AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0160790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0160790 MtrunA17_Chr1g0174161 98.658 298 4 0 1 298 1 298 0.0 607
Msa0160790 MtrunA17_Chr7g0258161 67.610 318 77 8 1 298 1 312 2.30e-128 369
Msa0160790 MtrunA17_Chr4g0035101 55.147 136 56 1 115 245 93 228 4.48e-42 148
Msa0160790 MtrunA17_Chr1g0152131 42.396 217 87 7 87 279 201 403 3.27e-40 145
Msa0160790 MtrunA17_Chr8g0385911 70.408 98 24 3 151 243 134 231 4.61e-40 142
Msa0160790 MtrunA17_Chr7g0234761 44.500 200 87 6 104 285 243 436 1.18e-39 145
Msa0160790 MtrunA17_Chr3g0144641 68.041 97 31 0 157 253 188 284 1.44e-39 142
Msa0160790 MtrunA17_Chr8g0365941 55.224 134 51 3 112 242 260 387 8.45e-39 142
Msa0160790 MtrunA17_Chr5g0421111 70.787 89 26 0 157 245 362 450 2.67e-38 142
Msa0160790 MtrunA17_Chr8g0339091 59.804 102 41 0 157 258 288 389 2.85e-37 138
Msa0160790 MtrunA17_Chr3g0131771 56.522 115 41 2 157 268 144 252 7.99e-37 134
Msa0160790 MtrunA17_Chr8g0363921 69.412 85 26 0 157 241 148 232 2.40e-36 131
Msa0160790 MtrunA17_Chr5g0415291 52.756 127 60 0 105 231 57 183 1.26e-35 128
Msa0160790 MtrunA17_Chr6g0484271 44.025 159 70 3 82 237 90 232 7.61e-33 122
Msa0160790 MtrunA17_Chr4g0074161 49.485 97 39 3 156 248 202 292 4.79e-18 83.6
Msa0160790 MtrunA17_Chr1g0190731 39.200 125 68 4 160 282 193 311 1.77e-17 81.6
Msa0160790 MtrunA17_Chr1g0182791 46.377 69 36 1 162 230 319 386 9.28e-13 68.6
Msa0160790 MtrunA17_Chr4g0032951 47.692 65 34 0 160 224 355 419 2.01e-12 67.0
Msa0160790 MtrunA17_Chr4g0014771 47.692 65 34 0 160 224 118 182 2.61e-12 64.7
Msa0160790 MtrunA17_Chr1g0184841 49.425 87 38 3 160 241 120 205 7.21e-12 64.7
Msa0160790 MtrunA17_Chr1g0193321 41.429 70 40 1 163 232 465 533 9.67e-12 65.5
Msa0160790 MtrunA17_Chr3g0095391 31.429 105 70 2 163 267 312 414 2.10e-11 64.3
Msa0160790 MtrunA17_Chr1g0174271 44.928 69 38 0 160 228 298 366 4.29e-11 63.2
Msa0160790 MtrunA17_Chr7g0262691 33.594 128 75 2 107 225 190 316 8.80e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0160790 AT3G57800.2 51.198 334 116 10 2 294 19 346 3.70e-88 268
Msa0160790 AT2G42300.1 50.314 318 99 10 6 295 20 306 6.40e-82 250
Msa0160790 AT3G57800.1 44.882 381 116 11 2 294 19 393 1.08e-78 245
Msa0160790 AT2G42300.4 51.866 268 84 7 6 245 20 270 1.64e-71 222
Msa0160790 AT1G26260.4 38.672 256 100 8 68 268 77 330 2.55e-44 155
Msa0160790 AT1G26260.1 38.672 256 100 8 68 268 77 330 2.55e-44 155
Msa0160790 AT1G26260.6 38.672 256 100 8 68 268 77 330 2.55e-44 155
Msa0160790 AT1G26260.2 38.672 256 100 8 68 268 77 330 2.55e-44 155
Msa0160790 AT3G07340.2 39.689 257 104 7 73 298 140 376 2.42e-43 154
Msa0160790 AT3G07340.1 39.526 253 103 6 73 294 140 373 3.46e-43 154
Msa0160790 AT1G26260.3 48.734 158 71 3 120 268 123 279 5.29e-43 150
Msa0160790 AT2G42300.5 45.495 222 76 7 6 199 20 224 1.17e-42 146
Msa0160790 AT2G42300.3 45.495 222 76 7 6 199 20 224 1.17e-42 146
Msa0160790 AT1G26260.5 48.734 158 71 3 120 268 152 308 1.18e-42 150
Msa0160790 AT2G42300.2 45.495 222 76 7 6 199 20 224 1.21e-42 146
Msa0160790 AT3G23690.1 48.454 194 83 6 117 295 144 335 9.36e-42 148
Msa0160790 AT1G68920.1 60.684 117 40 2 157 268 300 415 3.95e-41 149
Msa0160790 AT1G68920.4 60.684 117 40 2 157 268 300 415 3.95e-41 149
Msa0160790 AT1G68920.2 60.684 117 40 2 157 268 300 415 3.95e-41 149
Msa0160790 AT1G68920.3 60.684 117 40 2 157 268 299 414 4.06e-41 149
Msa0160790 AT1G10120.2 55.970 134 55 2 125 255 169 301 3.98e-40 144
Msa0160790 AT1G10120.1 55.970 134 55 2 125 255 169 301 3.98e-40 144
Msa0160790 AT4G34530.1 55.814 129 50 2 153 281 165 286 2.98e-39 140
Msa0160790 AT2G18300.1 44.242 165 67 3 122 267 130 288 3.25e-38 138
Msa0160790 AT5G48560.2 68.478 92 28 1 157 247 298 389 7.03e-38 140
Msa0160790 AT5G50915.3 45.604 182 84 8 114 285 89 265 7.85e-38 135
Msa0160790 AT5G50915.4 45.604 182 84 8 114 285 89 265 7.85e-38 135
Msa0160790 AT5G48560.1 68.478 92 28 1 157 247 298 389 1.08e-37 140
Msa0160790 AT5G50915.1 48.780 164 69 8 114 267 89 247 1.48e-37 135
Msa0160790 AT5G50915.2 48.780 164 69 8 114 267 89 247 1.48e-37 135
Msa0160790 AT2G18300.2 43.713 167 67 4 122 267 130 290 1.14e-36 134
Msa0160790 AT4G36540.2 48.201 139 65 2 115 246 89 227 2.75e-36 132
Msa0160790 AT2G18300.3 43.713 167 67 4 122 267 130 290 2.86e-36 133
Msa0160790 AT4G36540.1 48.551 138 64 2 115 245 89 226 3.00e-36 132
Msa0160790 AT1G59640.1 78.667 75 16 0 157 231 133 207 5.12e-36 130
Msa0160790 AT1G59640.2 65.979 97 33 0 157 253 133 229 2.05e-35 130
Msa0160790 AT1G18400.2 68.750 80 25 0 158 237 143 222 9.84e-33 121
Msa0160790 AT1G18400.1 68.750 80 25 0 158 237 143 222 1.51e-32 121
Msa0160790 AT1G73830.1 68.354 79 25 0 159 237 146 224 4.20e-32 120
Msa0160790 AT5G62610.2 72.000 75 21 0 157 231 150 224 4.66e-32 120
Msa0160790 AT5G62610.1 72.000 75 21 0 157 231 150 224 4.66e-32 120
Msa0160790 AT1G73830.2 68.354 79 25 0 159 237 146 224 4.70e-32 120
Msa0160790 AT1G25330.1 66.250 80 27 0 158 237 102 181 9.40e-31 115
Msa0160790 AT2G24260.2 60.606 66 25 1 160 225 35 99 2.78e-17 80.1
Msa0160790 AT4G30980.1 62.121 66 24 1 160 225 130 194 3.77e-17 80.5
Msa0160790 AT4G30980.2 62.121 66 24 1 160 225 178 242 5.19e-17 80.9
Msa0160790 AT2G24260.1 60.606 66 25 1 160 225 138 202 7.76e-17 80.1
Msa0160790 AT5G58010.1 61.194 67 25 1 159 225 98 163 1.03e-16 79.3
Msa0160790 AT2G20180.7 40.179 112 52 3 117 225 172 271 1.83e-15 76.6
Msa0160790 AT2G20180.1 40.179 112 52 3 117 225 172 271 1.83e-15 76.6
Msa0160790 AT2G20180.5 40.179 112 52 3 117 225 172 271 1.83e-15 76.6
Msa0160790 AT2G20180.4 40.179 112 52 3 117 225 243 342 2.33e-15 76.6
Msa0160790 AT2G20180.6 40.179 112 52 3 117 225 243 342 2.33e-15 76.6
Msa0160790 AT2G20180.2 40.179 112 52 3 117 225 243 342 2.33e-15 76.6
Msa0160790 AT2G20180.3 40.179 112 52 3 117 225 243 342 2.33e-15 76.6
Msa0160790 AT2G20180.8 39.450 109 51 3 117 222 243 339 4.88e-14 72.0
Msa0160790 AT4G28800.1 42.466 73 41 1 163 235 252 323 8.98e-13 68.6
Msa0160790 AT1G09530.3 46.032 63 33 1 163 225 340 401 5.02e-12 66.6
Msa0160790 AT1G09530.2 46.032 63 33 1 163 225 340 401 5.02e-12 66.6
Msa0160790 AT1G09530.5 46.032 63 33 1 163 225 340 401 5.02e-12 66.6
Msa0160790 AT1G09530.1 46.032 63 33 1 163 225 340 401 5.02e-12 66.6
Msa0160790 AT1G09530.4 46.032 63 33 1 163 225 340 401 5.02e-12 66.6
Msa0160790 AT1G09530.6 46.032 63 33 1 163 225 340 401 5.02e-12 66.6
Msa0160790 AT4G28790.1 41.667 72 41 1 163 234 274 344 9.71e-12 65.5
Msa0160790 AT4G28815.2 36.082 97 57 2 163 255 71 166 9.88e-12 63.9
Msa0160790 AT4G28815.1 36.082 97 57 2 163 255 147 242 3.91e-11 63.2
Msa0160790 AT2G42280.1 37.778 90 55 1 134 223 254 342 3.94e-11 63.5
Msa0160790 AT4G02590.3 48.837 86 38 3 160 240 83 167 5.53e-11 62.0
Msa0160790 AT4G02590.2 47.253 91 42 3 160 245 146 235 7.52e-11 62.4
Msa0160790 AT4G02590.1 47.253 91 42 3 160 245 146 235 7.52e-11 62.4

Find 125 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCCATTGTGTGGGATTTC+TGG 0.105980 1_4:-34218341 None:intergenic
TCAAGGTTGAAATCAATTAT+TGG 0.224458 1_4:-34217434 None:intergenic
TTCCTTCCTCTTCGCACTCT+TGG 0.267664 1_4:-34214252 None:intergenic
TGCATTCCACCAACCACTTT+GGG 0.284445 1_4:+34218397 Msa0160790:CDS
ATCAGGAACAGCATTGGTTT+TGG 0.289474 1_4:+34216781 Msa0160790:CDS
GGAGAATGAAGGAGGGAAAG+AGG 0.299691 1_4:-34213790 None:intergenic
CAAGGTTGAAATCAATTATT+GGG 0.303962 1_4:-34217433 None:intergenic
AAATTTCCTTTACAGATATC+AGG 0.320893 1_4:+34216764 Msa0160790:intron
CAGTATGTATACTAACTATA+GGG 0.322900 1_4:+34219050 Msa0160790:three_prime_UTR
CTTCACTCGTCGGAGATTAC+CGG 0.335175 1_4:+34214020 Msa0160790:CDS
TATGACTCATCGGCAAATTC+AGG 0.337138 1_4:+34218472 Msa0160790:three_prime_UTR
CGGAAGCTCCTCGCCGTTGC+CGG 0.341941 1_4:-34214430 None:intergenic
TATAGGGGTCATTCAGTCTT+AGG 0.342811 1_4:+34219066 Msa0160790:three_prime_UTR
AGAATGAAGGAGGGAAAGAG+GGG 0.348996 1_4:-34213788 None:intergenic
GTTTGGATATCTCATATAAA+CGG 0.356627 1_4:-34213640 None:intergenic
TCAGTATGTATACTAACTAT+AGG 0.357630 1_4:+34219049 Msa0160790:three_prime_UTR
AGTTAACTGTGTAAGTTGTT+GGG 0.367223 1_4:-34213815 None:intergenic
GAGAATGAAGGAGGGAAAGA+GGG 0.368426 1_4:-34213789 None:intergenic
TTTCTCAAACCGGTTCATTT+CGG 0.375009 1_4:+34213851 Msa0160790:five_prime_UTR
GTTCTGTGTTGGTTCTTCTC+TGG 0.383542 1_4:-34213712 None:intergenic
TCCGGCGAAAACGGAGAATC+TGG 0.391498 1_4:-34214126 None:intergenic
GGAAGGAAAAGTTAAATTAC+CGG 0.394123 1_4:-34214078 None:intergenic
ATGCATTCCACCAACCACTT+TGG 0.397314 1_4:+34218396 Msa0160790:CDS
ATCGCCGCCGACGAGAATTC+CGG 0.408348 1_4:+34214411 Msa0160790:CDS
TCAGAGTCGGTTGGAAAACC+TGG 0.413514 1_4:+34218958 Msa0160790:three_prime_UTR
CGGTAAGTTCGGCGAGTTTG+TGG 0.414209 1_4:-34214156 None:intergenic
GAGTTCGCTGTTTCCGTCGC+CGG 0.429642 1_4:-34213951 None:intergenic
TGCTGTCTGTTTCCATTGTG+TGG 0.436586 1_4:-34218350 None:intergenic
TTTGGATATCTCATATAAAC+GGG 0.441271 1_4:-34213639 None:intergenic
TCCTTCACCTGCGGTAAGTT+CGG 0.445738 1_4:-34214167 None:intergenic
CAAGTAAGTGGATAGGGTTT+CGG 0.446641 1_4:-34214050 None:intergenic
CAAACCGGTTCATTTCGGTT+TGG 0.446795 1_4:+34213856 Msa0160790:five_prime_UTR
AAATTAGCCTTGATTTGAGC+AGG 0.448707 1_4:+34218899 Msa0160790:three_prime_UTR
CGAAGAAATTCAAGGAATCA+TGG 0.453331 1_4:+34213926 Msa0160790:CDS
CTTCTTCCTTGCTAGCCTGT+TGG 0.454803 1_4:-34218992 None:intergenic
GACCAAACCTTGTTGCAACC+TGG 0.459346 1_4:-34215157 None:intergenic
CTGTTGGCTGAATAAAATCC+AGG 0.459891 1_4:-34218976 None:intergenic
ATAATGTGCTTGTTCTGTGT+TGG 0.461228 1_4:-34213723 None:intergenic
GAGGGGAGAAAGAAAGAGAG+TGG 0.461744 1_4:-34213771 None:intergenic
AGATGAAGATGGAGCTATGA+AGG 0.464102 1_4:+34218812 Msa0160790:three_prime_UTR
GTTTGAGAAAACTTGAAAAC+CGG 0.466672 1_4:-34213838 None:intergenic
GAGTTAACTGTGTAAGTTGT+TGG 0.466741 1_4:-34213816 None:intergenic
AATGAAACTGTTGCAAGAGC+TGG 0.476800 1_4:+34215132 Msa0160790:CDS
ACAGCGGGTGAAACTGCGTT+AGG 0.478912 1_4:-34218314 None:intergenic
CAATTCAACGAAGAAATTCA+AGG 0.489910 1_4:+34213918 Msa0160790:CDS
TGAACCAAACCGAAATGAAC+CGG 0.491780 1_4:-34213860 None:intergenic
TGTCCTCTGTTTGTCAGAGT+CGG 0.492707 1_4:+34218945 Msa0160790:three_prime_UTR
TTACCCTTTCTGCTAAGCTA+TGG 0.495150 1_4:-34214494 None:intergenic
ACCAAACCTTGTTGCAACCT+GGG 0.495296 1_4:-34215156 None:intergenic
GAGGAAGGAACGAGAGAAGA+AGG 0.495426 1_4:+34214265 Msa0160790:CDS
GCACTCAAATCAGATGAAGA+TGG 0.500237 1_4:+34218801 Msa0160790:three_prime_UTR
GAGCAGGCACAACATTCAGC+AGG 0.501059 1_4:+34218915 Msa0160790:three_prime_UTR
GGGATTTCTGGCCACACAGC+GGG 0.504729 1_4:-34218329 None:intergenic
CTCTGTTTGTCAGAGTCGGT+TGG 0.512545 1_4:+34218949 Msa0160790:three_prime_UTR
CTGTTGCAAGAGCTGGTCCC+AGG 0.513301 1_4:+34215139 Msa0160790:CDS
TTGTAACGGAAGTGTTGAAT+AGG 0.513389 1_4:-34213599 None:intergenic
AGGAATCATGGCTCCGGCGA+CGG 0.514735 1_4:+34213938 Msa0160790:CDS
AAAAGGATTCGAATTGGTTG+AGG 0.515410 1_4:-34213557 None:intergenic
AACTGTGTAAGTTGTTGGGG+GGG 0.517077 1_4:-34213811 None:intergenic
GCTGTCTGTTTCCATTGTGT+GGG 0.520796 1_4:-34218349 None:intergenic
TAGCCATAGCTTAGCAGAAA+GGG 0.520877 1_4:+34214491 Msa0160790:CDS
GTGTTACAAGTAAGTGGATA+GGG 0.524568 1_4:-34214056 None:intergenic
TTACCGGTGTTACAAGTAAG+TGG 0.531110 1_4:-34214062 None:intergenic
GTTAACTGTGTAAGTTGTTG+GGG 0.531995 1_4:-34213814 None:intergenic
AAAACAACGTTGTTACGCTA+CGG 0.546411 1_4:-34213672 None:intergenic
ACAGATATCAGGAACAGCAT+TGG 0.547071 1_4:+34216775 Msa0160790:intron
TCAACCAACGCGGCGTTGGA+AGG 0.547699 1_4:-34214095 None:intergenic
CATCCACCTTCTTCAGTCTC+CGG 0.551105 1_4:-34214197 None:intergenic
AATTCAAGGAATCATGGCTC+CGG 0.553332 1_4:+34213932 Msa0160790:CDS
TGTTGTGCCTGCTCAAATCA+AGG 0.557928 1_4:-34218906 None:intergenic
GGTGTTACAAGTAAGTGGAT+AGG 0.563026 1_4:-34214057 None:intergenic
ATTCAGCCAACAGGCTAGCA+AGG 0.565949 1_4:+34218986 Msa0160790:three_prime_UTR
CAGCGGGTGAAACTGCGTTA+GGG 0.566488 1_4:-34218313 None:intergenic
GCCGACGAGAATTCCGGCAA+CGG 0.567888 1_4:+34214417 Msa0160790:CDS
GAATTTCCGTACTGTTGTAA+CGG 0.568743 1_4:-34213613 None:intergenic
GATGAAGATGGAGCTATGAA+GGG 0.570787 1_4:+34218813 Msa0160790:three_prime_UTR
GAGCTACCGGAGACTGAAGA+AGG 0.570935 1_4:+34214191 Msa0160790:CDS
CTGCAGCTAATATGCTGTCA+AGG 0.571111 1_4:-34217451 None:intergenic
TTCCAAGAGTGCGAAGAGGA+AGG 0.571829 1_4:+34214250 Msa0160790:CDS
TGTTGAACTTCTTCACTCGT+CGG 0.572770 1_4:+34214010 Msa0160790:CDS
GCAGGTGAAGGATGAGCTAC+CGG 0.582554 1_4:+34214178 Msa0160790:CDS
TAACTGTGTAAGTTGTTGGG+GGG 0.584556 1_4:-34213812 None:intergenic
GCCGAACTTACCGCAGGTGA+AGG 0.584799 1_4:+34214166 Msa0160790:CDS
CATTCTGTAGAGATTGCACA+TGG 0.585158 1_4:-34216817 None:intergenic
ACTTCTAAGTTATGACTCAT+CGG 0.587921 1_4:+34218462 Msa0160790:three_prime_UTR
ACACTTCCGTTACAACAGTA+CGG 0.590861 1_4:+34213607 Msa0160790:five_prime_UTR
GCGTTCAACCAACGCGGCGT+TGG 0.594819 1_4:-34214099 None:intergenic
GCCGTTGCCGGAATTCTCGT+CGG 0.595821 1_4:-34214418 None:intergenic
ACAACTTACACAGTTAACTC+CGG 0.599212 1_4:+34213819 Msa0160790:five_prime_UTR
ATTGTAGGGAATGTCTCTCA+TGG 0.599541 1_4:+34218280 Msa0160790:intron
GACAGCAATTTCAGCAATCG+TGG 0.599757 1_4:+34218366 Msa0160790:CDS
ATAGCCATAGCTTAGCAGAA+AGG 0.599793 1_4:+34214490 Msa0160790:CDS
CAGATTGTAAAATCATTGAA+CGG 0.599861 1_4:+34219102 Msa0160790:three_prime_UTR
CATTCCACCAACCACTTTGG+GGG 0.604196 1_4:+34218399 Msa0160790:CDS
CGAACTCGAACGTGAACGTA+CGG 0.605120 1_4:-34214450 None:intergenic
GCATTCCACCAACCACTTTG+GGG 0.608496 1_4:+34218398 Msa0160790:CDS
GAATTGAATCGACTCGAACG+TGG 0.610167 1_4:-34213901 None:intergenic
AGTATGTATACTAACTATAG+GGG 0.615156 1_4:+34219051 Msa0160790:three_prime_UTR
AGTTCAACAACCTGCGTCGG+TGG 0.615170 1_4:-34213996 None:intergenic
GGTTTGGTTCAGTTGAACGA+TGG 0.616544 1_4:+34213872 Msa0160790:exon
GCAATCTCTACAGAATGAAG+TGG 0.617385 1_4:+34216823 Msa0160790:CDS
ATCTCTACAGAATGAAGTGG+AGG 0.623403 1_4:+34216826 Msa0160790:CDS
TGGATGTGTCTCTGATCCAA+CGG 0.628322 1_4:+34214214 Msa0160790:CDS
CGAGAATTCCGGCAACGGCG+AGG 0.633666 1_4:+34214422 Msa0160790:CDS
ATGAAGGGGTACAGAAGCAG+TGG 0.635388 1_4:+34218828 Msa0160790:three_prime_UTR
ACGCAGTTTCACCCGCTGTG+TGG 0.639303 1_4:+34218318 Msa0160790:CDS
CGGTGGTAGTTCGAGAAGTG+CGG 0.644635 1_4:-34213979 None:intergenic
GTAAGTGGATAGGGTTTCGG+CGG 0.645408 1_4:-34214047 None:intergenic
TCTCGAACTACCACCGACGC+AGG 0.645573 1_4:+34213986 Msa0160790:CDS
GGCGAAAACGGAGAATCTGG+CGG 0.648507 1_4:-34214123 None:intergenic
CTACCGGAGACTGAAGAAGG+TGG 0.649449 1_4:+34214194 Msa0160790:CDS
TATCCACTTACTTGTAACAC+CGG 0.653561 1_4:+34214059 Msa0160790:CDS
TGGCCAGAAATCCCACACAA+TGG 0.662181 1_4:+34218338 Msa0160790:CDS
GCTGGTCCCAGGTTGCAACA+AGG 0.662336 1_4:+34215150 Msa0160790:CDS
ATGAAGATGGAGCTATGAAG+GGG 0.663574 1_4:+34218814 Msa0160790:three_prime_UTR
TTAACTGTGTAAGTTGTTGG+GGG 0.668803 1_4:-34213813 None:intergenic
CGAATTCCAAGAGTGCGAAG+AGG 0.670718 1_4:+34214246 Msa0160790:CDS
AGAAGTTCAACAACCTGCGT+CGG 0.673010 1_4:-34213999 None:intergenic
CAACCGACTCTGACAAACAG+AGG 0.673114 1_4:-34218948 None:intergenic
AAACTCGCCGAACTTACCGC+AGG 0.673662 1_4:+34214160 Msa0160790:CDS
GGTAGCTCATCCTTCACCTG+CGG 0.677655 1_4:-34214176 None:intergenic
GTTGCCGGAATTCTCGTCGG+CGG 0.688782 1_4:-34214415 None:intergenic
TGGGATTTCTGGCCACACAG+CGG 0.724797 1_4:-34218330 None:intergenic
GGCGGCGCGTTCAACCAACG+CGG 0.742023 1_4:-34214105 None:intergenic
GTTCACGTTCGAGTTCGACG+AGG 0.757130 1_4:+34214456 Msa0160790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr1_4:34214945-34214964 Msa0160790:intron 0.0%
!! ATAAAAAGTTATGAATTTAA+TGG - chr1_4:34214891-34214910 None:intergenic 10.0%
!! TTAATGTAATAATATATCAT+CGG + chr1_4:34214921-34214940 Msa0160790:intron 10.0%
!!! AATAATTTTATTTTCAAGTA+AGG + chr1_4:34216296-34216315 Msa0160790:intron 10.0%
!! TATAAATACAATCTAAATAA+GGG - chr1_4:34216689-34216708 None:intergenic 10.0%
!! ATATAAATACAATCTAAATA+AGG - chr1_4:34216690-34216709 None:intergenic 10.0%
!! AAGTTAGAAAATAATATAAA+TGG + chr1_4:34217249-34217268 Msa0160790:intron 10.0%
!!! AAATAATATCTGAAATTAAA+TGG - chr1_4:34218227-34218246 None:intergenic 10.0%
!!! AAATTTTAAAATTGATTGAA+AGG + chr1_4:34218677-34218696 Msa0160790:intron 10.0%
!!! AATTTTAAAATTGATTGAAA+GGG + chr1_4:34218678-34218697 Msa0160790:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_4:34216539-34216558 Msa0160790:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_4:34216539-34216558 Msa0160790:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_4:34216539-34216558 Msa0160790:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_4:34216539-34216558 Msa0160790:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_4:34216539-34216558 Msa0160790:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_4:34216539-34216558 Msa0160790:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_4:34216539-34216558 Msa0160790:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_4:34216539-34216558 Msa0160790:intron 100.0%
!! GTTTGTAATTGTAATAAAAA+AGG - chr1_4:34213577-34213596 None:intergenic 15.0%
!! AAAATAAAAATTGAGTTTAG+TGG + chr1_4:34214749-34214768 Msa0160790:intron 15.0%
!! AAAGAAATTATACATAAGAA+GGG + chr1_4:34215529-34215548 Msa0160790:intron 15.0%
!!! TAGTAAATAAAAGTACTTTT+CGG - chr1_4:34215605-34215624 None:intergenic 15.0%
!!! TAAAACAATGGATTAATTTA+TGG - chr1_4:34215766-34215785 None:intergenic 15.0%
!! AATTAAGGAAATAATTATTG+AGG - chr1_4:34216216-34216235 None:intergenic 15.0%
!!! TTTTTTTTTTCTTTCTTCTT+TGG + chr1_4:34216255-34216274 Msa0160790:intron 15.0%
!!! ATTTTCATTATTTACATGAT+TGG - chr1_4:34216517-34216536 None:intergenic 15.0%
!!! TTAAGAACTTTAAAAATTAG+TGG + chr1_4:34216961-34216980 Msa0160790:intron 15.0%
!!! ATATTATTTTCTAACTTTCA+AGG - chr1_4:34217246-34217265 None:intergenic 15.0%
!! CAAAATTGAAAATATTTCAT+AGG + chr1_4:34217298-34217317 Msa0160790:intron 15.0%
!!! TTTTCTCTTTTATTGAAAAA+AGG + chr1_4:34217488-34217507 Msa0160790:intron 15.0%
!! TAAAAATTAAAATGTCAAGA+AGG - chr1_4:34217610-34217629 None:intergenic 15.0%
!! TAATAAAAAAGGATTCGAAT+TGG - chr1_4:34213566-34213585 None:intergenic 20.0%
!!! TTGCACTTAGAATTAATTTT+AGG + chr1_4:34214619-34214638 Msa0160790:intron 20.0%
!! TTTCAAAAGATTATATGATG+TGG + chr1_4:34214665-34214684 Msa0160790:intron 20.0%
!! AAAAATATTAATTGATACGG+TGG + chr1_4:34214843-34214862 Msa0160790:intron 20.0%
!!! TTTTAATTTGATTGTGTTGT+AGG + chr1_4:34215084-34215103 Msa0160790:intron 20.0%
!! TGAAGATTAACATCTTAAAA+AGG - chr1_4:34215192-34215211 None:intergenic 20.0%
!!! TACTTTAATTTTTGGTGAAA+AGG - chr1_4:34215349-34215368 None:intergenic 20.0%
!!! AAAGCATGTACTTTAATTTT+TGG - chr1_4:34215357-34215376 None:intergenic 20.0%
!! AAAAACTGTGGTTTATTTAA+TGG - chr1_4:34215488-34215507 None:intergenic 20.0%
!! CAAAGAAATTATACATAAGA+AGG + chr1_4:34215528-34215547 Msa0160790:intron 20.0%
!!! AGTAAATAAAAGTACTTTTC+GGG - chr1_4:34215604-34215623 None:intergenic 20.0%
!!! AGTAATATAGTGATTCTTTT+TGG + chr1_4:34215740-34215759 Msa0160790:intron 20.0%
!!! AATCCATTGTTTTATGAAAA+AGG + chr1_4:34215772-34215791 Msa0160790:intron 20.0%
!! ATTTATGGGATAATGAATAT+AGG + chr1_4:34216067-34216086 Msa0160790:intron 20.0%
!! TTTATGGGATAATGAATATA+GGG + chr1_4:34216068-34216087 Msa0160790:intron 20.0%
!! TGTGTATATAACTAAAGTTT+AGG - chr1_4:34216193-34216212 None:intergenic 20.0%
!! GTAGCATAAACTTTAAATTA+AGG - chr1_4:34216231-34216250 None:intergenic 20.0%
!!! TCATTTAGATTGCAAAATTT+TGG - chr1_4:34216397-34216416 None:intergenic 20.0%
!! TCATGTAAATAATGAAAATG+TGG + chr1_4:34216518-34216537 Msa0160790:intron 20.0%
!! CATGTAAATAATGAAAATGT+GGG + chr1_4:34216519-34216538 Msa0160790:intron 20.0%
!! ATGTAAATAATGAAAATGTG+GGG + chr1_4:34216520-34216539 Msa0160790:intron 20.0%
!! AAATTAAGAAACCTTAAACA+CGG + chr1_4:34216663-34216682 Msa0160790:intron 20.0%
!!! TTTTATATAACTGACATTCT+AGG + chr1_4:34216854-34216873 Msa0160790:intron 20.0%
!!! TGCAAATTTTTCTACAAAAA+TGG + chr1_4:34217131-34217150 Msa0160790:intron 20.0%
!! GGAATTTATTTATTTGTCTT+TGG + chr1_4:34217509-34217528 Msa0160790:intron 20.0%
!! TTTATTTATTTGTCTTTGGT+TGG + chr1_4:34217513-34217532 Msa0160790:intron 20.0%
!! TTATTTATTTGTCTTTGGTT+GGG + chr1_4:34217514-34217533 Msa0160790:intron 20.0%
!! TAGTCTAATAAAACTAAATC+AGG - chr1_4:34217678-34217697 None:intergenic 20.0%
!!! TCATCAAATTTGTTTTTACT+TGG + chr1_4:34217740-34217759 Msa0160790:intron 20.0%
!! AATAGTTAAACTCAATTAGA+TGG - chr1_4:34217766-34217785 None:intergenic 20.0%
!!! TGTAAATACTTTTTTTCTTG+AGG + chr1_4:34217974-34217993 Msa0160790:intron 20.0%
!!! GTAAATACTTTTTTTCTTGA+GGG + chr1_4:34217975-34217994 Msa0160790:intron 20.0%
!! ATTAATATGTCCTTAAGATA+AGG + chr1_4:34218727-34218746 Msa0160790:intron 20.0%
! TTTGGATATCTCATATAAAC+GGG - chr1_4:34213642-34213661 None:intergenic 25.0%
! GTTTGGATATCTCATATAAA+CGG - chr1_4:34213643-34213662 None:intergenic 25.0%
! ACGAACTCAATTGAAAAATT+AGG + chr1_4:34214305-34214324 Msa0160790:intron 25.0%
! CGAACTCAATTGAAAAATTA+GGG + chr1_4:34214306-34214325 Msa0160790:intron 25.0%
! ATAAAAATTGAGTTTAGTGG+TGG + chr1_4:34214752-34214771 Msa0160790:intron 25.0%
! TTATGAATTTAATGGTGTGT+GGG - chr1_4:34214883-34214902 None:intergenic 25.0%
! CATCTTAAAAAGGAATGAAA+AGG - chr1_4:34215182-34215201 None:intergenic 25.0%
! AGACAATTTAGACTAAATCA+TGG - chr1_4:34215264-34215283 None:intergenic 25.0%
!! AAAGAGACAATAGTACTTTT+AGG - chr1_4:34215287-34215306 None:intergenic 25.0%
!!! TAAAAGTACTATTGTCTCTT+TGG + chr1_4:34215286-34215305 Msa0160790:intron 25.0%
! CACATATATCTAAAAAACTG+TGG - chr1_4:34215500-34215519 None:intergenic 25.0%
!!! CTAACTTGTAATTTTGTAAG+AGG - chr1_4:34215570-34215589 None:intergenic 25.0%
! CTTACAAAATTACAAGTTAG+TGG + chr1_4:34215570-34215589 Msa0160790:intron 25.0%
! TAGAGGAATAAAATCTGTTT+AGG - chr1_4:34215642-34215661 None:intergenic 25.0%
!!! CTTTTAGAGTAAAATGTTAG+AGG - chr1_4:34215659-34215678 None:intergenic 25.0%
!!! CTAACATTTTACTCTAAAAG+TGG + chr1_4:34215659-34215678 Msa0160790:intron 25.0%
!!! TGTCCTTTTTCATAAAACAA+TGG - chr1_4:34215778-34215797 None:intergenic 25.0%
! TTTGTAGTACAGGATAATTA+AGG + chr1_4:34215818-34215837 Msa0160790:intron 25.0%
! ATTAGTATTTCACTTCCTTA+GGG - chr1_4:34215992-34216011 None:intergenic 25.0%
! TGAAATACTAATCCATCTTT+GGG + chr1_4:34216000-34216019 Msa0160790:intron 25.0%
! TGGTATCTATCAATCATTTA+TGG + chr1_4:34216052-34216071 Msa0160790:intron 25.0%
! GGTATCTATCAATCATTTAT+GGG + chr1_4:34216053-34216072 Msa0160790:intron 25.0%
! AAAGAAACCATAACTTTAGA+AGG + chr1_4:34216096-34216115 Msa0160790:intron 25.0%
!!! TTTTTTTCTTTCTTCTTTGG+TGG + chr1_4:34216258-34216277 Msa0160790:intron 25.0%
! ATCAAGCATGATTTATTAAC+AGG - chr1_4:34216362-34216381 None:intergenic 25.0%
! TGTAAATAATGAAAATGTGG+GGG + chr1_4:34216521-34216540 Msa0160790:intron 25.0%
! AAATTTCCTTTACAGATATC+AGG + chr1_4:34216764-34216783 Msa0160790:intron 25.0%
! TTTGAAGGATCAGATAAATA+CGG - chr1_4:34217005-34217024 None:intergenic 25.0%
! TAATGTCACATAGAATAACA+GGG - chr1_4:34217106-34217125 None:intergenic 25.0%
! ATAATGTCACATAGAATAAC+AGG - chr1_4:34217107-34217126 None:intergenic 25.0%
! CAAGGTTGAAATCAATTATT+GGG - chr1_4:34217436-34217455 None:intergenic 25.0%
! TCAAGGTTGAAATCAATTAT+TGG - chr1_4:34217437-34217456 None:intergenic 25.0%
!!! TTTTTAGTTCGAATTTATCG+AGG + chr1_4:34217624-34217643 Msa0160790:intron 25.0%
! TGAAATGATGAACATGAAAA+TGG + chr1_4:34217808-34217827 Msa0160790:intron 25.0%
! GAAATGATGAACATGAAAAT+GGG + chr1_4:34217809-34217828 Msa0160790:intron 25.0%
! AAATGATGAACATGAAAATG+GGG + chr1_4:34217810-34217829 Msa0160790:intron 25.0%
!! AATGTAATAGAGTACTTAAC+AGG + chr1_4:34218002-34218021 Msa0160790:intron 25.0%
!!! TTGTTACTTTTTAGTTACCA+AGG + chr1_4:34218113-34218132 Msa0160790:intron 25.0%
!! TATCTGAAATTAAATGGAGA+AGG - chr1_4:34218221-34218240 None:intergenic 25.0%
!! CAATGAATTTTATTAGCAGA+AGG - chr1_4:34218256-34218275 None:intergenic 25.0%
! AAAATTCATTGTGACATTGT+AGG + chr1_4:34218265-34218284 Msa0160790:intron 25.0%
! AAATTCATTGTGACATTGTA+GGG + chr1_4:34218266-34218285 Msa0160790:intron 25.0%
! TCAGTATGTATACTAACTAT+AGG + chr1_4:34219049-34219068 Msa0160790:three_prime_UTR 25.0%
! CAGTATGTATACTAACTATA+GGG + chr1_4:34219050-34219069 Msa0160790:three_prime_UTR 25.0%
! AGTATGTATACTAACTATAG+GGG + chr1_4:34219051-34219070 Msa0160790:three_prime_UTR 25.0%
! CAGATTGTAAAATCATTGAA+CGG + chr1_4:34219102-34219121 Msa0160790:three_prime_UTR 25.0%
AGTTAACTGTGTAAGTTGTT+GGG - chr1_4:34213818-34213837 None:intergenic 30.0%
GTTTGAGAAAACTTGAAAAC+CGG - chr1_4:34213841-34213860 None:intergenic 30.0%
!!! GTTTTCAAGTTTTCTCAAAC+CGG + chr1_4:34213841-34213860 Msa0160790:five_prime_UTR 30.0%
CAATTCAACGAAGAAATTCA+AGG + chr1_4:34213918-34213937 Msa0160790:CDS 30.0%
GGAAGGAAAAGTTAAATTAC+CGG - chr1_4:34214081-34214100 None:intergenic 30.0%
TCTGAATTTCTCACTAATTG+AGG + chr1_4:34214332-34214351 Msa0160790:intron 30.0%
CTGAATTTCTCACTAATTGA+GGG + chr1_4:34214333-34214352 Msa0160790:intron 30.0%
! ATGATGTGGCAGATTTTTAT+TGG + chr1_4:34214679-34214698 Msa0160790:intron 30.0%
GTTATGAATTTAATGGTGTG+TGG - chr1_4:34214884-34214903 None:intergenic 30.0%
ACTATTGTCTCTTTGGATTA+TGG + chr1_4:34215293-34215312 Msa0160790:intron 30.0%
CTATTGTCTCTTTGGATTAT+GGG + chr1_4:34215294-34215313 Msa0160790:intron 30.0%
TATTGTCTCTTTGGATTATG+GGG + chr1_4:34215295-34215314 Msa0160790:intron 30.0%
CATAAGAAGGGAAATAGTAT+TGG + chr1_4:34215541-34215560 Msa0160790:intron 30.0%
AGGAATAAAATCTGTTTAGG+AGG - chr1_4:34215639-34215658 None:intergenic 30.0%
ACAGAGAAAAATATACGTCA+TGG + chr1_4:34215795-34215814 Msa0160790:intron 30.0%
! TGTGTTGATACATGTATTCA+TGG + chr1_4:34215963-34215982 Msa0160790:intron 30.0%
! GTGTTGATACATGTATTCAT+GGG + chr1_4:34215964-34215983 Msa0160790:intron 30.0%
TTAGTATTTCACTTCCTTAG+GGG - chr1_4:34215991-34216010 None:intergenic 30.0%
GATTAGTATTTCACTTCCTT+AGG - chr1_4:34215993-34216012 None:intergenic 30.0%
GTGAAATACTAATCCATCTT+TGG + chr1_4:34215999-34216018 Msa0160790:intron 30.0%
!! GATATTGCCTTCTAAAGTTA+TGG - chr1_4:34216106-34216125 None:intergenic 30.0%
TACCAAACAATAAACCTAAC+TGG + chr1_4:34216126-34216145 Msa0160790:intron 30.0%
ACCAAACAATAAACCTAACT+GGG + chr1_4:34216127-34216146 Msa0160790:intron 30.0%
GTTTGTCAATTGTCAATATC+AGG + chr1_4:34216489-34216508 Msa0160790:intron 30.0%
GTAAATAATGAAAATGTGGG+GGG + chr1_4:34216522-34216541 Msa0160790:intron 30.0%
TAAATAATGAAAATGTGGGG+GGG + chr1_4:34216523-34216542 Msa0160790:intron 30.0%
!! TCAGATTATTTTACCCGTAT+TGG - chr1_4:34216577-34216596 None:intergenic 30.0%
!! AATAGCTTTGAATCAAATCG+TGG - chr1_4:34216626-34216645 None:intergenic 30.0%
TTGAAGGATCAGATAAATAC+GGG - chr1_4:34217004-34217023 None:intergenic 30.0%
ATTTCATAGGATCTTTCTGT+TGG + chr1_4:34217311-34217330 Msa0160790:intron 30.0%
! GCAGATTTTATCAATGAAAC+TGG + chr1_4:34217400-34217419 Msa0160790:intron 30.0%
!! CTTGGCTCTAAAAATATTTG+AGG + chr1_4:34217567-34217586 Msa0160790:intron 30.0%
ATTCTTCTAAGTTTCCACAT+TGG + chr1_4:34217707-34217726 Msa0160790:intron 30.0%
ATGAATAACTCTAACCAATG+TGG - chr1_4:34217724-34217743 None:intergenic 30.0%
AGAATTTATAACCACTAGTG+AGG - chr1_4:34218077-34218096 None:intergenic 30.0%
CTGGTATATGGAATAGAAAA+GGG + chr1_4:34218143-34218162 Msa0160790:intron 30.0%
!!! TTTTCTGGGGTCATAAATTA+GGG - chr1_4:34218439-34218458 None:intergenic 30.0%
! AACTTAGAAGTGAGTTTTCT+GGG - chr1_4:34218453-34218472 None:intergenic 30.0%
! TAACTTAGAAGTGAGTTTTC+TGG - chr1_4:34218454-34218473 None:intergenic 30.0%
ACTTCTAAGTTATGACTCAT+CGG + chr1_4:34218462-34218481 Msa0160790:three_prime_UTR 30.0%
TGAGGGATAAACAAATTGAA+AGG + chr1_4:34218594-34218613 Msa0160790:intron 30.0%
TTACTTATTAGCATGTCTCT+CGG - chr1_4:34218631-34218650 None:intergenic 30.0%
GAGACATGCTAATAAGTAAT+TGG + chr1_4:34218632-34218651 Msa0160790:intron 30.0%
!! CTACTTCTGAAGATTTTCAA+TGG + chr1_4:34219172-34219191 Msa0160790:three_prime_UTR 30.0%
AAAAGGATTCGAATTGGTTG+AGG - chr1_4:34213560-34213579 None:intergenic 35.0%
!! TTGTAACGGAAGTGTTGAAT+AGG - chr1_4:34213602-34213621 None:intergenic 35.0%
GAATTTCCGTACTGTTGTAA+CGG - chr1_4:34213616-34213635 None:intergenic 35.0%
AAAACAACGTTGTTACGCTA+CGG - chr1_4:34213675-34213694 None:intergenic 35.0%
ATAATGTGCTTGTTCTGTGT+TGG - chr1_4:34213726-34213745 None:intergenic 35.0%
TTAACTGTGTAAGTTGTTGG+GGG - chr1_4:34213816-34213835 None:intergenic 35.0%
GTTAACTGTGTAAGTTGTTG+GGG - chr1_4:34213817-34213836 None:intergenic 35.0%
GAGTTAACTGTGTAAGTTGT+TGG - chr1_4:34213819-34213838 None:intergenic 35.0%
ACAACTTACACAGTTAACTC+CGG + chr1_4:34213819-34213838 Msa0160790:five_prime_UTR 35.0%
! TTTCTCAAACCGGTTCATTT+CGG + chr1_4:34213851-34213870 Msa0160790:five_prime_UTR 35.0%
CGAAGAAATTCAAGGAATCA+TGG + chr1_4:34213926-34213945 Msa0160790:CDS 35.0%
GTGTTACAAGTAAGTGGATA+GGG - chr1_4:34214059-34214078 None:intergenic 35.0%
TATCCACTTACTTGTAACAC+CGG + chr1_4:34214059-34214078 Msa0160790:CDS 35.0%
AAAATTGAGTTTAGTGGTGG+TGG + chr1_4:34214755-34214774 Msa0160790:intron 35.0%
ATTTGATTGTGTTGTAGGCT+AGG + chr1_4:34215089-34215108 Msa0160790:intron 35.0%
! GTGAAAAGGTGATAATGACA+TGG - chr1_4:34215335-34215354 None:intergenic 35.0%
!! TGTAGAGCACTTTTCTTTCT+TGG - chr1_4:34215384-34215403 None:intergenic 35.0%
ATCTGTTTAGGAGGATTTGT+AGG - chr1_4:34215630-34215649 None:intergenic 35.0%
TAAGTCAGAAAGCCAAAGAA+AGG - chr1_4:34215859-34215878 None:intergenic 35.0%
!! TCTTTGGCTTTCTGACTTAT+TGG + chr1_4:34215860-34215879 Msa0160790:intron 35.0%
TGAAAGGGAATTATTCTAGC+TGG + chr1_4:34215917-34215936 Msa0160790:intron 35.0%
! ATACTAATCCATCTTTGGGA+AGG + chr1_4:34216004-34216023 Msa0160790:intron 35.0%
GTTACCATCAACACTTTGTT+TGG + chr1_4:34216032-34216051 Msa0160790:intron 35.0%
!! GATACCAAACAAAGTGTTGA+TGG - chr1_4:34216039-34216058 None:intergenic 35.0%
ATGGGATAATGAATATAGGG+TGG + chr1_4:34216071-34216090 Msa0160790:intron 35.0%
TGGGATAATGAATATAGGGT+GGG + chr1_4:34216072-34216091 Msa0160790:intron 35.0%
ACCCAGTTAGGTTTATTGTT+TGG - chr1_4:34216131-34216150 None:intergenic 35.0%
!! TAAGGCTTTTGAGTGTTTGT+GGG + chr1_4:34216314-34216333 Msa0160790:intron 35.0%
GATTCAACAACAAATGATGC+TGG - chr1_4:34216424-34216443 None:intergenic 35.0%
AAATAATGAAAATGTGGGGG+GGG + chr1_4:34216524-34216543 Msa0160790:intron 35.0%
GTGGTCGAACATACTTATAA+TGG - chr1_4:34216607-34216626 None:intergenic 35.0%
AGTTCTTAAGCACTATCTAC+AGG - chr1_4:34216950-34216969 None:intergenic 35.0%
TGAAGGATCAGATAAATACG+GGG - chr1_4:34217003-34217022 None:intergenic 35.0%
! ATGTTCCTAAGCACTTTTGA+AGG - chr1_4:34217020-34217039 None:intergenic 35.0%
AAATTAGGCAATGTGACGAT+CGG - chr1_4:34217165-34217184 None:intergenic 35.0%
TTCTAGACTTCTGCATTGTT+TGG + chr1_4:34217210-34217229 Msa0160790:intron 35.0%
! CTGAACTACATGTACTTTTC+TGG + chr1_4:34217544-34217563 Msa0160790:intron 35.0%
TCATACACACAACTGTAGAT+AGG - chr1_4:34217650-34217669 None:intergenic 35.0%
!!! ACTTTTTAGTTACCAAGGTC+TGG + chr1_4:34218118-34218137 Msa0160790:intron 35.0%
!!! CTTTTTAGTTACCAAGGTCT+GGG + chr1_4:34218119-34218138 Msa0160790:intron 35.0%
!!! TTTTTAGTTACCAAGGTCTG+GGG + chr1_4:34218120-34218139 Msa0160790:intron 35.0%
GCTGGTATATGGAATAGAAA+AGG + chr1_4:34218142-34218161 Msa0160790:intron 35.0%
TTAAATGGAGAAGGCTGAAT+TGG - chr1_4:34218212-34218231 None:intergenic 35.0%
!!! GTTTTCTGGGGTCATAAATT+AGG - chr1_4:34218440-34218459 None:intergenic 35.0%
! ACTTAGAAGTGAGTTTTCTG+GGG - chr1_4:34218452-34218471 None:intergenic 35.0%
!! ATCATGGTTGCTATTTCCTT+TGG + chr1_4:34218534-34218553 Msa0160790:intron 35.0%
AGCTTTCATAAGACAAGGAT+TGG + chr1_4:34218562-34218581 Msa0160790:intron 35.0%
TTCATCAGCTCCTTATCTTA+AGG - chr1_4:34218740-34218759 None:intergenic 35.0%
!! AAATTAGCCTTGATTTGAGC+AGG + chr1_4:34218899-34218918 Msa0160790:three_prime_UTR 35.0%
ACACTTCCGTTACAACAGTA+CGG + chr1_4:34213607-34213626 Msa0160790:five_prime_UTR 40.0%
!!! TGTTACGCTACGGTTTTGTT+TGG - chr1_4:34213665-34213684 None:intergenic 40.0%
TAACTGTGTAAGTTGTTGGG+GGG - chr1_4:34213815-34213834 None:intergenic 40.0%
TGAACCAAACCGAAATGAAC+CGG - chr1_4:34213863-34213882 None:intergenic 40.0%
AATTCAAGGAATCATGGCTC+CGG + chr1_4:34213932-34213951 Msa0160790:CDS 40.0%
TGTTGAACTTCTTCACTCGT+CGG + chr1_4:34214010-34214029 Msa0160790:CDS 40.0%
CAAGTAAGTGGATAGGGTTT+CGG - chr1_4:34214053-34214072 None:intergenic 40.0%
! GGTGTTACAAGTAAGTGGAT+AGG - chr1_4:34214060-34214079 None:intergenic 40.0%
!! TTACCGGTGTTACAAGTAAG+TGG - chr1_4:34214065-34214084 None:intergenic 40.0%
! CGAGTTTGTGGAATTTTCTC+CGG - chr1_4:34214147-34214166 None:intergenic 40.0%
ATAGCCATAGCTTAGCAGAA+AGG + chr1_4:34214490-34214509 Msa0160790:CDS 40.0%
TAGCCATAGCTTAGCAGAAA+GGG + chr1_4:34214491-34214510 Msa0160790:CDS 40.0%
TTACCCTTTCTGCTAAGCTA+TGG - chr1_4:34214497-34214516 None:intergenic 40.0%
AATGAAACTGTTGCAAGAGC+TGG + chr1_4:34215132-34215151 Msa0160790:CDS 40.0%
!! AGAGCACTTTTCTTTCTTGG+TGG - chr1_4:34215381-34215400 None:intergenic 40.0%
AAAAATGCCCATGTTGCAGT+GGG - chr1_4:34215410-34215429 None:intergenic 40.0%
! TACGTCATGGTTTGTAGTAC+AGG + chr1_4:34215808-34215827 Msa0160790:intron 40.0%
AGCCAAAGAAAGGAACAAGA+GGG - chr1_4:34215849-34215868 None:intergenic 40.0%
AAGCCAAAGAAAGGAACAAG+AGG - chr1_4:34215850-34215869 None:intergenic 40.0%
! GAATTATTCTAGCTGGACTC+TGG + chr1_4:34215924-34215943 Msa0160790:intron 40.0%
!! TGGACTCTGGCTTTAACAAT+TGG + chr1_4:34215937-34215956 Msa0160790:intron 40.0%
TGAAATGCTGAAACCCAGTT+AGG - chr1_4:34216143-34216162 None:intergenic 40.0%
! TTTCTTCTTTGGTGGTCTCA+GGG + chr1_4:34216266-34216285 Msa0160790:intron 40.0%
!! GTAAGGCTTTTGAGTGTTTG+TGG + chr1_4:34216313-34216332 Msa0160790:intron 40.0%
!! AAGGCTTTTGAGTGTTTGTG+GGG + chr1_4:34216315-34216334 Msa0160790:intron 40.0%
AACAGGTGAAGTTGTATGTG+TGG - chr1_4:34216345-34216364 None:intergenic 40.0%
AATAATGAAAATGTGGGGGG+GGG + chr1_4:34216525-34216544 Msa0160790:intron 40.0%
CTAAATAAGGGCCGTGTTTA+AGG - chr1_4:34216677-34216696 None:intergenic 40.0%
GCTGTTCCTGATATCTGTAA+AGG - chr1_4:34216773-34216792 None:intergenic 40.0%
ACAGATATCAGGAACAGCAT+TGG + chr1_4:34216775-34216794 Msa0160790:intron 40.0%
!!! ATCAGGAACAGCATTGGTTT+TGG + chr1_4:34216781-34216800 Msa0160790:CDS 40.0%
CATTCTGTAGAGATTGCACA+TGG - chr1_4:34216820-34216839 None:intergenic 40.0%
GCAATCTCTACAGAATGAAG+TGG + chr1_4:34216823-34216842 Msa0160790:CDS 40.0%
ATCTCTACAGAATGAAGTGG+AGG + chr1_4:34216826-34216845 Msa0160790:CDS 40.0%
CAGATAAATACGGGGAAGAA+AGG - chr1_4:34216995-34217014 None:intergenic 40.0%
!! CTGATCCTTCAAAAGTGCTT+AGG + chr1_4:34217012-34217031 Msa0160790:intron 40.0%
GATCGTCACATTGCCTAATT+TGG + chr1_4:34217164-34217183 Msa0160790:intron 40.0%
GAAGCATGAAATTTCAAGCC+TGG - chr1_4:34217193-34217212 None:intergenic 40.0%
TTTCTGTTGGAACACATTGC+AGG + chr1_4:34217324-34217343 Msa0160790:intron 40.0%
!!! CTACATGTACTTTTCTGGCT+TGG + chr1_4:34217549-34217568 Msa0160790:intron 40.0%
CTACAGAGTGGAATGAATGA+CGG - chr1_4:34217926-34217945 None:intergenic 40.0%
GATGCGATGTGTATGATTTG+TGG + chr1_4:34218172-34218191 Msa0160790:intron 40.0%
ATTGTAGGGAATGTCTCTCA+TGG + chr1_4:34218280-34218299 Msa0160790:intron 40.0%
TTTCCATTGTGTGGGATTTC+TGG - chr1_4:34218344-34218363 None:intergenic 40.0%
TATGACTCATCGGCAAATTC+AGG + chr1_4:34218472-34218491 Msa0160790:three_prime_UTR 40.0%
TTATGAAAGCTCGATGCCAA+AGG - chr1_4:34218553-34218572 None:intergenic 40.0%
CATCGAGCTTTCATAAGACA+AGG + chr1_4:34218557-34218576 Msa0160790:intron 40.0%
GCACTCAAATCAGATGAAGA+TGG + chr1_4:34218801-34218820 Msa0160790:three_prime_UTR 40.0%
AGATGAAGATGGAGCTATGA+AGG + chr1_4:34218812-34218831 Msa0160790:three_prime_UTR 40.0%
GATGAAGATGGAGCTATGAA+GGG + chr1_4:34218813-34218832 Msa0160790:three_prime_UTR 40.0%
ATGAAGATGGAGCTATGAAG+GGG + chr1_4:34218814-34218833 Msa0160790:three_prime_UTR 40.0%
! CTGTTGGCTGAATAAAATCC+AGG - chr1_4:34218979-34218998 None:intergenic 40.0%
! CTGGATTTTATTCAGCCAAC+AGG + chr1_4:34218977-34218996 Msa0160790:three_prime_UTR 40.0%
TATAGGGGTCATTCAGTCTT+AGG + chr1_4:34219066-34219085 Msa0160790:three_prime_UTR 40.0%
!!! CGCTACGGTTTTGTTTGGTT+TGG - chr1_4:34213660-34213679 None:intergenic 45.0%
!! GTTCTGTGTTGGTTCTTCTC+TGG - chr1_4:34213715-34213734 None:intergenic 45.0%
AGAATGAAGGAGGGAAAGAG+GGG - chr1_4:34213791-34213810 None:intergenic 45.0%
GAGAATGAAGGAGGGAAAGA+GGG - chr1_4:34213792-34213811 None:intergenic 45.0%
AACTGTGTAAGTTGTTGGGG+GGG - chr1_4:34213814-34213833 None:intergenic 45.0%
! CAAACCGGTTCATTTCGGTT+TGG + chr1_4:34213856-34213875 Msa0160790:five_prime_UTR 45.0%
! GGTTTGGTTCAGTTGAACGA+TGG + chr1_4:34213872-34213891 Msa0160790:exon 45.0%
!! GAATTGAATCGACTCGAACG+TGG - chr1_4:34213904-34213923 None:intergenic 45.0%
AGAAGTTCAACAACCTGCGT+CGG - chr1_4:34214002-34214021 None:intergenic 45.0%
! GGAATTTTCTCCGGCGAAAA+CGG - chr1_4:34214138-34214157 None:intergenic 45.0%
TGGATGTGTCTCTGATCCAA+CGG + chr1_4:34214214-34214233 Msa0160790:CDS 45.0%
! GAATTCGTGTTTTCGACCGT+TGG - chr1_4:34214233-34214252 None:intergenic 45.0%
TCTCATGTTCTGTGAAACGC+AGG + chr1_4:34214359-34214378 Msa0160790:intron 45.0%
!! GTTTAGTGGTGGTGGATTGA+CGG + chr1_4:34214763-34214782 Msa0160790:intron 45.0%
ACCAAACCTTGTTGCAACCT+GGG - chr1_4:34215159-34215178 None:intergenic 45.0%
CAAAAATGCCCATGTTGCAG+TGG - chr1_4:34215411-34215430 None:intergenic 45.0%
AACACAGTGTGTGTGATGTG+AGG - chr1_4:34215443-34215462 None:intergenic 45.0%
TCCCCTCTTGTTCCTTTCTT+TGG + chr1_4:34215844-34215863 Msa0160790:intron 45.0%
GCCAAAGAAAGGAACAAGAG+GGG - chr1_4:34215848-34215867 None:intergenic 45.0%
GACTTATTGGAGAGACAGAG+AGG + chr1_4:34215873-34215892 Msa0160790:intron 45.0%
TTATTGGAGAGACAGAGAGG+TGG + chr1_4:34215876-34215895 Msa0160790:intron 45.0%
TATTGGAGAGACAGAGAGGT+GGG + chr1_4:34215877-34215896 Msa0160790:intron 45.0%
ATGTATTCATGGGTCCCCTA+AGG + chr1_4:34215974-34215993 Msa0160790:intron 45.0%
! ATCCATCTTTGGGAAGGTGA+TGG + chr1_4:34216010-34216029 Msa0160790:intron 45.0%
AACCATCACCTTCCCAAAGA+TGG - chr1_4:34216015-34216034 None:intergenic 45.0%
! CTTTCTTCTTTGGTGGTCTC+AGG + chr1_4:34216265-34216284 Msa0160790:intron 45.0%
ATAATGAAAATGTGGGGGGG+GGG + chr1_4:34216526-34216545 Msa0160790:intron 45.0%
CATTGCCTAATTTGGACTCC+AGG + chr1_4:34217172-34217191 Msa0160790:intron 45.0%
TCAAGCCTGGAGTCCAAATT+AGG - chr1_4:34217180-34217199 None:intergenic 45.0%
CTGCAGCTAATATGCTGTCA+AGG - chr1_4:34217454-34217473 None:intergenic 45.0%
CGTCATTCATTCCACTCTGT+AGG + chr1_4:34217924-34217943 Msa0160790:intron 45.0%
TATCATGACAGCCTACAGAG+TGG - chr1_4:34217938-34217957 None:intergenic 45.0%
GCTTAGATCATCCTCACTAG+TGG + chr1_4:34218063-34218082 Msa0160790:intron 45.0%
GCTGTCTGTTTCCATTGTGT+GGG - chr1_4:34218352-34218371 None:intergenic 45.0%
TGCTGTCTGTTTCCATTGTG+TGG - chr1_4:34218353-34218372 None:intergenic 45.0%
GACAGCAATTTCAGCAATCG+TGG + chr1_4:34218366-34218385 Msa0160790:CDS 45.0%
ATGCATTCCACCAACCACTT+TGG + chr1_4:34218396-34218415 Msa0160790:CDS 45.0%
TGCATTCCACCAACCACTTT+GGG + chr1_4:34218397-34218416 Msa0160790:CDS 45.0%
! TTTTCTTCTCTCCCCCAAAG+TGG - chr1_4:34218413-34218432 None:intergenic 45.0%
AAGGATTGGAGTGTGATGTG+AGG + chr1_4:34218576-34218595 Msa0160790:intron 45.0%
AGGATTGGAGTGTGATGTGA+GGG + chr1_4:34218577-34218596 Msa0160790:intron 45.0%
TGTTGTGCCTGCTCAAATCA+AGG - chr1_4:34218909-34218928 None:intergenic 45.0%
TGTCCTCTGTTTGTCAGAGT+CGG + chr1_4:34218945-34218964 Msa0160790:three_prime_UTR 45.0%
!! ATTAAAAATATTAATTGATA+CGG + chr1_4:34214840-34214859 Msa0160790:intron 5.0%
GAGGGGAGAAAGAAAGAGAG+TGG - chr1_4:34213774-34213793 None:intergenic 50.0%
GGAGAATGAAGGAGGGAAAG+AGG - chr1_4:34213793-34213812 None:intergenic 50.0%
CTTCACTCGTCGGAGATTAC+CGG + chr1_4:34214020-34214039 Msa0160790:CDS 50.0%
! ATAGGGTTTCGGCGGTTTTC+CGG - chr1_4:34214042-34214061 None:intergenic 50.0%
GTAAGTGGATAGGGTTTCGG+CGG - chr1_4:34214050-34214069 None:intergenic 50.0%
TCCTTCACCTGCGGTAAGTT+CGG - chr1_4:34214170-34214189 None:intergenic 50.0%
CATCCACCTTCTTCAGTCTC+CGG - chr1_4:34214200-34214219 None:intergenic 50.0%
! CGAATTCCAAGAGTGCGAAG+AGG + chr1_4:34214246-34214265 Msa0160790:CDS 50.0%
! TTCCAAGAGTGCGAAGAGGA+AGG + chr1_4:34214250-34214269 Msa0160790:CDS 50.0%
TTCCTTCCTCTTCGCACTCT+TGG - chr1_4:34214255-34214274 None:intergenic 50.0%
GAGGAAGGAACGAGAGAAGA+AGG + chr1_4:34214265-34214284 Msa0160790:CDS 50.0%
CGAACTCGAACGTGAACGTA+CGG - chr1_4:34214453-34214472 None:intergenic 50.0%
TCCCAGGTTGCAACAAGGTT+TGG + chr1_4:34215155-34215174 Msa0160790:intron 50.0%
GACCAAACCTTGTTGCAACC+TGG - chr1_4:34215160-34215179 None:intergenic 50.0%
TACAGCACCCACTGCAACAT+GGG + chr1_4:34215400-34215419 Msa0160790:intron 50.0%
TAATGAAAATGTGGGGGGGG+GGG + chr1_4:34216527-34216546 Msa0160790:intron 50.0%
GAGAGAGAGAGAGAGAGAGA+TGG + chr1_4:34217832-34217851 Msa0160790:intron 50.0%
TGGCCAGAAATCCCACACAA+TGG + chr1_4:34218338-34218357 Msa0160790:CDS 50.0%
GCATTCCACCAACCACTTTG+GGG + chr1_4:34218398-34218417 Msa0160790:CDS 50.0%
CATTCCACCAACCACTTTGG+GGG + chr1_4:34218399-34218418 Msa0160790:CDS 50.0%
! ATGAAGGGGTACAGAAGCAG+TGG + chr1_4:34218828-34218847 Msa0160790:three_prime_UTR 50.0%
! CAACCGACTCTGACAAACAG+AGG - chr1_4:34218951-34218970 None:intergenic 50.0%
CTCTGTTTGTCAGAGTCGGT+TGG + chr1_4:34218949-34218968 Msa0160790:three_prime_UTR 50.0%
TCAGAGTCGGTTGGAAAACC+TGG + chr1_4:34218958-34218977 Msa0160790:three_prime_UTR 50.0%
ATTCAGCCAACAGGCTAGCA+AGG + chr1_4:34218986-34219005 Msa0160790:three_prime_UTR 50.0%
! CTTCTTCCTTGCTAGCCTGT+TGG - chr1_4:34218995-34219014 None:intergenic 50.0%
TTGGGGGGGAGAATGAAGGA+GGG - chr1_4:34213800-34213819 None:intergenic 55.0%
GTTGTTGGGGGGGAGAATGA+AGG - chr1_4:34213804-34213823 None:intergenic 55.0%
CGGTGGTAGTTCGAGAAGTG+CGG - chr1_4:34213982-34214001 None:intergenic 55.0%
AGTTCAACAACCTGCGTCGG+TGG - chr1_4:34213999-34214018 None:intergenic 55.0%
! TTTTCCTTCCAACGCCGCGT+TGG + chr1_4:34214091-34214110 Msa0160790:CDS 55.0%
GGCGAAAACGGAGAATCTGG+CGG - chr1_4:34214126-34214145 None:intergenic 55.0%
! GCCAGATTCTCCGTTTTCGC+CGG + chr1_4:34214125-34214144 Msa0160790:CDS 55.0%
TCCGGCGAAAACGGAGAATC+TGG - chr1_4:34214129-34214148 None:intergenic 55.0%
CGGTAAGTTCGGCGAGTTTG+TGG - chr1_4:34214159-34214178 None:intergenic 55.0%
AAACTCGCCGAACTTACCGC+AGG + chr1_4:34214160-34214179 Msa0160790:CDS 55.0%
GGTAGCTCATCCTTCACCTG+CGG - chr1_4:34214179-34214198 None:intergenic 55.0%
GCAGGTGAAGGATGAGCTAC+CGG + chr1_4:34214178-34214197 Msa0160790:CDS 55.0%
GAGCTACCGGAGACTGAAGA+AGG + chr1_4:34214191-34214210 Msa0160790:CDS 55.0%
CTACCGGAGACTGAAGAAGG+TGG + chr1_4:34214194-34214213 Msa0160790:CDS 55.0%
! GTTCACGTTCGAGTTCGACG+AGG + chr1_4:34214456-34214475 Msa0160790:CDS 55.0%
CTACAGCACCCACTGCAACA+TGG + chr1_4:34215399-34215418 Msa0160790:intron 55.0%
AGAGACAGAGAGGTGGGTGT+GGG + chr1_4:34215883-34215902 Msa0160790:intron 55.0%
AATGAAAATGTGGGGGGGGG+GGG + chr1_4:34216528-34216547 Msa0160790:intron 55.0%
! TAGTTACCAAGGTCTGGGGC+TGG + chr1_4:34218124-34218143 Msa0160790:intron 55.0%
CATATACCAGCCCCAGACCT+TGG - chr1_4:34218133-34218152 None:intergenic 55.0%
! CAAGGTCTGGGGCTGGTATA+TGG + chr1_4:34218131-34218150 Msa0160790:intron 55.0%
CAGCGGGTGAAACTGCGTTA+GGG - chr1_4:34218316-34218335 None:intergenic 55.0%
ACAGCGGGTGAAACTGCGTT+AGG - chr1_4:34218317-34218336 None:intergenic 55.0%
!! TGGGATTTCTGGCCACACAG+CGG - chr1_4:34218333-34218352 None:intergenic 55.0%
CTTCTCTCCCCCAAAGTGGT+TGG - chr1_4:34218409-34218428 None:intergenic 55.0%
GAGCAGGCACAACATTCAGC+AGG + chr1_4:34218915-34218934 Msa0160790:three_prime_UTR 55.0%
GTTGGGGGGGAGAATGAAGG+AGG - chr1_4:34213801-34213820 None:intergenic 60.0%
AGGAATCATGGCTCCGGCGA+CGG + chr1_4:34213938-34213957 Msa0160790:CDS 60.0%
! GAGTTCGCTGTTTCCGTCGC+CGG - chr1_4:34213954-34213973 None:intergenic 60.0%
TCTCGAACTACCACCGACGC+AGG + chr1_4:34213986-34214005 Msa0160790:CDS 60.0%
! TCAACCAACGCGGCGTTGGA+AGG - chr1_4:34214098-34214117 None:intergenic 60.0%
GCCGAACTTACCGCAGGTGA+AGG + chr1_4:34214166-34214185 Msa0160790:CDS 60.0%
ATCGCCGCCGACGAGAATTC+CGG + chr1_4:34214411-34214430 Msa0160790:CDS 60.0%
GTTGCCGGAATTCTCGTCGG+CGG - chr1_4:34214418-34214437 None:intergenic 60.0%
GCCGACGAGAATTCCGGCAA+CGG + chr1_4:34214417-34214436 Msa0160790:CDS 60.0%
GCCGTTGCCGGAATTCTCGT+CGG - chr1_4:34214421-34214440 None:intergenic 60.0%
CTGTTGCAAGAGCTGGTCCC+AGG + chr1_4:34215139-34215158 Msa0160790:CDS 60.0%
GCTGGTCCCAGGTTGCAACA+AGG + chr1_4:34215150-34215169 Msa0160790:CDS 60.0%
GAGAGACAGAGAGGTGGGTG+TGG + chr1_4:34215882-34215901 Msa0160790:intron 60.0%
TGGGCGTGTGGGGTGTGAAA+GGG + chr1_4:34215902-34215921 Msa0160790:intron 60.0%
ATGAAAATGTGGGGGGGGGG+GGG + chr1_4:34216529-34216548 Msa0160790:intron 60.0%
!! GGGGGGGGGTGTTACCAATA+CGG + chr1_4:34216560-34216579 Msa0160790:intron 60.0%
!! GGGGGGGGTGTTACCAATAC+GGG + chr1_4:34216561-34216580 Msa0160790:intron 60.0%
ACGCAGTTTCACCCGCTGTG+TGG + chr1_4:34218318-34218337 Msa0160790:CDS 60.0%
!! GGGATTTCTGGCCACACAGC+GGG - chr1_4:34218332-34218351 None:intergenic 60.0%
CTCTCCCCCAAAGTGGTTGG+TGG - chr1_4:34218406-34218425 None:intergenic 60.0%
GCGTTCAACCAACGCGGCGT+TGG - chr1_4:34214102-34214121 None:intergenic 65.0%
CGAGAATTCCGGCAACGGCG+AGG + chr1_4:34214422-34214441 Msa0160790:CDS 65.0%
AGAGGTGGGTGTGGGCGTGT+GGG + chr1_4:34215891-34215910 Msa0160790:intron 65.0%
GTGGGCGTGTGGGGTGTGAA+AGG + chr1_4:34215901-34215920 Msa0160790:intron 65.0%
TGAAAATGTGGGGGGGGGGG+GGG + chr1_4:34216530-34216549 Msa0160790:intron 65.0%
GGCGGCGCGTTCAACCAACG+CGG - chr1_4:34214108-34214127 None:intergenic 70.0%
CGGAAGCTCCTCGCCGTTGC+CGG - chr1_4:34214433-34214452 None:intergenic 70.0%
GAGAGGTGGGTGTGGGCGTG+TGG + chr1_4:34215890-34215909 Msa0160790:intron 70.0%
GAGGTGGGTGTGGGCGTGTG+GGG + chr1_4:34215892-34215911 Msa0160790:intron 70.0%
GAAAATGTGGGGGGGGGGGG+GGG + chr1_4:34216531-34216550 Msa0160790:intron 70.0%
AAAATGTGGGGGGGGGGGGG+GGG + chr1_4:34216532-34216551 Msa0160790:intron 70.0%
AAATGTGGGGGGGGGGGGGG+GGG + chr1_4:34216533-34216552 Msa0160790:intron 75.0%
! AATGTGGGGGGGGGGGGGGG+GGG + chr1_4:34216534-34216553 Msa0160790:intron 80.0%
! ATGTGGGGGGGGGGGGGGGG+GGG + chr1_4:34216535-34216554 Msa0160790:intron 85.0%
! TGTGGGGGGGGGGGGGGGGG+GGG + chr1_4:34216536-34216555 Msa0160790:intron 90.0%
! GTGGGGGGGGGGGGGGGGGG+GGG + chr1_4:34216537-34216556 Msa0160790:intron 95.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr1_4:34216538-34216557 Msa0160790:intron 95.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 34213526 34219212 34213526 ID=Msa0160790;Name=Msa0160790
chr1_4 mRNA 34213526 34219212 34213526 ID=Msa0160790-mRNA-1;Parent=Msa0160790;Name=Msa0160790-mRNA-1;_AED=0.06;_eAED=0.06;_QI=365|1|1|1|0.83|0.71|7|464|298
chr1_4 exon 34213526 34214286 34213526 ID=Msa0160790-mRNA-1:exon:10550;Parent=Msa0160790-mRNA-1
chr1_4 exon 34214381 34214512 34214381 ID=Msa0160790-mRNA-1:exon:10551;Parent=Msa0160790-mRNA-1
chr1_4 exon 34215106 34215171 34215106 ID=Msa0160790-mRNA-1:exon:10552;Parent=Msa0160790-mRNA-1
chr1_4 exon 34216779 34216847 34216779 ID=Msa0160790-mRNA-1:exon:10553;Parent=Msa0160790-mRNA-1
chr1_4 exon 34217404 34217475 34217404 ID=Msa0160790-mRNA-1:exon:10554;Parent=Msa0160790-mRNA-1
chr1_4 exon 34218287 34218493 34218287 ID=Msa0160790-mRNA-1:exon:10555;Parent=Msa0160790-mRNA-1
chr1_4 exon 34218794 34219212 34218794 ID=Msa0160790-mRNA-1:exon:10556;Parent=Msa0160790-mRNA-1
chr1_4 five_prime_UTR 34213526 34213890 34213526 ID=Msa0160790-mRNA-1:five_prime_utr;Parent=Msa0160790-mRNA-1
chr1_4 CDS 34213891 34214286 34213891 ID=Msa0160790-mRNA-1:cds;Parent=Msa0160790-mRNA-1
chr1_4 CDS 34214381 34214512 34214381 ID=Msa0160790-mRNA-1:cds;Parent=Msa0160790-mRNA-1
chr1_4 CDS 34215106 34215171 34215106 ID=Msa0160790-mRNA-1:cds;Parent=Msa0160790-mRNA-1
chr1_4 CDS 34216779 34216847 34216779 ID=Msa0160790-mRNA-1:cds;Parent=Msa0160790-mRNA-1
chr1_4 CDS 34217404 34217475 34217404 ID=Msa0160790-mRNA-1:cds;Parent=Msa0160790-mRNA-1
chr1_4 CDS 34218287 34218448 34218287 ID=Msa0160790-mRNA-1:cds;Parent=Msa0160790-mRNA-1
chr1_4 three_prime_UTR 34218449 34218493 34218449 ID=Msa0160790-mRNA-1:three_prime_utr;Parent=Msa0160790-mRNA-1
chr1_4 three_prime_UTR 34218794 34219212 34218794 ID=Msa0160790-mRNA-1:three_prime_utr;Parent=Msa0160790-mRNA-1
Gene Sequence

>Msa0160790

ATGGAACAAACCACGTTCGAGTCGATTCAATTCAACGAAGAAATTCAAGGAATCATGGCTCCGGCGACGGAAACAGCGAACTCTTTCACCGCACTTCTCGAACTACCACCGACGCAGGTTGTTGAACTTCTTCACTCGTCGGAGATTACCGGAAAACCGCCGAAACCCTATCCACTTACTTGTAACACCGGTAATTTAACTTTTCCTTCCAACGCCGCGTTGGTTGAACGCGCCGCCAGATTCTCCGTTTTCGCCGGAGAAAATTCCACAAACTCGCCGAACTTACCGCAGGTGAAGGATGAGCTACCGGAGACTGAAGAAGGTGGATGTGTCTCTGATCCAACGGTCGAAAACACGAATTCCAAGAGTGCGAAGAGGAAGGAACGAGAGAAGAAGGTGAAATTGTCGTCTAAGAAGAGTAAGAGTATCGCCGCCGACGAGAATTCCGGCAACGGCGAGGAGCTTCCGTACGTTCACGTTCGAGTTCGACGAGGTCAAGCTACTGATAGCCATAGCTTAGCAGAAAGGGCTAGGAGAGAGAAGATAAATGCTCGAATGAAACTGTTGCAAGAGCTGGTCCCAGGTTGCAACAAGATATCAGGAACAGCATTGGTTTTGGATAAAATCATCAACCATGTGCAATCTCTACAGAATGAAGTGGAGATTTTATCAATGAAACTGGCAGCAGTTAACCCAATAATTGATTTCAACCTTGACAGCATATTAGCTGCAGAAGGAATGTCTCTCATGGACAGTAACTTCCCTAACGCAGTTTCACCCGCTGTGTGGCCAGAAATCCCACACAATGGAAACAGACAGCAATTTCAGCAATCGTGGCAATCTGATGCATTCCACCAACCACTTTGGGGGAGAGAAGAAAACAACCCTAATTTATGA
Protein sequence

>Msa0160790

MEQTTFESIQFNEEIQGIMAPATETANSFTALLELPPTQVVELLHSSEITGKPPKPYPLTCNTGNLTFPSNAALVERAARFSVFAGENSTNSPNLPQVKDELPETEEGGCVSDPTVENTNSKSAKRKEREKKVKLSSKKSKSIAADENSGNGEELPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNEVEILSMKLAAVNPIIDFNLDSILAAEGMSLMDSNFPNAVSPAVWPEIPHNGNRQQFQQSWQSDAFHQPLWGREENNPNL*