AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0753500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0753500 MtrunA17_Chr5g0397971 98.965 483 5 0 1 483 1 483 0.0 1002
Msa0753500 MtrunA17_Chr5g0403931 35.232 474 288 9 6 467 11 477 1.08e-99 308
Msa0753500 MtrunA17_Chr3g0113321 34.667 450 280 6 30 472 28 470 2.34e-95 296
Msa0753500 MtrunA17_Chr3g0078411 33.761 468 294 11 5 468 7 462 4.19e-95 295
Msa0753500 MtrunA17_Chr6g0455461 34.188 468 290 12 6 468 8 462 7.48e-95 295
Msa0753500 MtrunA17_Chr7g0219961 32.196 469 307 7 1 468 3 461 1.39e-91 286
Msa0753500 MtrunA17_Chr8g0372411 34.286 420 261 5 32 443 40 452 2.21e-88 278
Msa0753500 MtrunA17_Chr7g0226771 32.640 481 305 10 3 475 8 477 1.87e-84 268
Msa0753500 MtrunA17_Chr8g0373441 35.476 389 238 6 31 411 33 416 2.38e-82 261
Msa0753500 MtrunA17_Chr8g0341951 30.820 451 294 6 2 443 5 446 7.42e-82 261
Msa0753500 MtrunA17_Chr6g0478161 31.878 458 291 8 29 477 48 493 1.54e-81 261
Msa0753500 MtrunA17_Chr4g0044851 30.843 415 278 5 30 443 36 442 2.76e-72 236
Msa0753500 MtrunA17_Chr5g0408181 30.045 446 291 11 3 443 6 435 2.71e-70 231
Msa0753500 MtrunA17_Chr8g0369791 29.111 450 299 10 27 470 30 465 3.96e-68 225
Msa0753500 MtrunA17_Chr3g0089361 30.332 422 281 7 30 446 39 452 3.01e-66 221
Msa0753500 MtrunA17_Chr8g0381571 28.355 462 310 8 2 445 5 463 7.97e-65 217
Msa0753500 MtrunA17_Chr2g0293421 28.728 456 307 7 1 442 8 459 8.12e-65 217
Msa0753500 MtrunA17_Chr8g0381541 28.294 463 311 8 2 446 5 464 2.78e-64 216
Msa0753500 MtrunA17_Chr4g0044841 30.822 438 289 7 30 464 37 463 6.36e-64 214
Msa0753500 MtrunA17_Chr8g0380471 27.477 444 311 7 31 467 34 473 6.54e-64 214
Msa0753500 MtrunA17_Chr5g0400421 28.633 461 309 9 2 446 9 465 1.18e-62 211
Msa0753500 MtrunA17_Chr3g0107501 27.751 418 296 3 31 443 33 449 2.30e-62 210
Msa0753500 MtrunA17_Chr2g0293411 27.234 470 321 8 1 453 4 469 3.90e-62 210
Msa0753500 MtrunA17_Chr5g0443401 27.511 458 318 8 20 470 27 477 4.91e-62 209
Msa0753500 MtrunA17_Chr1g0164371 28.989 445 307 5 28 471 41 477 5.68e-62 209
Msa0753500 MtrunA17_Chr1g0153371 28.539 445 301 8 6 442 5 440 8.79e-62 209
Msa0753500 MtrunA17_Chr3g0141801 27.350 468 321 8 23 476 31 493 1.94e-61 208
Msa0753500 MtrunA17_Chr5g0443731 27.397 438 311 4 23 455 21 456 2.27e-61 207
Msa0753500 MtrunA17_Chr3g0107511 27.311 476 319 6 10 467 8 474 6.02e-60 204
Msa0753500 MtrunA17_Chr8g0339861 29.139 453 302 10 1 442 13 457 1.98e-59 203
Msa0753500 MtrunA17_Chr3g0089351 28.836 378 260 4 70 446 1 370 2.16e-59 200
Msa0753500 MtrunA17_Chr8g0388921 27.725 422 296 5 31 446 34 452 2.56e-59 202
Msa0753500 MtrunA17_Chr5g0400411 27.766 461 312 10 2 446 9 464 1.23e-51 182
Msa0753500 MtrunA17_Chr8g0372711 26.353 425 305 6 22 443 37 456 2.03e-48 173
Msa0753500 MtrunA17_Chr8g0380931 26.415 424 295 10 31 444 62 478 1.07e-44 164
Msa0753500 MtrunA17_Chr5g0404861 41.860 129 75 0 315 443 5 133 2.53e-34 126
Msa0753500 MtrunA17_Chr5g0404881 28.319 226 158 2 2 223 3 228 8.28e-29 114
Msa0753500 MtrunA17_Chr5g0437001 37.342 158 83 3 332 474 1 157 5.05e-28 109
Msa0753500 MtrunA17_Chr8g0381551 24.224 322 225 7 2 305 5 325 2.26e-26 109
Msa0753500 MtrunA17_Chr8g0381561 40.351 114 66 1 332 445 3 114 8.74e-26 102
Msa0753500 MtrunA17_Chr6g0463551 34.737 190 114 5 183 364 2 189 2.75e-25 103
Msa0753500 MtrunA17_Chr2g0310391 24.738 477 305 21 1 440 1 460 2.07e-23 103
Msa0753500 MtrunA17_Chr1g0161671 24.028 283 206 5 31 305 29 310 3.81e-23 99.8
Msa0753500 MtrunA17_Chr0c19g0493771 23.129 441 292 11 67 470 218 648 6.36e-23 102
Msa0753500 MtrunA17_Chr8g0382901 23.830 470 301 14 3 444 2 442 6.69e-23 102
Msa0753500 MtrunA17_Chr8g0382901 25.163 461 285 16 22 444 483 921 4.85e-21 97.1
Msa0753500 MtrunA17_Chr5g0436981 34.266 143 93 1 30 172 27 168 1.07e-22 95.5
Msa0753500 MtrunA17_Chr4g0000171 23.313 326 229 7 2 310 5 326 1.22e-22 99.0
Msa0753500 MtrunA17_Chr2g0310381 24.528 477 298 22 1 436 1 456 1.99e-22 100
Msa0753500 MtrunA17_Chr4g0000151 38.261 115 68 2 332 446 6 117 4.45e-22 92.4
Msa0753500 MtrunA17_Chr4g0047631 23.110 463 317 14 9 444 29 479 2.38e-21 97.1
Msa0753500 MtrunA17_Chr3g0089291 24.473 237 175 3 70 305 1 234 4.03e-21 92.0
Msa0753500 MtrunA17_Chr5g0403321 24.062 453 292 16 30 443 33 472 6.34e-21 95.5
Msa0753500 MtrunA17_Chr3g0089381 28.125 192 135 2 174 364 3 192 1.07e-20 90.5
Msa0753500 MtrunA17_Chr1g0174481 22.938 497 315 18 12 462 15 489 1.65e-20 94.4
Msa0753500 MtrunA17_Chr4g0000161 25.442 283 199 7 31 305 43 321 2.76e-20 92.0
Msa0753500 MtrunA17_Chr4g0057001 23.767 446 294 20 31 443 50 482 4.18e-20 93.2
Msa0753500 MtrunA17_Chr4g0047691 23.504 468 312 17 9 444 29 482 6.57e-20 92.4
Msa0753500 MtrunA17_Chr4g0058231 20.998 481 328 17 1 443 1 467 1.36e-19 91.7
Msa0753500 MtrunA17_Chr6g0463541 39.252 107 55 3 360 460 2 104 4.26e-19 82.8
Msa0753500 MtrunA17_Chr4g0013471 22.830 311 228 6 11 313 23 329 5.23e-19 89.0
Msa0753500 MtrunA17_Chr5g0445461 22.034 472 324 15 3 444 10 467 6.11e-19 89.4
Msa0753500 MtrunA17_Chr4g0058191 20.975 472 328 17 1 443 1 456 2.02e-18 87.8
Msa0753500 MtrunA17_Chr5g0445421 21.739 460 319 13 3 444 84 520 2.23e-18 87.8
Msa0753500 MtrunA17_Chr4g0047661 22.410 473 320 18 6 444 25 484 3.94e-18 87.0
Msa0753500 MtrunA17_Chr1g0174471 21.702 470 317 13 33 462 52 510 6.36e-18 86.7
Msa0753500 MtrunA17_Chr3g0101631 20.117 512 343 17 1 472 3 488 6.78e-18 86.3
Msa0753500 MtrunA17_Chr2g0286091 22.779 439 286 16 31 434 41 461 8.21e-18 86.3
Msa0753500 MtrunA17_Chr5g0419691 24.043 470 313 15 23 457 21 481 9.94e-18 85.9
Msa0753500 MtrunA17_Chr4g0011871 23.060 451 309 14 23 443 21 463 1.15e-17 85.5
Msa0753500 MtrunA17_Chr8g0361471 20.985 467 322 14 12 444 15 468 1.61e-17 85.1
Msa0753500 MtrunA17_Chr1g0160851 23.799 458 289 18 30 449 33 468 1.91e-17 84.7
Msa0753500 MtrunA17_Chr5g0445451 19.960 496 354 15 3 470 10 490 2.11e-17 84.7
Msa0753500 MtrunA17_Chr5g0436991 30.282 142 93 2 168 307 18 155 3.04e-17 79.0
Msa0753500 MtrunA17_Chr5g0401681 22.395 451 295 15 31 446 32 462 3.13e-17 84.3
Msa0753500 MtrunA17_Chr5g0401691 21.806 454 314 11 30 456 50 489 3.14e-17 84.3
Msa0753500 MtrunA17_Chr5g0445441 20.464 474 329 12 3 444 51 508 6.85e-17 83.2
Msa0753500 MtrunA17_Chr1g0198191 21.957 460 307 14 23 443 37 483 1.14e-16 82.4
Msa0753500 MtrunA17_Chr5g0396521 27.413 259 143 7 219 441 289 538 1.66e-16 82.4
Msa0753500 MtrunA17_Chr1g0200961 21.649 485 319 14 3 448 6 468 2.01e-16 81.6
Msa0753500 MtrunA17_Chr5g0445381 21.413 467 319 13 10 444 48 498 3.15e-16 81.3
Msa0753500 MtrunA17_Chr4g0056951 25.468 267 180 9 196 451 227 485 3.30e-16 81.3
Msa0753500 MtrunA17_Chr8g0344181 22.737 453 294 14 31 444 38 473 3.81e-16 80.9
Msa0753500 MtrunA17_Chr6g0465511 20.299 468 324 15 12 444 15 468 3.91e-16 80.9
Msa0753500 MtrunA17_Chr1g0207841 23.269 361 235 12 121 444 126 481 4.94e-16 80.5
Msa0753500 MtrunA17_Chr4g0011901 23.128 454 294 17 28 443 26 462 5.52e-16 80.5
Msa0753500 MtrunA17_Chr1g0160861 24.464 233 159 7 226 449 85 309 1.03e-15 78.2
Msa0753500 MtrunA17_Chr6g0466331 20.085 468 325 15 12 444 15 468 1.07e-15 79.3
Msa0753500 MtrunA17_Chr2g0314731 26.728 217 152 4 247 460 268 480 1.13e-15 79.3
Msa0753500 MtrunA17_Chr5g0403351 21.368 468 320 16 12 443 14 469 1.87e-15 78.6
Msa0753500 MtrunA17_Chr1g0174461 21.304 460 304 18 32 450 36 478 1.99e-15 78.6
Msa0753500 MtrunA17_Chr4g0058201 21.097 474 331 18 21 463 17 478 2.29e-15 78.6
Msa0753500 MtrunA17_Chr3g0101671 20.971 453 311 14 26 444 33 472 2.30e-15 78.6
Msa0753500 MtrunA17_Chr2g0280071 22.656 512 318 22 8 472 40 520 2.33e-15 79.0
Msa0753500 MtrunA17_Chr6g0451781 28.947 228 139 8 226 435 298 520 2.55e-15 78.6
Msa0753500 MtrunA17_Chr5g0395331 23.176 466 300 17 18 444 25 471 2.70e-15 78.2
Msa0753500 MtrunA17_Chr4g0030711 21.327 422 285 11 65 444 66 482 2.91e-15 78.2
Msa0753500 MtrunA17_Chr1g0151221 21.519 474 294 15 33 444 41 498 4.86e-15 77.4
Msa0753500 MtrunA17_Chr6g0472311 22.445 499 315 18 21 465 30 510 4.99e-15 77.4
Msa0753500 MtrunA17_Chr7g0235551 23.696 460 288 18 30 443 32 474 5.26e-15 77.4
Msa0753500 MtrunA17_Chr7g0218611 21.569 459 321 12 20 448 22 471 7.32e-15 77.0
Msa0753500 MtrunA17_Chr1g0197851 20.302 463 324 14 13 444 14 462 1.10e-14 76.3
Msa0753500 MtrunA17_Chr3g0101571 21.973 446 307 15 28 444 33 466 1.54e-14 75.9
Msa0753500 MtrunA17_Chr4g0011881 24.622 463 291 19 20 443 19 462 1.64e-14 75.9
Msa0753500 MtrunA17_Chr8g0344191 22.355 501 278 17 11 444 49 505 2.25e-14 75.5
Msa0753500 MtrunA17_Chr4g0058261 21.945 401 269 14 79 444 107 498 3.10e-14 75.1
Msa0753500 MtrunA17_Chr3g0101621 20.343 467 321 15 9 444 12 458 3.39e-14 74.7
Msa0753500 MtrunA17_Chr3g0116741 27.143 210 142 5 246 449 283 487 4.18e-14 74.7
Msa0753500 MtrunA17_Chr2g0314721 25.652 230 160 4 236 460 268 491 4.20e-14 74.3
Msa0753500 MtrunA17_Chr1g0197881 20.601 466 325 15 9 444 11 461 4.58e-14 74.3
Msa0753500 MtrunA17_Chr1g0197891 20.638 470 328 16 7 444 6 462 6.25e-14 73.9
Msa0753500 MtrunA17_Chr7g0265611 25.000 228 155 6 227 443 261 483 7.02e-14 73.9
Msa0753500 MtrunA17_Chr3g0101581 21.684 475 329 17 6 450 14 475 8.65e-14 73.6
Msa0753500 MtrunA17_Chr5g0446161 19.833 479 332 15 1 444 6 467 9.12e-14 73.6
Msa0753500 MtrunA17_Chr7g0224551 20.949 506 336 17 2 460 8 496 1.40e-13 72.8
Msa0753500 MtrunA17_Chr7g0224561 20.751 506 337 17 2 460 8 496 1.67e-13 72.8
Msa0753500 MtrunA17_Chr3g0089371 28.387 155 102 5 30 178 39 190 1.77e-13 69.7
Msa0753500 MtrunA17_Chr1g0161641 38.462 78 46 1 365 442 13 88 2.04e-13 65.9
Msa0753500 MtrunA17_Chr2g0314781 28.571 168 113 4 296 460 4 167 2.51e-13 68.2
Msa0753500 MtrunA17_Chr3g0082701 26.316 228 147 8 233 446 280 500 2.89e-13 72.0
Msa0753500 MtrunA17_Chr4g0058211 26.111 180 122 4 271 443 9 184 3.53e-13 68.9
Msa0753500 MtrunA17_Chr4g0035921 20.850 494 310 21 3 443 14 479 7.55e-13 70.5
Msa0753500 MtrunA17_Chr3g0135841 20.441 499 324 14 8 444 19 506 1.09e-12 70.1
Msa0753500 MtrunA17_Chr1g0163421 21.928 529 327 24 3 470 37 540 1.14e-12 70.1
Msa0753500 MtrunA17_Chr5g0430101 22.321 448 297 17 26 436 31 464 1.17e-12 70.1
Msa0753500 MtrunA17_Chr1g0167321 20.507 473 331 14 31 472 34 492 1.22e-12 70.1
Msa0753500 MtrunA17_Chr1g0161651 22.623 305 185 8 15 271 27 328 1.34e-12 68.9
Msa0753500 MtrunA17_Chr5g0430031 21.895 475 286 21 23 444 29 471 2.37e-12 68.9
Msa0753500 MtrunA17_Chr8g0351421 24.803 254 173 6 211 448 234 485 3.16e-12 68.6
Msa0753500 MtrunA17_Chr7g0248991 24.080 299 185 8 144 410 77 365 4.48e-12 67.4
Msa0753500 MtrunA17_Chr7g0254641 21.677 489 310 19 15 450 19 487 5.87e-12 67.8
Msa0753500 MtrunA17_Chr3g0086651 25.703 249 161 5 222 450 235 479 6.87e-12 67.8
Msa0753500 MtrunA17_Chr1g0210091 21.749 446 282 17 67 470 97 517 7.92e-12 67.4
Msa0753500 MtrunA17_Chr4g0004481 23.203 487 316 22 1 448 1 468 8.57e-12 67.4
Msa0753500 MtrunA17_Chr8g0351401 24.783 230 155 6 232 444 253 481 1.07e-11 67.0
Msa0753500 MtrunA17_Chr4g0053621 21.501 493 323 18 3 456 9 476 1.15e-11 67.0
Msa0753500 MtrunA17_Chr4g0063221 22.824 425 292 11 50 444 73 491 1.15e-11 67.0
Msa0753500 MtrunA17_Chr1g0163451 22.075 530 325 23 3 470 21 524 1.24e-11 67.0
Msa0753500 MtrunA17_Chr6g0466941 24.896 241 160 8 233 458 271 505 1.63e-11 66.6
Msa0753500 MtrunA17_Chr7g0218601 24.107 224 158 5 230 448 254 470 1.79e-11 66.2
Msa0753500 MtrunA17_Chr8g0355961 22.650 468 301 19 24 451 34 480 2.00e-11 66.2
Msa0753500 MtrunA17_Chr4g0039391 25.101 247 169 6 223 457 240 482 2.27e-11 65.9
Msa0753500 MtrunA17_Chr7g0227281 20.506 395 284 10 106 470 100 494 2.52e-11 65.9
Msa0753500 MtrunA17_Chr8g0362701 20.665 421 295 11 66 451 65 481 5.16e-11 64.7
Msa0753500 MtrunA17_Chr1g0205371 21.130 478 324 17 1 444 7 465 7.50e-11 64.3
Msa0753500 MtrunA17_Chr8g0373431 35.385 65 42 0 406 470 2 66 8.16e-11 57.8
Msa0753500 MtrunA17_Chr8g0390881 20.958 501 311 19 21 465 26 497 9.18e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0753500 AT1G12740.1 74.468 470 120 0 1 470 1 470 0.0 755
Msa0753500 AT1G12740.2 73.739 476 119 1 1 470 1 476 0.0 749
Msa0753500 AT1G12740.4 73.529 476 120 1 1 470 1 476 0.0 749
Msa0753500 AT1G12740.3 73.901 364 95 0 1 364 1 364 0.0 570
Msa0753500 AT1G78490.1 40.717 474 277 4 3 473 7 479 1.71e-132 392
Msa0753500 AT5G48000.2 41.794 457 262 4 16 469 20 475 6.01e-132 390
Msa0753500 AT5G48000.4 41.794 457 262 4 16 469 20 475 6.01e-132 390
Msa0753500 AT5G48000.7 41.794 457 262 4 16 469 20 475 6.01e-132 390
Msa0753500 AT5G48000.6 41.794 457 262 4 16 469 20 475 6.01e-132 390
Msa0753500 AT5G48000.5 41.794 457 262 4 16 469 20 475 6.01e-132 390
Msa0753500 AT5G48000.3 41.794 457 262 4 16 469 20 475 6.01e-132 390
Msa0753500 AT5G48000.1 41.794 457 262 4 16 469 61 516 5.54e-131 389
Msa0753500 AT1G55940.2 40.833 480 272 8 1 469 13 491 1.04e-129 386
Msa0753500 AT1G55940.1 41.372 452 253 8 1 441 13 463 3.35e-124 370
Msa0753500 AT3G44970.1 38.397 474 283 6 7 473 8 479 7.75e-116 349
Msa0753500 AT1G78490.2 41.000 400 232 4 3 399 7 405 7.78e-110 332
Msa0753500 AT4G15300.3 36.087 460 286 6 15 472 9 462 1.19e-104 320
Msa0753500 AT4G15300.2 36.087 460 286 6 15 472 19 472 1.42e-104 320
Msa0753500 AT4G15310.1 35.565 478 296 9 1 472 4 475 3.41e-101 311
Msa0753500 AT1G65670.1 35.084 476 295 8 6 477 8 473 5.11e-98 304
Msa0753500 AT4G15393.2 34.534 472 292 11 2 468 8 467 3.74e-96 298
Msa0753500 AT3G50660.1 34.576 483 276 8 23 468 31 510 5.07e-96 300
Msa0753500 AT4G15396.1 34.783 460 289 8 19 474 23 475 7.90e-96 298
Msa0753500 AT4G15300.1 34.232 482 287 8 15 472 9 484 9.50e-96 298
Msa0753500 AT5G05690.1 35.214 443 281 5 31 471 31 469 6.45e-94 293
Msa0753500 AT4G15396.3 34.228 447 279 10 2 443 8 444 3.51e-91 285
Msa0753500 AT3G30180.1 33.121 471 298 8 3 468 5 463 1.29e-87 276
Msa0753500 AT3G19270.2 32.071 449 296 5 1 449 4 443 4.60e-87 275
Msa0753500 AT3G19270.1 31.603 443 295 4 1 443 4 438 6.84e-85 268
Msa0753500 AT4G15396.2 31.590 478 291 10 2 474 8 454 1.39e-83 265
Msa0753500 AT1G73340.1 32.667 450 285 6 30 471 42 481 1.19e-82 264
Msa0753500 AT4G36380.1 32.366 448 295 5 31 472 69 514 1.47e-82 265
Msa0753500 AT5G38970.1 31.423 471 306 8 3 468 5 463 1.84e-81 260
Msa0753500 AT3G50660.2 35.396 404 231 7 23 399 31 431 3.22e-80 256
Msa0753500 AT3G13730.1 33.100 429 267 6 26 443 46 465 2.23e-79 256
Msa0753500 AT5G05690.2 35.484 372 235 4 31 401 31 398 4.64e-79 252
Msa0753500 AT3G13730.2 33.019 424 264 6 30 442 50 464 6.51e-78 251
Msa0753500 AT4G15393.1 33.085 402 254 9 2 399 8 398 1.24e-77 248
Msa0753500 AT4G15396.4 33.333 402 255 8 2 399 8 400 2.80e-77 248
Msa0753500 AT5G45340.1 29.810 473 313 10 1 470 6 462 2.15e-75 244
Msa0753500 AT5G45340.2 30.310 452 297 9 1 450 6 441 4.84e-74 240
Msa0753500 AT4G15393.3 31.841 402 226 8 2 399 8 365 8.95e-72 232
Msa0753500 AT5G14400.2 31.293 441 266 10 36 467 1 413 1.54e-71 233
Msa0753500 AT5G14400.3 31.894 417 247 10 36 443 1 389 5.94e-69 225
Msa0753500 AT3G30290.1 32.847 411 265 9 71 478 5 407 3.61e-68 224
Msa0753500 AT4G19230.1 28.894 443 300 7 31 472 36 464 4.54e-68 225
Msa0753500 AT4G19230.2 30.024 413 275 6 31 443 36 434 2.53e-66 221
Msa0753500 AT5G38970.2 31.008 387 258 5 85 468 2 382 9.52e-65 214
Msa0753500 AT5G38970.4 31.008 387 258 5 85 468 2 382 9.52e-65 214
Msa0753500 AT5G05690.3 33.898 354 228 5 120 471 1 350 1.85e-64 213
Msa0753500 AT5G38970.3 29.953 424 280 8 3 421 5 416 2.89e-64 214
Msa0753500 AT2G29090.2 28.241 432 297 7 17 446 37 457 3.38e-64 216
Msa0753500 AT2G29090.1 28.241 432 297 7 17 446 37 457 3.38e-64 216
Msa0753500 AT2G32440.2 28.132 455 309 9 1 442 9 458 1.56e-63 214
Msa0753500 AT2G32440.1 28.132 455 309 9 1 442 9 458 1.56e-63 214
Msa0753500 AT3G44970.2 36.310 336 205 6 7 335 8 341 1.84e-63 211
Msa0753500 AT1G19630.1 28.859 447 309 6 3 446 9 449 6.71e-63 212
Msa0753500 AT1G19630.3 28.829 444 307 6 3 443 9 446 1.30e-61 208
Msa0753500 AT5G36110.1 28.910 422 289 7 31 446 34 450 1.14e-60 206
Msa0753500 AT1G05160.2 26.622 447 315 7 5 442 19 461 4.06e-58 200
Msa0753500 AT1G05160.1 26.622 447 315 7 5 442 19 461 4.06e-58 200
Msa0753500 AT2G42850.1 28.634 454 295 12 31 470 45 483 9.03e-56 193
Msa0753500 AT4G36380.2 32.153 339 224 3 31 364 69 406 1.37e-55 191
Msa0753500 AT5G14400.4 31.361 338 215 8 36 364 1 330 2.82e-52 180
Msa0753500 AT5G14400.1 29.275 386 236 10 91 467 2 359 1.59e-51 179
Msa0753500 AT1G19630.2 27.228 404 288 5 3 403 9 409 4.33e-50 177
Msa0753500 AT2G29090.3 26.575 365 261 5 84 446 3 362 2.97e-47 168
Msa0753500 AT5G36110.2 27.507 349 244 6 31 373 34 379 1.59e-40 150
Msa0753500 AT2G42850.2 26.966 356 235 9 31 373 45 388 3.08e-35 135
Msa0753500 AT2G29090.4 26.027 292 206 5 17 306 37 320 5.37e-31 123
Msa0753500 AT5G36140.1 26.056 284 199 6 31 308 33 311 4.42e-30 119
Msa0753500 AT4G13310.1 24.342 456 296 17 23 444 24 464 8.08e-23 101
Msa0753500 AT5G36130.1 33.333 138 88 2 332 467 1 136 5.93e-22 92.0
Msa0753500 AT5G06905.1 20.482 498 331 13 19 468 19 499 6.63e-21 95.9
Msa0753500 AT5G06900.1 24.211 475 305 20 3 442 12 466 1.93e-20 94.7
Msa0753500 AT1G31800.1 21.053 437 296 11 67 469 139 560 2.01e-20 94.7
Msa0753500 AT4G13290.1 24.783 460 281 21 23 444 25 457 1.32e-19 92.0
Msa0753500 AT4G37410.1 21.505 465 303 13 31 456 30 471 2.07e-19 91.3
Msa0753500 AT3G26310.1 26.482 253 165 6 222 457 233 481 4.62e-19 90.1
Msa0753500 AT3G26300.1 20.683 498 318 16 1 451 4 471 5.01e-19 90.1
Msa0753500 AT4G37430.1 21.586 454 305 16 31 448 28 466 9.76e-19 89.4
Msa0753500 AT2G45550.1 21.748 469 323 13 10 444 16 474 4.24e-18 87.4
Msa0753500 AT2G27000.1 21.395 430 289 15 60 451 64 482 4.86e-18 87.0
Msa0753500 AT3G20110.1 23.415 410 285 12 66 451 70 474 1.25e-17 85.9
Msa0753500 AT5G04630.1 22.385 478 327 16 2 443 7 476 1.84e-17 85.5
Msa0753500 AT3G20140.1 21.681 452 310 14 31 451 42 480 1.84e-17 85.5
Msa0753500 AT5G25140.1 21.634 453 303 12 31 448 29 464 3.77e-17 84.3
Msa0753500 AT5G57220.1 22.521 484 329 17 2 457 3 468 6.12e-17 83.6
Msa0753500 AT4G13770.1 22.432 477 326 19 1 444 1 466 6.64e-17 83.6
Msa0753500 AT5G24950.1 23.991 446 293 18 31 444 32 463 7.64e-17 83.6
Msa0753500 AT5G44620.1 22.297 444 282 16 65 470 75 493 1.02e-16 83.2
Msa0753500 AT3G10560.1 22.128 470 327 16 4 443 20 480 1.94e-16 82.4
Msa0753500 AT2G34500.1 23.041 434 278 15 75 473 78 490 2.13e-16 82.0
Msa0753500 AT5G07990.1 22.428 486 324 17 1 449 4 473 2.35e-16 82.0
Msa0753500 AT5G25120.1 25.943 212 146 4 247 451 260 467 2.38e-16 82.0
Msa0753500 AT3G20950.1 20.954 482 338 16 3 451 17 488 2.39e-16 82.0
Msa0753500 AT5G25180.1 21.930 456 304 12 31 451 29 467 3.62e-16 81.3
Msa0753500 AT4G15110.1 24.211 380 212 14 125 441 180 546 6.49e-16 80.9
Msa0753500 AT1G66540.2 24.583 240 155 5 227 456 75 298 7.86e-16 79.0
Msa0753500 AT4G37340.1 22.944 231 170 3 227 456 247 470 1.57e-15 79.3
Msa0753500 AT1G66540.1 24.583 240 155 5 227 456 134 357 1.99e-15 78.6
Msa0753500 AT5G10610.1 23.246 456 313 16 26 455 27 471 2.26e-15 79.0
Msa0753500 AT3G48310.1 23.448 435 288 15 38 444 39 456 2.70e-15 78.6
Msa0753500 AT4G37320.1 22.346 358 244 10 100 456 146 470 2.99e-15 78.6
Msa0753500 AT1G50520.1 20.991 424 282 14 61 443 69 480 4.19e-15 78.2
Msa0753500 AT4G31500.1 22.052 458 302 16 30 448 28 469 4.89e-15 77.8
Msa0753500 AT2G34490.1 21.495 428 290 17 75 470 79 492 4.98e-15 77.8
Msa0753500 AT3G20100.1 20.976 410 288 12 67 444 73 478 8.80e-15 77.0
Msa0753500 AT5G25130.1 26.500 200 136 4 259 451 272 467 9.62e-15 77.0
Msa0753500 AT3G48280.1 22.022 445 301 16 29 444 28 455 9.63e-15 77.0
Msa0753500 AT3G28740.1 22.096 353 244 10 117 447 126 469 1.05e-14 77.0
Msa0753500 AT5G42590.1 23.695 498 322 19 4 465 9 484 1.18e-14 76.6
Msa0753500 AT4G20240.1 25.253 396 260 13 30 400 32 416 1.50e-14 76.3
Msa0753500 AT5G67310.1 23.819 487 294 19 1 443 15 468 2.22e-14 75.9
Msa0753500 AT4G13310.2 24.011 379 242 15 23 370 24 387 6.88e-14 73.6
Msa0753500 AT3G53130.1 27.184 206 138 6 272 470 339 539 8.46e-14 73.9
Msa0753500 AT4G15380.1 20.930 430 271 12 61 444 68 474 9.65e-14 73.9
Msa0753500 AT2G40890.1 21.298 493 330 16 3 457 8 480 1.37e-13 73.2
Msa0753500 AT5G24960.1 23.831 449 306 14 23 444 25 464 1.42e-13 73.2
Msa0753500 AT4G15350.1 20.574 418 295 12 66 451 66 478 1.50e-13 73.2
Msa0753500 AT3G20940.1 20.088 453 321 14 31 451 42 485 1.53e-13 73.2
Msa0753500 AT3G26160.1 26.000 200 137 5 231 422 250 446 1.91e-13 72.8
Msa0753500 AT5G10600.1 22.541 488 330 19 1 458 21 490 1.95e-13 72.8
Msa0753500 AT3G20130.1 20.673 416 295 13 60 444 67 478 2.29e-13 72.8
Msa0753500 AT3G48270.1 22.197 437 301 17 33 444 33 455 2.57e-13 72.4
Msa0753500 AT2G45560.1 21.099 455 308 15 31 448 38 478 3.66e-13 72.0
Msa0753500 AT1G13090.2 22.757 457 290 20 30 443 27 463 3.97e-13 72.0
Msa0753500 AT3G48320.1 22.581 434 293 15 38 444 39 456 3.97e-13 72.0
Msa0753500 AT4G37330.1 19.883 342 237 8 106 446 152 457 4.94e-13 71.6
Msa0753500 AT2G23180.1 26.442 208 142 5 272 470 307 512 5.54e-13 71.6
Msa0753500 AT1G33730.1 23.500 200 146 3 248 444 143 338 8.08e-13 70.1
Msa0753500 AT1G33730.2 23.500 200 146 3 248 444 143 338 8.08e-13 70.1
Msa0753500 AT2G25160.1 23.368 475 301 20 12 436 17 478 1.11e-12 70.5
Msa0753500 AT4G37400.1 21.615 421 296 14 65 457 60 474 1.14e-12 70.5
Msa0753500 AT1G13110.1 20.041 484 342 14 3 451 4 477 1.16e-12 70.5
Msa0753500 AT5G04330.1 22.500 480 307 17 32 463 33 495 1.36e-12 70.1
Msa0753500 AT1G28430.1 21.510 437 295 15 61 459 66 492 1.44e-12 70.1
Msa0753500 AT2G27010.1 20.379 422 297 14 60 456 60 467 1.64e-12 70.1
Msa0753500 AT5G36220.2 21.973 223 163 5 230 451 111 323 2.45e-12 68.6
Msa0753500 AT5G24910.1 25.806 217 142 7 237 441 292 501 2.70e-12 69.3
Msa0753500 AT1G74550.1 21.412 425 283 13 67 457 58 465 2.84e-12 69.3
Msa0753500 AT3G26330.1 25.490 255 167 8 222 458 234 483 2.89e-12 69.3
Msa0753500 AT4G20240.2 25.135 370 242 12 30 375 32 390 4.01e-12 68.2
Msa0753500 AT1G11680.1 21.018 452 320 13 8 437 15 451 4.16e-12 68.6
Msa0753500 AT1G64900.1 21.212 462 313 15 38 459 38 488 5.53e-12 68.2
Msa0753500 AT4G37360.1 23.849 239 172 4 227 462 247 478 7.42e-12 67.8
Msa0753500 AT1G13100.1 27.397 219 137 7 233 433 246 460 8.31e-12 67.8
Msa0753500 AT3G20090.2 19.953 426 299 16 60 451 68 485 1.25e-11 67.4
Msa0753500 AT2G28860.1 18.868 424 302 14 75 470 79 488 1.28e-11 67.0
Msa0753500 AT5G38450.1 22.716 405 275 14 65 441 91 485 1.33e-11 67.0
Msa0753500 AT2G26710.1 22.857 420 287 14 48 441 76 484 3.33e-11 65.9
Msa0753500 AT2G45570.1 19.613 413 295 10 65 444 67 475 3.65e-11 65.9
Msa0753500 AT4G22710.1 19.417 412 299 13 66 448 84 491 3.68e-11 65.9
Msa0753500 AT3G25180.1 20.186 431 303 14 65 460 70 494 6.91e-11 64.7
Msa0753500 AT3G03470.1 21.353 473 320 16 30 459 30 493 8.26e-11 64.7
Msa0753500 AT2G14100.1 19.613 413 299 12 61 444 69 477 8.58e-11 64.7

Find 141 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTGCTTCCACTAGATTTA+AGG 0.122334 5_2:-7140218 Msa0753500:three_prime_UTR
CCGAGTCCTCCGAGAATTTA+AGG 0.150911 5_2:-7142091 Msa0753500:CDS
GATACATTCACAGAGATATT+TGG 0.163237 5_2:-7142452 Msa0753500:CDS
ATCAATGACATTTACATTTC+AGG 0.168011 5_2:-7141370 Msa0753500:intron
ACCAAACATTTCCTGGCTTT+TGG 0.233382 5_2:-7140717 Msa0753500:CDS
ACTGAAGGCTCTCACCTAAA+AGG 0.242119 5_2:+7142898 None:intergenic
CTACCATGAGTCTTCCTTGC+AGG 0.258172 5_2:+7140362 None:intergenic
TGGCTTCTCAGGGTAGAAAA+AGG 0.296392 5_2:-7141800 Msa0753500:intron
TTTGATCTTTCTCTGTGATC+TGG 0.305430 5_2:+7140429 None:intergenic
AACAATATTCCCTCCTTTGA+TGG 0.311079 5_2:+7140490 None:intergenic
AATATCTCTGTGAATGTATC+TGG 0.320683 5_2:+7142455 None:intergenic
AGTGCCTTCCGGAAGATTCC+TGG 0.327774 5_2:+7141222 None:intergenic
TTCATTCTCTTCTTGATGAA+TGG 0.341050 5_2:+7142843 None:intergenic
ATACATTCACAGAGATATTT+GGG 0.355848 5_2:-7142451 Msa0753500:CDS
AAATCCTTCTGTTGTTTCCT+AGG 0.357079 5_2:+7141732 None:intergenic
TGGTGCTACCAAACATTTCC+TGG 0.362057 5_2:-7140724 Msa0753500:CDS
AACATGATGCTCAATTTGTT+TGG 0.363635 5_2:-7142380 Msa0753500:CDS
ACCAAGTTTGTCTTGAAGAT+TGG 0.370600 5_2:+7142563 None:intergenic
ATAATACTACTAAAGGGAAA+TGG 0.374119 5_2:-7140194 Msa0753500:three_prime_UTR
ATTTGCAAGTCTCGCAGTTT+CGG 0.376972 5_2:+7141251 None:intergenic
TTACACGTTGGGTTTATAGA+TGG 0.377880 5_2:-7142971 Msa0753500:CDS
TGCTAAACGCACCTCCCATC+TGG 0.378101 5_2:+7140938 None:intergenic
TGCCATGTGACTCCAGAGTT+AGG 0.381381 5_2:+7141402 None:intergenic
AAAGTTCTCCCTTAAATTCT+CGG 0.385746 5_2:+7142082 None:intergenic
AGCTTATAACAAATGTTTGC+AGG 0.388693 5_2:-7142009 Msa0753500:intron
CATTTGTTATAAGCTGTTCC+TGG 0.389618 5_2:+7142017 None:intergenic
TTTGAACCCTGCGAAATATC+AGG 0.389672 5_2:-7140982 Msa0753500:CDS
AATTGAGCATCATGTTCTTA+AGG 0.390570 5_2:+7142387 None:intergenic
CTGAAGGCTCTCACCTAAAA+GGG 0.394233 5_2:+7142899 None:intergenic
TCATTCCCTCTCAACATTCC+AGG 0.394399 5_2:-7142035 Msa0753500:CDS
GGGAATATTGTTCGAACTCC+TGG 0.399698 5_2:-7140479 Msa0753500:CDS
TAATTTCCCTTAGTGCCTTC+CGG 0.411050 5_2:+7141211 None:intergenic
CCTTAAATTCTCGGAGGACT+CGG 0.426734 5_2:+7142091 None:intergenic
CAAAATGTAGGTTCCTTACA+TGG 0.428064 5_2:-7142425 Msa0753500:CDS
AGACTTGCAAATATAGTTCC+AGG 0.431096 5_2:-7141240 Msa0753500:CDS
TTAAGGTATAATACTACTAA+AGG 0.431940 5_2:-7140201 Msa0753500:three_prime_UTR
ATATAGTTCCAGGAATCTTC+CGG 0.432579 5_2:-7141230 Msa0753500:CDS
ATTGTCAGAGAGTAATTTGA+TGG 0.434342 5_2:+7141584 None:intergenic
ATTGCTTGGTAACAAAGTAT+AGG 0.436931 5_2:-7140632 Msa0753500:intron
TAATACTACTAAAGGGAAAT+GGG 0.437438 5_2:-7140193 Msa0753500:three_prime_UTR
GTAATTTGATGGCATAAGTA+AGG 0.438483 5_2:+7141595 None:intergenic
ACCAAAAGCCAGGAAATGTT+TGG 0.440923 5_2:+7140716 None:intergenic
TAACTACTTCATATTCCAAC+AGG 0.445863 5_2:-7142504 Msa0753500:CDS
TAGGATTCTCACGTCGTTCA+AGG 0.447412 5_2:+7141421 None:intergenic
CTTATACATAAAACCATGTA+AGG 0.447459 5_2:+7142412 None:intergenic
ATCTGGACATGAAAGCCATT+TGG 0.457418 5_2:+7140446 None:intergenic
TATGTGCATTATTACACGTT+GGG 0.458676 5_2:-7142982 Msa0753500:CDS
GCAGGGTTCAAATGTACAGC+TGG 0.459923 5_2:+7140993 None:intergenic
GAATCTTCCGGAAGGCACTA+AGG 0.466533 5_2:-7141218 Msa0753500:CDS
AAGCTTCGAAACCACTTCTC+AGG 0.466680 5_2:-7141619 Msa0753500:CDS
AATATGAAGTAGTTAAGATC+AGG 0.468099 5_2:+7142512 None:intergenic
CCTGGTTTACAATTTCCAAA+TGG 0.471815 5_2:-7140461 Msa0753500:CDS
AGAACATGCTGCAGGAAAGA+AGG 0.477183 5_2:-7141761 Msa0753500:CDS
CGAGTCCTCCGAGAATTTAA+GGG 0.477211 5_2:-7142090 Msa0753500:CDS
AGGAATATCACAAGAAGTGT+TGG 0.485257 5_2:+7142866 None:intergenic
AGCCTGCAGAACATTACAAC+AGG 0.486587 5_2:-7142315 Msa0753500:CDS
ACCAGCAGGATGGGCAATCA+TGG 0.490842 5_2:-7141024 Msa0753500:CDS
GATTGCCCATCCTGCTGGTA+TGG 0.491364 5_2:+7141028 None:intergenic
CGCCTGTTGTAATGTTCTGC+AGG 0.492751 5_2:+7142313 None:intergenic
TAAGGTATAATACTACTAAA+GGG 0.493454 5_2:-7140200 Msa0753500:three_prime_UTR
ATTACAACAGGCGTCGTGTC+AGG 0.493459 5_2:-7142303 Msa0753500:CDS
AAACTACCACCAGGTACAAT+GGG 0.497164 5_2:-7142927 Msa0753500:CDS
ACAATATTCCCTCCTTTGAT+GGG 0.500084 5_2:+7140491 None:intergenic
GGGTCTGTGGACACTACAAC+TGG 0.501330 5_2:+7142533 None:intergenic
AACTTTGTTGCATTTATACA+AGG 0.506305 5_2:-7142065 Msa0753500:CDS
ACCATGATTGCCCATCCTGC+TGG 0.509227 5_2:+7141023 None:intergenic
TATTGAAGAACTTAGAAAAG+AGG 0.509615 5_2:-7141697 Msa0753500:CDS
CTAAAGGGAAATGGGCCAAG+GGG 0.516162 5_2:-7140185 Msa0753500:three_prime_UTR
AGAGGATCCTGATATTTCGC+AGG 0.516865 5_2:+7140975 None:intergenic
CCATTTGGAAATTGTAAACC+AGG 0.516872 5_2:+7140461 None:intergenic
GGAATATCACAAGAAGTGTT+GGG 0.519625 5_2:+7142867 None:intergenic
TCATGCCTCCACCAAAAGCC+AGG 0.525654 5_2:+7140706 None:intergenic
ACCAATCTTCAAGACAAACT+TGG 0.526479 5_2:-7142564 Msa0753500:CDS
ATTGAAGAACTTAGAAAAGA+GGG 0.526613 5_2:-7141696 Msa0753500:CDS
AAACGCACCTCCCATCTGGA+TGG 0.527002 5_2:+7140942 None:intergenic
CTTAACAGAAGCAATAGCTC+TGG 0.527040 5_2:-7141667 Msa0753500:CDS
AGAATTTGCCAAGGTTCAGA+TGG 0.528615 5_2:-7140667 Msa0753500:CDS
TCAGGACAGCGTCGAGCTGA+AGG 0.533043 5_2:-7142285 Msa0753500:CDS
CAGGGTTCAAATGTACAGCT+GGG 0.535877 5_2:+7140994 None:intergenic
AAATTCTCGGAGGACTCGGT+TGG 0.542724 5_2:+7142095 None:intergenic
TGTAATTGCTTGAACACCAA+GGG 0.542826 5_2:+7141561 None:intergenic
GGTAGTTTACCATTGCAACT+AGG 0.543466 5_2:+7142942 None:intergenic
ATTCTCTTCTTGATGAATGG+AGG 0.545192 5_2:+7142846 None:intergenic
ATCTTCAAGACAAACTTGGT+TGG 0.546380 5_2:-7142560 Msa0753500:CDS
ATGTATCTGGATACCAACTC+TGG 0.549088 5_2:+7142468 None:intergenic
GTATTATACCTTAAATCTAG+TGG 0.549370 5_2:+7140210 None:intergenic
TACTAAAGGGAAATGGGCCA+AGG 0.549494 5_2:-7140187 Msa0753500:three_prime_UTR
ATATTTGGGCAACAAAATGT+AGG 0.549555 5_2:-7142437 Msa0753500:CDS
AAGGGAAAATATTCCAGAGT+TGG 0.550551 5_2:-7142481 Msa0753500:CDS
TTGTCTTCAACCCATCCAGA+TGG 0.551692 5_2:-7140953 Msa0753500:CDS
ATATACCATACCAGCAGGAT+GGG 0.555489 5_2:-7141033 Msa0753500:CDS
TAAACTACCACCAGGTACAA+TGG 0.556385 5_2:-7142928 Msa0753500:CDS
GAACATGCTGCAGGAAAGAA+GGG 0.558252 5_2:-7141760 Msa0753500:CDS
ATTACTCTCTGACAATCCCT+TGG 0.558657 5_2:-7141577 Msa0753500:CDS
TTTAAAGTAAGAGTCTGTTA+CGG 0.564023 5_2:+7140253 None:intergenic
ACTAAAGGGAAATGGGCCAA+GGG 0.565428 5_2:-7140186 Msa0753500:three_prime_UTR
ATTCTCACGTCGTTCAAGGA+TGG 0.565772 5_2:+7141425 None:intergenic
TTCAGGTGGCGACCCATCAA+AGG 0.566577 5_2:-7140503 Msa0753500:intron
AATCTTCCGGAAGGCACTAA+GGG 0.567870 5_2:-7141217 Msa0753500:CDS
TGGAGAAATCCTAGTTGCAA+TGG 0.573060 5_2:-7142951 Msa0753500:CDS
TCATCAAGAAGAGAATGAAA+AGG 0.575267 5_2:-7142839 Msa0753500:intron
CGACGTGAGAATCCTAACTC+TGG 0.577850 5_2:-7141414 Msa0753500:CDS
TGTCTTCAACCCATCCAGAT+GGG 0.579182 5_2:-7140952 Msa0753500:CDS
GCTGAAGGAAGCAACAGAAA+CGG 0.582765 5_2:-7142270 Msa0753500:intron
CTGTTCCTGGAATGTTGAGA+GGG 0.583184 5_2:+7142030 None:intergenic
AGGGGTAATCCCATTGTACC+TGG 0.583857 5_2:+7142918 None:intergenic
GATGCTTAAGAACATGCTGC+AGG 0.584027 5_2:-7141769 Msa0753500:CDS
AACGCACCTCCCATCTGGAT+GGG 0.588199 5_2:+7140943 None:intergenic
GATATACCATACCAGCAGGA+TGG 0.594840 5_2:-7141034 Msa0753500:CDS
GTAGTTAAGATCAGGGTCTG+TGG 0.595135 5_2:+7142520 None:intergenic
TAATTTGATGGCATAAGTAA+GGG 0.595541 5_2:+7141596 None:intergenic
AAATGTTTGGTAGCACCACT+CGG 0.596149 5_2:+7140729 None:intergenic
AGGAAAGAAGGGAAATGCCT+AGG 0.597147 5_2:-7141749 Msa0753500:CDS
ATAAGTAAGGGCCTGAGAAG+TGG 0.597216 5_2:+7141608 None:intergenic
CTGGATGGGTTGAAGACAAG+AGG 0.599247 5_2:+7140957 None:intergenic
GCAGGATATACCATACCAGC+AGG 0.600527 5_2:-7141038 Msa0753500:intron
AGGTGGCGACCCATCAAAGG+AGG 0.605955 5_2:-7140500 Msa0753500:CDS
GAGGATCCTGATATTTCGCA+GGG 0.613931 5_2:+7140976 None:intergenic
TGTTGGGACAGAATTTGCCA+AGG 0.619174 5_2:-7140676 Msa0753500:CDS
GCTGTTCCTGGAATGTTGAG+AGG 0.622568 5_2:+7142029 None:intergenic
TACTTCATATTCCAACAGGA+AGG 0.624124 5_2:-7142500 Msa0753500:CDS
ACTTCATATTCCAACAGGAA+GGG 0.625650 5_2:-7142499 Msa0753500:CDS
ATATGAAGTAGTTAAGATCA+GGG 0.631648 5_2:+7142513 None:intergenic
AGGGTTCAAATGTACAGCTG+GGG 0.636970 5_2:+7140995 None:intergenic
AAACCTGCAAGGAAGACTCA+TGG 0.642169 5_2:-7140365 Msa0753500:three_prime_UTR
CTATGTGCATTATTACACGT+TGG 0.643076 5_2:-7142983 Msa0753500:CDS
TAAAGGGAAATGGGCCAAGG+GGG 0.644404 5_2:-7140184 Msa0753500:three_prime_UTR
GGGTTCAAATGTACAGCTGG+GGG 0.646158 5_2:+7140996 None:intergenic
TTGTAATTGCTTGAACACCA+AGG 0.648842 5_2:+7141560 None:intergenic
TGCAATGGTAAACTACCACC+AGG 0.650281 5_2:-7142936 Msa0753500:CDS
ATTAGAACACAAAACCTGCA+AGG 0.652462 5_2:-7140376 Msa0753500:exon
CAAAGAGAAGCACAAACATG+AGG 0.652872 5_2:+7141643 None:intergenic
TGAAGGCTCTCACCTAAAAG+GGG 0.655464 5_2:+7142900 None:intergenic
ATCCTAACTCTGGAGTCACA+TGG 0.660807 5_2:-7141404 Msa0753500:CDS
AATGCCTAGGAAACAACAGA+AGG 0.670450 5_2:-7141736 Msa0753500:CDS
GGTGGCGACCCATCAAAGGA+GGG 0.671094 5_2:-7140499 Msa0753500:CDS
AGTTCCAGGAATCTTCCGGA+AGG 0.672126 5_2:-7141226 Msa0753500:CDS
CTTCAACCCATCCAGATGGG+AGG 0.674277 5_2:-7140949 Msa0753500:intron
GTTCTCCCTTAAATTCTCGG+AGG 0.689554 5_2:+7142085 None:intergenic
GGTAATCCCATTGTACCTGG+TGG 0.706713 5_2:+7142921 None:intergenic
CTACAGGGAATGGAACCGAG+TGG 0.755309 5_2:-7140744 Msa0753500:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATAAAAATTAGTACAC+TGG - chr5_2:7141225-7141244 Msa0753500:CDS 15.0%
!! TACGTTACAAATATATTATA+TGG - chr5_2:7141630-7141649 Msa0753500:CDS 15.0%
!!! TCTTTTGAACTATTTTTTTA+TGG - chr5_2:7141661-7141680 Msa0753500:CDS 15.0%
!!! AAATTTCTTCATTTTTAATG+TGG - chr5_2:7141828-7141847 Msa0753500:intron 15.0%
!!! AATTTCTTCATTTTTAATGT+GGG - chr5_2:7141829-7141848 Msa0753500:intron 15.0%
!!! TAATAATATCACAGTTTGTT+CGG - chr5_2:7140415-7140434 Msa0753500:CDS 20.0%
!! CAAAAACAAAAGGAATAATA+TGG - chr5_2:7140550-7140569 Msa0753500:intron 20.0%
!! TGATTATATATAGGAAAGAA+AGG + chr5_2:7141004-7141023 None:intergenic 20.0%
!! TCATCTGAATGATTATATAT+AGG + chr5_2:7141013-7141032 None:intergenic 20.0%
!!! AGGTAAGCATTTTATTAATA+AGG - chr5_2:7141177-7141196 Msa0753500:intron 20.0%
!!! GGTAAGCATTTTATTAATAA+GGG - chr5_2:7141178-7141197 Msa0753500:intron 20.0%
!!! ACAGCAATATTAATTTGTTT+TGG - chr5_2:7141346-7141365 Msa0753500:intron 20.0%
!!! AACTATTTTTTTATGGCTTT+AGG - chr5_2:7141668-7141687 Msa0753500:CDS 20.0%
!!! ACTAAGGGAAATTAATTTTA+AGG - chr5_2:7141964-7141983 Msa0753500:intron 20.0%
!!! CTAAGGGAAATTAATTTTAA+GGG - chr5_2:7141965-7141984 Msa0753500:intron 20.0%
!! ATCACAAAATTGTAAAAGAA+GGG + chr5_2:7142387-7142406 None:intergenic 20.0%
!! TTAAGGTATAATACTACTAA+AGG - chr5_2:7142965-7142984 Msa0753500:CDS 20.0%
!! TAAGGTATAATACTACTAAA+GGG - chr5_2:7142966-7142985 Msa0753500:CDS 20.0%
!! AATAATATCACAGTTTGTTC+GGG - chr5_2:7140416-7140435 Msa0753500:CDS 25.0%
! GATAACTTGAGTTCAAATTA+TGG - chr5_2:7140438-7140457 Msa0753500:CDS 25.0%
! ATATGAAGTAGTTAAGATCA+GGG + chr5_2:7140656-7140675 None:intergenic 25.0%
! AATATGAAGTAGTTAAGATC+AGG + chr5_2:7140657-7140676 None:intergenic 25.0%
! ATACATTCACAGAGATATTT+GGG - chr5_2:7140715-7140734 Msa0753500:CDS 25.0%
! CTTATACATAAAACCATGTA+AGG + chr5_2:7140757-7140776 None:intergenic 25.0%
!!! ATCATCTTTTTAAGACTTTC+AGG + chr5_2:7140813-7140832 None:intergenic 25.0%
! AACTTTGTTGCATTTATACA+AGG - chr5_2:7141101-7141120 Msa0753500:intron 25.0%
! ATAAAAATTAGTACACTGGT+TGG - chr5_2:7141229-7141248 Msa0753500:CDS 25.0%
! TATTGAAGAACTTAGAAAAG+AGG - chr5_2:7141469-7141488 Msa0753500:intron 25.0%
! ATTGAAGAACTTAGAAAAGA+GGG - chr5_2:7141470-7141489 Msa0753500:intron 25.0%
!! TAATTTGATGGCATAAGTAA+GGG + chr5_2:7141573-7141592 None:intergenic 25.0%
! ATCAATGACATTTACATTTC+AGG - chr5_2:7141796-7141815 Msa0753500:intron 25.0%
! ACTTGATGTTTAAGTAATAG+TGG - chr5_2:7142049-7142068 Msa0753500:CDS 25.0%
! TCATTATTGTAGACAAAATG+AGG + chr5_2:7142102-7142121 None:intergenic 25.0%
! GATCACAAAATTGTAAAAGA+AGG + chr5_2:7142388-7142407 None:intergenic 25.0%
!! TTTTGTGATCCAAAAAGAAA+TGG - chr5_2:7142398-7142417 Msa0753500:CDS 25.0%
! CTTTAACGTTTGAATATTTC+AGG - chr5_2:7142646-7142665 Msa0753500:intron 25.0%
!! TTTAAAGTAAGAGTCTGTTA+CGG + chr5_2:7142916-7142935 None:intergenic 25.0%
! GTATTATACCTTAAATCTAG+TGG + chr5_2:7142959-7142978 None:intergenic 25.0%
! ATAATACTACTAAAGGGAAA+TGG - chr5_2:7142972-7142991 Msa0753500:CDS 25.0%
! TAATACTACTAAAGGGAAAT+GGG - chr5_2:7142973-7142992 Msa0753500:CDS 25.0%
TATGTGCATTATTACACGTT+GGG - chr5_2:7140184-7140203 Msa0753500:three_prime_UTR 30.0%
TTCATTCTCTTCTTGATGAA+TGG + chr5_2:7140326-7140345 None:intergenic 30.0%
TCATCAAGAAGAGAATGAAA+AGG - chr5_2:7140327-7140346 Msa0753500:three_prime_UTR 30.0%
! TTGTTGTCTCTTTTCAGATA+TGG - chr5_2:7140579-7140598 Msa0753500:intron 30.0%
TAACTACTTCATATTCCAAC+AGG - chr5_2:7140662-7140681 Msa0753500:CDS 30.0%
AATATCTCTGTGAATGTATC+TGG + chr5_2:7140714-7140733 None:intergenic 30.0%
GATACATTCACAGAGATATT+TGG - chr5_2:7140714-7140733 Msa0753500:CDS 30.0%
ATATTTGGGCAACAAAATGT+AGG - chr5_2:7140729-7140748 Msa0753500:CDS 30.0%
AATTGAGCATCATGTTCTTA+AGG + chr5_2:7140782-7140801 None:intergenic 30.0%
! AACATGATGCTCAATTTGTT+TGG - chr5_2:7140786-7140805 Msa0753500:intron 30.0%
TCTTAAAAAGATGATCTCAG+AGG - chr5_2:7140818-7140837 Msa0753500:intron 30.0%
GAAGAAGGTTAAAATAGTAG+AGG + chr5_2:7140959-7140978 None:intergenic 30.0%
TTTAGACTTTAGACAAGGAA+TGG + chr5_2:7140981-7141000 None:intergenic 30.0%
AAAGGTTTAGACTTTAGACA+AGG + chr5_2:7140986-7141005 None:intergenic 30.0%
AAAGTTCTCCCTTAAATTCT+CGG + chr5_2:7141087-7141106 None:intergenic 30.0%
AGCTTATAACAAATGTTTGC+AGG - chr5_2:7141157-7141176 Msa0753500:intron 30.0%
!!! TTAATTTGTTTTGGCTTCTC+AGG - chr5_2:7141355-7141374 Msa0753500:intron 30.0%
!!! TAATTTGTTTTGGCTTCTCA+GGG - chr5_2:7141356-7141375 Msa0753500:intron 30.0%
! GTAATTTGATGGCATAAGTA+AGG + chr5_2:7141574-7141593 None:intergenic 30.0%
ATTGTCAGAGAGTAATTTGA+TGG + chr5_2:7141585-7141604 None:intergenic 30.0%
GAAAAGATGGAAAGAAAATG+AGG + chr5_2:7142262-7142281 None:intergenic 30.0%
! ATTGCTTGGTAACAAAGTAT+AGG - chr5_2:7142534-7142553 Msa0753500:CDS 30.0%
GTAATAAGCAATGTAATGCA+TGG - chr5_2:7142556-7142575 Msa0753500:CDS 30.0%
TTAAATTCAGGCGTTAAAGA+AGG + chr5_2:7142609-7142628 None:intergenic 30.0%
ACGCATTCTGAATTAAATTC+AGG + chr5_2:7142621-7142640 None:intergenic 30.0%
TAACGTTTGAATATTTCAGG+TGG - chr5_2:7142649-7142668 Msa0753500:intron 30.0%
CTATGTGCATTATTACACGT+TGG - chr5_2:7140183-7140202 Msa0753500:three_prime_UTR 35.0%
TTACACGTTGGGTTTATAGA+TGG - chr5_2:7140195-7140214 Msa0753500:three_prime_UTR 35.0%
TGTTGGGAGAAAAAAACTGA+AGG + chr5_2:7140286-7140305 None:intergenic 35.0%
!! GGAATATCACAAGAAGTGTT+GGG + chr5_2:7140302-7140321 None:intergenic 35.0%
! AGGAATATCACAAGAAGTGT+TGG + chr5_2:7140303-7140322 None:intergenic 35.0%
ATTCTCTTCTTGATGAATGG+AGG + chr5_2:7140323-7140342 None:intergenic 35.0%
TGGGCTAAGACAAAAACAAA+AGG - chr5_2:7140540-7140559 Msa0753500:intron 35.0%
ACCAATCTTCAAGACAAACT+TGG - chr5_2:7140602-7140621 Msa0753500:intron 35.0%
ACCAAGTTTGTCTTGAAGAT+TGG + chr5_2:7140606-7140625 None:intergenic 35.0%
ATCTTCAAGACAAACTTGGT+TGG - chr5_2:7140606-7140625 Msa0753500:intron 35.0%
TACTTCATATTCCAACAGGA+AGG - chr5_2:7140666-7140685 Msa0753500:CDS 35.0%
ACTTCATATTCCAACAGGAA+GGG - chr5_2:7140667-7140686 Msa0753500:CDS 35.0%
AAGGGAAAATATTCCAGAGT+TGG - chr5_2:7140685-7140704 Msa0753500:CDS 35.0%
CAAAATGTAGGTTCCTTACA+TGG - chr5_2:7140741-7140760 Msa0753500:CDS 35.0%
TTTAGACAAGGAATGGAAGA+AGG + chr5_2:7140974-7140993 None:intergenic 35.0%
!! CATTTGTTATAAGCTGTTCC+TGG + chr5_2:7141152-7141171 None:intergenic 35.0%
!! AAATCCTTCTGTTGTTTCCT+AGG + chr5_2:7141437-7141456 None:intergenic 35.0%
TGTAATTGCTTGAACACCAA+GGG + chr5_2:7141608-7141627 None:intergenic 35.0%
TTGTAATTGCTTGAACACCA+AGG + chr5_2:7141609-7141628 None:intergenic 35.0%
!!! GATGTCAATTTTGACTTCCT+CGG - chr5_2:7141690-7141709 Msa0753500:CDS 35.0%
CATGTTCTTCCTAAAAGACA+AGG + chr5_2:7141718-7141737 None:intergenic 35.0%
AGACTTGCAAATATAGTTCC+AGG - chr5_2:7141926-7141945 Msa0753500:intron 35.0%
ATATAGTTCCAGGAATCTTC+CGG - chr5_2:7141936-7141955 Msa0753500:intron 35.0%
GTTTCAATGTTCAAGTGCAT+TGG - chr5_2:7142024-7142043 Msa0753500:CDS 35.0%
!! AGCAACTAGCTTTGAAAAGA+TGG + chr5_2:7142275-7142294 None:intergenic 35.0%
TCCAAAAAGAAATGGTCTAC+AGG - chr5_2:7142406-7142425 Msa0753500:CDS 35.0%
CCAAAAAGAAATGGTCTACA+GGG - chr5_2:7142407-7142426 Msa0753500:CDS 35.0%
ACAATATTCCCTCCTTTGAT+GGG + chr5_2:7142678-7142697 None:intergenic 35.0%
AACAATATTCCCTCCTTTGA+TGG + chr5_2:7142679-7142698 None:intergenic 35.0%
CCATTTGGAAATTGTAAACC+AGG + chr5_2:7142708-7142727 None:intergenic 35.0%
CCTGGTTTACAATTTCCAAA+TGG - chr5_2:7142705-7142724 Msa0753500:intron 35.0%
TTTGATCTTTCTCTGTGATC+TGG + chr5_2:7142740-7142759 None:intergenic 35.0%
ATTAGAACACAAAACCTGCA+AGG - chr5_2:7142790-7142809 Msa0753500:intron 35.0%
TGGAGAAATCCTAGTTGCAA+TGG - chr5_2:7140215-7140234 Msa0753500:three_prime_UTR 40.0%
GGTAGTTTACCATTGCAACT+AGG + chr5_2:7140227-7140246 None:intergenic 40.0%
TAAACTACCACCAGGTACAA+TGG - chr5_2:7140238-7140257 Msa0753500:three_prime_UTR 40.0%
AAACTACCACCAGGTACAAT+GGG - chr5_2:7140239-7140258 Msa0753500:three_prime_UTR 40.0%
! ACAATGGGATTACCCCTTTT+AGG - chr5_2:7140254-7140273 Msa0753500:three_prime_UTR 40.0%
ATTATGGCTGAAGCAATCCT+TGG - chr5_2:7140454-7140473 Msa0753500:CDS 40.0%
GCCAGACTTTACTTACCTTT+CGG - chr5_2:7140476-7140495 Msa0753500:CDS 40.0%
!!! TTGTTTTTGTCTTAGCCCAC+CGG + chr5_2:7140539-7140558 None:intergenic 40.0%
! GGAATATTTTCCCTTCCTGT+TGG + chr5_2:7140680-7140699 None:intergenic 40.0%
ATGTATCTGGATACCAACTC+TGG + chr5_2:7140701-7140720 None:intergenic 40.0%
!!! GTTGGTTTTCTCAAGAAGTG+TGG - chr5_2:7141247-7141266 Msa0753500:CDS 40.0%
AATGCCTAGGAAACAACAGA+AGG - chr5_2:7141430-7141449 Msa0753500:CDS 40.0%
CTTAACAGAAGCAATAGCTC+TGG - chr5_2:7141499-7141518 Msa0753500:intron 40.0%
! CAAAGAGAAGCACAAACATG+AGG + chr5_2:7141526-7141545 None:intergenic 40.0%
ATTACTCTCTGACAATCCCT+TGG - chr5_2:7141589-7141608 Msa0753500:CDS 40.0%
ATTTGCAAGTCTCGCAGTTT+CGG + chr5_2:7141918-7141937 None:intergenic 40.0%
TAATTTCCCTTAGTGCCTTC+CGG + chr5_2:7141958-7141977 None:intergenic 40.0%
CTACAATAATGAACACGTGC+AGG - chr5_2:7142110-7142129 Msa0753500:CDS 40.0%
ATATACCATACCAGCAGGAT+GGG - chr5_2:7142133-7142152 Msa0753500:CDS 40.0%
TTTGAACCCTGCGAAATATC+AGG - chr5_2:7142184-7142203 Msa0753500:intron 40.0%
! CCCTGTAGACCATTTCTTTT+TGG + chr5_2:7142410-7142429 None:intergenic 40.0%
AAGAAATGGTCTACAGGGAA+TGG - chr5_2:7142412-7142431 Msa0753500:CDS 40.0%
! AAATGTTTGGTAGCACCACT+CGG + chr5_2:7142440-7142459 None:intergenic 40.0%
!! ACCAAACATTTCCTGGCTTT+TGG - chr5_2:7142449-7142468 Msa0753500:CDS 40.0%
ACCAAAAGCCAGGAAATGTT+TGG + chr5_2:7142453-7142472 None:intergenic 40.0%
!! AAACATTTCCTGGCTTTTGG+TGG - chr5_2:7142452-7142471 Msa0753500:CDS 40.0%
! GAGGCATGAGATTTTGTGTT+GGG - chr5_2:7142474-7142493 Msa0753500:CDS 40.0%
AGAATTTGCCAAGGTTCAGA+TGG - chr5_2:7142499-7142518 Msa0753500:CDS 40.0%
AAAAACTGCCATCTGAACCT+TGG + chr5_2:7142510-7142529 None:intergenic 40.0%
! GGCAGTTTTTCTTCATTGCT+TGG - chr5_2:7142520-7142539 Msa0753500:CDS 40.0%
ATCTGGACATGAAAGCCATT+TGG + chr5_2:7142723-7142742 None:intergenic 40.0%
!!! GTCTGTTACGGTTACTTTTG+AGG + chr5_2:7142904-7142923 None:intergenic 40.0%
CTGTGCTTCCACTAGATTTA+AGG - chr5_2:7142948-7142967 Msa0753500:CDS 40.0%
!! GGTTTTGTGTCTAGGAGCAT+TGG - chr5_2:7140157-7140176 Msa0753500:three_prime_UTR 45.0%
TGCAATGGTAAACTACCACC+AGG - chr5_2:7140230-7140249 Msa0753500:three_prime_UTR 45.0%
TGAAGGCTCTCACCTAAAAG+GGG + chr5_2:7140269-7140288 None:intergenic 45.0%
CTGAAGGCTCTCACCTAAAA+GGG + chr5_2:7140270-7140289 None:intergenic 45.0%
ACTGAAGGCTCTCACCTAAA+AGG + chr5_2:7140271-7140290 None:intergenic 45.0%
AGGTAAGTAAAGTCTGGCCA+AGG + chr5_2:7140474-7140493 None:intergenic 45.0%
GCCGAAAGGTAAGTAAAGTC+TGG + chr5_2:7140480-7140499 None:intergenic 45.0%
TAATCCAAAGTTCGGCCGAA+AGG + chr5_2:7140494-7140513 None:intergenic 45.0%
GTAGTTAAGATCAGGGTCTG+TGG + chr5_2:7140649-7140668 None:intergenic 45.0%
AGCCTGCAGAACATTACAAC+AGG - chr5_2:7140851-7140870 Msa0753500:intron 45.0%
GCTGAAGGAAGCAACAGAAA+CGG - chr5_2:7140896-7140915 Msa0753500:intron 45.0%
CCTTAAATTCTCGGAGGACT+CGG + chr5_2:7141078-7141097 None:intergenic 45.0%
CGAGTCCTCCGAGAATTTAA+GGG - chr5_2:7141076-7141095 Msa0753500:intron 45.0%
GTTCTCCCTTAAATTCTCGG+AGG + chr5_2:7141084-7141103 None:intergenic 45.0%
TCATTCCCTCTCAACATTCC+AGG - chr5_2:7141131-7141150 Msa0753500:intron 45.0%
CTGTTCCTGGAATGTTGAGA+GGG + chr5_2:7141139-7141158 None:intergenic 45.0%
TGGCTTCTCAGGGTAGAAAA+AGG - chr5_2:7141366-7141385 Msa0753500:intron 45.0%
GGCTTCTCAGGGTAGAAAAA+GGG - chr5_2:7141367-7141386 Msa0753500:intron 45.0%
GATGCTTAAGAACATGCTGC+AGG - chr5_2:7141397-7141416 Msa0753500:CDS 45.0%
AGAACATGCTGCAGGAAAGA+AGG - chr5_2:7141405-7141424 Msa0753500:CDS 45.0%
GAACATGCTGCAGGAAAGAA+GGG - chr5_2:7141406-7141425 Msa0753500:CDS 45.0%
AGGAAAGAAGGGAAATGCCT+AGG - chr5_2:7141417-7141436 Msa0753500:CDS 45.0%
AAGCTTCGAAACCACTTCTC+AGG - chr5_2:7141547-7141566 Msa0753500:intron 45.0%
ATAAGTAAGGGCCTGAGAAG+TGG + chr5_2:7141561-7141580 None:intergenic 45.0%
! TCCTCGGTACCTTGTCTTTT+AGG - chr5_2:7141706-7141725 Msa0753500:CDS 45.0%
!! TCCTAAAAGACAAGGTACCG+AGG + chr5_2:7141710-7141729 None:intergenic 45.0%
ATTCTCACGTCGTTCAAGGA+TGG + chr5_2:7141744-7141763 None:intergenic 45.0%
TAGGATTCTCACGTCGTTCA+AGG + chr5_2:7141748-7141767 None:intergenic 45.0%
!! ATCCTAACTCTGGAGTCACA+TGG - chr5_2:7141762-7141781 Msa0753500:CDS 45.0%
!! AATCTTCCGGAAGGCACTAA+GGG - chr5_2:7141949-7141968 Msa0753500:intron 45.0%
GATATACCATACCAGCAGGA+TGG - chr5_2:7142132-7142151 Msa0753500:CDS 45.0%
AGGGTTCAAATGTACAGCTG+GGG + chr5_2:7142174-7142193 None:intergenic 45.0%
CAGGGTTCAAATGTACAGCT+GGG + chr5_2:7142175-7142194 None:intergenic 45.0%
GAGGATCCTGATATTTCGCA+GGG + chr5_2:7142193-7142212 None:intergenic 45.0%
AGAGGATCCTGATATTTCGC+AGG + chr5_2:7142194-7142213 None:intergenic 45.0%
TTGTCTTCAACCCATCCAGA+TGG - chr5_2:7142213-7142232 Msa0753500:intron 45.0%
TGTCTTCAACCCATCCAGAT+GGG - chr5_2:7142214-7142233 Msa0753500:intron 45.0%
!! TGGTGCTACCAAACATTTCC+TGG - chr5_2:7142442-7142461 Msa0753500:CDS 45.0%
!! GGAGGCATGAGATTTTGTGT+TGG - chr5_2:7142473-7142492 Msa0753500:CDS 45.0%
TGTTGGGACAGAATTTGCCA+AGG - chr5_2:7142490-7142509 Msa0753500:CDS 45.0%
GGGAATATTGTTCGAACTCC+TGG - chr5_2:7142687-7142706 Msa0753500:intron 45.0%
AAACCTGCAAGGAAGACTCA+TGG - chr5_2:7142801-7142820 Msa0753500:intron 45.0%
TACTAAAGGGAAATGGGCCA+AGG - chr5_2:7142979-7142998 Msa0753500:CDS 45.0%
ACTAAAGGGAAATGGGCCAA+GGG - chr5_2:7142980-7142999 Msa0753500:CDS 45.0%
GGTAATCCCATTGTACCTGG+TGG + chr5_2:7140248-7140267 None:intergenic 50.0%
AGGGGTAATCCCATTGTACC+TGG + chr5_2:7140251-7140270 None:intergenic 50.0%
CTTACCTTTCGGCCGAACTT+TGG - chr5_2:7140487-7140506 Msa0753500:CDS 50.0%
GGCCGAACTTTGGATTACCA+GGG - chr5_2:7140497-7140516 Msa0753500:CDS 50.0%
GGCCCTGGTAATCCAAAGTT+CGG + chr5_2:7140502-7140521 None:intergenic 50.0%
CGCCTGTTGTAATGTTCTGC+AGG + chr5_2:7140856-7140875 None:intergenic 50.0%
! ATTACAACAGGCGTCGTGTC+AGG - chr5_2:7140863-7140882 Msa0753500:intron 50.0%
! AAATTCTCGGAGGACTCGGT+TGG + chr5_2:7141074-7141093 None:intergenic 50.0%
CCGAGTCCTCCGAGAATTTA+AGG - chr5_2:7141075-7141094 Msa0753500:intron 50.0%
GCTGTTCCTGGAATGTTGAG+AGG + chr5_2:7141140-7141159 None:intergenic 50.0%
CGACGTGAGAATCCTAACTC+TGG - chr5_2:7141752-7141771 Msa0753500:CDS 50.0%
TGCCATGTGACTCCAGAGTT+AGG + chr5_2:7141767-7141786 None:intergenic 50.0%
AGTTCCAGGAATCTTCCGGA+AGG - chr5_2:7141940-7141959 Msa0753500:intron 50.0%
!! GAATCTTCCGGAAGGCACTA+AGG - chr5_2:7141948-7141967 Msa0753500:intron 50.0%
GCAGGATATACCATACCAGC+AGG - chr5_2:7142128-7142147 Msa0753500:CDS 50.0%
GGGTTCAAATGTACAGCTGG+GGG + chr5_2:7142173-7142192 None:intergenic 50.0%
GCAGGGTTCAAATGTACAGC+TGG + chr5_2:7142176-7142195 None:intergenic 50.0%
!! CTGGATGGGTTGAAGACAAG+AGG + chr5_2:7142212-7142231 None:intergenic 50.0%
!! CATTTCCTGGCTTTTGGTGG+AGG - chr5_2:7142455-7142474 Msa0753500:CDS 50.0%
CTACCATGAGTCTTCCTTGC+AGG + chr5_2:7142807-7142826 None:intergenic 50.0%
CTAAAGGGAAATGGGCCAAG+GGG - chr5_2:7142981-7143000 Msa0753500:CDS 50.0%
TAAAGGGAAATGGGCCAAGG+GGG - chr5_2:7142982-7143001 Msa0753500:CDS 50.0%
CGGCCGAACTTTGGATTACC+AGG - chr5_2:7140496-7140515 Msa0753500:CDS 55.0%
TTACCAGGGCCTCATTCTCC+TGG - chr5_2:7140511-7140530 Msa0753500:intron 55.0%
CTCATTCTCCTGGAACCGGT+GGG - chr5_2:7140521-7140540 Msa0753500:intron 55.0%
GGGTCTGTGGACACTACAAC+TGG + chr5_2:7140636-7140655 None:intergenic 55.0%
AGTGCCTTCCGGAAGATTCC+TGG + chr5_2:7141947-7141966 None:intergenic 55.0%
GATTGCCCATCCTGCTGGTA+TGG + chr5_2:7142141-7142160 None:intergenic 55.0%
ACCAGCAGGATGGGCAATCA+TGG - chr5_2:7142142-7142161 Msa0753500:intron 55.0%
ACCATGATTGCCCATCCTGC+TGG + chr5_2:7142146-7142165 None:intergenic 55.0%
CTTCAACCCATCCAGATGGG+AGG - chr5_2:7142217-7142236 Msa0753500:intron 55.0%
AACGCACCTCCCATCTGGAT+GGG + chr5_2:7142226-7142245 None:intergenic 55.0%
AAACGCACCTCCCATCTGGA+TGG + chr5_2:7142227-7142246 None:intergenic 55.0%
TGCTAAACGCACCTCCCATC+TGG + chr5_2:7142231-7142250 None:intergenic 55.0%
CTACAGGGAATGGAACCGAG+TGG - chr5_2:7142422-7142441 Msa0753500:CDS 55.0%
TCATGCCTCCACCAAAAGCC+AGG + chr5_2:7142463-7142482 None:intergenic 55.0%
TTCAGGTGGCGACCCATCAA+AGG - chr5_2:7142663-7142682 Msa0753500:intron 55.0%
GTTCCAGGAGAATGAGGCCC+TGG + chr5_2:7140517-7140536 None:intergenic 60.0%
GGGCCTCATTCTCCTGGAAC+CGG - chr5_2:7140517-7140536 Msa0753500:intron 60.0%
!! CCACCGGTTCCAGGAGAATG+AGG + chr5_2:7140523-7140542 None:intergenic 60.0%
CCTCATTCTCCTGGAACCGG+TGG - chr5_2:7140520-7140539 Msa0753500:intron 60.0%
!! TGTCTTAGCCCACCGGTTCC+AGG + chr5_2:7140532-7140551 None:intergenic 60.0%
! TCAGGACAGCGTCGAGCTGA+AGG - chr5_2:7140881-7140900 Msa0753500:intron 60.0%
AGGTGGCGACCCATCAAAGG+AGG - chr5_2:7142666-7142685 Msa0753500:intron 60.0%
GGTGGCGACCCATCAAAGGA+GGG - chr5_2:7142667-7142686 Msa0753500:intron 60.0%
AATGGGCCAAGGGGGAAGTG+AGG - chr5_2:7142990-7143009 Msa0753500:CDS 60.0%
ATGGGCCAAGGGGGAAGTGA+GGG - chr5_2:7142991-7143010 Msa0753500:CDS 60.0%
TACCACCCTCACTTCCCCCT+TGG + chr5_2:7142999-7143018 None:intergenic 60.0%
GGCCAAGGGGGAAGTGAGGG+TGG - chr5_2:7142994-7143013 Msa0753500:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 7140152 7143036 7140152 ID=Msa0753500;Name=Msa0753500
chr5_2 mRNA 7140152 7143036 7140152 ID=Msa0753500-mRNA-1;Parent=Msa0753500;Name=Msa0753500-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.25|0.22|1|1|1|9|242|483
chr5_2 exon 7140152 7140520 7140152 ID=Msa0753500-mRNA-1:exon:3202;Parent=Msa0753500-mRNA-1
chr5_2 exon 7140633 7140760 7140633 ID=Msa0753500-mRNA-1:exon:3201;Parent=Msa0753500-mRNA-1
chr5_2 exon 7140950 7141056 7140950 ID=Msa0753500-mRNA-1:exon:3200;Parent=Msa0753500-mRNA-1
chr5_2 exon 7141202 7141280 7141202 ID=Msa0753500-mRNA-1:exon:3199;Parent=Msa0753500-mRNA-1
chr5_2 exon 7141371 7141460 7141371 ID=Msa0753500-mRNA-1:exon:3198;Parent=Msa0753500-mRNA-1
chr5_2 exon 7141560 7141811 7141560 ID=Msa0753500-mRNA-1:exon:3197;Parent=Msa0753500-mRNA-1
chr5_2 exon 7142010 7142159 7142010 ID=Msa0753500-mRNA-1:exon:3196;Parent=Msa0753500-mRNA-1
chr5_2 exon 7142271 7142592 7142271 ID=Msa0753500-mRNA-1:exon:3195;Parent=Msa0753500-mRNA-1
chr5_2 exon 7142840 7143036 7142840 ID=Msa0753500-mRNA-1:exon:3194;Parent=Msa0753500-mRNA-1
chr5_2 CDS 7142840 7143036 7142840 ID=Msa0753500-mRNA-1:cds;Parent=Msa0753500-mRNA-1
chr5_2 CDS 7142271 7142592 7142271 ID=Msa0753500-mRNA-1:cds;Parent=Msa0753500-mRNA-1
chr5_2 CDS 7142010 7142159 7142010 ID=Msa0753500-mRNA-1:cds;Parent=Msa0753500-mRNA-1
chr5_2 CDS 7141560 7141811 7141560 ID=Msa0753500-mRNA-1:cds;Parent=Msa0753500-mRNA-1
chr5_2 CDS 7141371 7141460 7141371 ID=Msa0753500-mRNA-1:cds;Parent=Msa0753500-mRNA-1
chr5_2 CDS 7141202 7141280 7141202 ID=Msa0753500-mRNA-1:cds;Parent=Msa0753500-mRNA-1
chr5_2 CDS 7140950 7141056 7140950 ID=Msa0753500-mRNA-1:cds;Parent=Msa0753500-mRNA-1
chr5_2 CDS 7140633 7140760 7140633 ID=Msa0753500-mRNA-1:cds;Parent=Msa0753500-mRNA-1
chr5_2 CDS 7140394 7140520 7140394 ID=Msa0753500-mRNA-1:cds;Parent=Msa0753500-mRNA-1
chr5_2 three_prime_UTR 7140152 7140393 7140152 ID=Msa0753500-mRNA-1:three_prime_utr;Parent=Msa0753500-mRNA-1
Gene Sequence

>Msa0753500

ATGTGGGTTTTGTGTCTAGGAGCATTGGTTACTATGTGCATTATTACACGTTGGGTTTATAGATGGAGAAATCCTAGTTGCAATGGTAAACTACCACCAGGTACAATGGGATTACCCCTTTTAGGTGAGAGCCTTCAGTTTTTTTCTCCCAACACTTCTTGTGATATTCCTCCATTCATCAAGAAGAGAATGAAAAGATATGGACCAATCTTCAAGACAAACTTGGTTGGAAGACCAGTTGTAGTGTCCACAGACCCTGATCTTAACTACTTCATATTCCAACAGGAAGGGAAAATATTCCAGAGTTGGTATCCAGATACATTCACAGAGATATTTGGGCAACAAAATGTAGGTTCCTTACATGGTTTTATGTATAAGTACCTTAAGAACATGATGCTCAATTTGTTTGGTCCTGAAAGTCTTAAAAAGATGATCTCAGAGGTTGAACAAGCAGCCTGCAGAACATTACAACAGGCGTCGTGTCAGGACAGCGTCGAGCTGAAGGAAGCAACAGAAACGATGATATTTGATTTGACTGCAAAAAAACTCATCAGTTATGATCCAACCGAGTCCTCCGAGAATTTAAGGGAGAACTTTGTTGCATTTATACAAGGACTCATCTCATTCCCTCTCAACATTCCAGGAACAGCTTATAACAAATGTTTGCAGGGTAGAAAAAGGGCAATGAAGATGCTTAAGAACATGCTGCAGGAAAGAAGGGAAATGCCTAGGAAACAACAGAAGGATTTCTTTGACTATGTTATTGAAGAACTTAGAAAAGAGGGAACGCTCTTAACAGAAGCAATAGCTCTGGACCTCATGTTTGTGCTTCTCTTTGCAAGCTTCGAAACCACTTCTCAGGCCCTTACTTATGCCATCAAATTACTCTCTGACAATCCCTTGGTGTTCAAGCAATTACAAGAAGAACATGAAGCCATCCTTGAACGACGTGAGAATCCTAACTCTGGAGTCACATGGCAAGAATATAAATCAATGACATTTACATTTCAGCTCATAACCGAAACTGCGAGACTTGCAAATATAGTTCCAGGAATCTTCCGGAAGGCACTAAGGGAAATTAATTTTAAGGGATATACCATACCAGCAGGATGGGCAATCATGGTGTGTCCCCCAGCTGTACATTTGAACCCTGCGAAATATCAGGATCCTCTTGTCTTCAACCCATCCAGATGGGAGGGAATGGAACCGAGTGGTGCTACCAAACATTTCCTGGCTTTTGGTGGAGGCATGAGATTTTGTGTTGGGACAGAATTTGCCAAGGTTCAGATGGCAGTTTTTCTTCATTGCTTGGTAACAAAGTATAGGTGGCGACCCATCAAAGGAGGGAATATTGTTCGAACTCCTGGTTTACAATTTCCAAATGGCTTTCATGTCCAGATCACAGAGAAAGATCAAAAGAAGCACGAATCAGAATGTACAACTACATATTAG
Protein sequence

>Msa0753500

MWVLCLGALVTMCIITRWVYRWRNPSCNGKLPPGTMGLPLLGESLQFFSPNTSCDIPPFIKKRMKRYGPIFKTNLVGRPVVVSTDPDLNYFIFQQEGKIFQSWYPDTFTEIFGQQNVGSLHGFMYKYLKNMMLNLFGPESLKKMISEVEQAACRTLQQASCQDSVELKEATETMIFDLTAKKLISYDPTESSENLRENFVAFIQGLISFPLNIPGTAYNKCLQGRKRAMKMLKNMLQERREMPRKQQKDFFDYVIEELRKEGTLLTEAIALDLMFVLLFASFETTSQALTYAIKLLSDNPLVFKQLQEEHEAILERRENPNSGVTWQEYKSMTFTFQLITETARLANIVPGIFRKALREINFKGYTIPAGWAIMVCPPAVHLNPAKYQDPLVFNPSRWEGMEPSGATKHFLAFGGGMRFCVGTEFAKVQMAVFLHCLVTKYRWRPIKGGNIVRTPGLQFPNGFHVQITEKDQKKHESECTTTY*