mRNA-1:exon:1791;Parent=Msa0665830-mRNA-1
chr4_4 exon 5706195 5706351 5706195 ID=Msa0665830-mRNA-1:exon:1792;Parent=Msa0665830-mRNA-1
chr4_4 exon 5706434 5706523 5706434 ID=Msa0665830-mRNA-1:exon:1793;Parent=Msa0665830-mRNA-1
chr4_4 exon 5706610 5706734 5706610 ID=Msa0665830-mRNA-1:exon:1794;Parent=Msa0665830-mRNA-1
chr4_4 exon 5706832 5707164 5706832 ID=Msa0665830-mRNA-1:exon:1795;Parent=Msa0665830-mRNA-1
chr4_4 exon 5707285 5707575 5707285 ID=Msa0665830-mRNA-1:exon:1796;Parent=Msa0665830-mRNA-1
chr4_4 exon 5707665 5707748 5707665 ID=Msa0665830-mRNA-1:exon:1797;Parent=Msa0665830-mRNA-1
chr4_4 exon 5707855 5707988 5707855 ID=Msa0665830-mRNA-1:exon:1798;Parent=Msa0665830-mRNA-1
chr4_4 exon 5708084 5708311 5708084 ID=Msa0665830-mRNA-1:exon:1799;Parent=Msa0665830-mRNA-1
chr4_4 exon 5708413 5708584 5708413 ID=Msa0665830-mRNA-1:exon:1800;Parent=Msa0665830-mRNA-1
chr4_4 exon 5709076 5709330 5709076 ID=Msa0665830-mRNA-1:exon:1801;Parent=Msa0665830-mRNA-1
chr4_4 exon 5709453 5709882 5709453 ID=Msa0665830-mRNA-1:exon:1802;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5702444 5702784 5702444 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5703017 5703137 5703017 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5703230 5703403 5703230 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5703595 5703754 5703595 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5703942 5704018 5703942 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5704122 5704175 5704122 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5704269 5704661 5704269 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5704771 5705052 5704771 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5705151 5705467 5705151 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5705557 5705717 5705557 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5706003 5706106 5706003 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5706195 5706351 5706195 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5706434 5706523 5706434 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5706610 5706734 5706610 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5706832 5707164 5706832 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5707285 5707575 5707285 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5707665 5707748 5707665 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5707855 5707988 5707855 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5708084 5708311 5708084 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5708413 5708584 5708413 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5709076 5709330 5709076 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 CDS 5709453 5709713 5709453 ID=Msa0665830-mRNA-1:cds;Parent=Msa0665830-mRNA-1
chr4_4 three_prime_UTR 5709714 5709882 5709714 ID=Msa0665830-mRNA-1:three_prime_utr;Parent=Msa0665830-mRNA-1
Gene Sequence

>Msa0665830

ATGGAAGGAAGTGATATATATAGTGCAAGTAACAGTCTCCGTATGAGTATGAGAAGTTCTTCTACTACAGGTTGGAGAAACGGTACAATGGAGGCTTTTGCAAAGTCTTCGCGGCGCGAAGAAGATGATGATGAAGAAGCTCTTAAATGGGCTGCACTTGAAAAACTCCCTACTTATAACCGTTTGAGGAAAGGTTTGTTGGCAACATCGCGTGGTGCCAATGAGATTGATATAACAGATCTTGGATTTCAAGAGAAACAGAAACTGTTAGATAGGTTGATTAATGTTGCTGAAGAGGGAAATGAGAAGTTTTTGTTGAAGCTCAAGGAAAGAATTGATAGAGTTGGGATTGAGATTCCAACAATTGAAGTTAGATATGAGCACCTAAATGTTGAGGCCGAAGCTTTTGTGGGAGGCAGGGCTTTGCCAACTTTGTTGAACTCAGTTACTAATACAGTCGAGAGTATCTTGATTTCTCTCCATATTCTCACAAGCAGAAAAAAACAAATGACTATCCTTAAAGATGTAAGTGGAATAGTCAAACCTCGTAGGATGACACTGCTTCTTGGCCCTCCAAGTTCCGGAAAGACCACACTTCTTTTGGCCTTGTCAGGAAAGCTTGATCCCAATCTCAAGGTATCTGGGAGAGTGACTTATAATGGACATGGAATGGATGAATTTGTACCTCAGAGAACTGCTGCATATATTAGTCAACATGATGTTCATATTGGAGAAATGACTGTGAGGGAAACATTGGCTTTCTCAGCAAGGTGCCAAGGTGTCGGATCACGTTATGACTTGTTAGCTGAGCTGTCTAGAAGAGAAAAGGAAGCAAATATTAAGCCAGACCCAGATGTTGATGTCTTCATGAAGGCAATGGCAACTGGAGGCCAACAGGAAAGTGTAGCAACTGATTATGTACTAAAGCTTTTGGGATTGGATGTATGTGCTGATACTATGGTGGGGAATGAAATGTTGCGTGGTATATCTGGAGGACAAAGAAAGCGAGTTACCACAGGAGAGATGTTGGTTGGACCAGCAAATGCTTTATTCATGGATGAAATATCTACTGGCTTGGACAGTTCCACAACTTTCCAAATTGTGAGATCTCTTCAGCAATATGTTCACATTCTTAATGGAACCGCAGTTATCTCGTTGCTTCAGCCAGCACCTGAGACTTATGAACTTTTCGATGACATTATTCTTATATCTGATGGTGAAATTGTCTACCAAGGACCTCGAGAACATATTCTTGAATTTTTTGAATCTGTTGGTTTCAAATGTCCTGAGAGGAAAGGTGCAGCTGACTTTCTTCAAGAAGTAACTTCAAAGAAGGATCAAGAGCAGTATTGGGTAGACAGAGAAAAACCATACAGGTTTGTAACTGTTACTCAATTTGCTGAGGCATTTCAATCATACCATGTTGGGAGGAAAATCGGAGATGAGCTTGCAATTCCATTTGACAAATCTAAGAGTCATCCAGCAGCATTAACAACTAAAAAGTATGGTGTTAACAAGAAAGAGCTGTTAAAGGCTAACTTCTCAAGAGAGTATTTGCTTATGAAAAGAAATTCCTTTGTTTACATCTTCAAGATATGTCAGCTTCTCCTCATGGCAACAATTGCAATGACACTATTTTTAAGAACTGAGATGCACCGCGATTCCTTGAATGGTGGAGGTGTCTATTCTGGTGCTTTATTTTTCGCAGTAGTTATGATTATGTTTAATGGAATGGCCGAACTTTCAATGACCATTGCGAAGCTTCCTAGTTTCTACAAGCAAAGAGACCTTCTGTTTTTTCCTTCATGGGCATATGCTATACCTACATGGATCCTCAAGATTCCTATTACCTTTTTGGAAGTTGCTGCTTGGGTTTTTCTCACCTATTACGTAATAGGATTTGATCCTGATGTTACGAGGTTACTAAAGCAGTATCTTCTGCTATTACTGATAAACCAAATGGCTTCTGGATTATTTCGAGCTATTGCAGCACTTGGTAGAAACATGATTGTGGCCAACACATTTGGGTCCTTTGCACTTCTCACACTTCTTACATTAGGTGGCTTCGTTATGTCCAGAAAGGATATCAAAAGCTGGTGGATTTGGGGTTACTGGATTTCACCTATGATGTATGGACAAAATGCTATAATGGTGAATGAATTCCTTGGAGATAGTTGGAACCATTTTACACCAAATTCAAGTAAAACACTAGGAATTCAAGTTTTGGAGTCGCGTGGATTCTTCACAGAAGCACATTGGTATTGGATAGGGATTGGAGCATTGATAGGATTTATGTTTCTTTTCAACATATTATTCACTGTGGCTCTCACTTACCTTGATCCATTTGACAAGCCACAAGCAACAATAAATGAAGAATCAGAAGACAGCACAACAAATGGCACTACCCAAGAAGTTGAATTACCGCGTATAGCAAGTTCAGGAGGATCTTATAATGGTGCGGACCCTAGCCAAAGAGAGAGAAGAGGAATGGTTCTTCCTTTTGAACCGCATTCTATAGCCTTTGACGATGTTGTATATTCTGTTGACATGCCACAGGAAATGAAGGTTCAAGGGGTAATAGAGGATAGATTAGTACTTTTGAAGGGTGTCAGTGGTGCATTTAGGCCTGGTGTTCTCACAGCCTTAATGGGAGTCAGTGGAGCTGGTAAAACTACTTTAATGGATGTTTTGGCTGGTAGAAAAACCGGTGGTTATATTGACGGGAGCATAAAAATTTCTGGCTACCCTAAAAAGCAAGAAACGTTTGCTCGAATCTCCGGTTATTGTGAGCAGAATGATATCCATTCTCCTCATGTTACTGTCTATGAGTCATTGGTCTACTCGGCTTGGCTTCGTTTACCAGCAGACGTTGATTCAAATACCAGAAAGATGTTCATTGACGAAGTCATGGAACTAGTGGAGCTCAATCCATTGAGAAACTCTTTGGTTGGTTTGCCTGGTGTGAATGGTCTTTCAACCGAACAACGCAAGAGGCTAACTATTGCAGTTGAATTAGTGGCCAATCCATCCATAATTTTCATGGATGAGCCTACATCTGGATTAGATGCTAGAGCTGCTGCAATTGTAATGCGAACCGTTAGGAACACGGTTGACACAGGAAGAACAGTTGTTTGCACCATTCATCAACCAAGTATTGACATATTCGAAGCTTTTGATGAGTTATTCCTCATGAAACGCGGAGGAGAAGAAATATATGTTGGACCACTGGGTCGTCATTCTAGTCAATTGATCAAGTATTTTGAGAGCATTGGAGGGGTTAGTAAAATCAAAGATGGCTATAATCCAGCAACTTGGATGTTGGAAGTTTCAAGTTCCGCACAAGAACTTACTTTAGGAGTTGATTTTCATCACGCATACAAAAATTCTGAGTTGTACAGGAGAAACAAGCAACTTATAGAAGAATTAGGCAAACCTGCTCCTGGTTCAAATGATCTTCATTTCTCCGCCCAATACTCGCAATCATTTTTAGTCCAATGCTTGGCTTGCTTATGGAAACAACATTGGTCATATTGGCGCAACCCGCCATACACTTCTGTGAGGTTTTTCTTCACTGTTTTCATAGGCCTGATGTTTGGAACAATATTCTGGGACCTTGGAAGGAAATACTCAAATAGACAAGACCTGTTTAATGCCCTCGGTTCGATGTATACTGCTGTTCTCTTCCTTGGGGTCCAGAATTCATCGGCTGTACAACCAGTGGTAGCAGTTGAAAGATCTGTGTTCTATAGAGAAAGAGCTGCTGGGATGTATTCTGCCTTACCTTATGCATTCGCACAGGTTTTAATAGAGCTACCTTATGTTTTCGTCCAAGCTGCATCATATGGTGTCATAGTTTATGCCATGATTGGATTTGAGTGGACTCTAGCGAAGTTCTTTTGGTACATATTTTTCATGTACTGTACATTATGCTACTTCACCTTCTATGGTATGATGGCTGTAGCAATTACTCCAAATCACCATGTCGCTTCAATCGTGGCTGCTGCATTTTACGCAATTTGGAATCTTTTTTCAGGATTTATCGTTCCACGACCTATGATTCCTGTCTGGTGGAGATGGTACTACTGGGCCTGTCCAGTGTCTTGGACACTATACGGACTGATTGCATCACAATTTGGAGATATAACCAAAATCATGGAATCAGAGAATCAGACAGTTCAAGAATTCATAAGAAGTTATTTTGGTATGAAGCATGACTTCATAGGAGTTTGTGCAGTTGTGGTTGTTGGGACTGCAGTGGGCTTTGCATGTATTTTTGCTGTCTCAATCAAGTCCTTCAACTTCCAAAGACGGTAG
Protein sequence

>Msa0665830

MEGSDIYSASNSLRMSMRSSSTTGWRNGTMEAFAKSSRREEDDDEEALKWAALEKLPTYNRLRKGLLATSRGANEIDITDLGFQEKQKLLDRLINVAEEGNEKFLLKLKERIDRVGIEIPTIEVRYEHLNVEAEAFVGGRALPTLLNSVTNTVESILISLHILTSRKKQMTILKDVSGIVKPRRMTLLLGPPSSGKTTLLLALSGKLDPNLKVSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDLLAELSRREKEANIKPDPDVDVFMKAMATGGQQESVATDYVLKLLGLDVCADTMVGNEMLRGISGGQRKRVTTGEMLVGPANALFMDEISTGLDSSTTFQIVRSLQQYVHILNGTAVISLLQPAPETYELFDDIILISDGEIVYQGPREHILEFFESVGFKCPERKGAADFLQEVTSKKDQEQYWVDREKPYRFVTVTQFAEAFQSYHVGRKIGDELAIPFDKSKSHPAALTTKKYGVNKKELLKANFSREYLLMKRNSFVYIFKICQLLLMATIAMTLFLRTEMHRDSLNGGGVYSGALFFAVVMIMFNGMAELSMTIAKLPSFYKQRDLLFFPSWAYAIPTWILKIPITFLEVAAWVFLTYYVIGFDPDVTRLLKQYLLLLLINQMASGLFRAIAALGRNMIVANTFGSFALLTLLTLGGFVMSRKDIKSWWIWGYWISPMMYGQNAIMVNEFLGDSWNHFTPNSSKTLGIQVLESRGFFTEAHWYWIGIGALIGFMFLFNILFTVALTYLDPFDKPQATINEESEDSTTNGTTQEVELPRIASSGGSYNGADPSQRERRGMVLPFEPHSIAFDDVVYSVDMPQEMKVQGVIEDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGSIKISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVYSAWLRLPADVDSNTRKMFIDEVMELVELNPLRNSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGEEIYVGPLGRHSSQLIKYFESIGGVSKIKDGYNPATWMLEVSSSAQELTLGVDFHHAYKNSELYRRNKQLIEELGKPAPGSNDLHFSAQYSQSFLVQCLACLWKQHWSYWRNPPYTSVRFFFTVFIGLMFGTIFWDLGRKYSNRQDLFNALGSMYTAVLFLGVQNSSAVQPVVAVERSVFYRERAAGMYSALPYAFAQVLIELPYVFVQAASYGVIVYAMIGFEWTLAKFFWYIFFMYCTLCYFTFYGMMAVAITPNHHVASIVAAAFYAIWNLFSGFIVPRPMIPVWWRWYYWACPVSWTLYGLIASQFGDITKIMESENQTVQEFIRSYFGMKHDFIGVCAVVVVGTAVGFACIFAVSIKSFNFQRR*