AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0530990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0530990 MtrunA17_Chr4g0003981 97.914 1438 28 2 1 1437 1 1437 0.0 2918
Msa0530990 MtrunA17_Chr2g0332221 79.152 1439 286 6 1 1437 1 1427 0.0 2427
Msa0530990 MtrunA17_Chr2g0332241 79.097 1440 286 7 1 1437 1 1428 0.0 2420
Msa0530990 MtrunA17_Chr2g0332211 78.472 1440 297 6 1 1437 82 1511 0.0 2405
Msa0530990 MtrunA17_Chr4g0004021 90.227 1279 117 6 1 1277 1 1273 0.0 2336
Msa0530990 MtrunA17_Chr4g0004021 22.751 567 382 12 861 1380 166 723 1.36e-30 131
Msa0530990 MtrunA17_Chr4g0003971 75.956 1439 301 6 1 1437 1 1396 0.0 2252
Msa0530990 MtrunA17_Chr7g0262231 70.062 1453 402 7 16 1437 6 1456 0.0 2171
Msa0530990 MtrunA17_Chr7g0262241 70.223 1434 398 7 31 1437 22 1453 0.0 2151
Msa0530990 MtrunA17_Chr7g0261951 69.151 1449 418 7 16 1437 6 1452 0.0 2109
Msa0530990 MtrunA17_Chr7g0261971 68.607 1443 426 6 21 1437 7 1448 0.0 2107
Msa0530990 MtrunA17_Chr7g0262221 67.962 1467 390 9 16 1437 7 1438 0.0 2085
Msa0530990 MtrunA17_Chr1g0148841 68.454 1455 433 7 1 1437 1 1447 0.0 2083
Msa0530990 MtrunA17_Chr7g0261981 67.645 1431 426 7 16 1437 6 1408 0.0 2073
Msa0530990 MtrunA17_Chr3g0138261 67.945 1460 425 10 1 1437 1 1440 0.0 2063
Msa0530990 MtrunA17_Chr1g0148811 65.546 1428 481 5 17 1437 1 1424 0.0 1945
Msa0530990 MtrunA17_Chr7g0262251 64.330 1441 436 9 10 1433 24 1403 0.0 1944
Msa0530990 MtrunA17_Chr7g0262261 65.393 1413 448 6 40 1437 2 1388 0.0 1939
Msa0530990 MtrunA17_Chr7g0262261 52.326 86 39 1 1354 1437 1539 1624 3.40e-23 107
Msa0530990 MtrunA17_Chr7g0262261 58.333 84 34 1 33 115 1426 1509 1.12e-21 102
Msa0530990 MtrunA17_Chr7g0265981 61.437 1447 528 8 16 1437 16 1457 0.0 1849
Msa0530990 MtrunA17_Chr1g0198291 60.462 1429 540 7 31 1437 43 1468 0.0 1822
Msa0530990 MtrunA17_Chr7g0265971 60.557 1435 535 8 31 1437 32 1463 0.0 1820
Msa0530990 MtrunA17_Chr1g0171351 59.805 1433 540 7 39 1437 38 1468 0.0 1808
Msa0530990 MtrunA17_Chr4g0062871 58.989 1424 563 7 27 1437 3 1418 0.0 1778
Msa0530990 MtrunA17_Chr8g0340651 58.635 1465 552 7 25 1437 18 1480 0.0 1762
Msa0530990 MtrunA17_Chr2g0331081 58.592 1449 564 5 25 1437 18 1466 0.0 1753
Msa0530990 MtrunA17_Chr7g0265961 56.387 1456 545 10 3 1437 2 1388 0.0 1672
Msa0530990 MtrunA17_Chr0c20g0493841 53.857 1413 630 9 41 1437 25 1431 0.0 1562
Msa0530990 MtrunA17_Chr3g0104621 53.363 1368 571 7 117 1437 1 1348 0.0 1483
Msa0530990 MtrunA17_Chr5g0429871 54.575 1235 547 5 211 1437 17 1245 0.0 1394
Msa0530990 MtrunA17_Chr7g0262321 58.439 1179 429 8 271 1437 2 1131 0.0 1390
Msa0530990 MtrunA17_Chr4g0069211 54.151 1036 443 10 41 1062 25 1042 0.0 1106
Msa0530990 MtrunA17_Chr4g0069211 24.516 620 386 22 861 1427 162 752 1.77e-34 144
Msa0530990 MtrunA17_Chr7g0266001 60.954 671 255 2 115 780 6 674 0.0 870
Msa0530990 MtrunA17_Chr7g0266001 24.216 574 354 18 866 1380 63 614 1.84e-28 123
Msa0530990 MtrunA17_Chr7g0265991 63.360 625 215 2 827 1437 20 644 0.0 836
Msa0530990 MtrunA17_Chr7g0265991 22.981 644 409 18 167 780 54 640 3.99e-35 144
Msa0530990 MtrunA17_Chr7g0215001 66.755 376 103 1 1014 1367 1 376 0.0 546
Msa0530990 MtrunA17_Chr7g0215001 20.506 395 257 11 352 709 1 375 5.32e-12 69.3
Msa0530990 MtrunA17_Chr4g0069221 50.000 376 186 1 1064 1437 1 376 1.08e-132 414
Msa0530990 MtrunA17_Chr4g0069221 21.922 333 230 10 404 724 3 317 1.26e-11 68.2
Msa0530990 MtrunA17_Chr6g0472481 76.518 247 46 1 854 1088 1 247 4.94e-126 392
Msa0530990 MtrunA17_Chr6g0472481 26.068 234 140 4 167 400 8 208 1.93e-14 75.1
Msa0530990 MtrunA17_Chr4g0004001 88.439 173 20 0 1265 1437 16 188 1.81e-105 332
Msa0530990 MtrunA17_Chr7g0262331 58.373 209 80 5 41 244 2 208 7.10e-73 241
Msa0530990 MtrunA17_Chr7g0238421 50.000 260 89 4 874 1133 12 230 1.02e-67 228
Msa0530990 MtrunA17_Chr1g0208391 28.090 534 343 10 866 1378 93 606 2.92e-58 215
Msa0530990 MtrunA17_Chr1g0208391 34.495 287 137 9 165 441 86 331 1.24e-35 146
Msa0530990 MtrunA17_Chr1g0176441 27.411 591 364 15 833 1385 143 706 8.01e-55 205
Msa0530990 MtrunA17_Chr1g0176441 25.510 588 360 16 143 701 143 681 7.58e-39 156
Msa0530990 MtrunA17_Chr1g0198931 27.063 606 395 17 786 1363 25 611 1.24e-54 204
Msa0530990 MtrunA17_Chr1g0198931 26.003 623 371 22 120 707 42 609 6.49e-39 155
Msa0530990 MtrunA17_Chr1g0213091 23.645 609 400 10 829 1383 66 663 1.47e-54 205
Msa0530990 MtrunA17_Chr1g0213091 23.272 593 372 12 164 721 114 658 2.08e-35 145
Msa0530990 MtrunA17_Chr4g0050221 28.649 555 354 14 861 1392 26 561 1.37e-53 199
Msa0530990 MtrunA17_Chr4g0050221 24.204 628 414 16 162 774 21 601 8.05e-36 145
Msa0530990 MtrunA17_Chr1g0176451 28.028 578 360 15 839 1386 1 552 4.94e-53 197
Msa0530990 MtrunA17_Chr1g0176451 26.241 564 349 14 158 701 10 526 1.74e-39 156
Msa0530990 MtrunA17_Chr8g0359931 27.574 573 370 16 836 1389 34 580 6.32e-53 197
Msa0530990 MtrunA17_Chr8g0359931 25.352 568 337 18 165 711 59 560 4.05e-37 150
Msa0530990 MtrunA17_Chr5g0408061 28.063 506 308 14 815 1292 21 498 6.52e-53 197
Msa0530990 MtrunA17_Chr5g0408061 26.876 573 323 19 167 707 60 568 5.87e-41 161
Msa0530990 MtrunA17_Chr2g0316301 28.932 515 349 8 866 1379 73 571 9.66e-53 197
Msa0530990 MtrunA17_Chr2g0316301 24.960 629 376 15 166 771 67 622 1.65e-42 166
Msa0530990 MtrunA17_Chr4g0050251 28.046 517 331 12 866 1359 73 571 1.15e-52 197
Msa0530990 MtrunA17_Chr4g0050251 23.565 662 444 14 162 808 63 677 5.45e-43 168
Msa0530990 MtrunA17_Chr4g0039251 28.676 544 333 15 866 1377 93 613 3.43e-51 194
Msa0530990 MtrunA17_Chr4g0039251 25.674 631 399 15 172 778 93 677 1.84e-43 171
Msa0530990 MtrunA17_Chr4g0039261 27.586 580 360 17 866 1406 51 609 1.34e-50 191
Msa0530990 MtrunA17_Chr4g0039261 26.275 647 375 20 172 778 51 635 4.51e-46 178
Msa0530990 MtrunA17_Chr1g0200651 26.783 631 393 16 801 1384 3 611 2.05e-50 191
Msa0530990 MtrunA17_Chr1g0200651 25.709 564 345 19 168 711 86 595 1.07e-35 145
Msa0530990 MtrunA17_Chr4g0050291 27.413 518 335 12 866 1359 50 550 1.22e-48 185
Msa0530990 MtrunA17_Chr4g0050291 24.165 629 404 15 171 776 49 627 1.76e-40 160
Msa0530990 MtrunA17_Chr8g0390471 77.000 100 23 0 865 964 4 103 1.59e-48 168
Msa0530990 MtrunA17_Chr7g0263351 24.357 583 390 10 836 1378 82 653 4.82e-48 185
Msa0530990 MtrunA17_Chr7g0263351 22.409 656 421 11 172 778 127 743 1.23e-33 140
Msa0530990 MtrunA17_Chr6g0477811 25.646 542 334 13 866 1363 66 582 1.39e-47 182
Msa0530990 MtrunA17_Chr6g0477811 25.228 658 426 14 140 776 34 646 5.43e-46 177
Msa0530990 MtrunA17_Chr7g0267971 27.116 579 375 12 833 1382 132 692 1.39e-47 183
Msa0530990 MtrunA17_Chr7g0267971 26.306 555 340 15 172 701 160 670 8.80e-37 150
Msa0530990 MtrunA17_Chr1g0202431 24.615 520 361 12 866 1379 50 544 1.63e-47 181
Msa0530990 MtrunA17_Chr1g0202431 22.632 623 393 14 172 776 50 601 1.02e-35 145
Msa0530990 MtrunA17_Chr2g0318061 33.431 341 210 9 838 1176 2 327 6.56e-47 173
Msa0530990 MtrunA17_Chr2g0318061 29.668 391 221 12 168 551 27 370 2.17e-37 145
Msa0530990 MtrunA17_Chr8g0384391 24.908 546 370 11 866 1386 56 586 1.24e-45 176
Msa0530990 MtrunA17_Chr8g0384391 24.460 695 429 17 116 778 5 635 3.76e-44 171
Msa0530990 MtrunA17_Chr4g0026731 25.984 508 330 12 908 1378 22 520 1.41e-43 169
Msa0530990 MtrunA17_Chr4g0026731 23.675 604 387 16 205 774 12 575 2.34e-34 141
Msa0530990 MtrunA17_Chr1g0199471 35.656 244 151 2 866 1109 517 754 1.44e-43 173
Msa0530990 MtrunA17_Chr1g0199471 32.890 301 160 8 145 437 484 750 4.11e-33 139
Msa0530990 MtrunA17_Chr7g0264441 25.686 510 281 14 866 1299 279 766 2.02e-43 172
Msa0530990 MtrunA17_Chr7g0264441 32.384 281 154 7 163 441 270 516 2.92e-30 130
Msa0530990 MtrunA17_Chr3g0102731 29.200 500 310 15 836 1303 54 541 2.16e-43 168
Msa0530990 MtrunA17_Chr3g0102731 32.482 274 146 8 172 443 98 334 5.20e-31 130
Msa0530990 MtrunA17_Chr5g0446901 27.237 503 336 11 866 1348 109 601 2.55e-42 165
Msa0530990 MtrunA17_Chr5g0446901 30.640 297 167 7 151 443 88 349 1.25e-30 129
Msa0530990 MtrunA17_Chr5g0429861 44.560 193 97 3 31 213 18 210 2.64e-42 156
Msa0530990 MtrunA17_Chr4g0065231 23.267 649 420 16 146 776 46 634 4.84e-42 165
Msa0530990 MtrunA17_Chr4g0065231 24.762 525 368 13 866 1381 75 581 1.78e-37 151
Msa0530990 MtrunA17_Chr8g0393191 32.867 286 182 5 837 1121 41 317 2.46e-40 161
Msa0530990 MtrunA17_Chr8g0393191 25.581 301 179 6 167 457 64 329 2.86e-23 107
Msa0530990 MtrunA17_Chr8g0393191 25.893 224 160 4 1157 1380 518 735 3.08e-16 84.7
Msa0530990 MtrunA17_Chr1g0180971 33.969 262 167 2 863 1124 410 665 4.63e-40 160
Msa0530990 MtrunA17_Chr1g0180971 31.673 281 156 6 163 441 404 650 1.11e-29 127
Msa0530990 MtrunA17_Chr3g0130331 23.713 544 377 11 866 1386 58 586 1.27e-39 157
Msa0530990 MtrunA17_Chr3g0130331 23.041 638 400 16 172 778 58 635 6.55e-39 155
Msa0530990 MtrunA17_Chr4g0028621 36.475 244 149 2 866 1109 507 744 8.84e-39 158
Msa0530990 MtrunA17_Chr4g0028621 32.740 281 153 6 163 441 498 744 9.32e-27 119
Msa0530990 MtrunA17_Chr5g0411621 30.606 330 209 7 839 1160 25 342 1.77e-38 155
Msa0530990 MtrunA17_Chr5g0411621 26.950 282 170 5 167 447 46 292 1.92e-27 120
Msa0530990 MtrunA17_Chr5g0411621 22.222 234 169 4 1148 1378 441 664 4.56e-13 74.3
Msa0530990 MtrunA17_Chr4g0050201 26.582 474 308 13 908 1359 5 460 3.02e-38 152
Msa0530990 MtrunA17_Chr4g0050201 22.509 582 381 14 211 774 1 530 3.48e-26 115
Msa0530990 MtrunA17_Chr4g0050261 22.545 723 457 16 162 825 63 741 1.34e-37 152
Msa0530990 MtrunA17_Chr4g0050261 38.318 214 125 4 866 1075 73 283 7.65e-35 144
Msa0530990 MtrunA17_Chr4g0050261 21.875 256 192 4 1125 1378 383 632 1.12e-14 79.3
Msa0530990 MtrunA17_Chr4g0039231 26.236 526 298 15 927 1377 20 530 5.70e-36 146
Msa0530990 MtrunA17_Chr4g0039231 35.349 215 104 5 234 446 20 201 9.55e-30 127
Msa0530990 MtrunA17_Chr2g0327241 23.885 628 395 21 791 1378 62 646 3.82e-28 122
Msa0530990 MtrunA17_Chr2g0327241 23.283 597 373 19 158 726 112 651 7.58e-27 118
Msa0530990 MtrunA17_Chr8g0390461 45.528 123 60 2 701 816 2 124 1.08e-27 110
Msa0530990 MtrunA17_Chr8g0390481 85.714 56 7 1 996 1050 7 62 2.63e-24 97.8
Msa0530990 MtrunA17_Chr3g0093331 31.720 186 123 4 885 1067 17 201 4.02e-21 94.7
Msa0530990 MtrunA17_Chr3g0093331 26.104 249 151 3 194 441 20 236 1.63e-20 93.2
Msa0530990 MtrunA17_Chr7g0266011 42.268 97 51 1 31 122 38 134 2.43e-20 89.0
Msa0530990 MtrunA17_Chr8g0390451 48.718 78 38 1 235 310 9 86 2.43e-18 81.3
Msa0530990 MtrunA17_Chr4g0047831 37.805 82 51 0 983 1064 1 82 2.88e-12 64.3
Msa0530990 MtrunA17_Chr7g0238411 36.364 88 45 2 605 692 27 103 1.50e-11 62.8
Msa0530990 MtrunA17_Chr7g0261961 55.102 49 22 0 1389 1437 22 70 9.83e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0530990 AT1G15520.1 72.292 1440 379 5 1 1437 1 1423 0.0 2205
Msa0530990 AT1G15520.2 73.092 1271 322 5 1 1268 1 1254 0.0 1952
Msa0530990 AT1G15520.2 23.520 625 395 19 861 1425 164 765 1.37e-35 148
Msa0530990 AT2G36380.1 60.873 1444 528 9 16 1437 25 1453 0.0 1851
Msa0530990 AT1G66950.1 60.126 1432 547 7 21 1437 32 1454 0.0 1843
Msa0530990 AT1G15210.1 59.834 1449 547 8 8 1437 10 1442 0.0 1792
Msa0530990 AT2G26910.1 59.254 1421 566 7 27 1437 3 1420 0.0 1777
Msa0530990 AT3G16340.1 59.085 1442 545 7 3 1437 13 1416 0.0 1776
Msa0530990 AT1G59870.1 59.418 1444 541 9 31 1437 34 1469 0.0 1773
Msa0530990 AT3G16340.2 58.807 1442 544 8 3 1437 13 1411 0.0 1760
Msa0530990 AT3G30842.1 56.655 1405 578 8 47 1437 31 1418 0.0 1662
Msa0530990 AT2G29940.1 54.208 1426 615 7 31 1437 20 1426 0.0 1608
Msa0530990 AT3G53480.1 51.811 1436 674 9 12 1437 23 1450 0.0 1543
Msa0530990 AT2G37280.1 51.209 1406 665 9 42 1437 19 1413 0.0 1526
Msa0530990 AT2G37280.3 50.244 1435 664 10 42 1437 19 1442 0.0 1513
Msa0530990 AT2G37280.2 52.161 1319 612 8 42 1352 19 1326 0.0 1454
Msa0530990 AT2G37280.2 25.786 636 393 22 854 1429 140 756 1.11e-37 155
Msa0530990 AT4G15230.3 49.260 1419 684 10 26 1437 11 1400 0.0 1438
Msa0530990 AT4G15230.1 49.260 1419 684 10 26 1437 11 1400 0.0 1438
Msa0530990 AT4G15215.9 49.501 1402 672 11 43 1437 22 1394 0.0 1437
Msa0530990 AT4G15215.4 49.501 1402 672 11 43 1437 22 1394 0.0 1437
Msa0530990 AT4G15215.5 49.501 1402 672 11 43 1437 22 1394 0.0 1437
Msa0530990 AT4G15215.3 49.501 1402 672 11 43 1437 22 1394 0.0 1437
Msa0530990 AT4G15215.2 49.501 1402 672 11 43 1437 22 1394 0.0 1437
Msa0530990 AT4G15215.11 49.501 1402 672 11 43 1437 25 1397 0.0 1437
Msa0530990 AT4G15233.1 49.112 1407 672 10 40 1437 21 1392 0.0 1434
Msa0530990 AT4G15236.1 48.624 1417 684 10 30 1437 9 1390 0.0 1424
Msa0530990 AT4G15215.1 49.144 1402 670 12 43 1437 25 1390 0.0 1418
Msa0530990 AT4G15215.8 49.144 1402 670 12 43 1437 22 1387 0.0 1417
Msa0530990 AT4G15215.10 49.144 1402 670 12 43 1437 22 1387 0.0 1417
Msa0530990 AT4G15215.6 49.144 1402 670 12 43 1437 22 1387 0.0 1417
Msa0530990 AT4G15215.7 49.144 1402 670 12 43 1437 22 1387 0.0 1417
Msa0530990 AT4G15233.3 49.817 1365 647 8 76 1437 1 1330 0.0 1415
Msa0530990 AT4G15233.6 49.817 1365 647 8 76 1437 1 1330 0.0 1415
Msa0530990 AT2G37280.4 52.226 1258 587 6 184 1437 8 1255 0.0 1411
Msa0530990 AT4G15233.7 48.614 1407 661 11 40 1437 21 1374 0.0 1406
Msa0530990 AT4G15233.8 48.472 1407 672 11 40 1437 21 1383 0.0 1405
Msa0530990 AT4G15230.4 50.185 1349 639 9 93 1437 2 1321 0.0 1404
Msa0530990 AT4G15233.2 49.018 1375 635 10 40 1383 21 1360 0.0 1389
Msa0530990 AT4G15230.2 49.925 1338 632 10 26 1354 11 1319 0.0 1369
Msa0530990 AT4G15230.2 24.956 569 361 17 861 1378 151 704 1.63e-37 154
Msa0530990 AT4G15233.5 48.242 711 342 5 76 785 1 686 0.0 704
Msa0530990 AT4G15233.5 54.101 573 261 1 867 1437 677 1249 0.0 666
Msa0530990 AT4G15233.5 26.399 572 360 17 863 1394 90 640 2.89e-38 157
Msa0530990 AT4G15233.5 23.519 557 362 13 181 724 685 1190 1.41e-36 151
Msa0530990 AT4G15233.4 48.242 711 342 5 76 785 1 686 0.0 704
Msa0530990 AT4G15233.4 54.101 573 261 1 867 1437 677 1249 0.0 666
Msa0530990 AT4G15233.4 26.399 572 360 17 863 1394 90 640 2.89e-38 157
Msa0530990 AT4G15233.4 23.519 557 362 13 181 724 685 1190 1.41e-36 151
Msa0530990 AT2G01320.1 29.190 531 341 10 866 1378 90 603 7.69e-63 229
Msa0530990 AT2G01320.1 25.207 603 374 14 165 747 83 628 7.10e-39 157
Msa0530990 AT2G01320.4 29.190 531 341 10 866 1378 90 603 7.69e-63 229
Msa0530990 AT2G01320.4 25.207 603 374 14 165 747 83 628 7.10e-39 157
Msa0530990 AT2G01320.2 29.190 531 341 10 866 1378 90 603 9.75e-63 229
Msa0530990 AT2G01320.2 25.207 603 374 14 165 747 83 628 8.10e-39 156
Msa0530990 AT2G01320.3 29.190 531 341 10 866 1378 90 603 1.04e-62 229
Msa0530990 AT2G01320.3 25.207 603 374 14 165 747 83 628 8.61e-39 156
Msa0530990 AT2G01320.8 29.026 534 344 10 866 1381 90 606 1.36e-62 227
Msa0530990 AT2G01320.8 25.342 584 360 14 165 728 83 610 4.97e-39 156
Msa0530990 AT2G01320.5 29.026 534 344 10 866 1381 90 606 1.36e-62 227
Msa0530990 AT2G01320.5 25.342 584 360 14 165 728 83 610 4.97e-39 156
Msa0530990 AT3G55100.1 25.000 584 405 11 832 1396 15 584 3.53e-58 214
Msa0530990 AT3G55100.1 23.744 577 366 18 165 721 44 566 8.56e-35 143
Msa0530990 AT3G55100.2 25.000 584 405 11 832 1396 15 584 3.53e-58 214
Msa0530990 AT3G55100.2 23.744 577 366 18 165 721 44 566 8.56e-35 143
Msa0530990 AT2G37360.1 26.043 599 396 12 836 1401 95 679 7.18e-56 209
Msa0530990 AT2G37360.1 23.242 654 411 13 172 774 133 746 1.81e-37 152
Msa0530990 AT3G55130.1 24.768 646 414 17 778 1383 21 634 8.43e-56 208
Msa0530990 AT3G55130.1 24.419 602 373 16 171 744 98 645 1.34e-33 140
Msa0530990 AT2G01320.7 30.667 450 277 10 866 1297 90 522 7.07e-55 201
Msa0530990 AT2G01320.7 34.965 286 141 8 165 443 83 330 1.98e-38 152
Msa0530990 AT2G01320.6 30.667 450 277 10 866 1297 90 522 7.07e-55 201
Msa0530990 AT2G01320.6 34.965 286 141 8 165 443 83 330 1.98e-38 152
Msa0530990 AT3G55090.1 22.900 607 411 9 836 1401 70 660 2.26e-54 204
Msa0530990 AT3G55090.1 24.023 691 385 20 164 776 99 727 5.18e-33 138
Msa0530990 AT5G06530.2 27.375 621 374 14 833 1415 151 732 8.55e-54 202
Msa0530990 AT5G06530.2 25.725 552 347 15 172 701 179 689 1.90e-36 149
Msa0530990 AT5G06530.1 27.375 621 374 14 833 1415 151 732 8.55e-54 202
Msa0530990 AT5G06530.1 25.725 552 347 15 172 701 179 689 1.90e-36 149
Msa0530990 AT3G53510.1 27.156 545 350 12 865 1383 125 648 5.41e-53 200
Msa0530990 AT3G53510.1 24.694 571 356 13 172 721 126 643 5.23e-32 135
Msa0530990 AT1G71960.1 28.964 618 363 20 818 1386 12 602 7.44e-53 198
Msa0530990 AT1G71960.1 24.603 630 411 16 164 776 75 657 1.04e-37 152
Msa0530990 AT1G53270.1 25.651 538 374 9 849 1381 31 547 1.30e-52 196
Msa0530990 AT1G53270.1 25.366 615 364 14 163 754 41 583 7.26e-40 158
Msa0530990 AT4G27420.1 26.995 589 391 14 835 1404 33 601 1.69e-52 197
Msa0530990 AT4G27420.1 26.970 571 355 15 147 701 33 557 2.70e-38 154
Msa0530990 AT5G06530.3 27.899 552 339 11 833 1348 151 679 1.77e-52 197
Msa0530990 AT5G06530.3 25.926 540 337 15 172 689 179 677 2.51e-35 145
Msa0530990 AT3G55110.1 24.429 569 398 11 836 1383 60 617 1.94e-52 198
Msa0530990 AT3G55110.1 24.593 675 415 20 73 721 6 612 4.72e-36 147
Msa0530990 AT1G31770.1 27.841 528 338 13 785 1292 2 506 2.77e-52 196
Msa0530990 AT1G31770.1 26.842 570 359 14 166 726 75 595 8.72e-44 171
Msa0530990 AT5G13580.1 24.185 583 396 10 836 1383 65 636 7.98e-52 196
Msa0530990 AT5G13580.1 22.667 600 395 12 162 744 100 647 6.18e-30 129
Msa0530990 AT3G21090.1 26.351 592 376 12 866 1415 45 618 8.04e-52 196
Msa0530990 AT3G21090.1 25.117 641 386 15 172 776 45 627 5.25e-44 172
Msa0530990 AT3G25620.2 28.546 571 354 18 822 1359 49 598 8.43e-52 195
Msa0530990 AT3G25620.2 27.094 561 338 18 167 707 94 603 1.43e-40 161
Msa0530990 AT2G39350.1 23.116 597 399 10 836 1383 64 649 1.58e-51 196
Msa0530990 AT2G39350.1 23.495 681 405 15 164 776 101 733 1.18e-33 140
Msa0530990 AT1G17840.1 28.411 535 328 14 866 1363 69 585 1.12e-50 192
Msa0530990 AT1G17840.1 28.288 555 338 15 172 711 69 578 1.92e-41 164
Msa0530990 AT1G51500.1 28.333 540 342 12 866 1377 44 566 3.02e-48 185
Msa0530990 AT1G51500.1 25.796 628 400 13 172 776 44 628 1.97e-46 179
Msa0530990 AT5G06530.4 27.291 502 311 9 883 1348 1 484 6.22e-47 177
Msa0530990 AT5G06530.4 25.430 523 327 15 189 689 1 482 2.90e-33 136
Msa0530990 AT2G13610.1 25.599 543 367 13 866 1386 62 589 9.55e-47 179
Msa0530990 AT2G13610.1 23.333 630 414 13 112 721 1 581 2.40e-38 154
Msa0530990 AT3G25620.1 37.542 301 164 10 822 1111 49 336 2.14e-45 171
Msa0530990 AT3G25620.1 35.764 288 145 10 167 450 94 345 3.62e-38 150
Msa0530990 AT5G52860.1 25.338 517 345 12 866 1379 44 522 2.46e-44 171
Msa0530990 AT5G52860.1 21.914 648 402 16 147 776 19 580 9.14e-31 130
Msa0530990 AT1G53390.1 30.816 331 205 4 779 1109 454 760 1.14e-43 174
Msa0530990 AT1G53390.1 30.961 281 158 6 163 441 514 760 2.72e-30 131
Msa0530990 AT3G13220.1 26.208 538 337 15 866 1372 106 614 3.04e-42 166
Msa0530990 AT3G13220.1 24.433 573 361 15 172 724 106 626 2.02e-29 127
Msa0530990 AT4G25750.1 23.314 519 355 14 866 1379 30 510 7.34e-42 164
Msa0530990 AT4G25750.1 21.725 626 392 13 162 771 20 563 2.05e-31 132
Msa0530990 AT2G37010.2 33.935 277 165 4 845 1109 467 737 3.32e-40 163
Msa0530990 AT2G37010.2 32.971 276 149 6 163 436 491 732 6.98e-31 132
Msa0530990 AT2G37010.1 33.935 277 165 4 845 1109 467 737 3.32e-40 163
Msa0530990 AT2G37010.1 32.971 276 149 6 163 436 491 732 6.98e-31 132
Msa0530990 AT1G51460.1 24.487 633 414 13 172 778 30 624 4.67e-37 150
Msa0530990 AT1G51460.1 39.048 210 124 3 866 1074 30 236 1.33e-32 137
Msa0530990 AT1G51460.1 26.500 200 137 4 1179 1377 370 560 1.81e-12 72.8
Msa0530990 AT5G60740.1 35.656 244 151 2 866 1109 515 752 6.00e-37 152
Msa0530990 AT5G60740.1 32.384 281 154 6 163 441 506 752 8.63e-27 119
Msa0530990 AT5G19410.2 24.376 521 360 13 866 1378 75 569 2.12e-36 148
Msa0530990 AT5G19410.2 23.377 616 385 13 172 771 75 619 1.69e-34 142
Msa0530990 AT5G19410.1 24.376 521 360 13 866 1378 66 560 2.65e-36 147
Msa0530990 AT5G19410.1 23.377 616 385 13 172 771 66 610 1.46e-34 142
Msa0530990 AT2G28070.2 23.917 577 374 16 166 724 127 656 2.57e-30 130
Msa0530990 AT2G28070.2 22.340 658 447 21 783 1405 53 681 3.44e-28 123
Msa0530990 AT2G28070.1 23.917 577 374 16 166 724 127 656 2.57e-30 130
Msa0530990 AT2G28070.1 22.340 658 447 21 783 1405 53 681 3.44e-28 123

Find 329 sgRNAs with CRISPR-Local

Find 486 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATTCCACTTACATCTTTA+AGG 0.054816 4_1:-5089935 None:intergenic
ATTCTCTGATTCCATGATTT+TGG 0.156341 4_1:-5096155 None:intergenic
GCTTTAAATACTAACCTTTC+TGG 0.187300 4_1:-5093809 None:intergenic
CATTGTGTCCTCCAGGTATC+TGG 0.218800 4_1:+5090232 Msa0530990:intron
TCCAATGCTTGGCTTGCTTA+TGG 0.218820 4_1:+5094828 Msa0530990:CDS
GTAGTTATGATTATGTTTAA+TGG 0.223437 4_1:+5091908 Msa0530990:CDS
TTTCTCACCTATTACGTAAT+AGG 0.226901 4_1:+5092076 Msa0530990:CDS
CGGAAAGACCACACTTCTTT+TGG 0.237237 4_1:+5090001 Msa0530990:CDS
GCTGGTGGATTTGGGGTTAC+TGG 0.237327 4_1:+5092667 Msa0530990:CDS
ATGATGAAGAAGCTCTTAAA+TGG 0.238632 4_1:+5089207 Msa0530990:CDS
TTATGCTACTTCACCTTCTA+TGG 0.241083 4_1:+5095813 Msa0530990:CDS
CAAAAGAAGTGTGGTCTTTC+CGG 0.247934 4_1:-5090000 None:intergenic
AAGTTCCCTTGGTTCAAATT+TGG 0.252771 4_1:+5096446 Msa0530990:three_prime_UTR
TGATGTTTGGAACAATATTC+TGG 0.253712 4_1:+5094924 Msa0530990:CDS
CTGATAAACCAAATGGCTTC+TGG 0.254805 4_1:+5092237 Msa0530990:CDS
AACTACTTTAATGGATGTTT+TGG 0.255523 4_1:+5093597 Msa0530990:CDS
GAATTCATAAGAAGTTATTT+TGG 0.260338 4_1:+5096190 Msa0530990:CDS
AAGCTTCTGCCTCAACATTT+AGG 0.262567 4_1:-5089711 None:intergenic
TACGCGGTAATTCAACTTCT+TGG 0.263384 4_1:-5093150 None:intergenic
CAATCCATTGAGAAACTCTT+TGG 0.265608 4_1:+5093972 Msa0530990:CDS
CCATTCCTCTTCTCTCTCTT+TGG 0.265883 4_1:-5093299 None:intergenic
TCTTTCTGCTTGTGAGAATA+TGG 0.267323 4_1:-5089899 None:intergenic
TATACTGCTGTTCTCTTCCT+TGG 0.274793 4_1:+5095105 Msa0530990:CDS
CAATATGTTCACATTCTAAA+TGG 0.277031 4_1:+5091110 Msa0530990:CDS
ATATCAAAAGCTGGTGGATT+TGG 0.279555 4_1:+5092658 Msa0530990:CDS
AACTCTTTGGTTGGTTTGCC+TGG 0.281969 4_1:+5093985 Msa0530990:CDS
ATGATTGTGGCCAACACATT+TGG 0.284790 4_1:+5092294 Msa0530990:CDS
TATCAAAAGCTGGTGGATTT+GGG 0.286764 4_1:+5092659 Msa0530990:CDS
GGACTGATTGCATCACAATT+TGG 0.287375 4_1:+5096124 Msa0530990:CDS
AATGGTGGAGGTGTCTATTC+TGG 0.290861 4_1:+5091869 Msa0530990:CDS
GTTGTACAGCCGATGAATTC+TGG 0.293954 4_1:-5095131 None:intergenic
GCTGAAGAGATCTCACAATT+TGG 0.296361 4_1:-5091088 None:intergenic
AGCTGGTAAAACTACTTTAA+TGG 0.305956 4_1:+5093588 Msa0530990:CDS
AACACTAGGAATTCAAGTTT+TGG 0.307804 4_1:+5092867 Msa0530990:CDS
AGAGTCCAATCTACCGTCTT+TGG 0.311778 4_1:-5096312 None:intergenic
AGGCTCATCCATGAAAATTA+TGG 0.319454 4_1:-5094076 None:intergenic
CTTCTCACACTTCTTACATT+AGG 0.320704 4_1:+5092327 Msa0530990:CDS
TAACAAGAAGGAACTGTTAA+AGG 0.321093 4_1:+5091614 Msa0530990:CDS
GGAAACAACATTGGTCATAT+TGG 0.322767 4_1:+5094849 Msa0530990:CDS
ATACTGCTGTTCTCTTCCTT+GGG 0.322926 4_1:+5095106 Msa0530990:CDS
GGACTCTAGCGAAGTTCTTT+TGG 0.325001 4_1:+5095766 Msa0530990:CDS
AAGCAACTTATAGAAGAATT+AGG 0.334783 4_1:+5094743 Msa0530990:CDS
TGGTGTTCTCACAGCCTTAA+TGG 0.339869 4_1:+5093555 Msa0530990:CDS
GAGATTGATATAACAGATCT+TGG 0.342663 4_1:+5089302 Msa0530990:CDS
TCACAGAAGCACATTGGTAT+TGG 0.344055 4_1:+5092905 Msa0530990:CDS
AGTCAACATGATGTTCATAT+TGG 0.347722 4_1:+5090319 Msa0530990:CDS
ATCAAATCCTATTACGTAAT+AGG 0.348599 4_1:-5092083 None:intergenic
AGCTCCACTGACTCCCATTA+AGG 0.358533 4_1:-5093569 None:intergenic
CCAAGCAGCAACTTCCAAAA+AGG 0.361758 4_1:-5092050 None:intergenic
CGCAATGGTCATTGAAAGTT+CGG 0.366475 4_1:-5091936 None:intergenic
CTTCTTGGTCCTCCAAGTTC+CGG 0.369515 4_1:+5089981 Msa0530990:CDS
TTTGTGATCCATAGACTTGT+TGG 0.370220 4_1:+5090580 Msa0530990:intron
TCCGCACAAGAACTTACTTT+AGG 0.370339 4_1:+5094576 Msa0530990:CDS
CCTCTTCTCTCTCTTTGGCT+AGG 0.372487 4_1:-5093294 None:intergenic
ATTGAAGCGACATGGTGATT+TGG 0.374997 4_1:-5095858 None:intergenic
TCTGGTGGAGATGGTACTAC+TGG 0.376952 4_1:+5096074 Msa0530990:CDS
CGTAGGATGACACTGCTTCT+TGG 0.379335 4_1:+5089966 Msa0530990:CDS
TCCCTACTTATAACCGTTTG+AGG 0.382563 4_1:+5089246 Msa0530990:CDS
TGATTGTGGCCAACACATTT+GGG 0.384175 4_1:+5092295 Msa0530990:CDS
ATCATTCTGCTCACAATAAC+CGG 0.386543 4_1:-5093704 None:intergenic
CCAGTGTCTTGGACACTATA+CGG 0.387686 4_1:+5096103 Msa0530990:CDS
GTTTGTGCAGTTGTGGTTGT+TGG 0.388720 4_1:+5096235 Msa0530990:CDS
GAAATAATCCAGAAGCCATT+TGG 0.392475 4_1:-5092245 None:intergenic
TGGACTCTATCAGCCAAGTT+TGG 0.397301 4_1:+5096327 Msa0530990:three_prime_UTR
GTCATAGTTTATGCCATGAT+TGG 0.397925 4_1:+5095735 Msa0530990:CDS
CTCTTCTCTCTCTTTGGCTA+GGG 0.399589 4_1:-5093293 None:intergenic
GTTGGTTTGCCTGGTGTGAA+TGG 0.401245 4_1:+5093994 Msa0530990:CDS
AACTTCCAAAGACGGTAGAT+TGG 0.403885 4_1:+5096307 Msa0530990:exon
GGATGTATGTGCTGATACTA+TGG 0.404455 4_1:+5090932 Msa0530990:CDS
ACTTCCAACATCCAAGTTGC+TGG 0.404502 4_1:-5094546 None:intergenic
AACTCTCTTTCTTTGTCCTC+CGG 0.404861 4_1:-5090982 None:intergenic
GAAACGTTTGCTCGAATCTC+CGG 0.405322 4_1:+5093685 Msa0530990:CDS
TGGATTTCACCTATGATGTA+TGG 0.406967 4_1:+5092687 Msa0530990:CDS
GGTGTTCTCACAGCCTTAAT+GGG 0.407554 4_1:+5093556 Msa0530990:CDS
TGACTCTTAGATTTGTCAAA+TGG 0.407932 4_1:-5091558 None:intergenic
GATATACAGGCAATGGCAAC+TGG 0.410008 4_1:+5090765 Msa0530990:intron
TTCATGGATGAGCCTACATC+TGG 0.410188 4_1:+5094084 Msa0530990:CDS
TCTGGGAGAGTGACTTATAA+TGG 0.411926 4_1:+5090250 Msa0530990:CDS
AGTGTGGTCTTTCCGGAACT+TGG 0.414251 4_1:-5089993 None:intergenic
ATAGGGATTGGAGCATTGAT+AGG 0.418944 4_1:+5092928 Msa0530990:CDS
ACCAGCAAATGCTCTATTCA+TGG 0.419264 4_1:+5091028 Msa0530990:CDS
TTCTATAGAGAAAGAGCTGC+TGG 0.420185 4_1:+5095180 Msa0530990:CDS
TCATATCTAACTTCAATTGT+TGG 0.420690 4_1:-5089685 None:intergenic
AGAAGGATCAAGAGCAGTAT+TGG 0.421263 4_1:+5091433 Msa0530990:CDS
AACTATTGCAGTTGAATTAG+TGG 0.421851 4_1:+5094044 Msa0530990:CDS
GAAGGATCAAGAGCAGTATT+GGG 0.423484 4_1:+5091434 Msa0530990:CDS
CCGTTTGAGGAAAGGTTTGT+TGG 0.423645 4_1:+5089259 Msa0530990:CDS
ACGCGGTAATTCAACTTCTT+GGG 0.426367 4_1:-5093149 None:intergenic
ATTACCTGTGCGAACGCATA+AGG 0.427836 4_1:-5095219 None:intergenic
TTTGTGCAGTTGTGGTTGTT+GGG 0.431314 4_1:+5096236 Msa0530990:CDS
TTCATGAAGACATCAACATC+TGG 0.434130 4_1:-5090647 None:intergenic
TTCGACAGATGATTCCTGTC+TGG 0.434742 4_1:+5096056 Msa0530990:intron
AATGGCAACTGGAGGCCAAC+AGG 0.435462 4_1:+5090776 Msa0530990:CDS
GTATGGACAAAATGCTATAA+TGG 0.439160 4_1:+5092704 Msa0530990:CDS
GCTTCGAATATGTCAATACT+TGG 0.439363 4_1:-5094195 None:intergenic
GGTATGAAGCATGACTTCAT+AGG 0.440156 4_1:+5096211 Msa0530990:CDS
AATTGTTATGCAGCAAGTTC+AGG 0.440629 4_1:+5093249 Msa0530990:intron
AGTTAGCCTCTTGCGTTGTT+CGG 0.441081 4_1:-5094025 None:intergenic
TATGATTATGTTTAATGGAA+TGG 0.443113 4_1:+5091913 Msa0530990:CDS
ACTGGGCCTGTCCAGTGTCT+TGG 0.444264 4_1:+5096092 Msa0530990:CDS
TTCTAATTGGCAGGAAATGA+AGG 0.444324 4_1:+5093471 Msa0530990:intron
TTCCTCAAACGGTTATAAGT+AGG 0.445280 4_1:-5089248 None:intergenic
ATGAATTCCTTGGAGATAGT+TGG 0.446688 4_1:+5092730 Msa0530990:CDS
TTGATTAATGTTGCTGAAGA+GGG 0.446947 4_1:+5089356 Msa0530990:CDS
CATTGGTATTGGATAGGGAT+TGG 0.447361 4_1:+5092916 Msa0530990:CDS
TTCGTCCAAGCTGCATCATA+TGG 0.448766 4_1:+5095711 Msa0530990:CDS
CATGAAAATTATGGATGGAT+TGG 0.448912 4_1:-5094067 None:intergenic
TCGAACCGAGGGCATTAAAC+AGG 0.450752 4_1:-5095080 None:intergenic
CAAGGTGTCGGATCACGTTA+TGG 0.450941 4_1:+5090385 Msa0530990:CDS
TGTTACTGTCTATGAGTCAT+TGG 0.452446 4_1:+5093741 Msa0530990:CDS
TACAGCCATCATACCATAGA+AGG 0.453791 4_1:-5095826 None:intergenic
GCTATAGAATGCGGTTCAAA+AGG 0.454048 4_1:-5093327 None:intergenic
AGAATATTGTTCCAAACATC+AGG 0.455884 4_1:-5094922 None:intergenic
ATGAGAAGTTCTTCTACTAC+AGG 0.458702 4_1:+5089128 Msa0530990:CDS
CCAACAAACCTTTCCTCAAA+CGG 0.459659 4_1:-5089259 None:intergenic
CTACCGTCTTTGGAAGTTGA+AGG 0.459862 4_1:-5096302 None:intergenic
CATTTCAATCATACCATGTT+GGG 0.460284 4_1:+5091508 Msa0530990:CDS
ATCTGTTATATCAATCTCAT+TGG 0.460720 4_1:-5089297 None:intergenic
GTAACTGAGTTCAACAAAGT+TGG 0.461084 4_1:-5089754 None:intergenic
TACCATGTTGGGAGGAGAAT+CGG 0.464092 4_1:+5091519 Msa0530990:CDS
GTCAGTGGTGCATTTAGGCC+TGG 0.465084 4_1:+5093535 Msa0530990:CDS
CCAACCAAAGAGTTTCTCAA+TGG 0.466340 4_1:-5093976 None:intergenic
GCTAGAAAACTAAGTTCCCT+TGG 0.467624 4_1:+5096435 Msa0530990:three_prime_UTR
AAGAACTTCTCATACTAAAC+CGG 0.467830 4_1:-5089118 None:intergenic
GAAATGTTGCGTGGTATCTC+CGG 0.470006 4_1:+5090963 Msa0530990:CDS
CATAAGTCTCTGGTGCTGGC+TGG 0.470665 4_1:-5091154 None:intergenic
GTAACAGTTACAAACCTGTA+TGG 0.470750 4_1:-5091471 None:intergenic
TCCATGAATAGAGCATTTGC+TGG 0.471527 4_1:-5091029 None:intergenic
TCTGTTGTTTAGAGCATTGG+AGG 0.472013 4_1:+5094495 Msa0530990:intron
GTTCTTTACCTCGTAACATC+AGG 0.474346 4_1:-5092106 None:intergenic
GATGTTTGGAACAATATTCT+GGG 0.475693 4_1:+5094925 Msa0530990:CDS
CTCACACTTCTTACATTAGG+TGG 0.476820 4_1:+5092330 Msa0530990:CDS
AGTTCAGGAGGATCTTATAA+TGG 0.478848 4_1:+5093264 Msa0530990:CDS
TCAGCTGCACCTTTCCTCTC+AGG 0.479298 4_1:-5091278 None:intergenic
GCTATTACTGATAAACCAAA+TGG 0.479826 4_1:+5092230 Msa0530990:CDS
CCATTGAGAAACTCTTTGGT+TGG 0.480266 4_1:+5093976 Msa0530990:CDS
CTTCACCTTCTATGGTATGA+TGG 0.480887 4_1:+5095821 Msa0530990:CDS
CTATGAGTCATTGGTCTACT+CGG 0.481106 4_1:+5093750 Msa0530990:CDS
GGAACAATATTCTGGGACCT+TGG 0.482766 4_1:+5094932 Msa0530990:CDS
AAAATGGAAAGAAGTGAAGA+TGG 0.483456 4_1:-5096360 None:intergenic
GAAGGTTCAAGGGGTAATAG+AGG 0.484401 4_1:+5093489 Msa0530990:CDS
AGAAATATATGTTGGACCAC+TGG 0.484634 4_1:+5094343 Msa0530990:CDS
TCAGAAGACAGCACAACAAA+TGG 0.484753 4_1:+5093121 Msa0530990:CDS
TGGAGATATAACCAAAATCA+TGG 0.485125 4_1:+5096144 Msa0530990:CDS
AAGACATCAACATCTGGGTC+TGG 0.485299 4_1:-5090641 None:intergenic
CGCGATTCCTTGAATGGTGG+AGG 0.485931 4_1:+5091857 Msa0530990:CDS
ACTATCCTTAAAGATGTAAG+TGG 0.487406 4_1:+5089930 Msa0530990:CDS
TCCTCAAACGGTTATAAGTA+GGG 0.488325 4_1:-5089247 None:intergenic
GACATTATTCTTATATCTGA+TGG 0.488390 4_1:+5091188 Msa0530990:CDS
ATTGTGTCCTCCAGGTATCT+GGG 0.488853 4_1:+5090233 Msa0530990:intron
TCCATAAGCAAGCCAAGCAT+TGG 0.491584 4_1:-5094829 None:intergenic
TTACATCTTCAAGATATGTC+AGG 0.491740 4_1:+5091683 Msa0530990:CDS
TTCATGGATGAAATATCTAC+TGG 0.493370 4_1:+5091044 Msa0530990:CDS
ATAGACACCTCCACCATTCA+AGG 0.493961 4_1:-5091864 None:intergenic
CAGTTGCTACACTTTCCTGT+TGG 0.494237 4_1:-5090791 None:intergenic
TCGAAAAGTTCATAAGTCTC+TGG 0.494561 4_1:-5091164 None:intergenic
CTTGCAGGTAACTTCAAAGA+AGG 0.494941 4_1:+5091416 Msa0530990:intron
TCACTTACTATTTCCTTCCA+AGG 0.498008 4_1:-5094949 None:intergenic
TCTTCATTTATTGTTGCTTG+TGG 0.502052 4_1:-5093097 None:intergenic
ACTCTATCAGCCAAGTTTGG+TGG 0.502201 4_1:+5096330 Msa0530990:three_prime_UTR
TTAATGGGAGTCAGTGGAGC+TGG 0.504309 4_1:+5093571 Msa0530990:CDS
AAGCACATTGGTATTGGATA+GGG 0.507109 4_1:+5092911 Msa0530990:CDS
CAATATTCTGGGACCTTGGA+AGG 0.507958 4_1:+5094936 Msa0530990:CDS
CATAGGAGTTTGTGCAGTTG+TGG 0.508154 4_1:+5096228 Msa0530990:CDS
AGTCATTGGTCTACTCGGCT+TGG 0.508375 4_1:+5093755 Msa0530990:CDS
AGATCATTTGAACCAGGAGC+AGG 0.509530 4_1:-5094770 None:intergenic
ATGCACCGCGATTCCTTGAA+TGG 0.509937 4_1:+5091851 Msa0530990:CDS
GTTGATTAATGTTGCTGAAG+AGG 0.510170 4_1:+5089355 Msa0530990:CDS
TGGCAGGAAATGAAGGTTCA+AGG 0.513165 4_1:+5093478 Msa0530990:intron
CTTCTCCTCCGCGTTTCATG+AGG 0.514054 4_1:-5094322 None:intergenic
GAAATATATGTTGGACCACT+GGG 0.515303 4_1:+5094344 Msa0530990:CDS
AGCAACTGATTATGTACTAA+AGG 0.517484 4_1:+5090806 Msa0530990:CDS
GAATTAGGCAAACCTGCTCC+TGG 0.521206 4_1:+5094758 Msa0530990:CDS
GGATGAAATATCTACTGGCT+TGG 0.521956 4_1:+5091049 Msa0530990:CDS
CTGTTGTTTAGAGCATTGGA+GGG 0.522622 4_1:+5094496 Msa0530990:intron
GTGGTTGTTGGGACTGCAGT+GGG 0.524971 4_1:+5096247 Msa0530990:CDS
ACTTATAACCGTTTGAGGAA+AGG 0.525289 4_1:+5089251 Msa0530990:CDS
GAAGCACATTGGTATTGGAT+AGG 0.525857 4_1:+5092910 Msa0530990:CDS
TGAGCTGTCTAGAAGAGAAA+AGG 0.525977 4_1:+5090604 Msa0530990:CDS
TCTCTTTGCTTGTAGAAACT+AGG 0.526376 4_1:-5091965 None:intergenic
GACTTATAATGGACATGGAA+TGG 0.526925 4_1:+5090261 Msa0530990:CDS
AACGAAGTTACTCACGATCA+AGG 0.527333 4_1:-5092996 None:intergenic
TCTCACAATTTGGAAAGTTG+TGG 0.527580 4_1:-5091078 None:intergenic
GAAGTTGAATTACCGCGTAT+AGG 0.527910 4_1:+5093154 Msa0530990:CDS
AGGGTGTCAGTGGTGCATTT+AGG 0.530385 4_1:+5093530 Msa0530990:CDS
GTGGTCTTTCCGGAACTTGG+AGG 0.530704 4_1:-5089990 None:intergenic
TCAAGAGAAACAGAAACTGT+TGG 0.530988 4_1:+5089328 Msa0530990:CDS
GTATTTGAATCAACGTCTGC+TGG 0.531531 4_1:-5093787 None:intergenic
GAATATGTTCTCGAGGTCCT+TGG 0.532367 4_1:-5091223 None:intergenic
CAAGACCTGTTTAATGCCCT+CGG 0.532881 4_1:+5095075 Msa0530990:CDS
AAACCGGTGGTTATATTGAC+GGG 0.533091 4_1:+5093629 Msa0530990:CDS
ATGGCTATAATCCAGCAACT+TGG 0.534112 4_1:+5094535 Msa0530990:CDS
CGTTGATTCAAATACCAGAA+AGG 0.534157 4_1:+5093795 Msa0530990:CDS
GGGATCAAGCTTTCCTGACA+AGG 0.534354 4_1:-5090024 None:intergenic
CTGTGCGAACGCATAAGGTA+AGG 0.534741 4_1:-5095214 None:intergenic
AGACAGTAACATGAGGAGAA+TGG 0.535914 4_1:-5093729 None:intergenic
GGGGTTAGTAAAATCAAAGA+TGG 0.536326 4_1:+5094516 Msa0530990:CDS
AAAACCGGTGGTTATATTGA+CGG 0.536641 4_1:+5093628 Msa0530990:CDS
CTTGCTTATGGAAACAACAT+TGG 0.537542 4_1:+5094840 Msa0530990:CDS
AGTTCATAAGTCTCTGGTGC+TGG 0.538681 4_1:-5091158 None:intergenic
TTTCGAGCTATTGCAGCACT+TGG 0.540052 4_1:+5092264 Msa0530990:CDS
AGAAACAGAAACTGTTGGAT+AGG 0.541112 4_1:+5089333 Msa0530990:CDS
CCTTGGGGTCCAGAATTCAT+CGG 0.542369 4_1:+5095122 Msa0530990:CDS
TAATCCAGCAACTTGGATGT+TGG 0.542685 4_1:+5094542 Msa0530990:CDS
GACAGATGATTCCTGTCTGG+TGG 0.544883 4_1:+5096059 Msa0530990:intron
GCATTTCAATCATACCATGT+TGG 0.545145 4_1:+5091507 Msa0530990:CDS
ACCTCACAGAAGTGTATGGC+GGG 0.547238 4_1:-5094877 None:intergenic
TGACGAAGTCATGGAACTAG+TGG 0.549495 4_1:+5093945 Msa0530990:CDS
GAAGTTCTTCTACTACAGGT+TGG 0.555140 4_1:+5089132 Msa0530990:CDS
TGATGAAGAAGCTCTTAAAT+GGG 0.558210 4_1:+5089208 Msa0530990:CDS
GCAGCTTGGACGAAAACATA+AGG 0.558350 4_1:-5095702 None:intergenic
AGAATATACAACATCGTCAA+AGG 0.559514 4_1:-5093349 None:intergenic
ATAGTGCAAGTAACAGTCTC+CGG 0.559580 4_1:+5089099 Msa0530990:CDS
TACTGCTGTTCTCTTCCTTG+GGG 0.559921 4_1:+5095107 Msa0530990:CDS
TGTGTCAACCGTGTTCCTAA+CGG 0.560994 4_1:-5094142 None:intergenic
GTCAATACTTGGTTGATGAA+TGG 0.561667 4_1:-5094184 None:intergenic
AGCTCAAGGAAAGAATTGAT+AGG 0.562284 4_1:+5089399 Msa0530990:CDS
ATTAAGGCTGTGAGAACACC+AGG 0.563092 4_1:-5093553 None:intergenic
GGCAGGAAATGAAGGTTCAA+GGG 0.563441 4_1:+5093479 Msa0530990:intron
GCTTTCTCAGCAAGGTGCCA+AGG 0.563628 4_1:+5090367 Msa0530990:CDS
CTAGCATCTAATCCAGATGT+AGG 0.563717 4_1:-5094096 None:intergenic
CTGGTGGAGATGGTACTACT+GGG 0.563910 4_1:+5096075 Msa0530990:CDS
AAAGTATGGTGTTAACAAGA+AGG 0.564209 4_1:+5091602 Msa0530990:CDS
TGATTCCTGTCTGGTGGAGA+TGG 0.564319 4_1:+5096065 Msa0530990:CDS
CTCCGATTCTCCTCCCAACA+TGG 0.564428 4_1:-5091521 None:intergenic
AGTCCACTCAAATCCAATCA+TGG 0.565135 4_1:-5095748 None:intergenic
TTATACCAAATTTGAACCAA+GGG 0.565281 4_1:-5096451 None:intergenic
GATCTTTCAACTGCTACCAC+TGG 0.565678 4_1:-5095153 None:intergenic
CCAAAGAGAGAGAAGAGGAA+TGG 0.567199 4_1:+5093299 Msa0530990:CDS
TGCAAAGGACCCAAATGTGT+TGG 0.568979 4_1:-5092304 None:intergenic
AACTGTTACTCAATTTGCTG+AGG 0.569169 4_1:+5091485 Msa0530990:CDS
AATGCGAACCGTTAGGAACA+CGG 0.570551 4_1:+5094134 Msa0530990:CDS
TGTTGTTTAGAGCATTGGAG+GGG 0.570840 4_1:+5094497 Msa0530990:intron
CAATTGTAATGCGAACCGTT+AGG 0.571405 4_1:+5094127 Msa0530990:CDS
ACCACAGGAGAAATGTTGGT+TGG 0.571560 4_1:+5091005 Msa0530990:CDS
GTATGTGCTGATACTATGGT+AGG 0.571567 4_1:+5090936 Msa0530990:CDS
CCGTATAGTGTCCAAGACAC+TGG 0.571700 4_1:-5096103 None:intergenic
GATGTTCATTGACGAAGTCA+TGG 0.572110 4_1:+5093936 Msa0530990:intron
CTTACCTTATGCGTTCGCAC+AGG 0.575196 4_1:+5095215 Msa0530990:CDS
TTTATACCAAATTTGAACCA+AGG 0.575589 4_1:-5096452 None:intergenic
AATGACTGTGAGGGAAACAT+TGG 0.578214 4_1:+5090345 Msa0530990:CDS
TAGTACCATCTCCACCAGAC+AGG 0.580067 4_1:-5096070 None:intergenic
TATTGGAGAAATGACTGTGA+GGG 0.581417 4_1:+5090336 Msa0530990:CDS
AGTTACCACAGGAGAAATGT+TGG 0.583193 4_1:+5091001 Msa0530990:CDS
AAACATTGGCTTTCTCAGCA+AGG 0.583474 4_1:+5090359 Msa0530990:CDS
ATATTCTGTTGACATGCCAC+AGG 0.585160 4_1:+5093365 Msa0530990:CDS
ATGCCATGATTGGATTTGAG+TGG 0.586359 4_1:+5095745 Msa0530990:CDS
TGACACCATATGATGCAGCT+TGG 0.586978 4_1:-5095716 None:intergenic
CATAACGTGATCCGACACCT+TGG 0.588186 4_1:-5090384 None:intergenic
ATCAAAAGCTGGTGGATTTG+GGG 0.588857 4_1:+5092660 Msa0530990:CDS
AAAAGGTAATAGGAATCTTG+AGG 0.590354 4_1:-5092033 None:intergenic
GGTTTGTTGGCGACATCGCG+TGG 0.590683 4_1:+5089272 Msa0530990:CDS
TGTGGTTGTTGGGACTGCAG+TGG 0.591146 4_1:+5096246 Msa0530990:CDS
GGGCATATGCTATACCTACA+TGG 0.593573 4_1:+5092008 Msa0530990:CDS
GGTATAGCATATGCCCATGA+AGG 0.595726 4_1:-5092001 None:intergenic
TCAGCAAGGTGCCAAGGTGT+CGG 0.600089 4_1:+5090373 Msa0530990:CDS
CATGGTTCCAACTATCTCCA+AGG 0.600968 4_1:-5092737 None:intergenic
ATAATGGTGAATGAATTCCT+TGG 0.602110 4_1:+5092720 Msa0530990:CDS
TCCTAAAGTAAGTTCTTGTG+CGG 0.602375 4_1:-5094577 None:intergenic
ATACAGAGGATATCAAAAGC+TGG 0.603572 4_1:+5092649 Msa0530990:intron
GCTCCCGTCAATATAACCAC+CGG 0.604161 4_1:-5093632 None:intergenic
TCTATAGAGAAAGAGCTGCT+GGG 0.606112 4_1:+5095181 Msa0530990:CDS
TTCAATCATACCATGTTGGG+AGG 0.607208 4_1:+5091511 Msa0530990:CDS
CCAAATTCAAGTAAAACACT+AGG 0.607704 4_1:+5092853 Msa0530990:CDS
TCATGAAGACATCAACATCT+GGG 0.607765 4_1:-5090646 None:intergenic
GGAGGAGAAGAAATATATGT+TGG 0.607944 4_1:+5094335 Msa0530990:CDS
TAGTGTCCAAGACACTGGAC+AGG 0.609518 4_1:-5096098 None:intergenic
CAGCAACGATTGAAGCGACA+TGG 0.610232 4_1:-5095866 None:intergenic
TGCATGAATATAGATACAAA+TGG 0.611753 4_1:-5096405 None:intergenic
CAAAGAAAGAGAGTTACCAC+AGG 0.611820 4_1:+5090990 Msa0530990:CDS
TTGGAGAAACGTTACAATGG+AGG 0.612835 4_1:+5089151 Msa0530990:CDS
GATTCTTCACAGAAGCACAT+TGG 0.616003 4_1:+5092899 Msa0530990:CDS
ACAGCCTTAATGGGAGTCAG+TGG 0.617068 4_1:+5093565 Msa0530990:CDS
TCAGTGGCACTTACAGGTCG+CGG 0.617206 4_1:-5095933 None:intergenic
AAAGCTTGATCCCAATCTCA+AGG 0.619489 4_1:+5090034 Msa0530990:CDS
AAATGAAGATCATTTGAACC+AGG 0.622701 4_1:-5094776 None:intergenic
CCGATGAATTCTGGACCCCA+AGG 0.625829 4_1:-5095122 None:intergenic
CACCGCGATTCCTTGAATGG+TGG 0.627920 4_1:+5091854 Msa0530990:CDS
TCATCCATGAAAATTATGGA+TGG 0.628241 4_1:-5094072 None:intergenic
CCTAGCCAAAGAGAGAGAAG+AGG 0.630150 4_1:+5093294 Msa0530990:CDS
AGAGTGACTTATAATGGACA+TGG 0.632049 4_1:+5090256 Msa0530990:CDS
GTTAGGAACACGGTTGACAC+AGG 0.634502 4_1:+5094144 Msa0530990:CDS
CAGAGGATATCAAAAGCTGG+TGG 0.635488 4_1:+5092652 Msa0530990:intron
ATATGAGCACCTAAATGTTG+AGG 0.636029 4_1:+5089702 Msa0530990:CDS
TGTTGAGTTGCAGCAATGGA+AGG 0.637750 4_1:+5089065 None:intergenic
AGTCCTTCAACTTCCAAAGA+CGG 0.639830 4_1:+5096299 Msa0530990:CDS
CAGTTATTCCTCATGAAACG+CGG 0.639848 4_1:+5094314 Msa0530990:intron
TGTTATGCAGCAAGTTCAGG+AGG 0.641379 4_1:+5093252 Msa0530990:intron
TATCTTGAAGATGTAAACAA+AGG 0.641917 4_1:-5091676 None:intergenic
GTGGAATAGTCAAACCTCGT+AGG 0.644426 4_1:+5089949 Msa0530990:CDS
CTCAGTTACTAATACAGTCG+AGG 0.645771 4_1:+5089768 Msa0530990:CDS
GAAACTAGGAAGCTTCGCAA+TGG 0.646486 4_1:-5091951 None:intergenic
AATTCAAGAATATGTTCTCG+AGG 0.648022 4_1:-5091230 None:intergenic
TTCAAATGTCCTGAGAGGAA+AGG 0.648456 4_1:+5091269 Msa0530990:CDS
TTTCAACCGAACAACGCAAG+AGG 0.648569 4_1:+5094019 Msa0530990:CDS
ATGTTGCGTGGTATCTCCGG+AGG 0.652145 4_1:+5090966 Msa0530990:CDS
TTGGTTTCAAATGTCCTGAG+AGG 0.652689 4_1:+5091264 Msa0530990:CDS
AGGAGGATCTTATAATGGTG+CGG 0.653807 4_1:+5093269 Msa0530990:CDS
GATTTGATCCTGATGTTACG+AGG 0.655210 4_1:+5092098 Msa0530990:CDS
GTTGAAAGACCATTCACACC+AGG 0.655703 4_1:-5094003 None:intergenic
TCCAACCAACATTTCTCCTG+TGG 0.656741 4_1:-5091006 None:intergenic
GGAATCTTGAGGATCCATGT+AGG 0.657745 4_1:-5092022 None:intergenic
AAGAAGTGTGAGAAGTGCAA+AGG 0.660322 4_1:-5092319 None:intergenic
AACCTCACAGAAGTGTATGG+CGG 0.661399 4_1:-5094878 None:intergenic
ACTTGGTAGAAACATGATTG+TGG 0.665149 4_1:+5092281 Msa0530990:CDS
CTCCACCATTCAAGGAATCG+CGG 0.665499 4_1:-5091856 None:intergenic
AGCAGTATACATCGAACCGA+GGG 0.670120 4_1:-5095091 None:intergenic
TGACAAGGCCAAAAGAAGTG+TGG 0.670517 4_1:-5090009 None:intergenic
AAATGATTGCGAGTATTGGG+CGG 0.670938 4_1:-5094801 None:intergenic
AGGTTGGAGAAACGTTACAA+TGG 0.672932 4_1:+5089148 Msa0530990:CDS
GCAGGAAATGAAGGTTCAAG+GGG 0.674874 4_1:+5093480 Msa0530990:intron
AGATGTTGATGTCTTCATGA+AGG 0.679322 4_1:+5090649 Msa0530990:CDS
TCGTCAAAGGCTATAGAATG+CGG 0.680770 4_1:-5093336 None:intergenic
TTCATCGGCTGTACAACCAG+TGG 0.680995 4_1:+5095137 Msa0530990:CDS
ATATATGCAGCAGTTCTCTG+AGG 0.682688 4_1:-5090295 None:intergenic
TATGTGCTGATACTATGGTA+GGG 0.682764 4_1:+5090937 Msa0530990:CDS
GACTCATAGACAGTAACATG+AGG 0.689699 4_1:-5093736 None:intergenic
GATGGTGAAATTGTCTACCA+AGG 0.691952 4_1:+5091206 Msa0530990:CDS
TTTCAACATATTATTCACTG+TGG 0.695837 4_1:+5092963 Msa0530990:CDS
ATACAGGCAATGGCAACTGG+AGG 0.699423 4_1:+5090768 Msa0530990:intron
CAGCAGTATACATCGAACCG+AGG 0.707321 4_1:-5095092 None:intergenic
ACCCGCCATACACTTCTGTG+AGG 0.707850 4_1:+5094876 Msa0530990:CDS
ATATTGGAGAAATGACTGTG+AGG 0.712009 4_1:+5090335 Msa0530990:CDS
TTATTCCTCATGAAACGCGG+AGG 0.715991 4_1:+5094317 Msa0530990:CDS
AGAAGCAGTGTCATCCTACG+AGG 0.718146 4_1:-5089963 None:intergenic
TGACTAGAATGACGACCCAG+TGG 0.725066 4_1:-5094359 None:intergenic
GTAGGGAATGAAATGTTGCG+TGG 0.735069 4_1:+5090954 Msa0530990:CDS
TCATTGCAATTGTTGCCATG+AGG 0.750927 4_1:-5091808 None:intergenic
AAAGATAGATCACCTATACG+CGG 0.753227 4_1:-5093166 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCAAAATTTTCAAAAATAT+AGG - chr4_1:5089480-5089499 None:intergenic 10.0%
!! ATAATTAGATAGAAAAAAAA+AGG - chr4_1:5090436-5090455 None:intergenic 10.0%
!! AATTAATGAAATTAATTCTA+AGG + chr4_1:5090711-5090730 Msa0530990:intron 10.0%
!!! TTTTTTAATTCTTTTAGAGT+TGG + chr4_1:5089652-5089671 Msa0530990:intron 15.0%
!!! TTTTTAATTCTTTTAGAGTT+GGG + chr4_1:5089653-5089672 Msa0530990:intron 15.0%
!! AGCAAATTTATTTGAAAATA+TGG + chr4_1:5094644-5094663 Msa0530990:intron 15.0%
!! ATTTAAGTACAAATGAAAAA+TGG - chr4_1:5096379-5096398 None:intergenic 15.0%
!!! ATTTTTCATTTGTACTTAAA+TGG + chr4_1:5096378-5096397 Msa0530990:three_prime_UTR 15.0%
!!! TCTCATAACTTTTTTTTCTT+TGG + chr4_1:5089851-5089870 Msa0530990:intron 20.0%
!!! ACGGTTTTTTTTTTTTCTAT+CGG - chr4_1:5090501-5090520 None:intergenic 20.0%
!!! TTAATACATTCTATTGACTT+TGG + chr4_1:5090743-5090762 Msa0530990:intron 20.0%
!!! TTCAAAATTATGTAGCTTTT+GGG + chr4_1:5090906-5090925 Msa0530990:intron 20.0%
!! GTAGTTATGATTATGTTTAA+TGG + chr4_1:5091908-5091927 Msa0530990:CDS 20.0%
!! TATGATTATGTTTAATGGAA+TGG + chr4_1:5091913-5091932 Msa0530990:CDS 20.0%
!! ATAACTATCGTATATATGAT+TGG - chr4_1:5092471-5092490 None:intergenic 20.0%
!! ATCGTACAATTATAATTGAT+TGG + chr4_1:5092516-5092535 Msa0530990:intron 20.0%
!! AATGTTTCTTTCAATTTCAT+TGG + chr4_1:5092613-5092632 Msa0530990:intron 20.0%
!! GAAATTATATTATGATACAG+AGG + chr4_1:5092635-5092654 Msa0530990:intron 20.0%
!!! ACTGTTATTTAAGTTTCTTA+TGG + chr4_1:5093020-5093039 Msa0530990:intron 20.0%
!!! GTTAGTTACAATTTAAGATT+TGG + chr4_1:5093403-5093422 Msa0530990:intron 20.0%
!!! AACAATGTTTCTAGTTAATT+TGG + chr4_1:5093432-5093451 Msa0530990:intron 20.0%
!! ATTTGATTGATTGAGATATT+TGG + chr4_1:5093860-5093879 Msa0530990:intron 20.0%
!!! TAATTGTTTTCTATTGAACT+AGG - chr4_1:5095351-5095370 None:intergenic 20.0%
!! GTGATTTATTAATATCCATT+AGG - chr4_1:5095584-5095603 None:intergenic 20.0%
!!! GAATTCATAAGAAGTTATTT+TGG + chr4_1:5096190-5096209 Msa0530990:CDS 20.0%
! ATCTGTTATATCAATCTCAT+TGG - chr4_1:5089300-5089319 None:intergenic 25.0%
!! ATACTGAAACATTGTTTTCA+TGG + chr4_1:5089532-5089551 Msa0530990:intron 25.0%
!!! AAAATCGATCAGTTTTTAAG+TGG - chr4_1:5089616-5089635 None:intergenic 25.0%
! TCATATCTAACTTCAATTGT+TGG - chr4_1:5089688-5089707 None:intergenic 25.0%
! AACTTGACCTTATAATCTTA+AGG + chr4_1:5090133-5090152 Msa0530990:intron 25.0%
! ACTTGACCTTATAATCTTAA+GGG + chr4_1:5090134-5090153 Msa0530990:intron 25.0%
! ATTTAAATATTGTACTCGAG+GGG - chr4_1:5090173-5090192 None:intergenic 25.0%
! CATTTAAATATTGTACTCGA+GGG - chr4_1:5090174-5090193 None:intergenic 25.0%
! TCATTTAAATATTGTACTCG+AGG - chr4_1:5090175-5090194 None:intergenic 25.0%
!!! CGGTTTTTTTTTTTTCTATC+GGG - chr4_1:5090500-5090519 None:intergenic 25.0%
!! CTTCAAAATTATGTAGCTTT+TGG + chr4_1:5090905-5090924 Msa0530990:intron 25.0%
! CAATATGTTCACATTCTAAA+TGG + chr4_1:5091110-5091129 Msa0530990:CDS 25.0%
! GACATTATTCTTATATCTGA+TGG + chr4_1:5091188-5091207 Msa0530990:CDS 25.0%
!!! CTTGAATTTTTTGAATCAGT+TGG + chr4_1:5091245-5091264 Msa0530990:CDS 25.0%
!!! AGTCCATTATTTCAAGTTTT+TGG + chr4_1:5091336-5091355 Msa0530990:intron 25.0%
! TCACCAAAAACTTGAAATAA+TGG - chr4_1:5091342-5091361 None:intergenic 25.0%
!!! TTATTTCAAGTTTTTGGTGA+AGG + chr4_1:5091342-5091361 Msa0530990:intron 25.0%
! GCATTAACAACTAAAAAGTA+TGG + chr4_1:5091588-5091607 Msa0530990:CDS 25.0%
! TATCTTGAAGATGTAAACAA+AGG - chr4_1:5091679-5091698 None:intergenic 25.0%
! ATCAAATCCTATTACGTAAT+AGG - chr4_1:5092086-5092105 None:intergenic 25.0%
!!! TTTTCTTGTAGTGTTACTTA+TGG + chr4_1:5092162-5092181 Msa0530990:intron 25.0%
!! AAATCCATTTTATCATACAG+TGG + chr4_1:5092579-5092598 Msa0530990:intron 25.0%
! CACAAGTTTAAGAAATTACA+TGG - chr4_1:5092758-5092777 None:intergenic 25.0%
! TTTCAACATATTATTCACTG+TGG + chr4_1:5092963-5092982 Msa0530990:CDS 25.0%
! TTAACTCTTGAGATTCTAAT+TGG + chr4_1:5093458-5093477 Msa0530990:intron 25.0%
!! GATAGATTAGTACTTTTGAA+GGG + chr4_1:5093511-5093530 Msa0530990:CDS 25.0%
!!! AACTACTTTAATGGATGTTT+TGG + chr4_1:5093597-5093616 Msa0530990:CDS 25.0%
!! ATACTGTTTGTTCATACTTT+TGG + chr4_1:5093895-5093914 Msa0530990:intron 25.0%
!! ATACTTTTGGATCTGATAAA+TGG + chr4_1:5093908-5093927 Msa0530990:intron 25.0%
!! TCAATTGATCAAGTATTTTG+AGG + chr4_1:5094379-5094398 Msa0530990:CDS 25.0%
!! TTTTCCAATATGATCATTGT+TGG - chr4_1:5094687-5094706 None:intergenic 25.0%
! AACAATAGTTTATAACAGTG+AGG - chr4_1:5094713-5094732 None:intergenic 25.0%
! ACTGTTATAAACTATTGTTC+AGG + chr4_1:5094714-5094733 Msa0530990:intron 25.0%
! AAGCAACTTATAGAAGAATT+AGG + chr4_1:5094743-5094762 Msa0530990:CDS 25.0%
! TAAAAATGATTGCGAGTATT+GGG - chr4_1:5094807-5094826 None:intergenic 25.0%
!! TTTTTCTTCACTGTTTTCAT+AGG + chr4_1:5094899-5094918 Msa0530990:CDS 25.0%
! TTGAGAGATGTAATCTAAAT+AGG + chr4_1:5095288-5095307 Msa0530990:intron 25.0%
! TCAATATATCAACAGTACTA+TGG + chr4_1:5095617-5095636 Msa0530990:intron 25.0%
! TGCATGAATATAGATACAAA+TGG - chr4_1:5096408-5096427 None:intergenic 25.0%
! TTATACCAAATTTGAACCAA+GGG - chr4_1:5096454-5096473 None:intergenic 25.0%
! TTTATACCAAATTTGAACCA+AGG - chr4_1:5096455-5096474 None:intergenic 25.0%
AAGAACTTCTCATACTAAAC+CGG - chr4_1:5089121-5089140 None:intergenic 30.0%
ATGATGAAGAAGCTCTTAAA+TGG + chr4_1:5089207-5089226 Msa0530990:CDS 30.0%
TGATGAAGAAGCTCTTAAAT+GGG + chr4_1:5089208-5089227 Msa0530990:CDS 30.0%
GAGATTGATATAACAGATCT+TGG + chr4_1:5089302-5089321 Msa0530990:CDS 30.0%
TTGATTAATGTTGCTGAAGA+GGG + chr4_1:5089356-5089375 Msa0530990:CDS 30.0%
ACTATCCTTAAAGATGTAAG+TGG + chr4_1:5089930-5089949 Msa0530990:CDS 30.0%
CTATTCCACTTACATCTTTA+AGG - chr4_1:5089938-5089957 None:intergenic 30.0%
! TTTCTTTTCACCTTGAGATT+GGG - chr4_1:5090047-5090066 None:intergenic 30.0%
! ATTTCTTTTCACCTTGAGAT+TGG - chr4_1:5090048-5090067 None:intergenic 30.0%
CTTTGTCCCTTAAGATTATA+AGG - chr4_1:5090143-5090162 None:intergenic 30.0%
AGTCAACATGATGTTCATAT+TGG + chr4_1:5090319-5090338 Msa0530990:CDS 30.0%
! GAAAAAAAAAGGCACAAACT+CGG - chr4_1:5090425-5090444 None:intergenic 30.0%
!! TCTATTGACTTTGGATATAC+AGG + chr4_1:5090752-5090771 Msa0530990:intron 30.0%
AGCAACTGATTATGTACTAA+AGG + chr4_1:5090806-5090825 Msa0530990:CDS 30.0%
ATCTATGCAATATAGTCACA+AGG + chr4_1:5090854-5090873 Msa0530990:intron 30.0%
!!! AATTATGTAGCTTTTGGGAT+TGG + chr4_1:5090911-5090930 Msa0530990:intron 30.0%
TTCATGGATGAAATATCTAC+TGG + chr4_1:5091044-5091063 Msa0530990:CDS 30.0%
AATTCAAGAATATGTTCTCG+AGG - chr4_1:5091233-5091252 None:intergenic 30.0%
CTGCAAGAAGAAATAGATTA+AGG - chr4_1:5091403-5091422 None:intergenic 30.0%
! CTTAATCTATTTCTTCTTGC+AGG + chr4_1:5091401-5091420 Msa0530990:intron 30.0%
CATTTCAATCATACCATGTT+GGG + chr4_1:5091508-5091527 Msa0530990:CDS 30.0%
TGACTCTTAGATTTGTCAAA+TGG - chr4_1:5091561-5091580 None:intergenic 30.0%
!!! TTTTTAGTTGTTAATGCTGC+TGG - chr4_1:5091585-5091604 None:intergenic 30.0%
! AAAGTATGGTGTTAACAAGA+AGG + chr4_1:5091602-5091621 Msa0530990:CDS 30.0%
TAACAAGAAGGAACTGTTAA+AGG + chr4_1:5091614-5091633 Msa0530990:CDS 30.0%
TTACATCTTCAAGATATGTC+AGG + chr4_1:5091683-5091702 Msa0530990:CDS 30.0%
AAAAGGTAATAGGAATCTTG+AGG - chr4_1:5092036-5092055 None:intergenic 30.0%
! CAAGATTCCTATTACCTTTT+TGG + chr4_1:5092036-5092055 Msa0530990:CDS 30.0%
TTTCTCACCTATTACGTAAT+AGG + chr4_1:5092076-5092095 Msa0530990:CDS 30.0%
!! TGAGGTATTGTTATTTATGC+AGG + chr4_1:5092187-5092206 Msa0530990:intron 30.0%
GCTATTACTGATAAACCAAA+TGG + chr4_1:5092230-5092249 Msa0530990:CDS 30.0%
CTGAAATAAGCTTGTAACTT+CGG - chr4_1:5092387-5092406 None:intergenic 30.0%
AGTTCCACTGTATGATAAAA+TGG - chr4_1:5092586-5092605 None:intergenic 30.0%
GTATGGACAAAATGCTATAA+TGG + chr4_1:5092704-5092723 Msa0530990:CDS 30.0%
ATAATGGTGAATGAATTCCT+TGG + chr4_1:5092720-5092739 Msa0530990:CDS 30.0%
! CCTAGTGTTTTACTTGAATT+TGG - chr4_1:5092856-5092875 None:intergenic 30.0%
CCAAATTCAAGTAAAACACT+AGG + chr4_1:5092853-5092872 Msa0530990:CDS 30.0%
!! AACACTAGGAATTCAAGTTT+TGG + chr4_1:5092867-5092886 Msa0530990:CDS 30.0%
! TCTTCATTTATTGTTGCTTG+TGG - chr4_1:5093100-5093119 None:intergenic 30.0%
! TTATATTGAGTTTTCACGAG+TGG - chr4_1:5093198-5093217 None:intergenic 30.0%
AGAATATACAACATCGTCAA+AGG - chr4_1:5093352-5093371 None:intergenic 30.0%
! CTTTTATAATCACTTACCTG+TGG - chr4_1:5093384-5093403 None:intergenic 30.0%
! GGATAGATTAGTACTTTTGA+AGG + chr4_1:5093510-5093529 Msa0530990:CDS 30.0%
AGCTGGTAAAACTACTTTAA+TGG + chr4_1:5093588-5093607 Msa0530990:CDS 30.0%
!!! CAAACGTTTCTTGCTTTTTA+GGG - chr4_1:5093675-5093694 None:intergenic 30.0%
! GCTTTAAATACTAACCTTTC+TGG - chr4_1:5093812-5093831 None:intergenic 30.0%
TGATTGAGATATTTGGCATT+TGG + chr4_1:5093867-5093886 Msa0530990:intron 30.0%
AACTATTGCAGTTGAATTAG+TGG + chr4_1:5094044-5094063 Msa0530990:CDS 30.0%
! TGAGGTAAGAAATGATTTGT+TGG + chr4_1:5094224-5094243 Msa0530990:intron 30.0%
!! TGTTATTTCGAGTCAAAAAG+AGG - chr4_1:5094274-5094293 None:intergenic 30.0%
!!! TTGATCAAGTATTTTGAGGT+TGG + chr4_1:5094383-5094402 Msa0530990:intron 30.0%
TGGATAACTATAATTCCACT+TGG + chr4_1:5094455-5094474 Msa0530990:intron 30.0%
!! TTTTCTGTTGTTTAGAGCAT+TGG + chr4_1:5094492-5094511 Msa0530990:intron 30.0%
ACAAAAATTCTGAGTTGTAC+AGG + chr4_1:5094619-5094638 Msa0530990:CDS 30.0%
AGTACCAACAATGATCATAT+TGG + chr4_1:5094680-5094699 Msa0530990:intron 30.0%
AAATGAAGATCATTTGAACC+AGG - chr4_1:5094779-5094798 None:intergenic 30.0%
CTAAAAATGATTGCGAGTAT+TGG - chr4_1:5094808-5094827 None:intergenic 30.0%
!!! ATCATTTTTAGTCCAATGCT+TGG + chr4_1:5094817-5094836 Msa0530990:CDS 30.0%
AGAATATTGTTCCAAACATC+AGG - chr4_1:5094925-5094944 None:intergenic 30.0%
! TGATGTTTGGAACAATATTC+TGG + chr4_1:5094924-5094943 Msa0530990:CDS 30.0%
! GATGTTTGGAACAATATTCT+GGG + chr4_1:5094925-5094944 Msa0530990:CDS 30.0%
AAAGAGGTTAGAATTCAAGT+TGG - chr4_1:5095032-5095051 None:intergenic 30.0%
TGTGATGATCCTTATTAGAA+CGG + chr4_1:5095321-5095340 Msa0530990:intron 30.0%
TGTTTAAATAATACCGTACC+TGG + chr4_1:5095499-5095518 Msa0530990:intron 30.0%
GTTTAAATAATACCGTACCT+GGG + chr4_1:5095500-5095519 Msa0530990:intron 30.0%
TTTAAATAATACCGTACCTG+GGG + chr4_1:5095501-5095520 Msa0530990:intron 30.0%
AGTCATTACAACAATCCTAA+TGG + chr4_1:5095566-5095585 Msa0530990:intron 30.0%
!!! GCAATTTGGAATCTTTTTTC+AGG + chr4_1:5095900-5095919 Msa0530990:CDS 30.0%
TCAATGTGTTTAAAGATCAG+TGG - chr4_1:5095952-5095971 None:intergenic 30.0%
TGGAGATATAACCAAAATCA+TGG + chr4_1:5096144-5096163 Msa0530990:CDS 30.0%
! ATTCTCTGATTCCATGATTT+TGG - chr4_1:5096158-5096177 None:intergenic 30.0%
AAAATGGAAAGAAGTGAAGA+TGG - chr4_1:5096363-5096382 None:intergenic 30.0%
ATGAGAAGTTCTTCTACTAC+AGG + chr4_1:5089128-5089147 Msa0530990:CDS 35.0%
TCCTCAAACGGTTATAAGTA+GGG - chr4_1:5089250-5089269 None:intergenic 35.0%
TTCCTCAAACGGTTATAAGT+AGG - chr4_1:5089251-5089270 None:intergenic 35.0%
ACTTATAACCGTTTGAGGAA+AGG + chr4_1:5089251-5089270 Msa0530990:CDS 35.0%
TCAAGAGAAACAGAAACTGT+TGG + chr4_1:5089328-5089347 Msa0530990:CDS 35.0%
AGAAACAGAAACTGTTGGAT+AGG + chr4_1:5089333-5089352 Msa0530990:CDS 35.0%
GTTGATTAATGTTGCTGAAG+AGG + chr4_1:5089355-5089374 Msa0530990:CDS 35.0%
! GAAGTTTTTGTTGAAGCTCA+AGG + chr4_1:5089385-5089404 Msa0530990:CDS 35.0%
AGCTCAAGGAAAGAATTGAT+AGG + chr4_1:5089399-5089418 Msa0530990:CDS 35.0%
ATATGAGCACCTAAATGTTG+AGG + chr4_1:5089702-5089721 Msa0530990:CDS 35.0%
GTAACTGAGTTCAACAAAGT+TGG - chr4_1:5089757-5089776 None:intergenic 35.0%
ACAACTGAGAAAGTAGAATC+TGG - chr4_1:5089803-5089822 None:intergenic 35.0%
TCTTTCTGCTTGTGAGAATA+TGG - chr4_1:5089902-5089921 None:intergenic 35.0%
!! AGAGTGACTTATAATGGACA+TGG + chr4_1:5090256-5090275 Msa0530990:CDS 35.0%
!! GACTTATAATGGACATGGAA+TGG + chr4_1:5090261-5090280 Msa0530990:CDS 35.0%
ATATTGGAGAAATGACTGTG+AGG + chr4_1:5090335-5090354 Msa0530990:CDS 35.0%
TATTGGAGAAATGACTGTGA+GGG + chr4_1:5090336-5090355 Msa0530990:CDS 35.0%
TTTGTGATCCATAGACTTGT+TGG + chr4_1:5090580-5090599 Msa0530990:intron 35.0%
TCATGAAGACATCAACATCT+GGG - chr4_1:5090649-5090668 None:intergenic 35.0%
TTCATGAAGACATCAACATC+TGG - chr4_1:5090650-5090669 None:intergenic 35.0%
AGATGTTGATGTCTTCATGA+AGG + chr4_1:5090649-5090668 Msa0530990:CDS 35.0%
! CAAGGTATTTAGAGTCTATC+AGG + chr4_1:5090872-5090891 Msa0530990:intron 35.0%
! TATGTGCTGATACTATGGTA+GGG + chr4_1:5090937-5090956 Msa0530990:CDS 35.0%
TCTCACAATTTGGAAAGTTG+TGG - chr4_1:5091081-5091100 None:intergenic 35.0%
TCGAAAAGTTCATAAGTCTC+TGG - chr4_1:5091167-5091186 None:intergenic 35.0%
TAGACAGAGAAAAACCATAC+AGG + chr4_1:5091457-5091476 Msa0530990:CDS 35.0%
GTAACAGTTACAAACCTGTA+TGG - chr4_1:5091474-5091493 None:intergenic 35.0%
!! AACTGTTACTCAATTTGCTG+AGG + chr4_1:5091485-5091504 Msa0530990:CDS 35.0%
GCATTTCAATCATACCATGT+TGG + chr4_1:5091507-5091526 Msa0530990:CDS 35.0%
GAGGAGAAGCTAAAAAACAT+AGG - chr4_1:5091792-5091811 None:intergenic 35.0%
!!! TGTTTTTTAGCTTCTCCTCA+TGG + chr4_1:5091793-5091812 Msa0530990:intron 35.0%
TCTCTTTGCTTGTAGAAACT+AGG - chr4_1:5091968-5091987 None:intergenic 35.0%
!!! ACCTTCTGTTTTTTCCTTCA+TGG + chr4_1:5091987-5092006 Msa0530990:CDS 35.0%
!!! CCTTCTGTTTTTTCCTTCAT+GGG + chr4_1:5091988-5092007 Msa0530990:CDS 35.0%
GCAACTTCCAAAAAGGTAAT+AGG - chr4_1:5092046-5092065 None:intergenic 35.0%
ATGCTGCAAATAGAAAAGGA+AGG - chr4_1:5092131-5092150 None:intergenic 35.0%
AGACATGCTGCAAATAGAAA+AGG - chr4_1:5092135-5092154 None:intergenic 35.0%
GAAATAATCCAGAAGCCATT+TGG - chr4_1:5092248-5092267 None:intergenic 35.0%
ACTTGGTAGAAACATGATTG+TGG + chr4_1:5092281-5092300 Msa0530990:CDS 35.0%
CTTCTCACACTTCTTACATT+AGG + chr4_1:5092327-5092346 Msa0530990:CDS 35.0%
ATACAGAGGATATCAAAAGC+TGG + chr4_1:5092649-5092668 Msa0530990:intron 35.0%
!! ATATCAAAAGCTGGTGGATT+TGG + chr4_1:5092658-5092677 Msa0530990:CDS 35.0%
!! TATCAAAAGCTGGTGGATTT+GGG + chr4_1:5092659-5092678 Msa0530990:CDS 35.0%
TGGATTTCACCTATGATGTA+TGG + chr4_1:5092687-5092706 Msa0530990:CDS 35.0%
! GCATTTTGTCCATACATCAT+AGG - chr4_1:5092699-5092718 None:intergenic 35.0%
ATGAATTCCTTGGAGATAGT+TGG + chr4_1:5092730-5092749 Msa0530990:CDS 35.0%
TACGTATAGTAGAAACTTGC+AGG + chr4_1:5092793-5092812 Msa0530990:intron 35.0%
AATCGAAAAGCGAATGAGTT+AGG - chr4_1:5092819-5092838 None:intergenic 35.0%
! AAGCACATTGGTATTGGATA+GGG + chr4_1:5092911-5092930 Msa0530990:CDS 35.0%
AAAGATAGATCACCTATACG+CGG - chr4_1:5093169-5093188 None:intergenic 35.0%
AATTGTTATGCAGCAAGTTC+AGG + chr4_1:5093249-5093268 Msa0530990:intron 35.0%
AGTTCAGGAGGATCTTATAA+TGG + chr4_1:5093264-5093283 Msa0530990:CDS 35.0%
TTCTAATTGGCAGGAAATGA+AGG + chr4_1:5093471-5093490 Msa0530990:intron 35.0%
!!! ACTTTAATGGATGTTTTGGC+TGG + chr4_1:5093601-5093620 Msa0530990:CDS 35.0%
AAAACCGGTGGTTATATTGA+CGG + chr4_1:5093628-5093647 Msa0530990:CDS 35.0%
!!! GCAAACGTTTCTTGCTTTTT+AGG - chr4_1:5093676-5093695 None:intergenic 35.0%
ATCATTCTGCTCACAATAAC+CGG - chr4_1:5093707-5093726 None:intergenic 35.0%
TGTTACTGTCTATGAGTCAT+TGG + chr4_1:5093741-5093760 Msa0530990:CDS 35.0%
!! CGTTGATTCAAATACCAGAA+AGG + chr4_1:5093795-5093814 Msa0530990:CDS 35.0%
CAATCCATTGAGAAACTCTT+TGG + chr4_1:5093972-5093991 Msa0530990:CDS 35.0%
!! GTCAATACTTGGTTGATGAA+TGG - chr4_1:5094187-5094206 None:intergenic 35.0%
GCTTCGAATATGTCAATACT+TGG - chr4_1:5094198-5094217 None:intergenic 35.0%
! CATATTCGAAGCTTTTGATG+AGG + chr4_1:5094206-5094225 Msa0530990:CDS 35.0%
GGAGGAGAAGAAATATATGT+TGG + chr4_1:5094335-5094354 Msa0530990:CDS 35.0%
AGAAATATATGTTGGACCAC+TGG + chr4_1:5094343-5094362 Msa0530990:CDS 35.0%
GAAATATATGTTGGACCACT+GGG + chr4_1:5094344-5094363 Msa0530990:CDS 35.0%
ATATTAGATGAGCTTCCAAG+TGG - chr4_1:5094473-5094492 None:intergenic 35.0%
! GGGGTTAGTAAAATCAAAGA+TGG + chr4_1:5094516-5094535 Msa0530990:CDS 35.0%
TCCTAAAGTAAGTTCTTGTG+CGG - chr4_1:5094580-5094599 None:intergenic 35.0%
CTTGCTTATGGAAACAACAT+TGG + chr4_1:5094840-5094859 Msa0530990:CDS 35.0%
GGAAACAACATTGGTCATAT+TGG + chr4_1:5094849-5094868 Msa0530990:CDS 35.0%
! AAAAACCTCACAGAAGTGTA+TGG - chr4_1:5094884-5094903 None:intergenic 35.0%
TCACTTACTATTTCCTTCCA+AGG - chr4_1:5094952-5094971 None:intergenic 35.0%
GTTCTAATAAGGATCATCAC+AGG - chr4_1:5095322-5095341 None:intergenic 35.0%
TTAAATAATACCGTACCTGG+GGG + chr4_1:5095502-5095521 Msa0530990:intron 35.0%
CTCGTAGTTTACTGATAAGT+GGG - chr4_1:5095548-5095567 None:intergenic 35.0%
ACTCGTAGTTTACTGATAAG+TGG - chr4_1:5095549-5095568 None:intergenic 35.0%
GTCATAGTTTATGCCATGAT+TGG + chr4_1:5095735-5095754 Msa0530990:CDS 35.0%
! TTATGCTACTTCACCTTCTA+TGG + chr4_1:5095813-5095832 Msa0530990:CDS 35.0%
TGGAAAAAATCCACCAAACT+TGG - chr4_1:5096343-5096362 None:intergenic 35.0%
AAGTTCCCTTGGTTCAAATT+TGG + chr4_1:5096446-5096465 Msa0530990:three_prime_UTR 35.0%
ATAGTGCAAGTAACAGTCTC+CGG + chr4_1:5089099-5089118 Msa0530990:CDS 40.0%
GAAGTTCTTCTACTACAGGT+TGG + chr4_1:5089132-5089151 Msa0530990:CDS 40.0%
AGGTTGGAGAAACGTTACAA+TGG + chr4_1:5089148-5089167 Msa0530990:CDS 40.0%
TTGGAGAAACGTTACAATGG+AGG + chr4_1:5089151-5089170 Msa0530990:CDS 40.0%
TCCCTACTTATAACCGTTTG+AGG + chr4_1:5089246-5089265 Msa0530990:CDS 40.0%
CCAACAAACCTTTCCTCAAA+CGG - chr4_1:5089262-5089281 None:intergenic 40.0%
AAGCTTCTGCCTCAACATTT+AGG - chr4_1:5089714-5089733 None:intergenic 40.0%
CTCAGTTACTAATACAGTCG+AGG + chr4_1:5089768-5089787 Msa0530990:CDS 40.0%
! CAAAAGAAGTGTGGTCTTTC+CGG - chr4_1:5090003-5090022 None:intergenic 40.0%
AAAGCTTGATCCCAATCTCA+AGG + chr4_1:5090034-5090053 Msa0530990:CDS 40.0%
GTTCTCTTTCACTGTTCAAG+AGG + chr4_1:5090092-5090111 Msa0530990:intron 40.0%
TCTGGGAGAGTGACTTATAA+TGG + chr4_1:5090250-5090269 Msa0530990:CDS 40.0%
ATATATGCAGCAGTTCTCTG+AGG - chr4_1:5090298-5090317 None:intergenic 40.0%
AATGACTGTGAGGGAAACAT+TGG + chr4_1:5090345-5090364 Msa0530990:CDS 40.0%
!! AAACATTGGCTTTCTCAGCA+AGG + chr4_1:5090359-5090378 Msa0530990:CDS 40.0%
!! GTGTGGTTTTTCAGAAACGA+GGG - chr4_1:5090459-5090478 None:intergenic 40.0%
TCTGAAAAACCACACGTGTT+CGG + chr4_1:5090464-5090483 Msa0530990:intron 40.0%
GCGTCGTTCAAACAAAAACA+CGG - chr4_1:5090520-5090539 None:intergenic 40.0%
TGAGCTGTCTAGAAGAGAAA+AGG + chr4_1:5090604-5090623 Msa0530990:CDS 40.0%
GACTTTGGATATACAGGCAA+TGG + chr4_1:5090758-5090777 Msa0530990:intron 40.0%
! GGATGTATGTGCTGATACTA+TGG + chr4_1:5090932-5090951 Msa0530990:CDS 40.0%
! GTATGTGCTGATACTATGGT+AGG + chr4_1:5090936-5090955 Msa0530990:CDS 40.0%
AACTCTCTTTCTTTGTCCTC+CGG - chr4_1:5090985-5091004 None:intergenic 40.0%
CAAAGAAAGAGAGTTACCAC+AGG + chr4_1:5090990-5091009 Msa0530990:CDS 40.0%
AGTTACCACAGGAGAAATGT+TGG + chr4_1:5091001-5091020 Msa0530990:CDS 40.0%
ACCAGCAAATGCTCTATTCA+TGG + chr4_1:5091028-5091047 Msa0530990:CDS 40.0%
! TCCATGAATAGAGCATTTGC+TGG - chr4_1:5091032-5091051 None:intergenic 40.0%
! GGATGAAATATCTACTGGCT+TGG + chr4_1:5091049-5091068 Msa0530990:CDS 40.0%
GCTGAAGAGATCTCACAATT+TGG - chr4_1:5091091-5091110 None:intergenic 40.0%
GATGGTGAAATTGTCTACCA+AGG + chr4_1:5091206-5091225 Msa0530990:CDS 40.0%
TTGGTTTCAAATGTCCTGAG+AGG + chr4_1:5091264-5091283 Msa0530990:CDS 40.0%
TTCAAATGTCCTGAGAGGAA+AGG + chr4_1:5091269-5091288 Msa0530990:CDS 40.0%
CTTGCAGGTAACTTCAAAGA+AGG + chr4_1:5091416-5091435 Msa0530990:intron 40.0%
AGAAGGATCAAGAGCAGTAT+TGG + chr4_1:5091433-5091452 Msa0530990:CDS 40.0%
GAAGGATCAAGAGCAGTATT+GGG + chr4_1:5091434-5091453 Msa0530990:CDS 40.0%
TTCAATCATACCATGTTGGG+AGG + chr4_1:5091511-5091530 Msa0530990:CDS 40.0%
TCATTGCAATTGTTGCCATG+AGG - chr4_1:5091811-5091830 None:intergenic 40.0%
CGCAATGGTCATTGAAAGTT+CGG - chr4_1:5091939-5091958 None:intergenic 40.0%
CCCATGAAGGAAAAAACAGA+AGG - chr4_1:5091991-5092010 None:intergenic 40.0%
!! CTTTTTGGAAGTTGCTGCTT+GGG + chr4_1:5092051-5092070 Msa0530990:CDS 40.0%
GATTTGATCCTGATGTTACG+AGG + chr4_1:5092098-5092117 Msa0530990:CDS 40.0%
GTTCTTTACCTCGTAACATC+AGG - chr4_1:5092109-5092128 None:intergenic 40.0%
!! GTAGTGTTACTTATGGTGTG+AGG + chr4_1:5092169-5092188 Msa0530990:intron 40.0%
CTGATAAACCAAATGGCTTC+TGG + chr4_1:5092237-5092256 Msa0530990:CDS 40.0%
ATGATTGTGGCCAACACATT+TGG + chr4_1:5092294-5092313 Msa0530990:CDS 40.0%
TGATTGTGGCCAACACATTT+GGG + chr4_1:5092295-5092314 Msa0530990:CDS 40.0%
! AAGAAGTGTGAGAAGTGCAA+AGG - chr4_1:5092322-5092341 None:intergenic 40.0%
CTCACACTTCTTACATTAGG+TGG + chr4_1:5092330-5092349 Msa0530990:CDS 40.0%
CGGTTATTTGAACTCACTTC+TGG - chr4_1:5092367-5092386 None:intergenic 40.0%
!! ATCAAAAGCTGGTGGATTTG+GGG + chr4_1:5092660-5092679 Msa0530990:CDS 40.0%
!!! ATTCAAGTTTTGGAGTCTCG+TGG + chr4_1:5092877-5092896 Msa0530990:CDS 40.0%
! GATTCTTCACAGAAGCACAT+TGG + chr4_1:5092899-5092918 Msa0530990:CDS 40.0%
! TCACAGAAGCACATTGGTAT+TGG + chr4_1:5092905-5092924 Msa0530990:CDS 40.0%
! GAAGCACATTGGTATTGGAT+AGG + chr4_1:5092910-5092929 Msa0530990:CDS 40.0%
! CATTGGTATTGGATAGGGAT+TGG + chr4_1:5092916-5092935 Msa0530990:CDS 40.0%
!! ATAGGGATTGGAGCATTGAT+AGG + chr4_1:5092928-5092947 Msa0530990:CDS 40.0%
AACGAAGTTACTCACGATCA+AGG - chr4_1:5092999-5093018 None:intergenic 40.0%
TCAGAAGACAGCACAACAAA+TGG + chr4_1:5093121-5093140 Msa0530990:CDS 40.0%
ACGCGGTAATTCAACTTCTT+GGG - chr4_1:5093152-5093171 None:intergenic 40.0%
TACGCGGTAATTCAACTTCT+TGG - chr4_1:5093153-5093172 None:intergenic 40.0%
GAAGTTGAATTACCGCGTAT+AGG + chr4_1:5093154-5093173 Msa0530990:CDS 40.0%
AGGAGGATCTTATAATGGTG+CGG + chr4_1:5093269-5093288 Msa0530990:CDS 40.0%
GCTATAGAATGCGGTTCAAA+AGG - chr4_1:5093330-5093349 None:intergenic 40.0%
TCGTCAAAGGCTATAGAATG+CGG - chr4_1:5093339-5093358 None:intergenic 40.0%
ATATTCTGTTGACATGCCAC+AGG + chr4_1:5093365-5093384 Msa0530990:CDS 40.0%
CTCTTGAGATTCTAATTGGC+AGG + chr4_1:5093462-5093481 Msa0530990:intron 40.0%
!!! GTTTTGGCTGGTAGAAAAAC+CGG + chr4_1:5093613-5093632 Msa0530990:CDS 40.0%
AAACCGGTGGTTATATTGAC+GGG + chr4_1:5093629-5093648 Msa0530990:CDS 40.0%
! GACGGGAGCATAAAAATTTC+TGG + chr4_1:5093646-5093665 Msa0530990:CDS 40.0%
AGACAGTAACATGAGGAGAA+TGG - chr4_1:5093732-5093751 None:intergenic 40.0%
GACTCATAGACAGTAACATG+AGG - chr4_1:5093739-5093758 None:intergenic 40.0%
! CTATGAGTCATTGGTCTACT+CGG + chr4_1:5093750-5093769 Msa0530990:CDS 40.0%
GTATTTGAATCAACGTCTGC+TGG - chr4_1:5093790-5093809 None:intergenic 40.0%
GATGTTCATTGACGAAGTCA+TGG + chr4_1:5093936-5093955 Msa0530990:intron 40.0%
CCAACCAAAGAGTTTCTCAA+TGG - chr4_1:5093979-5093998 None:intergenic 40.0%
CCATTGAGAAACTCTTTGGT+TGG + chr4_1:5093976-5093995 Msa0530990:CDS 40.0%
CTAGCATCTAATCCAGATGT+AGG - chr4_1:5094099-5094118 None:intergenic 40.0%
CAATTGTAATGCGAACCGTT+AGG + chr4_1:5094127-5094146 Msa0530990:CDS 40.0%
CAGTTATTCCTCATGAAACG+CGG + chr4_1:5094314-5094333 Msa0530990:intron 40.0%
!! TCTGTTGTTTAGAGCATTGG+AGG + chr4_1:5094495-5094514 Msa0530990:intron 40.0%
!! CTGTTGTTTAGAGCATTGGA+GGG + chr4_1:5094496-5094515 Msa0530990:intron 40.0%
!! TGTTGTTTAGAGCATTGGAG+GGG + chr4_1:5094497-5094516 Msa0530990:intron 40.0%
ATGGCTATAATCCAGCAACT+TGG + chr4_1:5094535-5094554 Msa0530990:CDS 40.0%
TAATCCAGCAACTTGGATGT+TGG + chr4_1:5094542-5094561 Msa0530990:CDS 40.0%
TCCGCACAAGAACTTACTTT+AGG + chr4_1:5094576-5094595 Msa0530990:CDS 40.0%
!! AAATGATTGCGAGTATTGGG+CGG - chr4_1:5094804-5094823 None:intergenic 40.0%
! GTTTTCATAGGCCTGATGTT+TGG + chr4_1:5094911-5094930 Msa0530990:CDS 40.0%
GAGCTGGAAATCAACAAAAG+AGG - chr4_1:5095048-5095067 None:intergenic 40.0%
TATACTGCTGTTCTCTTCCT+TGG + chr4_1:5095105-5095124 Msa0530990:CDS 40.0%
ATACTGCTGTTCTCTTCCTT+GGG + chr4_1:5095106-5095125 Msa0530990:CDS 40.0%
TTCTATAGAGAAAGAGCTGC+TGG + chr4_1:5095180-5095199 Msa0530990:CDS 40.0%
TCTATAGAGAAAGAGCTGCT+GGG + chr4_1:5095181-5095200 Msa0530990:CDS 40.0%
CTAGGAATGCCGTTCTAATA+AGG - chr4_1:5095333-5095352 None:intergenic 40.0%
CAGGATTTGATCACAGAGTT+CGG + chr4_1:5095394-5095413 Msa0530990:intron 40.0%
GAAAATCATTGCAGCCACAT+TGG - chr4_1:5095444-5095463 None:intergenic 40.0%
AACTCACTTTCTCTTGTCAC+AGG + chr4_1:5095665-5095684 Msa0530990:intron 40.0%
ATGCCATGATTGGATTTGAG+TGG + chr4_1:5095745-5095764 Msa0530990:CDS 40.0%
AGTCCACTCAAATCCAATCA+TGG - chr4_1:5095751-5095770 None:intergenic 40.0%
CTTCACCTTCTATGGTATGA+TGG + chr4_1:5095821-5095840 Msa0530990:CDS 40.0%
TACAGCCATCATACCATAGA+AGG - chr4_1:5095829-5095848 None:intergenic 40.0%
ATTGAAGCGACATGGTGATT+TGG - chr4_1:5095861-5095880 None:intergenic 40.0%
! CTGCTGCATTTTACGCAATT+TGG + chr4_1:5095886-5095905 Msa0530990:CDS 40.0%
TAAAGATCAGTGGCACTTAC+AGG - chr4_1:5095942-5095961 None:intergenic 40.0%
GGACTGATTGCATCACAATT+TGG + chr4_1:5096124-5096143 Msa0530990:CDS 40.0%
GGTATGAAGCATGACTTCAT+AGG + chr4_1:5096211-5096230 Msa0530990:CDS 40.0%
TTTGTGCAGTTGTGGTTGTT+GGG + chr4_1:5096236-5096255 Msa0530990:CDS 40.0%
AGTCCTTCAACTTCCAAAGA+CGG + chr4_1:5096299-5096318 Msa0530990:CDS 40.0%
AACTTCCAAAGACGGTAGAT+TGG + chr4_1:5096307-5096326 Msa0530990:exon 40.0%
GCTAGAAAACTAAGTTCCCT+TGG + chr4_1:5096435-5096454 Msa0530990:three_prime_UTR 40.0%
! AGGCTTTTGCAAAGTCTTCG+CGG + chr4_1:5089171-5089190 Msa0530990:CDS 45.0%
CCGTTTGAGGAAAGGTTTGT+TGG + chr4_1:5089259-5089278 Msa0530990:CDS 45.0%
! TGTTGAGGCAGAAGCTTTTG+TGG + chr4_1:5089717-5089736 Msa0530990:CDS 45.0%
! GTTGAGGCAGAAGCTTTTGT+GGG + chr4_1:5089718-5089737 Msa0530990:CDS 45.0%
! AGAAGCTTTTGTGGGAGGAA+GGG + chr4_1:5089726-5089745 Msa0530990:CDS 45.0%
GTGGAATAGTCAAACCTCGT+AGG + chr4_1:5089949-5089968 Msa0530990:CDS 45.0%
! CGGAAAGACCACACTTCTTT+TGG + chr4_1:5090001-5090020 Msa0530990:CDS 45.0%
TGACAAGGCCAAAAGAAGTG+TGG - chr4_1:5090012-5090031 None:intergenic 45.0%
!!! ACACTTCTTTTGGCCTTGTC+AGG + chr4_1:5090011-5090030 Msa0530990:CDS 45.0%
ATTGTGTCCTCCAGGTATCT+GGG + chr4_1:5090233-5090252 Msa0530990:intron 45.0%
!! CGTGTGGTTTTTCAGAAACG+AGG - chr4_1:5090460-5090479 None:intergenic 45.0%
AGTATACTTCCGAACACGTG+TGG - chr4_1:5090476-5090495 None:intergenic 45.0%
AAGACATCAACATCTGGGTC+TGG - chr4_1:5090644-5090663 None:intergenic 45.0%
GATATACAGGCAATGGCAAC+TGG + chr4_1:5090765-5090784 Msa0530990:intron 45.0%
CAGTTGCTACACTTTCCTGT+TGG - chr4_1:5090794-5090813 None:intergenic 45.0%
GTAGGGAATGAAATGTTGCG+TGG + chr4_1:5090954-5090973 Msa0530990:CDS 45.0%
GAAATGTTGCGTGGTATCTC+CGG + chr4_1:5090963-5090982 Msa0530990:CDS 45.0%
ACCACAGGAGAAATGTTGGT+TGG + chr4_1:5091005-5091024 Msa0530990:CDS 45.0%
TCCAACCAACATTTCTCCTG+TGG - chr4_1:5091009-5091028 None:intergenic 45.0%
AGTTCATAAGTCTCTGGTGC+TGG - chr4_1:5091161-5091180 None:intergenic 45.0%
GAATATGTTCTCGAGGTCCT+TGG - chr4_1:5091226-5091245 None:intergenic 45.0%
TACCATGTTGGGAGGAGAAT+CGG + chr4_1:5091519-5091538 Msa0530990:CDS 45.0%
ATAGACACCTCCACCATTCA+AGG - chr4_1:5091867-5091886 None:intergenic 45.0%
!! AATGGTGGAGGTGTCTATTC+TGG + chr4_1:5091869-5091888 Msa0530990:CDS 45.0%
GAAACTAGGAAGCTTCGCAA+TGG - chr4_1:5091954-5091973 None:intergenic 45.0%
GGTATAGCATATGCCCATGA+AGG - chr4_1:5092004-5092023 None:intergenic 45.0%
GGGCATATGCTATACCTACA+TGG + chr4_1:5092008-5092027 Msa0530990:CDS 45.0%
GGAATCTTGAGGATCCATGT+AGG - chr4_1:5092025-5092044 None:intergenic 45.0%
CCAAGCAGCAACTTCCAAAA+AGG - chr4_1:5092053-5092072 None:intergenic 45.0%
!! CCTTTTTGGAAGTTGCTGCT+TGG + chr4_1:5092050-5092069 Msa0530990:CDS 45.0%
TTTCGAGCTATTGCAGCACT+TGG + chr4_1:5092264-5092283 Msa0530990:CDS 45.0%
TGCAAAGGACCCAAATGTGT+TGG - chr4_1:5092307-5092326 None:intergenic 45.0%
CAGAGGATATCAAAAGCTGG+TGG + chr4_1:5092652-5092671 Msa0530990:intron 45.0%
CATGGTTCCAACTATCTCCA+AGG - chr4_1:5092740-5092759 None:intergenic 45.0%
TGTTATGCAGCAAGTTCAGG+AGG + chr4_1:5093252-5093271 Msa0530990:intron 45.0%
CTCTTCTCTCTCTTTGGCTA+GGG - chr4_1:5093296-5093315 None:intergenic 45.0%
CCATTCCTCTTCTCTCTCTT+TGG - chr4_1:5093302-5093321 None:intergenic 45.0%
CCAAAGAGAGAGAAGAGGAA+TGG + chr4_1:5093299-5093318 Msa0530990:CDS 45.0%
TGGCAGGAAATGAAGGTTCA+AGG + chr4_1:5093478-5093497 Msa0530990:intron 45.0%
GGCAGGAAATGAAGGTTCAA+GGG + chr4_1:5093479-5093498 Msa0530990:intron 45.0%
GCAGGAAATGAAGGTTCAAG+GGG + chr4_1:5093480-5093499 Msa0530990:intron 45.0%
GAAGGTTCAAGGGGTAATAG+AGG + chr4_1:5093489-5093508 Msa0530990:CDS 45.0%
!!! GTACTTTTGAAGGGTGTCAG+TGG + chr4_1:5093520-5093539 Msa0530990:CDS 45.0%
ATTAAGGCTGTGAGAACACC+AGG - chr4_1:5093556-5093575 None:intergenic 45.0%
TGGTGTTCTCACAGCCTTAA+TGG + chr4_1:5093555-5093574 Msa0530990:CDS 45.0%
GGTGTTCTCACAGCCTTAAT+GGG + chr4_1:5093556-5093575 Msa0530990:CDS 45.0%
GAAACGTTTGCTCGAATCTC+CGG + chr4_1:5093685-5093704 Msa0530990:CDS 45.0%
TGACGAAGTCATGGAACTAG+TGG + chr4_1:5093945-5093964 Msa0530990:CDS 45.0%
!! AACTCTTTGGTTGGTTTGCC+TGG + chr4_1:5093985-5094004 Msa0530990:CDS 45.0%
GTTGAAAGACCATTCACACC+AGG - chr4_1:5094006-5094025 None:intergenic 45.0%
TTTCAACCGAACAACGCAAG+AGG + chr4_1:5094019-5094038 Msa0530990:CDS 45.0%
! AGTTAGCCTCTTGCGTTGTT+CGG - chr4_1:5094028-5094047 None:intergenic 45.0%
TTCATGGATGAGCCTACATC+TGG + chr4_1:5094084-5094103 Msa0530990:CDS 45.0%
AATGCGAACCGTTAGGAACA+CGG + chr4_1:5094134-5094153 Msa0530990:CDS 45.0%
TGTGTCAACCGTGTTCCTAA+CGG - chr4_1:5094145-5094164 None:intergenic 45.0%
CGCGTTTCATGAGGAATAAC+TGG - chr4_1:5094316-5094335 None:intergenic 45.0%
TTATTCCTCATGAAACGCGG+AGG + chr4_1:5094317-5094336 Msa0530990:CDS 45.0%
ACTTCCAACATCCAAGTTGC+TGG - chr4_1:5094549-5094568 None:intergenic 45.0%
AGATCATTTGAACCAGGAGC+AGG - chr4_1:5094773-5094792 None:intergenic 45.0%
!! TCCAATGCTTGGCTTGCTTA+TGG + chr4_1:5094828-5094847 Msa0530990:CDS 45.0%
TCCATAAGCAAGCCAAGCAT+TGG - chr4_1:5094832-5094851 None:intergenic 45.0%
! AACCTCACAGAAGTGTATGG+CGG - chr4_1:5094881-5094900 None:intergenic 45.0%
!! GGAACAATATTCTGGGACCT+TGG + chr4_1:5094932-5094951 Msa0530990:CDS 45.0%
!! CAATATTCTGGGACCTTGGA+AGG + chr4_1:5094936-5094955 Msa0530990:CDS 45.0%
! CAGGTCTTGTCTATTTGAGC+TGG - chr4_1:5095064-5095083 None:intergenic 45.0%
CAAGACCTGTTTAATGCCCT+CGG + chr4_1:5095075-5095094 Msa0530990:CDS 45.0%
AGCAGTATACATCGAACCGA+GGG - chr4_1:5095094-5095113 None:intergenic 45.0%
TACTGCTGTTCTCTTCCTTG+GGG + chr4_1:5095107-5095126 Msa0530990:CDS 45.0%
GTTGTACAGCCGATGAATTC+TGG - chr4_1:5095134-5095153 None:intergenic 45.0%
GATCTTTCAACTGCTACCAC+TGG - chr4_1:5095156-5095175 None:intergenic 45.0%
ATTACCTGTGCGAACGCATA+AGG - chr4_1:5095222-5095241 None:intergenic 45.0%
AATGCTAACAGAGAACGCAC+AGG + chr4_1:5095375-5095394 Msa0530990:intron 45.0%
CACATTGGAGTCAAAGAGGT+AGG - chr4_1:5095429-5095448 None:intergenic 45.0%
CTACCTCTTTGACTCCAATG+TGG + chr4_1:5095427-5095446 Msa0530990:intron 45.0%
GCAGCTTGGACGAAAACATA+AGG - chr4_1:5095705-5095724 None:intergenic 45.0%
TTCGTCCAAGCTGCATCATA+TGG + chr4_1:5095711-5095730 Msa0530990:CDS 45.0%
TGACACCATATGATGCAGCT+TGG - chr4_1:5095719-5095738 None:intergenic 45.0%
! GGACTCTAGCGAAGTTCTTT+TGG + chr4_1:5095766-5095785 Msa0530990:CDS 45.0%
TTCGACAGATGATTCCTGTC+TGG + chr4_1:5096056-5096075 Msa0530990:intron 45.0%
CCAGTGTCTTGGACACTATA+CGG + chr4_1:5096103-5096122 Msa0530990:CDS 45.0%
CATAGGAGTTTGTGCAGTTG+TGG + chr4_1:5096228-5096247 Msa0530990:CDS 45.0%
GTTTGTGCAGTTGTGGTTGT+TGG + chr4_1:5096235-5096254 Msa0530990:CDS 45.0%
! CTACCGTCTTTGGAAGTTGA+AGG - chr4_1:5096305-5096324 None:intergenic 45.0%
AGAGTCCAATCTACCGTCTT+TGG - chr4_1:5096315-5096334 None:intergenic 45.0%
TGGACTCTATCAGCCAAGTT+TGG + chr4_1:5096327-5096346 Msa0530990:three_prime_UTR 45.0%
ACTCTATCAGCCAAGTTTGG+TGG + chr4_1:5096330-5096349 Msa0530990:three_prime_UTR 45.0%
!! AAAAAATAAATAAATTAAAG+TGG + chr4_1:5094435-5094454 Msa0530990:intron 5.0%
! CAGAAGCTTTTGTGGGAGGA+AGG + chr4_1:5089725-5089744 Msa0530990:CDS 50.0%
AGAAGCAGTGTCATCCTACG+AGG - chr4_1:5089966-5089985 None:intergenic 50.0%
CGTAGGATGACACTGCTTCT+TGG + chr4_1:5089966-5089985 Msa0530990:CDS 50.0%
CTTCTTGGTCCTCCAAGTTC+CGG + chr4_1:5089981-5090000 Msa0530990:CDS 50.0%
AGTGTGGTCTTTCCGGAACT+TGG - chr4_1:5089996-5090015 None:intergenic 50.0%
GGGATCAAGCTTTCCTGACA+AGG - chr4_1:5090027-5090046 None:intergenic 50.0%
TCGATGTCATTGTGTCCTCC+AGG + chr4_1:5090225-5090244 Msa0530990:intron 50.0%
CATTGTGTCCTCCAGGTATC+TGG + chr4_1:5090232-5090251 Msa0530990:intron 50.0%
AAGTCACTCTCCCAGATACC+TGG - chr4_1:5090246-5090265 None:intergenic 50.0%
CATAACGTGATCCGACACCT+TGG - chr4_1:5090387-5090406 None:intergenic 50.0%
!! CAAGGTGTCGGATCACGTTA+TGG + chr4_1:5090385-5090404 Msa0530990:CDS 50.0%
CAGCTCAGCCAACAAGTCTA+TGG - chr4_1:5090591-5090610 None:intergenic 50.0%
ATACAGGCAATGGCAACTGG+AGG + chr4_1:5090768-5090787 Msa0530990:intron 50.0%
ATGCACCGCGATTCCTTGAA+TGG + chr4_1:5091851-5091870 Msa0530990:CDS 50.0%
CTCCACCATTCAAGGAATCG+CGG - chr4_1:5091859-5091878 None:intergenic 50.0%
CCTCTTCTCTCTCTTTGGCT+AGG - chr4_1:5093297-5093316 None:intergenic 50.0%
CCTAGCCAAAGAGAGAGAAG+AGG + chr4_1:5093294-5093313 Msa0530990:CDS 50.0%
! AGGGTGTCAGTGGTGCATTT+AGG + chr4_1:5093530-5093549 Msa0530990:CDS 50.0%
ACAGCCTTAATGGGAGTCAG+TGG + chr4_1:5093565-5093584 Msa0530990:CDS 50.0%
!! AGCTCCACTGACTCCCATTA+AGG - chr4_1:5093572-5093591 None:intergenic 50.0%
TTAATGGGAGTCAGTGGAGC+TGG + chr4_1:5093571-5093590 Msa0530990:CDS 50.0%
TTGGCTGGTAGAAAAACCGG+TGG + chr4_1:5093616-5093635 Msa0530990:CDS 50.0%
GCTCCCGTCAATATAACCAC+CGG - chr4_1:5093635-5093654 None:intergenic 50.0%
! AGTCATTGGTCTACTCGGCT+TGG + chr4_1:5093755-5093774 Msa0530990:CDS 50.0%
!! GTTGGTTTGCCTGGTGTGAA+TGG + chr4_1:5093994-5094013 Msa0530990:CDS 50.0%
GTTAGGAACACGGTTGACAC+AGG + chr4_1:5094144-5094163 Msa0530990:CDS 50.0%
TGACTAGAATGACGACCCAG+TGG - chr4_1:5094362-5094381 None:intergenic 50.0%
GAATTAGGCAAACCTGCTCC+TGG + chr4_1:5094758-5094777 Msa0530990:CDS 50.0%
! ACCTCACAGAAGTGTATGGC+GGG - chr4_1:5094880-5094899 None:intergenic 50.0%
!! TCGAACCGAGGGCATTAAAC+AGG - chr4_1:5095083-5095102 None:intergenic 50.0%
CAGCAGTATACATCGAACCG+AGG - chr4_1:5095095-5095114 None:intergenic 50.0%
CCTTGGGGTCCAGAATTCAT+CGG + chr4_1:5095122-5095141 Msa0530990:CDS 50.0%
! TTCATCGGCTGTACAACCAG+TGG + chr4_1:5095137-5095156 Msa0530990:CDS 50.0%
CTGTGCGAACGCATAAGGTA+AGG - chr4_1:5095217-5095236 None:intergenic 50.0%
CTTACCTTATGCGTTCGCAC+AGG + chr4_1:5095215-5095234 Msa0530990:CDS 50.0%
CAGCCACATTGGAGTCAAAG+AGG - chr4_1:5095433-5095452 None:intergenic 50.0%
CAGCAACGATTGAAGCGACA+TGG - chr4_1:5095869-5095888 None:intergenic 50.0%
GACAGATGATTCCTGTCTGG+TGG + chr4_1:5096059-5096078 Msa0530990:intron 50.0%
TGATTCCTGTCTGGTGGAGA+TGG + chr4_1:5096065-5096084 Msa0530990:CDS 50.0%
TAGTACCATCTCCACCAGAC+AGG - chr4_1:5096073-5096092 None:intergenic 50.0%
TCTGGTGGAGATGGTACTAC+TGG + chr4_1:5096074-5096093 Msa0530990:CDS 50.0%
CTGGTGGAGATGGTACTACT+GGG + chr4_1:5096075-5096094 Msa0530990:CDS 50.0%
TAGTGTCCAAGACACTGGAC+AGG - chr4_1:5096101-5096120 None:intergenic 50.0%
CCGTATAGTGTCCAAGACAC+TGG - chr4_1:5096106-5096125 None:intergenic 50.0%
! GAGGCAGAAGCTTTTGTGGG+AGG + chr4_1:5089721-5089740 Msa0530990:CDS 55.0%
GTGGTCTTTCCGGAACTTGG+AGG - chr4_1:5089993-5090012 None:intergenic 55.0%
TCACTCTCCCAGATACCTGG+AGG - chr4_1:5090243-5090262 None:intergenic 55.0%
! GCTTTCTCAGCAAGGTGCCA+AGG + chr4_1:5090367-5090386 Msa0530990:CDS 55.0%
! TCAGCAAGGTGCCAAGGTGT+CGG + chr4_1:5090373-5090392 Msa0530990:CDS 55.0%
AATGGCAACTGGAGGCCAAC+AGG + chr4_1:5090776-5090795 Msa0530990:CDS 55.0%
ATGTTGCGTGGTATCTCCGG+AGG + chr4_1:5090966-5090985 Msa0530990:CDS 55.0%
!! CATAAGTCTCTGGTGCTGGC+TGG - chr4_1:5091157-5091176 None:intergenic 55.0%
TCAGCTGCACCTTTCCTCTC+AGG - chr4_1:5091281-5091300 None:intergenic 55.0%
CTCCGATTCTCCTCCCAACA+TGG - chr4_1:5091524-5091543 None:intergenic 55.0%
CACCGCGATTCCTTGAATGG+TGG + chr4_1:5091854-5091873 Msa0530990:CDS 55.0%
CGCGATTCCTTGAATGGTGG+AGG + chr4_1:5091857-5091876 Msa0530990:CDS 55.0%
!! GCTGGTGGATTTGGGGTTAC+TGG + chr4_1:5092667-5092686 Msa0530990:CDS 55.0%
GTCAGTGGTGCATTTAGGCC+TGG + chr4_1:5093535-5093554 Msa0530990:CDS 55.0%
CTTCTCCTCCGCGTTTCATG+AGG - chr4_1:5094325-5094344 None:intergenic 55.0%
ACCCGCCATACACTTCTGTG+AGG + chr4_1:5094876-5094895 Msa0530990:CDS 55.0%
CCGATGAATTCTGGACCCCA+AGG - chr4_1:5095125-5095144 None:intergenic 55.0%
TAATACCGTACCTGGGGGTG+TGG + chr4_1:5095507-5095526 Msa0530990:intron 55.0%
TCAGTGGCACTTACAGGTCG+CGG - chr4_1:5095936-5095955 None:intergenic 55.0%
TGTGGTTGTTGGGACTGCAG+TGG + chr4_1:5096246-5096265 Msa0530990:CDS 55.0%
GTGGTTGTTGGGACTGCAGT+GGG + chr4_1:5096247-5096266 Msa0530990:CDS 55.0%
!! GGTTTGTTGGCGACATCGCG+TGG + chr4_1:5089272-5089291 Msa0530990:CDS 60.0%
ACTGGGCCTGTCCAGTGTCT+TGG + chr4_1:5096092-5096111 Msa0530990:CDS 60.0%
! TACCGTACCTGGGGGTGTGG+TGG + chr4_1:5095510-5095529 Msa0530990:intron 65.0%
! ACCGTACCTGGGGGTGTGGT+GGG + chr4_1:5095511-5095530 Msa0530990:intron 65.0%
GCCCACCACACCCCCAGGTA+CGG - chr4_1:5095515-5095534 None:intergenic 70.0%
! CGCTCGCCCACCACACCCCC+AGG - chr4_1:5095520-5095539 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 5089080 5096493 5089080 ID=Msa0530990;Name=Msa0530990
chr4_1 mRNA 5089080 5096493 5089080 ID=Msa0530990-mRNA-1;Parent=Msa0530990;Name=Msa0530990-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0.28|0.22|1|1|1|22|169|1437
chr4_1 exon 5089080 5089420 5089080 ID=Msa0530990-mRNA-1:exon:1556;Parent=Msa0530990-mRNA-1
chr4_1 exon 5089669 5089789 5089669 ID=Msa0530990-mRNA-1:exon:1557;Parent=Msa0530990-mRNA-1
chr4_1 exon 5089882 5090055 5089882 ID=Msa0530990-mRNA-1:exon:1558;Parent=Msa0530990-mRNA-1
chr4_1 exon 5090247 5090406 5090247 ID=Msa0530990-mRNA-1:exon:1559;Parent=Msa0530990-mRNA-1
chr4_1 exon 5090594 5090670 5090594 ID=Msa0530990-mRNA-1:exon:1560;Parent=Msa0530990-mRNA-1
chr4_1 exon 5090774 5090827 5090774 ID=Msa0530990-mRNA-1:exon:1561;Parent=Msa0530990-mRNA-1
chr4_1 exon 5090921 5091313 5090921 ID=Msa0530990-mRNA-1:exon:1562;Parent=Msa0530990-mRNA-1
chr4_1 exon 5091423 5091704 5091423 ID=Msa0530990-mRNA-1:exon:1563;Parent=Msa0530990-mRNA-1
chr4_1 exon 5091803 5092119 5091803 ID=Msa0530990-mRNA-1:exon:1564;Parent=Msa0530990-mRNA-1
chr4_1 exon 5092209 5092369 5092209 ID=Msa0530990-mRNA-1:exon:1565;Parent=Msa0530990-mRNA-1
chr4_1 exon 5092655 5092758 5092655 ID=Msa0530990-mRNA-1:exon:1566;Parent=Msa0530990-mRNA-1
chr4_1 exon 5092847 5093003 5092847 ID=Msa0530990-mRNA-1:exon:1567;Parent=Msa0530990-mRNA-1
chr4_1 exon 5093086 5093175 5093086 ID=Msa0530990-mRNA-1:exon:1568;Parent=Msa0530990-mRNA-1
chr4_1 exon 5093262 5093386 5093262 ID=Msa0530990-mRNA-1:exon:1569;Parent=Msa0530990-mRNA-1
chr4_1 exon 5093484 5093816 5093484 ID=Msa0530990-mRNA-1:exon:1570;Parent=Msa0530990-mRNA-1
chr4_1 exon 5093937 5094227 5093937 ID=Msa0530990-mRNA-1:exon:1571;Parent=Msa0530990-mRNA-1
chr4_1 exon 5094317 5094400 5094317 ID=Msa0530990-mRNA-1:exon:1572;Parent=Msa0530990-mRNA-1
chr4_1 exon 5094507 5094640 5094507 ID=Msa0530990-mRNA-1:exon:1573;Parent=Msa0530990-mRNA-1
chr4_1 exon 5094736 5094963 5094736 ID=Msa0530990-mRNA-1:exon:1574;Parent=Msa0530990-mRNA-1
chr4_1 exon 5095065 5095236 5095065 ID=Msa0530990-mRNA-1:exon:1575;Parent=Msa0530990-mRNA-1
chr4_1 exon 5095687 5095941 5095687 ID=Msa0530990-mRNA-1:exon:1576;Parent=Msa0530990-mRNA-1
chr4_1 exon 5096064 5096493 5096064 ID=Msa0530990-mRNA-1:exon:1577;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5089080 5089420 5089080 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5089669 5089789 5089669 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5089882 5090055 5089882 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5090247 5090406 5090247 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5090594 5090670 5090594 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5090774 5090827 5090774 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5090921 5091313 5090921 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5091423 5091704 5091423 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5091803 5092119 5091803 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5092209 5092369 5092209 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5092655 5092758 5092655 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5092847 5093003 5092847 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5093086 5093175 5093086 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5093262 5093386 5093262 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5093484 5093816 5093484 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5093937 5094227 5093937 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5094317 5094400 5094317 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5094507 5094640 5094507 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5094736 5094963 5094736 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5095065 5095236 5095065 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5095687 5095941 5095687 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 CDS 5096064 5096324 5096064 ID=Msa0530990-mRNA-1:cds;Parent=Msa0530990-mRNA-1
chr4_1 three_prime_UTR 5096325 5096493 5096325 ID=Msa0530990-mRNA-1:three_prime_utr;Parent=Msa0530990-mRNA-1
Gene Sequence

>Msa0530990

ATGGAAGGAAGTGATATATATAGTGCAAGTAACAGTCTCCGGTTTAGTATGAGAAGTTCTTCTACTACAGGTTGGAGAAACGTTACAATGGAGGCTTTTGCAAAGTCTTCGCGGCGCGAAGAAGATGATGATGAAGAAGCTCTTAAATGGGCTGCACTTGAAAAACTCCCTACTTATAACCGTTTGAGGAAAGGTTTGTTGGCGACATCGCGTGGTGCCAATGAGATTGATATAACAGATCTTGGATTTCAAGAGAAACAGAAACTGTTGGATAGGTTGATTAATGTTGCTGAAGAGGGAAATGAGAAGTTTTTGTTGAAGCTCAAGGAAAGAATTGATAGAGTTGGGATTGAGATTCCAACAATTGAAGTTAGATATGAGCACCTAAATGTTGAGGCAGAAGCTTTTGTGGGAGGAAGGGCTTTGCCAACTTTGTTGAACTCAGTTACTAATACAGTCGAGAGTATCTTGATTTCTCTCCATATTCTCACAAGCAGAAAGAAACAAATGACTATCCTTAAAGATGTAAGTGGAATAGTCAAACCTCGTAGGATGACACTGCTTCTTGGTCCTCCAAGTTCCGGAAAGACCACACTTCTTTTGGCCTTGTCAGGAAAGCTTGATCCCAATCTCAAGGTATCTGGGAGAGTGACTTATAATGGACATGGAATGGATGAATTTGTACCTCAGAGAACTGCTGCATATATTAGTCAACATGATGTTCATATTGGAGAAATGACTGTGAGGGAAACATTGGCTTTCTCAGCAAGGTGCCAAGGTGTCGGATCACGTTATGACTTGTTGGCTGAGCTGTCTAGAAGAGAAAAGGAAGCAAATATTAAGCCAGACCCAGATGTTGATGTCTTCATGAAGGCAATGGCAACTGGAGGCCAACAGGAAAGTGTAGCAACTGATTATGTACTAAAGCTTTTGGGATTGGATGTATGTGCTGATACTATGGTAGGGAATGAAATGTTGCGTGGTATCTCCGGAGGACAAAGAAAGAGAGTTACCACAGGAGAAATGTTGGTTGGACCAGCAAATGCTCTATTCATGGATGAAATATCTACTGGCTTGGACAGTTCCACAACTTTCCAAATTGTGAGATCTCTTCAGCAATATGTTCACATTCTAAATGGAACTGCAGTTATCTCTTTACTCCAGCCAGCACCAGAGACTTATGAACTTTTCGATGACATTATTCTTATATCTGATGGTGAAATTGTCTACCAAGGACCTCGAGAACATATTCTTGAATTTTTTGAATCAGTTGGTTTCAAATGTCCTGAGAGGAAAGGTGCAGCTGACTTTCTTCAAGAAGTAACTTCAAAGAAGGATCAAGAGCAGTATTGGGTAGACAGAGAAAAACCATACAGGTTTGTAACTGTTACTCAATTTGCTGAGGCATTTCAATCATACCATGTTGGGAGGAGAATCGGAGATGAGCTTGCAATTCCATTTGACAAATCTAAGAGTCATCCAGCAGCATTAACAACTAAAAAGTATGGTGTTAACAAGAAGGAACTGTTAAAGGCTAACTTCTCAAGAGAGTATTTGCTTATGAAAAGAAATTCCTTTGTTTACATCTTCAAGATATGTCAGCTTCTCCTCATGGCAACAATTGCAATGACACTATTTTTAAGAACTGAGATGCACCGCGATTCCTTGAATGGTGGAGGTGTCTATTCTGGTGCTTTATTTTTCGCAGTAGTTATGATTATGTTTAATGGAATGGCCGAACTTTCAATGACCATTGCGAAGCTTCCTAGTTTCTACAAGCAAAGAGACCTTCTGTTTTTTCCTTCATGGGCATATGCTATACCTACATGGATCCTCAAGATTCCTATTACCTTTTTGGAAGTTGCTGCTTGGGTTTTTCTCACCTATTACGTAATAGGATTTGATCCTGATGTTACGAGGTTACTAAAGCAGTATCTTCTGCTATTACTGATAAACCAAATGGCTTCTGGATTATTTCGAGCTATTGCAGCACTTGGTAGAAACATGATTGTGGCCAACACATTTGGGTCCTTTGCACTTCTCACACTTCTTACATTAGGTGGCTTCGTTATGTCCAGAAAGGATATCAAAAGCTGGTGGATTTGGGGTTACTGGATTTCACCTATGATGTATGGACAAAATGCTATAATGGTGAATGAATTCCTTGGAGATAGTTGGAACCATTTTACACCAAATTCAAGTAAAACACTAGGAATTCAAGTTTTGGAGTCTCGTGGATTCTTCACAGAAGCACATTGGTATTGGATAGGGATTGGAGCATTGATAGGATTTATGTTTCTTTTCAACATATTATTCACTGTGGCTCTCACTTACCTTGATCCATTTGACAAGCCACAAGCAACAATAAATGAAGAATCAGAAGACAGCACAACAAATGGCACTACCCAAGAAGTTGAATTACCGCGTATAGCAAGTTCAGGAGGATCTTATAATGGTGCGGACCCTAGCCAAAGAGAGAGAAGAGGAATGGTTCTTCCTTTTGAACCGCATTCTATAGCCTTTGACGATGTTGTATATTCTGTTGACATGCCACAGGAAATGAAGGTTCAAGGGGTAATAGAGGATAGATTAGTACTTTTGAAGGGTGTCAGTGGTGCATTTAGGCCTGGTGTTCTCACAGCCTTAATGGGAGTCAGTGGAGCTGGTAAAACTACTTTAATGGATGTTTTGGCTGGTAGAAAAACCGGTGGTTATATTGACGGGAGCATAAAAATTTCTGGCTACCCTAAAAAGCAAGAAACGTTTGCTCGAATCTCCGGTTATTGTGAGCAGAATGATATCCATTCTCCTCATGTTACTGTCTATGAGTCATTGGTCTACTCGGCTTGGCTTCGTTTACCAGCAGACGTTGATTCAAATACCAGAAAGATGTTCATTGACGAAGTCATGGAACTAGTGGAGCTCAATCCATTGAGAAACTCTTTGGTTGGTTTGCCTGGTGTGAATGGTCTTTCAACCGAACAACGCAAGAGGCTAACTATTGCAGTTGAATTAGTGGCCAATCCATCCATAATTTTCATGGATGAGCCTACATCTGGATTAGATGCTAGAGCTGCTGCAATTGTAATGCGAACCGTTAGGAACACGGTTGACACAGGAAGAACAGTTGTTTGCACCATTCATCAACCAAGTATTGACATATTCGAAGCTTTTGATGAGTTATTCCTCATGAAACGCGGAGGAGAAGAAATATATGTTGGACCACTGGGTCGTCATTCTAGTCAATTGATCAAGTATTTTGAGAGCATTGGAGGGGTTAGTAAAATCAAAGATGGCTATAATCCAGCAACTTGGATGTTGGAAGTTTCAAGTTCCGCACAAGAACTTACTTTAGGAGTTGATTTTCATCACGCATACAAAAATTCTGAGTTGTACAGGAGAAACAAGCAACTTATAGAAGAATTAGGCAAACCTGCTCCTGGTTCAAATGATCTTCATTTCTCCGCCCAATACTCGCAATCATTTTTAGTCCAATGCTTGGCTTGCTTATGGAAACAACATTGGTCATATTGGCGCAACCCGCCATACACTTCTGTGAGGTTTTTCTTCACTGTTTTCATAGGCCTGATGTTTGGAACAATATTCTGGGACCTTGGAAGGAAATACTCAAATAGACAAGACCTGTTTAATGCCCTCGGTTCGATGTATACTGCTGTTCTCTTCCTTGGGGTCCAGAATTCATCGGCTGTACAACCAGTGGTAGCAGTTGAAAGATCTGTGTTCTATAGAGAAAGAGCTGCTGGGATGTATTCTGCCTTACCTTATGCGTTCGCACAGGTTTTAATAGAGCTACCTTATGTTTTCGTCCAAGCTGCATCATATGGTGTCATAGTTTATGCCATGATTGGATTTGAGTGGACTCTAGCGAAGTTCTTTTGGTACATATTTTTCATGTACTGTACATTATGCTACTTCACCTTCTATGGTATGATGGCTGTAGCAATTACTCCAAATCACCATGTCGCTTCAATCGTTGCTGCTGCATTTTACGCAATTTGGAATCTTTTTTCAGGATTTATCGTTCCGCGACCTATGATTCCTGTCTGGTGGAGATGGTACTACTGGGCCTGTCCAGTGTCTTGGACACTATACGGACTGATTGCATCACAATTTGGAGATATAACCAAAATCATGGAATCAGAGAATCAGACAGTTCAAGAATTCATAAGAAGTTATTTTGGTATGAAGCATGACTTCATAGGAGTTTGTGCAGTTGTGGTTGTTGGGACTGCAGTGGGCTTTGCATGTATTTTTGCTGTCTCAATCAAGTCCTTCAACTTCCAAAGACGGTAG
Protein sequence

>Msa0530990

MEGSDIYSASNSLRFSMRSSSTTGWRNVTMEAFAKSSRREEDDDEEALKWAALEKLPTYNRLRKGLLATSRGANEIDITDLGFQEKQKLLDRLINVAEEGNEKFLLKLKERIDRVGIEIPTIEVRYEHLNVEAEAFVGGRALPTLLNSVTNTVESILISLHILTSRKKQMTILKDVSGIVKPRRMTLLLGPPSSGKTTLLLALSGKLDPNLKVSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDLLAELSRREKEANIKPDPDVDVFMKAMATGGQQESVATDYVLKLLGLDVCADTMVGNEMLRGISGGQRKRVTTGEMLVGPANALFMDEISTGLDSSTTFQIVRSLQQYVHILNGTAVISLLQPAPETYELFDDIILISDGEIVYQGPREHILEFFESVGFKCPERKGAADFLQEVTSKKDQEQYWVDREKPYRFVTVTQFAEAFQSYHVGRRIGDELAIPFDKSKSHPAALTTKKYGVNKKELLKANFSREYLLMKRNSFVYIFKICQLLLMATIAMTLFLRTEMHRDSLNGGGVYSGALFFAVVMIMFNGMAELSMTIAKLPSFYKQRDLLFFPSWAYAIPTWILKIPITFLEVAAWVFLTYYVIGFDPDVTRLLKQYLLLLLINQMASGLFRAIAALGRNMIVANTFGSFALLTLLTLGGFVMSRKDIKSWWIWGYWISPMMYGQNAIMVNEFLGDSWNHFTPNSSKTLGIQVLESRGFFTEAHWYWIGIGALIGFMFLFNILFTVALTYLDPFDKPQATINEESEDSTTNGTTQEVELPRIASSGGSYNGADPSQRERRGMVLPFEPHSIAFDDVVYSVDMPQEMKVQGVIEDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGSIKISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVYSAWLRLPADVDSNTRKMFIDEVMELVELNPLRNSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGEEIYVGPLGRHSSQLIKYFESIGGVSKIKDGYNPATWMLEVSSSAQELTLGVDFHHAYKNSELYRRNKQLIEELGKPAPGSNDLHFSAQYSQSFLVQCLACLWKQHWSYWRNPPYTSVRFFFTVFIGLMFGTIFWDLGRKYSNRQDLFNALGSMYTAVLFLGVQNSSAVQPVVAVERSVFYRERAAGMYSALPYAFAQVLIELPYVFVQAASYGVIVYAMIGFEWTLAKFFWYIFFMYCTLCYFTFYGMMAVAITPNHHVASIVAAAFYAIWNLFSGFIVPRPMIPVWWRWYYWACPVSWTLYGLIASQFGDITKIMESENQTVQEFIRSYFGMKHDFIGVCAVVVVGTAVGFACIFAVSIKSFNFQRR*