AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0069230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0069230 MtrunA17_Chr1g0199921 96.973 826 17 2 1 820 1 824 0.0 1640
Msa0069230 MtrunA17_Chr4g0012061 33.457 541 312 11 134 671 100 595 2.82e-85 286
Msa0069230 MtrunA17_Chr1g0148121 36.424 453 265 7 199 643 134 571 6.64e-82 276
Msa0069230 MtrunA17_Chr6g0465161 33.925 507 300 9 112 617 56 528 1.07e-80 274
Msa0069230 MtrunA17_Chr3g0136721 33.553 456 270 5 199 643 138 571 2.34e-80 273
Msa0069230 MtrunA17_Chr7g0230671 35.174 489 290 10 135 621 89 552 5.55e-77 263
Msa0069230 MtrunA17_Chr1g0169361 31.697 489 302 6 128 613 126 585 3.95e-76 263
Msa0069230 MtrunA17_Chr8g0382921 34.889 450 236 13 199 614 198 624 4.10e-60 217
Msa0069230 MtrunA17_Chr3g0129101 34.368 419 229 8 199 585 207 611 2.76e-58 212
Msa0069230 MtrunA17_Chr3g0120791 29.717 424 282 4 199 619 204 614 2.04e-51 192
Msa0069230 MtrunA17_Chr5g0428451 26.790 433 257 12 173 561 89 505 1.73e-31 130
Msa0069230 MtrunA17_Chr5g0433911 31.325 249 150 5 210 455 77 307 1.21e-25 112
Msa0069230 MtrunA17_Chr1g0147481 27.049 366 226 12 175 524 104 444 9.33e-22 101
Msa0069230 MtrunA17_Chr4g0057941 24.742 388 259 11 205 579 77 444 1.30e-20 96.3
Msa0069230 MtrunA17_Chr8g0360981 28.013 307 170 7 198 473 209 495 7.10e-19 91.7
Msa0069230 MtrunA17_Chr2g0281061 26.331 338 213 6 198 514 217 539 7.79e-18 88.2
Msa0069230 MtrunA17_Chr3g0113361 25.984 254 166 6 199 445 90 328 5.36e-17 85.1
Msa0069230 MtrunA17_Chr1g0193751 29.329 283 166 8 211 483 242 500 9.39e-17 84.7
Msa0069230 MtrunA17_Chr4g0048521 27.458 295 167 7 198 464 220 495 3.23e-15 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0069230 AT2G39190.2 57.927 820 312 7 1 805 1 802 0.0 960
Msa0069230 AT2G39190.1 58.537 369 134 3 1 358 1 361 3.08e-145 432
Msa0069230 AT5G24970.3 37.615 436 234 4 199 613 140 558 1.67e-88 295
Msa0069230 AT5G24970.2 37.615 436 234 4 199 613 179 597 3.90e-88 295
Msa0069230 AT5G24970.1 37.156 436 233 5 199 613 140 555 1.55e-84 285
Msa0069230 AT1G79600.1 33.673 490 296 8 135 621 96 559 7.47e-83 280
Msa0069230 AT4G31390.1 37.204 422 247 5 199 617 170 576 1.54e-81 276
Msa0069230 AT1G71810.1 32.661 545 318 11 81 617 16 519 1.41e-78 268
Msa0069230 AT3G24190.1 32.305 486 297 6 131 613 137 593 1.51e-78 270
Msa0069230 AT4G31390.2 35.782 422 228 6 199 617 170 551 1.41e-73 253
Msa0069230 AT4G31390.3 36.247 389 230 5 232 617 4 377 2.81e-71 243
Msa0069230 AT5G64940.1 33.017 421 234 9 199 585 222 628 1.35e-54 202
Msa0069230 AT5G64940.2 33.017 421 234 9 199 585 222 628 1.35e-54 202
Msa0069230 AT3G07700.1 30.287 383 253 3 199 580 193 562 3.28e-50 188
Msa0069230 AT3G07700.2 30.287 383 253 3 199 580 193 562 3.28e-50 188
Msa0069230 AT3G07700.4 30.287 383 253 3 199 580 193 562 3.28e-50 188
Msa0069230 AT3G07700.3 30.024 413 244 7 199 580 193 591 6.89e-49 185
Msa0069230 AT5G05200.1 27.913 369 232 9 173 521 90 444 6.03e-31 129
Msa0069230 AT4G24810.5 29.545 264 177 5 205 464 31 289 4.27e-24 104
Msa0069230 AT4G24810.4 29.545 264 177 5 205 464 31 289 6.02e-24 103
Msa0069230 AT4G24810.6 25.876 371 255 9 205 566 31 390 1.45e-23 105
Msa0069230 AT4G24810.1 25.876 371 255 9 205 566 31 390 1.45e-23 105
Msa0069230 AT4G24810.2 25.876 371 255 9 205 566 74 433 1.46e-23 105
Msa0069230 AT5G50330.1 26.846 298 205 7 205 496 74 364 1.49e-22 102
Msa0069230 AT4G24810.3 25.397 378 255 10 205 566 31 397 8.19e-22 99.8
Msa0069230 AT5G24810.1 26.836 354 216 11 188 524 91 418 1.93e-20 97.8
Msa0069230 AT1G65950.2 30.078 256 156 6 210 459 113 351 6.31e-20 94.4
Msa0069230 AT1G65950.1 30.078 256 156 6 210 459 113 351 1.70e-19 93.6
Msa0069230 AT1G61640.1 29.110 292 169 7 198 466 212 488 3.62e-19 92.8
Msa0069230 AT1G61640.3 29.110 292 169 7 198 466 212 488 4.55e-19 92.4
Msa0069230 AT5G50330.2 24.383 324 218 7 205 522 74 376 4.36e-18 88.6
Msa0069230 AT2G40090.1 27.165 254 163 6 199 445 92 330 1.30e-17 87.4
Msa0069230 AT4G01660.1 29.528 254 155 6 211 459 240 474 1.82e-17 87.4
Msa0069230 AT5G24810.2 25.195 385 214 12 188 524 91 449 1.79e-16 84.7
Msa0069230 AT1G11390.1 28.082 292 172 6 198 466 215 491 1.87e-16 84.3
Msa0069230 AT1G61640.2 28.505 214 138 3 198 399 212 422 1.40e-12 71.2

Find 247 sgRNAs with CRISPR-Local

Find 776 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAACATCTGAATATAATTT+TGG 0.070427 1_2:-37477375 Msa0069230:CDS
CGCTTAGGTGCATCGAATAT+TGG 0.197319 1_2:+37469753 None:intergenic
GATAATATTGTTCTCTCTTT+TGG 0.225573 1_2:+37469675 None:intergenic
CTTGGCCCCACATTTATAAA+AGG 0.243307 1_2:-37477324 Msa0069230:intron
AATGTACCAGCGGCCTTATT+TGG 0.251143 1_2:+37470865 None:intergenic
AACAAAGTCATCAACTTTCT+TGG 0.258309 1_2:+37480066 None:intergenic
AAGATTCTTGAGGAAGAATT+AGG 0.261394 1_2:-37476671 Msa0069230:CDS
ATATCCCCTTCTGCATTTAT+TGG 0.267924 1_2:+37477405 None:intergenic
TGAATATTCAGTAGAGTTTC+CGG 0.271670 1_2:+37475821 None:intergenic
AAGAAGAATCATTCGAATTT+CGG 0.277484 1_2:-37480190 Msa0069230:CDS
TGCACTTCATCAGGAGAAAT+AGG 0.278748 1_2:-37475230 Msa0069230:CDS
TCTCAAAGCGACACCATCTT+TGG 0.295707 1_2:+37470807 None:intergenic
ATATCTACATTCTTCGCCTT+GGG 0.302444 1_2:-37476382 Msa0069230:CDS
TCTATCATTTGTCTAAGATT+TGG 0.302633 1_2:-37478790 Msa0069230:CDS
CGCCTTTATGCTGATGAGCT+TGG 0.302788 1_2:-37476222 Msa0069230:CDS
TCAGGAACTGGAACAGGCCT+TGG 0.303137 1_2:-37474796 Msa0069230:intron
GCGGTCAGTATTCGGACTTC+AGG 0.303213 1_2:-37477444 Msa0069230:CDS
CCCCGATCAATCACCAAATA+AGG 0.305779 1_2:-37470878 Msa0069230:CDS
GTCGCTGTCTGAGGCTTACC+TGG 0.312293 1_2:-37469778 Msa0069230:CDS
CAGCAAATGCATTGAAGTTT+CGG 0.313861 1_2:-37476161 Msa0069230:CDS
ACCACCACGTGCCGCAAATT+AGG 0.319993 1_2:+37476410 None:intergenic
CCTCTGCTGCGGTCAGTATT+CGG 0.326971 1_2:-37477452 Msa0069230:CDS
TCCTGAGGATCATAAGTTTC+AGG 0.329741 1_2:+37478755 None:intergenic
TACTTTGCCCGTACTATTGA+TGG 0.330351 1_2:-37476461 Msa0069230:CDS
ATTTAGAGATCGGCGACTTC+GGG 0.332080 1_2:-37469922 Msa0069230:CDS
CAGGAACTGGAACAGGCCTT+GGG 0.332682 1_2:-37474795 Msa0069230:CDS
CGGAAAATTCAGGTCAATAA+AGG 0.332703 1_2:-37475326 Msa0069230:intron
GCTTAGGTGCATCGAATATT+GGG 0.343164 1_2:+37469754 None:intergenic
GCCTTTATGCTGATGAGCTT+GGG 0.344950 1_2:-37476221 Msa0069230:CDS
AGGAGGATAGCATTATCTTT+TGG 0.344966 1_2:-37469588 Msa0069230:three_prime_UTR
AAGGAAACAATGCTTAATCT+TGG 0.346515 1_2:-37477342 Msa0069230:CDS
TGTCAACGCTCTGATTGATA+TGG 0.346816 1_2:-37475018 Msa0069230:CDS
AATAAATGCAGAAGGGGATA+TGG 0.349276 1_2:-37477403 Msa0069230:CDS
CGAGCTTTGTCCGGATCATA+TGG 0.352141 1_2:-37469213 None:intergenic
CGCTCTGATTGATATGGATA+TGG 0.356251 1_2:-37475012 Msa0069230:CDS
AGAAAGTTGATGACTTTGTT+TGG 0.358358 1_2:-37480063 Msa0069230:CDS
GCCTTATTTGGTGATTGATC+GGG 0.365408 1_2:+37470877 None:intergenic
AAGTCGCCGATCTCTAAATA+AGG 0.366706 1_2:+37469926 None:intergenic
TGAATTGGATTACACTTTAG+AGG 0.372142 1_2:-37476184 Msa0069230:CDS
CTCCTTCTTGGCCTGAGCCT+TGG 0.373407 1_2:-37480000 Msa0069230:CDS
AGCAAATGCATTGAAGTTTC+GGG 0.373912 1_2:-37476160 Msa0069230:intron
TGGCCTGAGCCTTGGTATCC+AGG 0.374120 1_2:-37479992 Msa0069230:intron
GAGGGTAAAATATGTGGTAT+AGG 0.377701 1_2:-37469608 Msa0069230:three_prime_UTR
GTCGTTGTGGCCCGTACAAA+GGG 0.379758 1_2:+37480235 None:intergenic
AGAAAATTAAGAGTTGATCT+TGG 0.382686 1_2:-37469325 Msa0069230:three_prime_UTR
CTCCGTCACTCCCCTTTGTA+CGG 0.383374 1_2:-37480246 Msa0069230:CDS
ATGAAACTATACATACTTGT+AGG 0.383480 1_2:+37469487 None:intergenic
ATCTCAACACCAATGATATC+TGG 0.388598 1_2:+37477072 None:intergenic
TTGAATCGGTCCTATGTAGA+TGG 0.389192 1_2:-37469390 Msa0069230:three_prime_UTR
CCTGTAGCCGCTGCATCATT+TGG 0.392651 1_2:-37476608 Msa0069230:CDS
CCAAGGGTGATGTTGGCTAA+TGG 0.399467 1_2:-37470011 Msa0069230:CDS
TCAACTTTCTTGGCAATTTG+AGG 0.413329 1_2:+37480076 None:intergenic
AGGAATGCGGAATGCATCAT+TGG 0.415328 1_2:+37480096 None:intergenic
CTATGACCTTGCAAAGTTGT+TGG 0.416875 1_2:+37470096 None:intergenic
GGCCTTATTTGGTGATTGAT+CGG 0.417516 1_2:+37470876 None:intergenic
TTGGTTCAACTTCTTGAAAC+GGG 0.421020 1_2:-37475290 Msa0069230:CDS
TATTTAGAGATCGGCGACTT+CGG 0.421417 1_2:-37469923 Msa0069230:CDS
GCACTTCATCAGGAGAAATA+GGG 0.422863 1_2:-37475229 Msa0069230:intron
TTCATATAGTAAACGGTGAC+TGG 0.422996 1_2:-37475049 Msa0069230:CDS
GGAACTAGCAACAAAGAATC+TGG 0.428994 1_2:-37469990 Msa0069230:CDS
TGCAAATGCAAAACAAATCA+TGG 0.431494 1_2:+37469296 None:intergenic
AACTTGCGCTGCACTTCATC+AGG 0.431810 1_2:-37475239 Msa0069230:CDS
GCCCAAGCTCATCAGCATAA+AGG 0.431876 1_2:+37476220 None:intergenic
CATTCGAATTTCGGTCACTT+TGG 0.432460 1_2:-37480181 Msa0069230:CDS
AGAAGTTTCCGAACGACGTA+GGG 0.435307 1_2:+37473474 None:intergenic
AATCATTACAGCTTCAGCTT+TGG 0.437545 1_2:-37469820 Msa0069230:CDS
CCAAATGATGCAGCGGCTAC+AGG 0.437648 1_2:+37476608 None:intergenic
TTCAGCTTTGGCAAGCCATC+GGG 0.439915 1_2:-37469808 Msa0069230:CDS
CTGCCTACCCCTACGTCGTT+CGG 0.442748 1_2:-37473482 Msa0069230:CDS
GATATCTACATTCTTCGCCT+TGG 0.445130 1_2:-37476383 Msa0069230:CDS
TTCTTCTTCTTCTTACTGGA+CGG 0.447474 1_2:+37480211 None:intergenic
TTTCCATGTTCTTGAGAGTA+GGG 0.450283 1_2:-37473037 Msa0069230:CDS
TCAATAGTTCATATAGTAAA+CGG 0.452061 1_2:-37475056 Msa0069230:CDS
CTTCAGCTTTGGCAAGCCAT+CGG 0.453322 1_2:-37469809 Msa0069230:CDS
TTAGTTATTAATCTTTGAAT+CGG 0.453635 1_2:-37469404 Msa0069230:three_prime_UTR
AGAGAAGTGATTGGTAGAAG+TGG 0.453650 1_2:+37480395 None:intergenic
GCCTGAAACTTATGATCCTC+AGG 0.454026 1_2:-37478756 Msa0069230:CDS
CGGTCAGTATTCGGACTTCA+GGG 0.454624 1_2:-37477443 Msa0069230:CDS
ATTGGTTCAACTTCTTGAAA+CGG 0.457244 1_2:-37475291 Msa0069230:CDS
CATGTATGATCTGAAGGCCT+TGG 0.459446 1_2:-37478831 Msa0069230:CDS
AACAAGGAAAATATTGCATT+CGG 0.460309 1_2:-37473433 Msa0069230:intron
GGGCGGAGAGTGAAGAAGAT+TGG 0.463208 1_2:+37480288 None:intergenic
AAGTTCAGCGTCCTAATTTG+CGG 0.464669 1_2:-37476421 Msa0069230:CDS
AAGGCATCAATTCGCTATGC+TGG 0.464750 1_2:-37475081 Msa0069230:CDS
TTTGCGGCACGTGGTGGTGC+GGG 0.465918 1_2:-37476405 Msa0069230:CDS
TTCCTGATGTGAAGTTCAGC+AGG 0.467694 1_2:-37474749 Msa0069230:CDS
GACATGGAGTTTCTTAAAAG+AGG 0.468586 1_2:-37480142 Msa0069230:CDS
CAACAGTTTACCTTCGAAAG+AGG 0.469059 1_2:+37473710 None:intergenic
GCGAGGGTCACTCTTTCTCT+TGG 0.472103 1_2:+37476242 None:intergenic
CGTCGTTGTGGCCCGTACAA+AGG 0.473173 1_2:+37480234 None:intergenic
TCCACGAGGCCAGATATCAT+TGG 0.474665 1_2:-37477081 Msa0069230:CDS
ACATGGAAAGCCTTTGCCAT+TGG 0.476595 1_2:+37473051 None:intergenic
ACTCTACTGAATATTCAGAT+AGG 0.478793 1_2:-37475815 Msa0069230:CDS
TATTGTTGCAGTTCAGATCC+AGG 0.483960 1_2:-37469513 Msa0069230:three_prime_UTR
TCAATATCCAAGGGTGATGT+TGG 0.487445 1_2:-37470018 Msa0069230:CDS
CCTATGTAGATGGACTGATT+TGG 0.487509 1_2:-37469380 Msa0069230:three_prime_UTR
TAGCCGATGCATTGTGTCAA+TGG 0.489855 1_2:-37470076 Msa0069230:CDS
TGAGACCAGGGACAAATATC+CGG 0.490744 1_2:-37474989 Msa0069230:CDS
AAGAGCCACAACATGGGGTC+TGG 0.491274 1_2:+37478712 None:intergenic
ATAGCAACAGTCCTAGGAAA+AGG 0.494140 1_2:+37476695 None:intergenic
AGCCGCTGCATCATTTGGTC+AGG 0.494783 1_2:-37476603 Msa0069230:intron
GGTGCTGTCACCGTCGCCAT+GGG 0.494929 1_2:+37480268 None:intergenic
AGGTGCTGTCACCGTCGCCA+TGG 0.497583 1_2:+37480267 None:intergenic
TACTGATGCTGCGGTTCTGT+TGG 0.499622 1_2:-37469857 Msa0069230:CDS
GATACAGAGATTAAATCTGT+TGG 0.500752 1_2:+37475846 None:intergenic
ATTTGCGGCACGTGGTGGTG+CGG 0.505284 1_2:-37476406 Msa0069230:CDS
TATGCTGATGAGCTTGGGCG+AGG 0.505625 1_2:-37476216 Msa0069230:CDS
ATATTTCCTTATTTAGAGAT+CGG 0.506293 1_2:-37469932 Msa0069230:CDS
TGAAACTATACATACTTGTA+GGG 0.506365 1_2:+37469488 None:intergenic
CTTTCCATGTTCTTGAGAGT+AGG 0.507675 1_2:-37473038 Msa0069230:CDS
CATTAACACCATCAATAGTA+CGG 0.508937 1_2:+37476453 None:intergenic
CCTTATTTGGTGATTGATCG+GGG 0.510164 1_2:+37470878 None:intergenic
CGGAGAGTGAAGAAGATTGG+AGG 0.512475 1_2:+37480291 None:intergenic
GGATCATAAGTTTCAGGCAG+TGG 0.515375 1_2:+37478761 None:intergenic
GAAGTGCAGCGCAAGTTACC+AGG 0.517043 1_2:+37475245 None:intergenic
ATCTTCATAGCAACAGTCCT+AGG 0.517132 1_2:+37476689 None:intergenic
TCCTAATTTGCGGCACGTGG+TGG 0.517274 1_2:-37476411 Msa0069230:CDS
GGTGTTGTTGCATGTGAAAG+TGG 0.517465 1_2:+37480357 None:intergenic
TCACTCTCCGCCCATGGCGA+CGG 0.520900 1_2:-37480278 Msa0069230:exon
GGTAAAATATGTGGTATAGG+AGG 0.522026 1_2:-37469605 Msa0069230:three_prime_UTR
ACCCTGCTGAACTTCACATC+AGG 0.522392 1_2:+37474747 None:intergenic
CCATTAGCCAACATCACCCT+TGG 0.523566 1_2:+37470011 None:intergenic
TCCGTCACTCCCCTTTGTAC+GGG 0.523792 1_2:-37480245 Msa0069230:CDS
ACTGCATATCTCTTACGCTT+AGG 0.523975 1_2:+37469738 None:intergenic
GGTTGTTCTGTCGCTGTCTG+AGG 0.527420 1_2:-37469787 Msa0069230:CDS
GGAAGAATTAGGAGCTCCCC+TGG 0.528295 1_2:-37476660 Msa0069230:CDS
GGTACTTCTAAATCGAAAGA+AGG 0.531526 1_2:-37473078 Msa0069230:CDS
CAGTGCCAGACCCCATGTTG+TGG 0.532263 1_2:-37478717 Msa0069230:CDS
TTTACCTTCGAAAGAGGCTA+GGG 0.534132 1_2:+37473716 None:intergenic
AAGACAAGTGTATAATATGC+TGG 0.535650 1_2:+37473744 None:intergenic
AGTAAAATGAGTAATATCAA+TGG 0.536833 1_2:+37469262 None:intergenic
TTTCGGTCACTTTGGTCAAG+TGG 0.538257 1_2:-37480173 Msa0069230:CDS
CAGCGCAAGTTACCAGGATG+TGG 0.540469 1_2:+37475251 None:intergenic
ATACATACTTGTAGGGTACC+TGG 0.541187 1_2:+37469495 None:intergenic
GTTTACCTTCGAAAGAGGCT+AGG 0.541274 1_2:+37473715 None:intergenic
TCTTGAGAGTAGGGGCAACT+AGG 0.543805 1_2:-37473028 Msa0069230:intron
TGTATAAGACCCATATGATC+CGG 0.543848 1_2:+37469203 None:intergenic
TAAAGGTGTTGAAGCAACAT+TGG 0.544378 1_2:-37475309 Msa0069230:CDS
AAGGAAATATAATCATATGC+AGG 0.544409 1_2:+37469945 None:intergenic
ATACCTGGATACCAAGGCTC+AGG 0.544507 1_2:+37479989 None:intergenic
TCAAGTGGTTCGCAAGGACA+TGG 0.546032 1_2:-37480158 Msa0069230:CDS
GTGTATAATATGCTGGCATA+CGG 0.548041 1_2:+37473751 None:intergenic
TTTCTACCAATAAATGCAGA+AGG 0.548114 1_2:-37477411 Msa0069230:CDS
TTTGCTCATGTATGATCTGA+AGG 0.548209 1_2:-37478837 Msa0069230:CDS
AGTTCTGACCATGGAGTGGA+TGG 0.549599 1_2:-37475880 Msa0069230:CDS
CTTACTGGACGGCGTCGTTG+TGG 0.551146 1_2:+37480222 None:intergenic
GATTTAATCTCTGTATCTAC+CGG 0.551787 1_2:-37475840 Msa0069230:CDS
TGGAAAACGAAGTAGCTTGA+GGG 0.552817 1_2:+37480023 None:intergenic
GTAACTAGCATATGCTTCCA+AGG 0.559404 1_2:+37478814 None:intergenic
TCTTCTTCACTCTCCGCCCA+TGG 0.559733 1_2:-37480284 Msa0069230:exon
CAATGGATGATTAAATTATG+TGG 0.560480 1_2:-37470059 Msa0069230:CDS
TCGCTGTCTGAGGCTTACCT+GGG 0.560912 1_2:-37469777 Msa0069230:CDS
GCGTCCTAATTTGCGGCACG+TGG 0.562426 1_2:-37476414 Msa0069230:CDS
TACCAAGGCTCAGGCCAAGA+AGG 0.562610 1_2:+37479998 None:intergenic
GCTGTCACCGTCGCCATGGG+CGG 0.563192 1_2:+37480271 None:intergenic
TTCCTCCTTTGCCTCTGCTG+CGG 0.563229 1_2:-37477463 Msa0069230:CDS
CTTAAAAGAGGATTTAACAA+TGG 0.564765 1_2:-37480130 Msa0069230:CDS
GCCCGTACAAAGGGGAGTGA+CGG 0.564993 1_2:+37480244 None:intergenic
TATCTACATTCTTCGCCTTG+GGG 0.565780 1_2:-37476381 Msa0069230:intron
GTTGTTGATGTGTGGTTGTG+TGG 0.566396 1_2:+37480428 None:intergenic
CCAAATCAGTCCATCTACAT+AGG 0.568195 1_2:+37469380 None:intergenic
ATTAACACCATCAATAGTAC+GGG 0.568220 1_2:+37476454 None:intergenic
ACTGACCGCAGCAGAGGCAA+AGG 0.569019 1_2:+37477458 None:intergenic
TGACCTTGCAAAGTTGTTGG+CGG 0.570715 1_2:+37470099 None:intergenic
TCACAGATACTCAATATCCA+AGG 0.571533 1_2:-37470028 Msa0069230:CDS
AAGATGGTGTCGCTTTGAGA+AGG 0.574327 1_2:-37470804 Msa0069230:CDS
ATTTAACAATGGTGTTGAGT+GGG 0.578190 1_2:-37480119 Msa0069230:CDS
TGTGAGGAGGGTAAAATATG+TGG 0.578298 1_2:-37469614 Msa0069230:three_prime_UTR
AAATATCCGGCTTGTTACCA+TGG 0.579205 1_2:-37474976 Msa0069230:intron
GATATGGATATGGTGAGACC+AGG 0.579982 1_2:-37475002 Msa0069230:CDS
AGGCTCAGGCCAAGAAGGAG+TGG 0.580117 1_2:+37480003 None:intergenic
GTGCATCGAATATTGGGCCC+AGG 0.580938 1_2:+37469760 None:intergenic
TTCCATGTTCTTGAGAGTAG+GGG 0.581214 1_2:-37473036 Msa0069230:CDS
GGGGAAGTGGAATTTAAGGA+TGG 0.582098 1_2:-37474774 Msa0069230:CDS
AATGGTCTCGAAGGAGGGAA+AGG 0.583362 1_2:-37470126 Msa0069230:CDS
AGCTTCAATAATCAGAGCAA+TGG 0.583448 1_2:-37470144 Msa0069230:CDS
ATCGAAAGAAGGAGTTCCAA+TGG 0.583885 1_2:-37473067 Msa0069230:CDS
GATTTAACAATGGTGTTGAG+TGG 0.584443 1_2:-37480120 Msa0069230:CDS
TTCTACCAATAAATGCAGAA+GGG 0.585527 1_2:-37477410 Msa0069230:CDS
TGAAGGCAATTAGTGTGAGG+AGG 0.586338 1_2:-37469627 Msa0069230:three_prime_UTR
TAGAAGTTTCCGAACGACGT+AGG 0.587156 1_2:+37473473 None:intergenic
CAATCACCAAATAAGGCCGC+TGG 0.587455 1_2:-37470871 Msa0069230:CDS
AATGCAAAACAAATCATGGA+TGG 0.588081 1_2:+37469300 None:intergenic
TTTCCGAACGACGTAGGGGT+AGG 0.589875 1_2:+37473479 None:intergenic
TGTTGCTATGAAGATTCTTG+AGG 0.590651 1_2:-37476681 Msa0069230:CDS
CTTTGGTCAAGTGGTTCGCA+AGG 0.590685 1_2:-37480164 Msa0069230:CDS
TCTTGGCAATTTGAGGAATG+CGG 0.592196 1_2:+37480083 None:intergenic
CGATCCCTAGCCTCTTTCGA+AGG 0.594467 1_2:-37473720 Msa0069230:intron
TAGTGTGAGTTGTTGATGTG+TGG 0.594689 1_2:+37480420 None:intergenic
GAAGGCAATTAGTGTGAGGA+GGG 0.595248 1_2:-37469626 Msa0069230:three_prime_UTR
CATCCGCCAACAACTTTGCA+AGG 0.595666 1_2:-37470102 Msa0069230:CDS
CAGAGCAATGGTCTCGAAGG+AGG 0.596020 1_2:-37470132 Msa0069230:CDS
TCATATAGTAAACGGTGACT+GGG 0.596520 1_2:-37475048 Msa0069230:CDS
ACCAATGATATCTGGCCTCG+TGG 0.597219 1_2:+37477080 None:intergenic
TCTACCAATAAATGCAGAAG+GGG 0.597799 1_2:-37477409 Msa0069230:CDS
AGAAGGAGTTCCAATGGCAA+AGG 0.601481 1_2:-37473061 Msa0069230:CDS
ATTATACCATGGTAACAAGC+CGG 0.601997 1_2:+37474970 None:intergenic
GCATACGAAGAGCCACAACA+TGG 0.602003 1_2:+37478705 None:intergenic
AGCTCATCAGCATAAAGGCG+AGG 0.602089 1_2:+37476225 None:intergenic
GCAACAGTCCTAGGAAAAGG+AGG 0.604437 1_2:+37476698 None:intergenic
ACAAGCCGGATATTTGTCCC+TGG 0.605368 1_2:+37474984 None:intergenic
AGGAACTGGAACAGGCCTTG+GGG 0.606066 1_2:-37474794 Msa0069230:CDS
CTTTGAAGGCAATTAGTGTG+AGG 0.606295 1_2:-37469630 Msa0069230:three_prime_UTR
GGAACTGGAACAGGCCTTGG+GGG 0.606857 1_2:-37474793 Msa0069230:CDS
TTCACCGACCATCCACTCCA+TGG 0.607884 1_2:+37475872 None:intergenic
TGCCCCTACTCTCAAGAACA+TGG 0.608994 1_2:+37473034 None:intergenic
CAGAAAACTCAGCCGCAACA+AGG 0.609737 1_2:-37473449 Msa0069230:CDS
ATACACGCCGATCCACATCC+TGG 0.610436 1_2:-37475263 Msa0069230:CDS
TGATTGTGAAGAGAAGTGAT+TGG 0.610850 1_2:+37480386 None:intergenic
AATCAGAGCAATGGTCTCGA+AGG 0.613050 1_2:-37470135 Msa0069230:CDS
GTGGAAAACGAAGTAGCTTG+AGG 0.615242 1_2:+37480022 None:intergenic
CCGAATACTGACCGCAGCAG+AGG 0.615782 1_2:+37477452 None:intergenic
GTCATAAAATACTGATGCTG+CGG 0.615922 1_2:-37469866 Msa0069230:CDS
AGAGCAATGGTCTCGAAGGA+GGG 0.617538 1_2:-37470131 Msa0069230:CDS
GTGGAATACATTTACCACAC+TGG 0.619146 1_2:+37480504 None:intergenic
CATTGGTGTTGAGATGTCCA+AGG 0.619866 1_2:-37477064 Msa0069230:intron
AAGCTGTAATGATTATAACA+AGG 0.621418 1_2:+37469829 None:intergenic
AGCTGTAATGATTATAACAA+GGG 0.623250 1_2:+37469830 None:intergenic
TGCAATATCAAATGTACCAG+CGG 0.626529 1_2:+37470855 None:intergenic
AGAGAGTTCTGACCATGGAG+TGG 0.628466 1_2:-37475884 Msa0069230:CDS
GACCGCAGCAGAGGCAAAGG+AGG 0.629609 1_2:+37477461 None:intergenic
ATGATTAAATTATGTGGACA+AGG 0.630789 1_2:-37470053 Msa0069230:CDS
AAAGCGACACCATCTTTGGA+TGG 0.633807 1_2:+37470811 None:intergenic
ATTTCTCATGTTGACCAGTG+TGG 0.635075 1_2:-37480518 Msa0069230:five_prime_UTR
AAATAGTGAGCGACATCCTG+AGG 0.636549 1_2:+37478740 None:intergenic
CAAGTTACCAGGATGTGGAT+CGG 0.641080 1_2:+37475256 None:intergenic
GCTCATCAGCATAAAGGCGA+GGG 0.644522 1_2:+37476226 None:intergenic
CACAGATACTCAATATCCAA+GGG 0.646192 1_2:-37470027 Msa0069230:CDS
CAATTTCATCAACTTAACTG+TGG 0.647229 1_2:+37480485 None:intergenic
GGTATTATACCTGGATACCA+AGG 0.648103 1_2:+37479983 None:intergenic
CATCCATTGACACAATGCAT+CGG 0.650171 1_2:+37470073 None:intergenic
CAACAGTCCTAGGAAAAGGA+GGG 0.650423 1_2:+37476699 None:intergenic
TGAACTGCAACAATATCAGT+CGG 0.653389 1_2:+37469521 None:intergenic
GAAGTTTCCGAACGACGTAG+GGG 0.653962 1_2:+37473475 None:intergenic
CGTACAAAGGGGAGTGACGG+AGG 0.654757 1_2:+37480247 None:intergenic
CATACGAAGAGCCACAACAT+GGG 0.657120 1_2:+37478706 None:intergenic
ATACGAAGAGCCACAACATG+GGG 0.666082 1_2:+37478707 None:intergenic
TACCTGACCAAATGATGCAG+CGG 0.666204 1_2:+37476601 None:intergenic
CTTATTTGGTGATTGATCGG+GGG 0.668914 1_2:+37470879 None:intergenic
TGTGGCTCTTCGTATGCTCG+AGG 0.672887 1_2:-37478699 Msa0069230:intron
TCCTGATGTGAAGTTCAGCA+GGG 0.675998 1_2:-37474748 Msa0069230:intron
CTGACCATGGAGTGGATGGT+CGG 0.681835 1_2:-37475876 Msa0069230:CDS
TCGAAAGAGAGTTCTGACCA+TGG 0.684841 1_2:-37475889 Msa0069230:CDS
ATATGGATATGGTGAGACCA+GGG 0.688201 1_2:-37475001 Msa0069230:CDS
TCGTTGTGGCCCGTACAAAG+GGG 0.704631 1_2:+37480236 None:intergenic
ACAGCGACAGAACAACCCGA+TGG 0.722304 1_2:+37469793 None:intergenic
TTGGTCAGTCACTTTCCACG+AGG 0.748373 1_2:-37477095 Msa0069230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTCAATTTTTTTTCT+TGG + chr1_2:37469796-37469815 None:intergenic 10.0%
!! AATGGTATATAATTATATAT+AGG - chr1_2:37471307-37471326 Msa0069230:intron 10.0%
!! ATGGTATATAATTATATATA+GGG - chr1_2:37471308-37471327 Msa0069230:intron 10.0%
!!! ATTTTCAAAATAAAAGAAAA+AGG + chr1_2:37471454-37471473 None:intergenic 10.0%
!!! TTTCAAAATTTTGTTTATAA+GGG - chr1_2:37471507-37471526 Msa0069230:intron 10.0%
!! ATCTATCAAAAATTTAATAT+AGG + chr1_2:37472188-37472207 None:intergenic 10.0%
!! AATAAATAAAGAATAGTAAT+GGG + chr1_2:37472517-37472536 None:intergenic 10.0%
!! AAATAAATAAAGAATAGTAA+TGG + chr1_2:37472518-37472537 None:intergenic 10.0%
!!! CTTAAATGTAAAAATATTTT+TGG + chr1_2:37473846-37473865 None:intergenic 10.0%
!! ATACAATCTAAATTATTTAT+TGG - chr1_2:37476068-37476087 Msa0069230:intron 10.0%
!! ACTGATATATAAAATAAAAT+TGG + chr1_2:37477211-37477230 None:intergenic 10.0%
!!! TGTTTTAATCTTTTTAATAA+AGG - chr1_2:37477778-37477797 Msa0069230:intron 10.0%
!!! TTTAATTTTTTCAATTAAGA+GGG + chr1_2:37478091-37478110 None:intergenic 10.0%
!!! TTTTAATTTTTTCAATTAAG+AGG + chr1_2:37478092-37478111 None:intergenic 10.0%
!! ATGAAATTTATAAAAAAGAA+TGG + chr1_2:37479381-37479400 None:intergenic 10.0%
!!! AAAATTGAATTTTTTGATTG+TGG - chr1_2:37469802-37469821 Msa0069230:CDS 15.0%
!!! AAATTGAATTTTTTGATTGT+GGG - chr1_2:37469803-37469822 Msa0069230:CDS 15.0%
!!! ATATTTTGAGATATTATAGA+TGG + chr1_2:37471157-37471176 None:intergenic 15.0%
!!! GTTTCAAAATTTTGTTTATA+AGG - chr1_2:37471506-37471525 Msa0069230:intron 15.0%
!!! TTCAAAATTTTGTTTATAAG+GGG - chr1_2:37471508-37471527 Msa0069230:intron 15.0%
!!! TTTCTTAGTAAATTTTTTAG+AGG - chr1_2:37471864-37471883 Msa0069230:intron 15.0%
!! AAAATGAAAATAACTCAATA+AGG + chr1_2:37472262-37472281 None:intergenic 15.0%
!!! TTATTGAGTTATTTTCATTT+TGG - chr1_2:37472261-37472280 Msa0069230:intron 15.0%
!!! AAAACATCTGAATATAATTT+TGG - chr1_2:37472380-37472399 Msa0069230:intron 15.0%
!!! AAACATCTGAATATAATTTT+GGG - chr1_2:37472381-37472400 Msa0069230:intron 15.0%
!! AATATAATTACATGAGTAAA+AGG - chr1_2:37474140-37474159 Msa0069230:intron 15.0%
!!! AATTTTCAGTTGAATAATAA+AGG + chr1_2:37474287-37474306 None:intergenic 15.0%
!!! ATTTTTTAAACTTGTATGAT+AGG - chr1_2:37474616-37474635 Msa0069230:intron 15.0%
!! CATATAAGAATGTTATTATT+TGG + chr1_2:37474855-37474874 None:intergenic 15.0%
!!! TTATTCTATGTTTTATTTTC+AGG - chr1_2:37474941-37474960 Msa0069230:intron 15.0%
!! AAGAATAAAACATTTCTATT+AGG - chr1_2:37475201-37475220 Msa0069230:intron 15.0%
!! TGATACAAAATAATGTATAT+AGG + chr1_2:37476123-37476142 None:intergenic 15.0%
!! TTATGTTAAGAAAAATTGAT+AGG - chr1_2:37477316-37477335 Msa0069230:intron 15.0%
!! TATGTTAAGAAAAATTGATA+GGG - chr1_2:37477317-37477336 Msa0069230:intron 15.0%
!!! AATGAGAGAATTTTTTTTTA+AGG + chr1_2:37477472-37477491 None:intergenic 15.0%
!!! ATTTGGTTATGATTATTTTT+TGG - chr1_2:37477594-37477613 Msa0069230:intron 15.0%
!!! AAAATGGATTTATGTATTTT+TGG - chr1_2:37477675-37477694 Msa0069230:intron 15.0%
!!! AAATGGATTTATGTATTTTT+GGG - chr1_2:37477676-37477695 Msa0069230:intron 15.0%
!!! TTAATCTTTTTAATAAAGGA+AGG - chr1_2:37477782-37477801 Msa0069230:intron 15.0%
!! TATAACATAAATGAGTAAAT+CGG - chr1_2:37477823-37477842 Msa0069230:intron 15.0%
!! TAAATTAAGTTAAAGTTGTT+TGG + chr1_2:37477913-37477932 None:intergenic 15.0%
!!! GTTTGTTTATTTGTTATATA+TGG - chr1_2:37479142-37479161 Msa0069230:intron 15.0%
!! AAATTTATAAAAAAGAATGG+AGG + chr1_2:37479378-37479397 None:intergenic 15.0%
!! TTAGTTATTAATCTTTGAAT+CGG - chr1_2:37480351-37480370 Msa0069230:five_prime_UTR 15.0%
!!! AATTGAATTTTTTGATTGTG+GGG - chr1_2:37469804-37469823 Msa0069230:CDS 20.0%
!!! ATATATAAGCTGTTTTCATA+AGG + chr1_2:37470358-37470377 None:intergenic 20.0%
!! AATGTGATCTTCTAATTAAT+AGG + chr1_2:37470654-37470673 None:intergenic 20.0%
!! CTACAAAAGTAATTAGATAT+AGG + chr1_2:37470748-37470767 None:intergenic 20.0%
!! CTAAAAGGAAAAGTTAAAAA+AGG + chr1_2:37471181-37471200 None:intergenic 20.0%
!! ATTTAAATAAGTAGGTTACA+TGG + chr1_2:37471226-37471245 None:intergenic 20.0%
!! GTAACCTACTTATTTAAATA+TGG - chr1_2:37471227-37471246 Msa0069230:intron 20.0%
!! ATAATTATATATAGGGACAA+AGG - chr1_2:37471315-37471334 Msa0069230:intron 20.0%
!! TTGAAACTATTTACATAAAG+AGG + chr1_2:37471493-37471512 None:intergenic 20.0%
!! CTCAATTCTTATTATGTAAA+TGG + chr1_2:37471565-37471584 None:intergenic 20.0%
!! AATGAATGTAAAAAGGATAT+TGG + chr1_2:37472625-37472644 None:intergenic 20.0%
!! TCAATCAAATGAATGTAAAA+AGG + chr1_2:37472632-37472651 None:intergenic 20.0%
!! CTACATTTATTTATAAGTGT+TGG - chr1_2:37473223-37473242 Msa0069230:intron 20.0%
!!! CTTATTTGATTACATTTTCT+AGG - chr1_2:37473269-37473288 Msa0069230:intron 20.0%
!! TGTAAAAATCTTGAAAATCT+TGG - chr1_2:37474043-37474062 Msa0069230:intron 20.0%
!!! TGTTTACTTTTATTTCACAT+CGG - chr1_2:37474409-37474428 Msa0069230:intron 20.0%
!! TCAATAGTTCATATAGTAAA+CGG - chr1_2:37474699-37474718 Msa0069230:intron 20.0%
!!! CTTTAATTATGTTTAGTTTG+AGG + chr1_2:37475184-37475203 None:intergenic 20.0%
!! TTCATATATTTCACATTCTT+CGG + chr1_2:37475770-37475789 None:intergenic 20.0%
!! TTCATATATTTCACATTCTT+CGG + chr1_2:37475770-37475789 None:intergenic 20.0%
!!! TTTTCTATAAATTTTCCTGA+AGG - chr1_2:37475941-37475960 Msa0069230:CDS 20.0%
!!! TATTATTTTTCTTCTCATAG+TGG + chr1_2:37476443-37476462 None:intergenic 20.0%
!! TTGCATATTTATCAATATCT+TGG - chr1_2:37476558-37476577 Msa0069230:intron 20.0%
!!! TTTTACTTTAAAGAAGAAGT+AGG - chr1_2:37476915-37476934 Msa0069230:intron 20.0%
!!! TTTACTTTAAAGAAGAAGTA+GGG - chr1_2:37476916-37476935 Msa0069230:intron 20.0%
!!! AAAAATAAGTGACTTGTTTT+AGG + chr1_2:37476968-37476987 None:intergenic 20.0%
!! AAGAAGAAAAATGTAGTTAA+AGG - chr1_2:37476989-37477008 Msa0069230:intron 20.0%
!! ATAAAAAATTGTCTTTAGCA+GGG + chr1_2:37477082-37477101 None:intergenic 20.0%
!! AATAAAAAATTGTCTTTAGC+AGG + chr1_2:37477083-37477102 None:intergenic 20.0%
!! ATGCAAAAAATTGAATAAAC+TGG + chr1_2:37477157-37477176 None:intergenic 20.0%
!!! ATAAAAAAGAAAAGTGTCAA+CGG + chr1_2:37477375-37477394 None:intergenic 20.0%
!! TCAATAAAATCTGGATTTAT+AGG - chr1_2:37477713-37477732 Msa0069230:intron 20.0%
!!! ACTTTTTTTCCTTTCATTTT+TGG - chr1_2:37478380-37478399 Msa0069230:intron 20.0%
!!! TTACTAGGATATAGTATTTT+GGG - chr1_2:37478429-37478448 Msa0069230:intron 20.0%
!!! TTGATTTTTAAATGTGTAAG+AGG - chr1_2:37479230-37479249 Msa0069230:intron 20.0%
!!! TGAAATATTTCTTTTATGCA+TGG - chr1_2:37479574-37479593 Msa0069230:intron 20.0%
!!! ATATTTCCTTATTTAGAGAT+CGG - chr1_2:37479823-37479842 Msa0069230:intron 20.0%
!!! CTAAAACATTTTTACTTTGT+TGG + chr1_2:37480105-37480124 None:intergenic 20.0%
!!! TAAAAATGTTTTAGCTTTGA+AGG - chr1_2:37480111-37480130 Msa0069230:CDS 20.0%
!! AGTAAAATGAGTAATATCAA+TGG + chr1_2:37480496-37480515 None:intergenic 20.0%
!!! GAAAAAGAAGCATTTATTGT+TGG + chr1_2:37469422-37469441 None:intergenic 25.0%
! AAGAAGAATCATTCGAATTT+CGG - chr1_2:37469565-37469584 Msa0069230:three_prime_UTR 25.0%
! CTTAAAAGAGGATTTAACAA+TGG - chr1_2:37469625-37469644 Msa0069230:three_prime_UTR 25.0%
!!! TTTTTTCTTGGTATTATACC+TGG + chr1_2:37469784-37469803 None:intergenic 25.0%
!! TGAAAGTTTGTTTGATGAAA+TGG - chr1_2:37469858-37469877 Msa0069230:CDS 25.0%
!! GAAAGTTTGTTTGATGAAAT+GGG - chr1_2:37469859-37469878 Msa0069230:CDS 25.0%
!!! TTCAATCTTTAGAGTGTTAT+CGG - chr1_2:37470014-37470033 Msa0069230:CDS 25.0%
!!! AAAAACGTTTATCACTTTTC+GGG + chr1_2:37470132-37470151 None:intergenic 25.0%
!!! GAAAAACGTTTATCACTTTT+CGG + chr1_2:37470133-37470152 None:intergenic 25.0%
!! TATAAGCACTTAGACTTTTT+GGG - chr1_2:37470260-37470279 Msa0069230:intron 25.0%
!! TTATCTTGTTTAAGCTTTCA+AGG - chr1_2:37470329-37470348 Msa0069230:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG - chr1_2:37470425-37470444 Msa0069230:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG - chr1_2:37470426-37470445 Msa0069230:intron 25.0%
! TTTGAATTTCGCCATTATAA+GGG - chr1_2:37470606-37470625 Msa0069230:intron 25.0%
!!! AAACTTTTGGAAAATGAACT+TGG - chr1_2:37470684-37470703 Msa0069230:intron 25.0%
!!! AAGAGGTATTCTTAAAGATT+TGG - chr1_2:37470718-37470737 Msa0069230:intron 25.0%
! ATGTCTTAACTGAGATTATA+TGG - chr1_2:37470768-37470787 Msa0069230:intron 25.0%
!! TCTATCATTTGTCTAAGATT+TGG - chr1_2:37470965-37470984 Msa0069230:intron 25.0%
! GAGATATTATAGATGGAAAT+TGG + chr1_2:37471150-37471169 None:intergenic 25.0%
! AAGGCCATATTTAAATAAGT+AGG + chr1_2:37471234-37471253 None:intergenic 25.0%
! TTAAGAACTATACAATAGCT+TGG - chr1_2:37471407-37471426 Msa0069230:intron 25.0%
! ACATAACGATATAGAGTTAT+TGG - chr1_2:37471835-37471854 Msa0069230:intron 25.0%
! AAAATCTTCCAACTTCAATT+GGG + chr1_2:37472014-37472033 None:intergenic 25.0%
! GATTGCATCTATGTATTATA+TGG - chr1_2:37472050-37472069 Msa0069230:intron 25.0%
!!! CTTTTTTAAGAATTCCATGT+AGG - chr1_2:37472136-37472155 Msa0069230:intron 25.0%
!! ATGCGTTTGAAATTGATTAT+AGG - chr1_2:37472206-37472225 Msa0069230:intron 25.0%
!!! TGAGTTATTTTCATTTTGGA+AGG - chr1_2:37472265-37472284 Msa0069230:intron 25.0%
!!! ATCTGAATATAATTTTGGGT+TGG - chr1_2:37472385-37472404 Msa0069230:intron 25.0%
!!! TAATTTTGGGTTGGTTTTAA+AGG - chr1_2:37472394-37472413 Msa0069230:intron 25.0%
!! TCCTTACCTTTTATAAATGT+GGG + chr1_2:37472440-37472459 None:intergenic 25.0%
!! TACAGTTTTTAATCTAACCT+TGG + chr1_2:37472711-37472730 None:intergenic 25.0%
!! AATTTTCAGCACTAAACAAA+TGG + chr1_2:37472743-37472762 None:intergenic 25.0%
! ATTACAATCAATGTACATTC+GGG + chr1_2:37472938-37472957 None:intergenic 25.0%
! CATTACAATCAATGTACATT+CGG + chr1_2:37472939-37472958 None:intergenic 25.0%
! TAAATATTATTGGATGCATG+TGG - chr1_2:37473200-37473219 Msa0069230:intron 25.0%
!!! ATTTATAAGTGTTGGTATGA+TGG - chr1_2:37473231-37473250 Msa0069230:intron 25.0%
!!! TTTTGATGAGTTCTAGAATT+TGG - chr1_2:37473658-37473677 Msa0069230:intron 25.0%
!! TTAACATTTTGCTCTTTCAA+TGG - chr1_2:37473766-37473785 Msa0069230:CDS 25.0%
!! TAAAGGTTGATTAAGCTAAT+GGG + chr1_2:37474270-37474289 None:intergenic 25.0%
!! ATAAAGGTTGATTAAGCTAA+TGG + chr1_2:37474271-37474290 None:intergenic 25.0%
! TTCCTTCGTCAAATATATAA+AGG - chr1_2:37474593-37474612 Msa0069230:intron 25.0%
! ATCCTTTATATATTTGACGA+AGG + chr1_2:37474598-37474617 None:intergenic 25.0%
!! AAACTTGTATGATAGGTTTT+TGG - chr1_2:37474623-37474642 Msa0069230:intron 25.0%
!!! TATGATAGGTTTTTGGATTT+TGG - chr1_2:37474630-37474649 Msa0069230:intron 25.0%
!!! TATGAACAGTTTTTGTTGTA+TGG - chr1_2:37474871-37474890 Msa0069230:intron 25.0%
!!! TATGTTTTATTTTCAGGAAC+TGG - chr1_2:37474947-37474966 Msa0069230:intron 25.0%
! TGCATATTCTATTTCATTCA+AGG + chr1_2:37475151-37475170 None:intergenic 25.0%
! GAGAAAAGTTTATAAAGAGA+AGG - chr1_2:37475373-37475392 Msa0069230:intron 25.0%
! TAAAAGCCTGTTGAAATTTA+GGG + chr1_2:37475441-37475460 None:intergenic 25.0%
! ATAAAAGCCTGTTGAAATTT+AGG + chr1_2:37475442-37475461 None:intergenic 25.0%
!! ATTTCAACAGGCTTTTATAT+TGG - chr1_2:37475444-37475463 Msa0069230:intron 25.0%
!! TTTCAACAGGCTTTTATATT+GGG - chr1_2:37475445-37475464 Msa0069230:intron 25.0%
!! TTTTGTAAGAGTTGTATTAC+AGG + chr1_2:37475500-37475519 None:intergenic 25.0%
!!! AATTTTTTCATGTTTGCTCA+TGG - chr1_2:37475880-37475899 Msa0069230:CDS 25.0%
!!! ATTTGCTTTGGAACAATTTT+AGG - chr1_2:37476209-37476228 Msa0069230:CDS 25.0%
! AACAAGGAAAATATTGCATT+CGG - chr1_2:37476322-37476341 Msa0069230:intron 25.0%
! ATATGCAAAACTACAAAGAT+TGG + chr1_2:37476546-37476565 None:intergenic 25.0%
! GGAGAAAGAAAGTTTAAAAA+GGG + chr1_2:37476651-37476670 None:intergenic 25.0%
! AGGAGAAAGAAAGTTTAAAA+AGG + chr1_2:37476652-37476671 None:intergenic 25.0%
! AAAATTGCATGAAATGAACA+TGG + chr1_2:37477261-37477280 None:intergenic 25.0%
! TAACATAAAACAAAAGCTTG+AGG + chr1_2:37477304-37477323 None:intergenic 25.0%
! ATCATAACCAAATTTCAACT+CGG + chr1_2:37477587-37477606 None:intergenic 25.0%
!!! TAATTGATTTTTTTCGTGAG+TGG - chr1_2:37477626-37477645 Msa0069230:intron 25.0%
! GAGTGGAAAAAAGATAATTA+AGG - chr1_2:37477643-37477662 Msa0069230:intron 25.0%
! ATTAAGGCTATGTAGAAAAA+TGG - chr1_2:37477659-37477678 Msa0069230:intron 25.0%
!!! TATGTATTTTTGGGTTTATG+AGG - chr1_2:37477685-37477704 Msa0069230:intron 25.0%
!!! GAGGTTTTTTCAATAAAATC+TGG - chr1_2:37477704-37477723 Msa0069230:intron 25.0%
! AGATCCTATAAAAAGACTAA+GGG + chr1_2:37478004-37478023 None:intergenic 25.0%
! TAGATCCTATAAAAAGACTA+AGG + chr1_2:37478005-37478024 None:intergenic 25.0%
! TATAGATTCCTAAGTTCAAA+AGG + chr1_2:37478208-37478227 None:intergenic 25.0%
!! CTTACTAGGATATAGTATTT+TGG - chr1_2:37478428-37478447 Msa0069230:intron 25.0%
!! TACTAGGATATAGTATTTTG+GGG - chr1_2:37478430-37478449 Msa0069230:intron 25.0%
! CATTATCTCTCAAAATTATG+TGG - chr1_2:37478551-37478570 Msa0069230:intron 25.0%
! TCAAATGTTTCAGTATATGT+TGG + chr1_2:37478621-37478640 None:intergenic 25.0%
! ACATATACTGAAACATTTGA+AGG - chr1_2:37478621-37478640 Msa0069230:intron 25.0%
! TAATTTCTGTTATTGTAGCA+TGG - chr1_2:37478657-37478676 Msa0069230:intron 25.0%
! GAAAATGCATTACTTAACAA+TGG + chr1_2:37478720-37478739 None:intergenic 25.0%
! AAGAAAAAAAGATAACCAAG+AGG + chr1_2:37479053-37479072 None:intergenic 25.0%
! TATATATAGAAGGGTAACTT+AGG + chr1_2:37479471-37479490 None:intergenic 25.0%
! CAATGGATGATTAAATTATG+TGG - chr1_2:37479696-37479715 Msa0069230:intron 25.0%
! ATGATTAAATTATGTGGACA+AGG - chr1_2:37479702-37479721 Msa0069230:intron 25.0%
! AAGGAAATATAATCATATGC+AGG + chr1_2:37479813-37479832 None:intergenic 25.0%
! AGCTGTAATGATTATAACAA+GGG + chr1_2:37479928-37479947 None:intergenic 25.0%
! AAGCTGTAATGATTATAACA+AGG + chr1_2:37479929-37479948 None:intergenic 25.0%
!! GATAATATTGTTCTCTCTTT+TGG + chr1_2:37480083-37480102 None:intergenic 25.0%
!! ACACACTTACATTTTGTATA+TGG - chr1_2:37480192-37480211 Msa0069230:CDS 25.0%
!! CACACTTACATTTTGTATAT+GGG - chr1_2:37480193-37480212 Msa0069230:CDS 25.0%
!! ACACTTACATTTTGTATATG+GGG - chr1_2:37480194-37480213 Msa0069230:CDS 25.0%
! TGAAACTATACATACTTGTA+GGG + chr1_2:37480270-37480289 None:intergenic 25.0%
! ATGAAACTATACATACTTGT+AGG + chr1_2:37480271-37480290 None:intergenic 25.0%
!! AGAAAATTAAGAGTTGATCT+TGG - chr1_2:37480430-37480449 Msa0069230:five_prime_UTR 25.0%
CAATTTCATCAACTTAACTG+TGG + chr1_2:37469273-37469292 None:intergenic 30.0%
! ATTTAACAATGGTGTTGAGT+GGG - chr1_2:37469636-37469655 Msa0069230:three_prime_UTR 30.0%
AACAAAGTCATCAACTTTCT+TGG + chr1_2:37469692-37469711 None:intergenic 30.0%
!! AGAAAGTTGATGACTTTGTT+TGG - chr1_2:37469692-37469711 Msa0069230:three_prime_UTR 30.0%
TTGTTTGATGAAATGGGTAT+TGG - chr1_2:37469865-37469884 Msa0069230:CDS 30.0%
TGTTTGATGAAATGGGTATT+GGG - chr1_2:37469866-37469885 Msa0069230:CDS 30.0%
TGGCTTGAAATGATTGTTAT+AGG - chr1_2:37469928-37469947 Msa0069230:CDS 30.0%
!!! TGTTCTGTTTTTATGTGTGT+TGG - chr1_2:37469953-37469972 Msa0069230:CDS 30.0%
!!! GTTCTGTTTTTATGTGTGTT+GGG - chr1_2:37469954-37469973 Msa0069230:CDS 30.0%
! TTTTTATGTGTGTTGGGTAT+TGG - chr1_2:37469960-37469979 Msa0069230:CDS 30.0%
!! TCAATCTTTAGAGTGTTATC+GGG - chr1_2:37470015-37470034 Msa0069230:CDS 30.0%
ATAACTAGACTAACTGTGTT+CGG - chr1_2:37470068-37470087 Msa0069230:CDS 30.0%
TAACATTCCACTTCATGAAA+TGG + chr1_2:37470155-37470174 None:intergenic 30.0%
! GTATAAGCACTTAGACTTTT+TGG - chr1_2:37470259-37470278 Msa0069230:intron 30.0%
!! AGACTTTTTGGGAGATATTA+CGG - chr1_2:37470271-37470290 Msa0069230:intron 30.0%
CTTTGAATTTCGCCATTATA+AGG - chr1_2:37470605-37470624 Msa0069230:intron 30.0%
ACAAAACAACACCCTTATAA+TGG + chr1_2:37470620-37470639 None:intergenic 30.0%
TTGGAAAATGAACTTGGATT+TGG - chr1_2:37470690-37470709 Msa0069230:intron 30.0%
! TTAATCTACAAGAGTGTAGT+AGG + chr1_2:37470797-37470816 None:intergenic 30.0%
CTAAAAGACAAAGAACGAAT+AGG + chr1_2:37470882-37470901 None:intergenic 30.0%
! CTATTCGTTCTTTGTCTTTT+AGG - chr1_2:37470880-37470899 Msa0069230:CDS 30.0%
! AATTGGTTTCTGCAGATAAA+TGG - chr1_2:37471289-37471308 Msa0069230:intron 30.0%
ATATATAGGGACAAAGGTTT+AGG - chr1_2:37471321-37471340 Msa0069230:intron 30.0%
TCTTATTATGTAAATGGTCG+AGG + chr1_2:37471559-37471578 None:intergenic 30.0%
!! ATTTAGCTTGGTGGTAAATA+GGG + chr1_2:37471674-37471693 None:intergenic 30.0%
!! TATTTAGCTTGGTGGTAAAT+AGG + chr1_2:37471675-37471694 None:intergenic 30.0%
TATTTACCACCAAGCTAAAT+AGG - chr1_2:37471674-37471693 Msa0069230:intron 30.0%
AAAAAACCAATCACTAAGTG+GGG + chr1_2:37471793-37471812 None:intergenic 30.0%
CAAAAAACCAATCACTAAGT+GGG + chr1_2:37471794-37471813 None:intergenic 30.0%
TCAAAAAACCAATCACTAAG+TGG + chr1_2:37471795-37471814 None:intergenic 30.0%
GAAAATCTTCCAACTTCAAT+TGG + chr1_2:37472015-37472034 None:intergenic 30.0%
TCTATGTATTCTATCCTACA+TGG + chr1_2:37472153-37472172 None:intergenic 30.0%
TTGATTATAGGATGCTTTCT+TGG - chr1_2:37472218-37472237 Msa0069230:intron 30.0%
TTTCTACCAATAAATGCAGA+AGG - chr1_2:37472344-37472363 Msa0069230:intron 30.0%
TTCTACCAATAAATGCAGAA+GGG - chr1_2:37472345-37472364 Msa0069230:intron 30.0%
AAGGAAACAATGCTTAATCT+TGG - chr1_2:37472413-37472432 Msa0069230:intron 30.0%
! CCTTACCTTTTATAAATGTG+GGG + chr1_2:37472439-37472458 None:intergenic 30.0%
! CTCCTTACCTTTTATAAATG+TGG + chr1_2:37472441-37472460 None:intergenic 30.0%
CACATTTATAAAAGGTAAGG+AGG - chr1_2:37472439-37472458 Msa0069230:intron 30.0%
CTGAAAATTTCTTTCTTGTG+TGG - chr1_2:37472754-37472773 Msa0069230:intron 30.0%
AATTTCTTTCTTGTGTGGAA+AGG - chr1_2:37472759-37472778 Msa0069230:intron 30.0%
TAGCTATGCATCAAATTCAT+TGG - chr1_2:37472838-37472857 Msa0069230:intron 30.0%
AAGATTCTTGAGGAAGAATT+AGG - chr1_2:37473084-37473103 Msa0069230:intron 30.0%
!! ATTTTTCAGCTACATTTCTG+AGG - chr1_2:37473122-37473141 Msa0069230:intron 30.0%
ATTAACACCATCAATAGTAC+GGG + chr1_2:37473304-37473323 None:intergenic 30.0%
CATTAACACCATCAATAGTA+CGG + chr1_2:37473305-37473324 None:intergenic 30.0%
TGAATTGGATTACACTTTAG+AGG - chr1_2:37473571-37473590 Msa0069230:intron 30.0%
GATACAGAGATTAAATCTGT+TGG + chr1_2:37473912-37473931 None:intergenic 30.0%
GATTTAATCTCTGTATCTAC+CGG - chr1_2:37473915-37473934 Msa0069230:intron 30.0%
TGAATATTCAGTAGAGTTTC+CGG + chr1_2:37473937-37473956 None:intergenic 30.0%
ACTCTACTGAATATTCAGAT+AGG - chr1_2:37473940-37473959 Msa0069230:intron 30.0%
CAAAGACAAGAATGGATAAT+TGG + chr1_2:37474018-37474037 None:intergenic 30.0%
TCTTGAAAATCTTGGATGTT+TGG - chr1_2:37474051-37474070 Msa0069230:intron 30.0%
! TTTTAGTAGAATGGGTAACT+CGG + chr1_2:37474316-37474335 None:intergenic 30.0%
!! GAGTGAAGTTTTAGTAGAAT+GGG + chr1_2:37474324-37474343 None:intergenic 30.0%
!! AGAGTGAAGTTTTAGTAGAA+TGG + chr1_2:37474325-37474344 None:intergenic 30.0%
TATTTCACATCGGAAAATTC+AGG - chr1_2:37474419-37474438 Msa0069230:intron 30.0%
! ATTGGTTCAACTTCTTGAAA+CGG - chr1_2:37474464-37474483 Msa0069230:intron 30.0%
TATTTAGATTGGACAGAGAA+AGG + chr1_2:37474563-37474582 None:intergenic 30.0%
AAGCTACCAGTTATTTAGAT+TGG + chr1_2:37474574-37474593 None:intergenic 30.0%
AGAGTCATCTTTAACAAGAT+GGG - chr1_2:37475032-37475051 Msa0069230:CDS 30.0%
!! TTATGTTTAGTTTGAGGTAG+TGG + chr1_2:37475178-37475197 None:intergenic 30.0%
!! TCGGTTTTGTAAGAGTTATT+AGG + chr1_2:37475471-37475490 None:intergenic 30.0%
!! CTGAAAAGGTGTTTATAAGT+GGG + chr1_2:37475568-37475587 None:intergenic 30.0%
!! CTGAAAAGGTGTTTATAAGT+GGG + chr1_2:37475568-37475587 None:intergenic 30.0%
ATGATGGTTTCAGTTTAGAT+TGG + chr1_2:37475794-37475813 None:intergenic 30.0%
! ATAAATTTTCCTGAAGGTTC+TGG - chr1_2:37475947-37475966 Msa0069230:CDS 30.0%
! TAAATTTTCCTGAAGGTTCT+GGG - chr1_2:37475948-37475967 Msa0069230:CDS 30.0%
AAGACAAGTGTATAATATGC+TGG + chr1_2:37476014-37476033 None:intergenic 30.0%
CAAATTATGAATGGAAGAAG+AGG + chr1_2:37476194-37476213 None:intergenic 30.0%
!! CTTCCATTCATAATTTGCTT+TGG - chr1_2:37476197-37476216 Msa0069230:CDS 30.0%
GTTCCAAAGCAAATTATGAA+TGG + chr1_2:37476203-37476222 None:intergenic 30.0%
!!! CTTTGGAACAATTTTAGGTT+TGG - chr1_2:37476214-37476233 Msa0069230:CDS 30.0%
! ATGCAATATTTTCCTTGTTG+CGG + chr1_2:37476321-37476340 None:intergenic 30.0%
AGATAAGTCAAGAAAAAGAC+AGG + chr1_2:37476896-37476915 None:intergenic 30.0%
GTTAAAGGAGCTTCAATTAA+AGG - chr1_2:37477004-37477023 Msa0069230:intron 30.0%
CTTCAATTAAAGGAGTTGAA+AGG - chr1_2:37477014-37477033 Msa0069230:intron 30.0%
TGGCTTGAATGTAGATAATT+TGG + chr1_2:37477191-37477210 None:intergenic 30.0%
!! TCCTTCTGTTTCTTTTGTTT+TGG - chr1_2:37477559-37477578 Msa0069230:intron 30.0%
ACCAAAACAAAAGAAACAGA+AGG + chr1_2:37477563-37477582 None:intergenic 30.0%
TACAAAATTGCCTCAGTATT+TGG - chr1_2:37478357-37478376 Msa0069230:intron 30.0%
GAAAAAAAGTCCAAATACTG+AGG + chr1_2:37478370-37478389 None:intergenic 30.0%
AATATTCTACGCAACTTACT+AGG - chr1_2:37478414-37478433 Msa0069230:intron 30.0%
!! ACTAGGATATAGTATTTTGG+GGG - chr1_2:37478431-37478450 Msa0069230:intron 30.0%
AAGTAACTAAAACAGACCAA+AGG + chr1_2:37478756-37478775 None:intergenic 30.0%
AAAAAGATAACCAAGAGGAA+TGG + chr1_2:37479048-37479067 None:intergenic 30.0%
CAACATATACTCTCATAATC+AGG + chr1_2:37479184-37479203 None:intergenic 30.0%
AGTTCGTTATAATTGTACGT+GGG - chr1_2:37479267-37479286 Msa0069230:intron 30.0%
!! GGAAGCATCTATATATAGAA+GGG + chr1_2:37479480-37479499 None:intergenic 30.0%
!! TGGAAGCATCTATATATAGA+AGG + chr1_2:37479481-37479500 None:intergenic 30.0%
!! ATCGGTTATTTCTTGCATAA+TGG + chr1_2:37479501-37479520 None:intergenic 30.0%
AAAAAAGAAGATGAACGCAT+CGG + chr1_2:37479519-37479538 None:intergenic 30.0%
! ATATTGTTCTCTCTTTTGGT+AGG + chr1_2:37480079-37480098 None:intergenic 30.0%
! CACTTACATTTTGTATATGG+GGG - chr1_2:37480195-37480214 Msa0069230:CDS 30.0%
AATGCAAAACAAATCATGGA+TGG + chr1_2:37480458-37480477 None:intergenic 30.0%
TGCAAATGCAAAACAAATCA+TGG + chr1_2:37480462-37480481 None:intergenic 30.0%
TGATTGTGAAGAGAAGTGAT+TGG + chr1_2:37469372-37469391 None:intergenic 35.0%
TTCTTCTTCTTCTTACTGGA+CGG + chr1_2:37469547-37469566 None:intergenic 35.0%
CTTCTTCTTCTTCTTCTTAC+TGG + chr1_2:37469551-37469570 None:intergenic 35.0%
GACATGGAGTTTCTTAAAAG+AGG - chr1_2:37469613-37469632 Msa0069230:three_prime_UTR 35.0%
! GATTTAACAATGGTGTTGAG+TGG - chr1_2:37469635-37469654 Msa0069230:three_prime_UTR 35.0%
TCAACTTTCTTGGCAATTTG+AGG + chr1_2:37469682-37469701 None:intergenic 35.0%
!!! ATGGGTATTGGGTATTTTTG+TGG - chr1_2:37469877-37469896 Msa0069230:CDS 35.0%
! TTAGTTCGTTGATTGGTTCA+TGG - chr1_2:37470043-37470062 Msa0069230:CDS 35.0%
TTCGGAGTTATGGAATAAGA+CGG - chr1_2:37470086-37470105 Msa0069230:CDS 35.0%
! CGTTTTTCCATTTCATGAAG+TGG - chr1_2:37470145-37470164 Msa0069230:CDS 35.0%
TGAATGCAAAATAGCAAGTG+AGG + chr1_2:37470188-37470207 None:intergenic 35.0%
TAGCTTATTTGAGCTTACCT+TGG - chr1_2:37470237-37470256 Msa0069230:intron 35.0%
AAGTCTAAGTGCTTATACCA+AGG + chr1_2:37470257-37470276 None:intergenic 35.0%
AGTATTCCCAGTAAAATGCA+AGG + chr1_2:37470587-37470606 None:intergenic 35.0%
AAATGAACTTGGATTTGGAC+TGG - chr1_2:37470695-37470714 Msa0069230:intron 35.0%
AAACCATATCTCTCTGATCA+TGG + chr1_2:37470858-37470877 None:intergenic 35.0%
TTTGCTCATGTATGATCTGA+AGG - chr1_2:37470918-37470937 Msa0069230:CDS 35.0%
! ATTGGAAAAGAGCGTATTCA+TGG + chr1_2:37471132-37471151 None:intergenic 35.0%
ATAAGGGGTTAACAATTGCA+AGG - chr1_2:37471523-37471542 Msa0069230:intron 35.0%
!! TTTAGCTTGGTGGTAAATAG+GGG + chr1_2:37471673-37471692 None:intergenic 35.0%
! TTTAGAAGGGTGTGTATTGA+AGG - chr1_2:37471732-37471751 Msa0069230:intron 35.0%
!!! ATTTTTTAGAGGTGCTGAGT+TGG - chr1_2:37471875-37471894 Msa0069230:intron 35.0%
AGGATATTCCCAATTGAAGT+TGG - chr1_2:37472003-37472022 Msa0069230:intron 35.0%
CTCAATAAGGATACACTTCA+TGG + chr1_2:37472249-37472268 None:intergenic 35.0%
TCTACCAATAAATGCAGAAG+GGG - chr1_2:37472346-37472365 Msa0069230:intron 35.0%
ATATCCCCTTCTGCATTTAT+TGG + chr1_2:37472353-37472372 None:intergenic 35.0%
AATAAATGCAGAAGGGGATA+TGG - chr1_2:37472352-37472371 Msa0069230:intron 35.0%
CCCCACATTTATAAAAGGTA+AGG - chr1_2:37472436-37472455 Msa0069230:intron 35.0%
TGTAATGCCTATCACTTCAA+AGG - chr1_2:37472555-37472574 Msa0069230:intron 35.0%
!! CAGAAAACCTTTGAAGTGAT+AGG + chr1_2:37472565-37472584 None:intergenic 35.0%
! TCACTTCAAAGGTTTTCTGT+TGG - chr1_2:37472566-37472585 Msa0069230:intron 35.0%
! CACTTCAAAGGTTTTCTGTT+GGG - chr1_2:37472567-37472586 Msa0069230:intron 35.0%
ATCTCAACACCAATGATATC+TGG + chr1_2:37472686-37472705 None:intergenic 35.0%
! TTTCTTGTGTGGAAAGGTAT+CGG - chr1_2:37472765-37472784 Msa0069230:intron 35.0%
!!! GTATCGGCAGTTATTTTTCA+TGG - chr1_2:37472781-37472800 Msa0069230:intron 35.0%
GTAGTGAAGATGTCTGATTA+GGG - chr1_2:37472803-37472822 Msa0069230:intron 35.0%
TAGTGAAGATGTCTGATTAG+GGG - chr1_2:37472804-37472823 Msa0069230:intron 35.0%
! AGCTGTAACTCTTATTTGCA+TGG - chr1_2:37472886-37472905 Msa0069230:intron 35.0%
TCCAGTTATTCGAACTTTAG+CGG + chr1_2:37472962-37472981 None:intergenic 35.0%
TGTTGCTATGAAGATTCTTG+AGG - chr1_2:37473074-37473093 Msa0069230:CDS 35.0%
TAGCTGAAAAATGATTCCAG+GGG + chr1_2:37473114-37473133 None:intergenic 35.0%
GTAGCTGAAAAATGATTCCA+GGG + chr1_2:37473115-37473134 None:intergenic 35.0%
TGTAGCTGAAAAATGATTCC+AGG + chr1_2:37473116-37473135 None:intergenic 35.0%
ATATCTACATTCTTCGCCTT+GGG - chr1_2:37473373-37473392 Msa0069230:intron 35.0%
AAAGATCAATACAAACCCCA+AGG + chr1_2:37473392-37473411 None:intergenic 35.0%
CATGCAGGATAGAATAATAC+AGG + chr1_2:37473434-37473453 None:intergenic 35.0%
CTGTATTATTCTATCCTGCA+TGG - chr1_2:37473432-37473451 Msa0069230:intron 35.0%
CTCATTTAAGAATTCCATGC+AGG + chr1_2:37473449-37473468 None:intergenic 35.0%
CAGCAAATGCATTGAAGTTT+CGG - chr1_2:37473594-37473613 Msa0069230:intron 35.0%
AGCAAATGCATTGAAGTTTC+GGG - chr1_2:37473595-37473614 Msa0069230:intron 35.0%
! ATTGTGAACCAACGTTGATT+TGG - chr1_2:37473727-37473746 Msa0069230:CDS 35.0%
!! GATTTGTTATTGCATCATGC+AGG - chr1_2:37473788-37473807 Msa0069230:CDS 35.0%
GGCAAAAAGTAGATGCAAAA+AGG - chr1_2:37473961-37473980 Msa0069230:intron 35.0%
ACACAATGCAAAGACAAGAA+TGG + chr1_2:37474026-37474045 None:intergenic 35.0%
! TTTGGTAATCTCCTGACAAT+TGG - chr1_2:37474069-37474088 Msa0069230:intron 35.0%
ATCTCCTGACAATTGGATTA+TGG - chr1_2:37474076-37474095 Msa0069230:intron 35.0%
CGGAAAATTCAGGTCAATAA+AGG - chr1_2:37474429-37474448 Msa0069230:intron 35.0%
!! TAAAGGTGTTGAAGCAACAT+TGG - chr1_2:37474446-37474465 Msa0069230:intron 35.0%
TTGGTTCAACTTCTTGAAAC+GGG - chr1_2:37474465-37474484 Msa0069230:intron 35.0%
CTCTGTCCAATCTAAATAAC+TGG - chr1_2:37474565-37474584 Msa0069230:intron 35.0%
!!! TTTTGGTTTGCTCTGTCAAA+TGG - chr1_2:37474647-37474666 Msa0069230:intron 35.0%
TGCTCTGTCAAATGGAAAAA+AGG - chr1_2:37474655-37474674 Msa0069230:intron 35.0%
TTCATATAGTAAACGGTGAC+TGG - chr1_2:37474706-37474725 Msa0069230:intron 35.0%
TCATATAGTAAACGGTGACT+GGG - chr1_2:37474707-37474726 Msa0069230:intron 35.0%
ATTATACCATGGTAACAAGC+CGG + chr1_2:37474788-37474807 None:intergenic 35.0%
GAGATGTGAGTATTATACCA+TGG + chr1_2:37474799-37474818 None:intergenic 35.0%
TGGTATAATACTCACATCTC+AGG - chr1_2:37474799-37474818 Msa0069230:intron 35.0%
! AATACTCACATCTCAGGTTT+TGG - chr1_2:37474805-37474824 Msa0069230:intron 35.0%
!! TTATTTTCAGGAACTGGAAC+AGG - chr1_2:37474953-37474972 Msa0069230:intron 35.0%
GAGAGTCATCTTTAACAAGA+TGG - chr1_2:37475031-37475050 Msa0069230:CDS 35.0%
ACATTTCTATTAGGCTTTGC+TGG - chr1_2:37475210-37475229 Msa0069230:intron 35.0%
GAGTCATATCTATCTGATGT+GGG + chr1_2:37475351-37475370 None:intergenic 35.0%
AGAGTCATATCTATCTGATG+TGG + chr1_2:37475352-37475371 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr1_2:37475417-37475436 None:intergenic 35.0%
AAGAGTTGTATTACAGGTAC+AGG + chr1_2:37475494-37475513 None:intergenic 35.0%
!! CCTGAAAAGGTGTTTATAAG+TGG + chr1_2:37475569-37475588 None:intergenic 35.0%
! CCACTTATAAACACCTTTTC+AGG - chr1_2:37475566-37475585 Msa0069230:intron 35.0%
GAAATTGTTGAGTTCCACAT+TGG + chr1_2:37475603-37475622 None:intergenic 35.0%
!! CCTGAAAAGGTGTTTATAAG+TGG + chr1_2:37475569-37475588 None:intergenic 35.0%
! CCACTTATAAACACCTTTTC+AGG - chr1_2:37475566-37475585 Msa0069230:intron 35.0%
GAAATTGTTGAGTTCCACAT+TGG + chr1_2:37475603-37475622 None:intergenic 35.0%
! TCTTCGGACATTGATTATGA+TGG + chr1_2:37475736-37475755 None:intergenic 35.0%
TTCGGACATTGAACATTCTT+CGG + chr1_2:37475752-37475771 None:intergenic 35.0%
! TCTTCGGACATTGATTATGA+TGG + chr1_2:37475736-37475755 None:intergenic 35.0%
ATATATGAAACCAACCGCAT+AGG - chr1_2:37475837-37475856 Msa0069230:CDS 35.0%
ATCCATAGACATATCCTATG+CGG + chr1_2:37475854-37475873 None:intergenic 35.0%
GTGTATAATATGCTGGCATA+CGG + chr1_2:37476007-37476026 None:intergenic 35.0%
TGTATATTTACCCAGAACAG+TGG - chr1_2:37476348-37476367 Msa0069230:intron 35.0%
GTATATTTACCCAGAACAGT+GGG - chr1_2:37476349-37476368 Msa0069230:intron 35.0%
! TTTTATCAACCACAGTTCTG+TGG + chr1_2:37476393-37476412 None:intergenic 35.0%
TGCAAGACAGTACATGTTTA+AGG + chr1_2:37476606-37476625 None:intergenic 35.0%
AAACTTTCTTTCTCCTGTTC+AGG - chr1_2:37476656-37476675 Msa0069230:CDS 35.0%
GGTACTTCTAAATCGAAAGA+AGG - chr1_2:37476677-37476696 Msa0069230:CDS 35.0%
TTTCCATGTTCTTGAGAGTA+GGG - chr1_2:37476718-37476737 Msa0069230:CDS 35.0%
!! AACAGGCTCTAAATATAGGT+TGG + chr1_2:37476870-37476889 None:intergenic 35.0%
! ACCTATATTTAGAGCCTGTT+TGG - chr1_2:37476870-37476889 Msa0069230:intron 35.0%
TGGATACATTAGGGAAATGA+AGG + chr1_2:37477235-37477254 None:intergenic 35.0%
! ACATGGTGTTGGATACATTA+GGG + chr1_2:37477244-37477263 None:intergenic 35.0%
! AACATGGTGTTGGATACATT+AGG + chr1_2:37477245-37477264 None:intergenic 35.0%
TTCTAGACCTTCAAAAAGCT+GGG - chr1_2:37477969-37477988 Msa0069230:intron 35.0%
CAGATGGAATTGAAAACAGT+CGG + chr1_2:37478028-37478047 None:intergenic 35.0%
! ATGCATAGTACTGAGTGTTT+GGG + chr1_2:37478148-37478167 None:intergenic 35.0%
! TGCACTTTCCTTTTGAACTT+AGG - chr1_2:37478197-37478216 Msa0069230:intron 35.0%
TGATGAGCACCAAAAATGAA+AGG + chr1_2:37478392-37478411 None:intergenic 35.0%
TTCTACCAACATTGAACCTT+TGG - chr1_2:37478737-37478756 Msa0069230:CDS 35.0%
TGCAATATCAAATGTACCAG+CGG + chr1_2:37478903-37478922 None:intergenic 35.0%
! ACGATTTTACCATCCAAAGA+TGG - chr1_2:37478935-37478954 Msa0069230:intron 35.0%
CAAAGCTAGTGATAGATACA+TGG - chr1_2:37479120-37479139 Msa0069230:intron 35.0%
CACGTACAATTATAACGAAC+TGG + chr1_2:37479268-37479287 None:intergenic 35.0%
CAGTTCGTTATAATTGTACG+TGG - chr1_2:37479266-37479285 Msa0069230:intron 35.0%
! TGTTAAAGCACCCAAAAGAT+GGG + chr1_2:37479303-37479322 None:intergenic 35.0%
! ATGTTAAAGCACCCAAAAGA+TGG + chr1_2:37479304-37479323 None:intergenic 35.0%
! CTTTTATGCATGGAATGAAC+AGG - chr1_2:37479584-37479603 Msa0069230:intron 35.0%
AGCTTCAATAATCAGAGCAA+TGG - chr1_2:37479611-37479630 Msa0069230:intron 35.0%
TCACAGATACTCAATATCCA+AGG - chr1_2:37479727-37479746 Msa0069230:intron 35.0%
CACAGATACTCAATATCCAA+GGG - chr1_2:37479728-37479747 Msa0069230:intron 35.0%
! ACTTCGGGTGATATTTTCTA+AGG - chr1_2:37479848-37479867 Msa0069230:intron 35.0%
GTCATAAAATACTGATGCTG+CGG - chr1_2:37479889-37479908 Msa0069230:intron 35.0%
AATCATTACAGCTTCAGCTT+TGG - chr1_2:37479935-37479954 Msa0069230:intron 35.0%
GAGGGTAAAATATGTGGTAT+AGG - chr1_2:37480147-37480166 Msa0069230:CDS 35.0%
GGTAAAATATGTGGTATAGG+AGG - chr1_2:37480150-37480169 Msa0069230:CDS 35.0%
! AGGAGGATAGCATTATCTTT+TGG - chr1_2:37480167-37480186 Msa0069230:CDS 35.0%
TGAACTGCAACAATATCAGT+CGG + chr1_2:37480237-37480256 None:intergenic 35.0%
ATTTCTCATGTTGACCAGTG+TGG - chr1_2:37469237-37469256 Msa0069230:three_prime_UTR 40.0%
GTGGAATACATTTACCACAC+TGG + chr1_2:37469254-37469273 None:intergenic 40.0%
TAGTGTGAGTTGTTGATGTG+TGG + chr1_2:37469338-37469357 None:intergenic 40.0%
AGAGAAGTGATTGGTAGAAG+TGG + chr1_2:37469363-37469382 None:intergenic 40.0%
CATTCGAATTTCGGTCACTT+TGG - chr1_2:37469574-37469593 Msa0069230:three_prime_UTR 40.0%
TCTTGGCAATTTGAGGAATG+CGG + chr1_2:37469675-37469694 None:intergenic 40.0%
TGGAAAACGAAGTAGCTTGA+GGG + chr1_2:37469735-37469754 None:intergenic 40.0%
GGTATTATACCTGGATACCA+AGG + chr1_2:37469775-37469794 None:intergenic 40.0%
!! GGTATTGGGTATTTTTGTGG+TGG - chr1_2:37469880-37469899 Msa0069230:CDS 40.0%
! TTTGTGGTGGAACATGCTAA+TGG - chr1_2:37469893-37469912 Msa0069230:CDS 40.0%
! TTGTGGTGGAACATGCTAAT+GGG - chr1_2:37469894-37469913 Msa0069230:CDS 40.0%
! GGTCTGTTTAGTTCGTTGAT+TGG - chr1_2:37470036-37470055 Msa0069230:CDS 40.0%
ACTAACTGTGTTCGGAGTTA+TGG - chr1_2:37470076-37470095 Msa0069230:CDS 40.0%
CAAAATAAGCCAATCCAGAG+AGG + chr1_2:37470214-37470233 None:intergenic 40.0%
AGTAGCCTAGAATATGCAGA+AGG + chr1_2:37470452-37470471 None:intergenic 40.0%
TCTGCATATTCTAGGCTACT+TGG - chr1_2:37470452-37470471 Msa0069230:intron 40.0%
! TACTTGGTGGAGGTTAATGA+TGG - chr1_2:37470468-37470487 Msa0069230:intron 40.0%
! TGACTGTCCTTGCATTTTAC+TGG - chr1_2:37470577-37470596 Msa0069230:intron 40.0%
! GACTGTCCTTGCATTTTACT+GGG - chr1_2:37470578-37470597 Msa0069230:intron 40.0%
!!! CTTTGTCTTTTAGGACTGTC+TGG - chr1_2:37470889-37470908 Msa0069230:CDS 40.0%
GTAACTAGCATATGCTTCCA+AGG + chr1_2:37470944-37470963 None:intergenic 40.0%
TCCTGAGGATCATAAGTTTC+AGG + chr1_2:37471003-37471022 None:intergenic 40.0%
GCGTATTCATGGATGGAAAT+TGG + chr1_2:37471121-37471140 None:intergenic 40.0%
! GAAAAGAGCGTATTCATGGA+TGG + chr1_2:37471128-37471147 None:intergenic 40.0%
GTGTTGTGACTCAAGCTAAA+AGG + chr1_2:37471196-37471215 None:intergenic 40.0%
TAAAACGGATCACAGGACAA+AGG + chr1_2:37471253-37471272 None:intergenic 40.0%
TGATACGTAAAACGGATCAC+AGG + chr1_2:37471260-37471279 None:intergenic 40.0%
! GATCCGTTTTACGTATCAGT+AGG - chr1_2:37471262-37471281 Msa0069230:intron 40.0%
CCTCCTACTGATACGTAAAA+CGG + chr1_2:37471268-37471287 None:intergenic 40.0%
ACGTATCAGTAGGAGGTAAT+TGG - chr1_2:37471272-37471291 Msa0069230:intron 40.0%
AGAACCAAAGTGTATCATGC+AGG - chr1_2:37471353-37471372 Msa0069230:intron 40.0%
AGATGCGGTGTCTATTTAGA+AGG - chr1_2:37471718-37471737 Msa0069230:intron 40.0%
GATGCGGTGTCTATTTAGAA+GGG - chr1_2:37471719-37471738 Msa0069230:intron 40.0%
AAACGAGTGATGTGTAGTTG+CGG - chr1_2:37471928-37471947 Msa0069230:intron 40.0%
CTTGGCCCCACATTTATAAA+AGG - chr1_2:37472431-37472450 Msa0069230:intron 40.0%
CATTTGATTGACGATGCAGT+TGG - chr1_2:37472641-37472660 Msa0069230:intron 40.0%
GGTAGTGAAGATGTCTGATT+AGG - chr1_2:37472802-37472821 Msa0069230:intron 40.0%
TGTACATTCGGGACACAAAA+AGG + chr1_2:37472927-37472946 None:intergenic 40.0%
TTTGATTGCGTTCTTCTTGC+AGG - chr1_2:37473008-37473027 Msa0069230:intron 40.0%
! ATCAAATCCCTCCTTTTCCT+AGG - chr1_2:37473049-37473068 Msa0069230:CDS 40.0%
ATAGCAACAGTCCTAGGAAA+AGG + chr1_2:37473063-37473082 None:intergenic 40.0%
ATCTTCATAGCAACAGTCCT+AGG + chr1_2:37473069-37473088 None:intergenic 40.0%
TACTTTGCCCGTACTATTGA+TGG - chr1_2:37473294-37473313 Msa0069230:intron 40.0%
AAGTTCAGCGTCCTAATTTG+CGG - chr1_2:37473334-37473353 Msa0069230:intron 40.0%
GATATCTACATTCTTCGCCT+TGG - chr1_2:37473372-37473391 Msa0069230:intron 40.0%
TATCTACATTCTTCGCCTTG+GGG - chr1_2:37473374-37473393 Msa0069230:intron 40.0%
ATCTTAACCATCTCCTCAGT+TGG - chr1_2:37473472-37473491 Msa0069230:CDS 40.0%
TCTTAACCATCTCCTCAGTT+GGG - chr1_2:37473473-37473492 Msa0069230:CDS 40.0%
!! AAAAAGGCGTCTACTTGATC+TGG - chr1_2:37473977-37473996 Msa0069230:intron 40.0%
CCTACCATAATCCAATTGTC+AGG + chr1_2:37474083-37474102 None:intergenic 40.0%
CCTGACAATTGGATTATGGT+AGG - chr1_2:37474080-37474099 Msa0069230:intron 40.0%
ATGACTCTAGATCTGGATTG+AGG - chr1_2:37474218-37474237 Msa0069230:intron 40.0%
TGATTAAGCTAATGGGAGGT+TGG + chr1_2:37474263-37474282 None:intergenic 40.0%
! AGGTTGATTAAGCTAATGGG+AGG + chr1_2:37474267-37474286 None:intergenic 40.0%
TGCACTTCATCAGGAGAAAT+AGG - chr1_2:37474525-37474544 Msa0069230:intron 40.0%
GCACTTCATCAGGAGAAATA+GGG - chr1_2:37474526-37474545 Msa0069230:intron 40.0%
TGTCAACGCTCTGATTGATA+TGG - chr1_2:37474737-37474756 Msa0069230:intron 40.0%
CGCTCTGATTGATATGGATA+TGG - chr1_2:37474743-37474762 Msa0069230:intron 40.0%
ATATGGATATGGTGAGACCA+GGG - chr1_2:37474754-37474773 Msa0069230:CDS 40.0%
!! AAATATCCGGCTTGTTACCA+TGG - chr1_2:37474779-37474798 Msa0069230:CDS 40.0%
GCGTGAACATAAGCTTAAGA+AGG + chr1_2:37474904-37474923 None:intergenic 40.0%
CAGCAATGAAAGCAAACCAA+AGG + chr1_2:37475283-37475302 None:intergenic 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG - chr1_2:37475313-37475332 Msa0069230:CDS 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG - chr1_2:37475314-37475333 Msa0069230:CDS 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr1_2:37475415-37475434 Msa0069230:intron 40.0%
GTTAGGCCCTAAATTTCAAC+AGG - chr1_2:37475432-37475451 Msa0069230:intron 40.0%
GTTGTATTACAGGTACAGGT+CGG + chr1_2:37475490-37475509 None:intergenic 40.0%
ACATCTCTCACTTTACAGGT+CGG + chr1_2:37475523-37475542 None:intergenic 40.0%
GGGAGACATCTCTTATAAGT+GGG + chr1_2:37475548-37475567 None:intergenic 40.0%
TGGGAGACATCTCTTATAAG+TGG + chr1_2:37475549-37475568 None:intergenic 40.0%
GTTCCACATTGGATGAGATA+GGG + chr1_2:37475592-37475611 None:intergenic 40.0%
AGTTCCACATTGGATGAGAT+AGG + chr1_2:37475593-37475612 None:intergenic 40.0%
ACATCTCTCACTTTACAGGT+CGG + chr1_2:37475523-37475542 None:intergenic 40.0%
GTTCCACATTGGATGAGATA+GGG + chr1_2:37475592-37475611 None:intergenic 40.0%
AGTTCCACATTGGATGAGAT+AGG + chr1_2:37475593-37475612 None:intergenic 40.0%
ATAGACATATCCTATGCGGT+TGG + chr1_2:37475850-37475869 None:intergenic 40.0%
AACCGCATAGGATATGTCTA+TGG - chr1_2:37475849-37475868 Msa0069230:CDS 40.0%
AAATCTTTCCCAGAACCTTC+AGG + chr1_2:37475959-37475978 None:intergenic 40.0%
TTTACCTTCGAAAGAGGCTA+GGG + chr1_2:37476042-37476061 None:intergenic 40.0%
CAACAGTTTACCTTCGAAAG+AGG + chr1_2:37476048-37476067 None:intergenic 40.0%
AAAGACTCAGGATCTAGTCA+TGG + chr1_2:37476418-37476437 None:intergenic 40.0%
! CTCATAGTGGAAAAAGACTC+AGG + chr1_2:37476430-37476449 None:intergenic 40.0%
!! CGATTTAGAAGTACCTGAAC+AGG + chr1_2:37476672-37476691 None:intergenic 40.0%
ATCGAAAGAAGGAGTTCCAA+TGG - chr1_2:37476688-37476707 Msa0069230:CDS 40.0%
CTTTCCATGTTCTTGAGAGT+AGG - chr1_2:37476717-37476736 Msa0069230:CDS 40.0%
TTCCATGTTCTTGAGAGTAG+GGG - chr1_2:37476719-37476738 Msa0069230:CDS 40.0%
GTATGTCAAAGTGCATGTCA+GGG - chr1_2:37476749-37476768 Msa0069230:intron 40.0%
!! GCCAAACAGGCTCTAAATAT+AGG + chr1_2:37476874-37476893 None:intergenic 40.0%
AAGAAAAAGACAGGCCAAAC+AGG + chr1_2:37476887-37476906 None:intergenic 40.0%
AAGTAGGGCCAAACAACATT+TGG - chr1_2:37476931-37476950 Msa0069230:intron 40.0%
AGTAGGGCCAAACAACATTT+GGG - chr1_2:37476932-37476951 Msa0069230:intron 40.0%
AGCTTCTCCCAAATGTTGTT+TGG + chr1_2:37476942-37476961 None:intergenic 40.0%
GCATGAAATGAACATGGTGT+TGG + chr1_2:37477255-37477274 None:intergenic 40.0%
!! TTTGGTGCCGAGTTGAAATT+TGG - chr1_2:37477577-37477596 Msa0069230:intron 40.0%
CTTCTAGACCTTCAAAAAGC+TGG - chr1_2:37477968-37477987 Msa0069230:intron 40.0%
! AAAAAGACTAAGGGTGCGTT+TGG + chr1_2:37477995-37478014 None:intergenic 40.0%
!! CGCACCCTTAGTCTTTTTAT+AGG - chr1_2:37477997-37478016 Msa0069230:intron 40.0%
! GATGCATAGTACTGAGTGTT+TGG + chr1_2:37478149-37478168 None:intergenic 40.0%
CATTACTGCATAGGAAACAC+AGG + chr1_2:37478179-37478198 None:intergenic 40.0%
! AGGAAAGTGCATTACTGCAT+AGG + chr1_2:37478188-37478207 None:intergenic 40.0%
TGCTATAATGCACTCTCCTT+TGG - chr1_2:37478240-37478259 Msa0069230:intron 40.0%
GCTATAATGCACTCTCCTTT+GGG - chr1_2:37478241-37478260 Msa0069230:intron 40.0%
GACAACATGCTTTAACCCAA+AGG + chr1_2:37478259-37478278 None:intergenic 40.0%
TGGGTTAAAGCATGTTGTCA+AGG - chr1_2:37478260-37478279 Msa0069230:intron 40.0%
TGTTGTCAAGGAGCTTAGTT+AGG - chr1_2:37478272-37478291 Msa0069230:intron 40.0%
TGCTTTCTGTGTTACAACAG+TGG + chr1_2:37478328-37478347 None:intergenic 40.0%
TGGGGGATATTAAGTTTAGC+AGG - chr1_2:37478448-37478467 Msa0069230:intron 40.0%
TAGCAGGTGTTCACTCAATT+AGG - chr1_2:37478464-37478483 Msa0069230:intron 40.0%
ACAGACCAAAGGTTCAATGT+TGG + chr1_2:37478745-37478764 None:intergenic 40.0%
CATACTTCTGATACCTTGTC+AGG - chr1_2:37478816-37478835 Msa0069230:CDS 40.0%
TTCTGATACCTTGTCAGGAA+AGG - chr1_2:37478821-37478840 Msa0069230:CDS 40.0%
! CTTATTTGGTGATTGATCGG+GGG + chr1_2:37478879-37478898 None:intergenic 40.0%
! CCTTATTTGGTGATTGATCG+GGG + chr1_2:37478880-37478899 None:intergenic 40.0%
!! GCCTTATTTGGTGATTGATC+GGG + chr1_2:37478881-37478900 None:intergenic 40.0%
!! GGCCTTATTTGGTGATTGAT+CGG + chr1_2:37478882-37478901 None:intergenic 40.0%
! AAGCAAGATAGAGAGCATGT+AGG + chr1_2:37478999-37479018 None:intergenic 40.0%
! GATTTTGTCACCATTCCTCT+TGG - chr1_2:37479035-37479054 Msa0069230:intron 40.0%
! GTTAAAGCACCCAAAAGATG+GGG + chr1_2:37479302-37479321 None:intergenic 40.0%
CGTTCATCTTCGTAAACACT+TGG - chr1_2:37479550-37479569 Msa0069230:intron 40.0%
TATGCATGGAATGAACAGGA+CGG - chr1_2:37479588-37479607 Msa0069230:intron 40.0%
CTATGACCTTGCAAAGTTGT+TGG + chr1_2:37479662-37479681 None:intergenic 40.0%
CATCCATTGACACAATGCAT+CGG + chr1_2:37479685-37479704 None:intergenic 40.0%
TCAATATCCAAGGGTGATGT+TGG - chr1_2:37479737-37479756 Msa0069230:intron 40.0%
GGAACTAGCAACAAAGAATC+TGG - chr1_2:37479765-37479784 Msa0069230:intron 40.0%
AAGTCGCCGATCTCTAAATA+AGG + chr1_2:37479832-37479851 None:intergenic 40.0%
TATTTAGAGATCGGCGACTT+CGG - chr1_2:37479832-37479851 Msa0069230:intron 40.0%
GCTTAGGTGCATCGAATATT+GGG + chr1_2:37480004-37480023 None:intergenic 40.0%
ACTGCATATCTCTTACGCTT+AGG + chr1_2:37480020-37480039 None:intergenic 40.0%
! CTTTGAAGGCAATTAGTGTG+AGG - chr1_2:37480125-37480144 Msa0069230:CDS 40.0%
TGTGAGGAGGGTAAAATATG+TGG - chr1_2:37480141-37480160 Msa0069230:CDS 40.0%
TATTGTTGCAGTTCAGATCC+AGG - chr1_2:37480242-37480261 Msa0069230:CDS 40.0%
! ATACATACTTGTAGGGTACC+TGG + chr1_2:37480263-37480282 None:intergenic 40.0%
TTGAATCGGTCCTATGTAGA+TGG - chr1_2:37480365-37480384 Msa0069230:five_prime_UTR 40.0%
CCAAATCAGTCCATCTACAT+AGG + chr1_2:37480378-37480397 None:intergenic 40.0%
!! CCTATGTAGATGGACTGATT+TGG - chr1_2:37480375-37480394 Msa0069230:five_prime_UTR 40.0%
!! CATTTTAGACGAGCTTTGTC+CGG - chr1_2:37480533-37480552 Msa0069230:five_prime_UTR 40.0%
GTTGTTGATGTGTGGTTGTG+TGG + chr1_2:37469330-37469349 None:intergenic 45.0%
!! GGTGTTGTTGCATGTGAAAG+TGG + chr1_2:37469401-37469420 None:intergenic 45.0%
! TTTCGGTCACTTTGGTCAAG+TGG - chr1_2:37469582-37469601 Msa0069230:three_prime_UTR 45.0%
AGGAATGCGGAATGCATCAT+TGG + chr1_2:37469662-37469681 None:intergenic 45.0%
GTGGAAAACGAAGTAGCTTG+AGG + chr1_2:37469736-37469755 None:intergenic 45.0%
! CTTCGTTTTCCACTCCTTCT+TGG - chr1_2:37469743-37469762 Msa0069230:CDS 45.0%
TTGTGGGGTGTGCTTATACA+TGG - chr1_2:37469819-37469838 Msa0069230:CDS 45.0%
! GCTAATGGGTAGTGTGTGAT+TGG - chr1_2:37469908-37469927 Msa0069230:CDS 45.0%
! TTTTGCATTCACGACCTCTC+TGG - chr1_2:37470197-37470216 Msa0069230:intron 45.0%
AATATGCAGAAGGCCCTGTT+TGG + chr1_2:37470442-37470461 None:intergenic 45.0%
GCATATTCTAGGCTACTTGG+TGG - chr1_2:37470455-37470474 Msa0069230:intron 45.0%
! TATTCTAGGCTACTTGGTGG+AGG - chr1_2:37470458-37470477 Msa0069230:intron 45.0%
! ACTTGGATTTGGACTGGAAG+AGG - chr1_2:37470701-37470720 Msa0069230:intron 45.0%
GCACCATGATCAGAGAGATA+TGG - chr1_2:37470852-37470871 Msa0069230:CDS 45.0%
!!! TCTTTTAGGACTGTCTGGAG+TGG - chr1_2:37470894-37470913 Msa0069230:CDS 45.0%
CATGTATGATCTGAAGGCCT+TGG - chr1_2:37470924-37470943 Msa0069230:intron 45.0%
GGATCATAAGTTTCAGGCAG+TGG + chr1_2:37470997-37471016 None:intergenic 45.0%
GCCTGAAACTTATGATCCTC+AGG - chr1_2:37470999-37471018 Msa0069230:intron 45.0%
AAATAGTGAGCGACATCCTG+AGG + chr1_2:37471018-37471037 None:intergenic 45.0%
ATACGAAGAGCCACAACATG+GGG + chr1_2:37471051-37471070 None:intergenic 45.0%
CATACGAAGAGCCACAACAT+GGG + chr1_2:37471052-37471071 None:intergenic 45.0%
! CCGTTTTACGTATCAGTAGG+AGG - chr1_2:37471265-37471284 Msa0069230:intron 45.0%
ATAGGGACAAAGGTTTAGGC+AGG - chr1_2:37471325-37471344 Msa0069230:intron 45.0%
! ATCTTTTTACGCCACAGTGG+GGG + chr1_2:37471702-37471721 None:intergenic 45.0%
! CATCTTTTTACGCCACAGTG+GGG + chr1_2:37471703-37471722 None:intergenic 45.0%
! GCATCTTTTTACGCCACAGT+GGG + chr1_2:37471704-37471723 None:intergenic 45.0%
CACTGTGGCGTAAAAAGATG+CGG - chr1_2:37471703-37471722 Msa0069230:intron 45.0%
CCACAAAAAGCAGAGAGAGA+GGG + chr1_2:37471769-37471788 None:intergenic 45.0%
!!! CCTCTCTCTCTGCTTTTTGT+GGG - chr1_2:37471767-37471786 Msa0069230:intron 45.0%
!!! TTTTAGAGGTGCTGAGTTGG+AGG - chr1_2:37471878-37471897 Msa0069230:intron 45.0%
AACGAGTGATGTGTAGTTGC+GGG - chr1_2:37471929-37471948 Msa0069230:intron 45.0%
! AGAGCATCCACAATGTCGAT+GGG + chr1_2:37471983-37472002 None:intergenic 45.0%
! TAGAGCATCCACAATGTCGA+TGG + chr1_2:37471984-37472003 None:intergenic 45.0%
ATCGACATTGTGGATGCTCT+AGG - chr1_2:37471983-37472002 Msa0069230:intron 45.0%
!! CATTGGTGTTGAGATGTCCA+AGG - chr1_2:37472691-37472710 Msa0069230:intron 45.0%
GCCGCTAAAGTTCGAATAAC+TGG - chr1_2:37472958-37472977 Msa0069230:intron 45.0%
CAACAGTCCTAGGAAAAGGA+GGG + chr1_2:37473059-37473078 None:intergenic 45.0%
TACCTGACCAAATGATGCAG+CGG + chr1_2:37473157-37473176 None:intergenic 45.0%
CTTAACCATCTCCTCAGTTG+GGG - chr1_2:37473474-37473493 Msa0069230:CDS 45.0%
GCCTTTATGCTGATGAGCTT+GGG - chr1_2:37473534-37473553 Msa0069230:intron 45.0%
!!! GCGAGGTTTTGTTGGTGAAT+TGG - chr1_2:37473556-37473575 Msa0069230:intron 45.0%
GTCAGACACCAAATCAACGT+TGG + chr1_2:37473738-37473757 None:intergenic 45.0%
! TCGAAAGAGAGTTCTGACCA+TGG - chr1_2:37473866-37473885 Msa0069230:intron 45.0%
ACTCTAGATCTGGATTGAGG+TGG - chr1_2:37474221-37474240 Msa0069230:intron 45.0%
CAAGTTACCAGGATGTGGAT+CGG + chr1_2:37474502-37474521 None:intergenic 45.0%
! AAGGCATCAATTCGCTATGC+TGG - chr1_2:37474674-37474693 Msa0069230:intron 45.0%
GATATGGATATGGTGAGACC+AGG - chr1_2:37474753-37474772 Msa0069230:CDS 45.0%
TGAGACCAGGGACAAATATC+CGG - chr1_2:37474766-37474785 Msa0069230:CDS 45.0%
CTTAAATTCCACTTCCCCCA+AGG + chr1_2:37474979-37474998 None:intergenic 45.0%
CTTGGGGGAAGTGGAATTTA+AGG - chr1_2:37474977-37474996 Msa0069230:CDS 45.0%
GGGGAAGTGGAATTTAAGGA+TGG - chr1_2:37474981-37475000 Msa0069230:CDS 45.0%
TTCCTGATGTGAAGTTCAGC+AGG - chr1_2:37475006-37475025 Msa0069230:CDS 45.0%
TCCTGATGTGAAGTTCAGCA+GGG - chr1_2:37475007-37475026 Msa0069230:CDS 45.0%
TGGAAATTCCGCCTTCATTG+CGG - chr1_2:37475230-37475249 Msa0069230:CDS 45.0%
CAAACCAAAGGCCGCAATTT+AGG + chr1_2:37475271-37475290 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG + chr1_2:37475306-37475325 None:intergenic 45.0%
CTCCAACACCTTCATTGTGT+TGG - chr1_2:37475304-37475323 Msa0069230:CDS 45.0%
! AGCCAACACAATGAAGGTGT+TGG + chr1_2:37475309-37475328 None:intergenic 45.0%
CCTCAAAGCCAACACAATGA+AGG + chr1_2:37475315-37475334 None:intergenic 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG - chr1_2:37475312-37475331 Msa0069230:CDS 45.0%
!! TCATTGTGTTGGCTTTGAGG+GGG - chr1_2:37475315-37475334 Msa0069230:CDS 45.0%
CCTTACAAAACCGGCATGTA+AGG + chr1_2:37475408-37475427 None:intergenic 45.0%
!!! CCTTACATGCCGGTTTTGTA+AGG - chr1_2:37475405-37475424 Msa0069230:intron 45.0%
GGAGACATCTCTCACTTTAC+AGG + chr1_2:37475527-37475546 None:intergenic 45.0%
GGAGACATCTCTCACTTTAC+AGG + chr1_2:37475527-37475546 None:intergenic 45.0%
GTTTACCTTCGAAAGAGGCT+AGG + chr1_2:37476043-37476062 None:intergenic 45.0%
AGAAGTTTCCGAACGACGTA+GGG + chr1_2:37476284-37476303 None:intergenic 45.0%
TAGAAGTTTCCGAACGACGT+AGG + chr1_2:37476285-37476304 None:intergenic 45.0%
GTCACAAATCCCACTGTTCT+GGG + chr1_2:37476361-37476380 None:intergenic 45.0%
TATCAACCACAGTTCTGTGG+TGG + chr1_2:37476390-37476409 None:intergenic 45.0%
AGAAGGAGTTCCAATGGCAA+AGG - chr1_2:37476694-37476713 Msa0069230:CDS 45.0%
ACATGGAAAGCCTTTGCCAT+TGG + chr1_2:37476707-37476726 None:intergenic 45.0%
GGTATGTCAAAGTGCATGTC+AGG - chr1_2:37476748-37476767 Msa0069230:intron 45.0%
TCTTTAGCAGGGTTCGAAGA+TGG + chr1_2:37477071-37477090 None:intergenic 45.0%
AGCTTGAGGTAAGAGCTTGA+GGG + chr1_2:37477290-37477309 None:intergenic 45.0%
AAGCTTGAGGTAAGAGCTTG+AGG + chr1_2:37477291-37477310 None:intergenic 45.0%
CAAGGAGCTTAGTTAGGTGT+AGG - chr1_2:37478278-37478297 Msa0069230:intron 45.0%
ATCGAGAGAGGCTTGGATAT+AGG - chr1_2:37478301-37478320 Msa0069230:intron 45.0%
TCGAGAGAGGCTTGGATATA+GGG - chr1_2:37478302-37478321 Msa0069230:intron 45.0%
CCCCGATCAATCACCAAATA+AGG - chr1_2:37478877-37478896 Msa0069230:intron 45.0%
!! AATGTACCAGCGGCCTTATT+TGG + chr1_2:37478893-37478912 None:intergenic 45.0%
AAAGCGACACCATCTTTGGA+TGG + chr1_2:37478947-37478966 None:intergenic 45.0%
TCTCAAAGCGACACCATCTT+TGG + chr1_2:37478951-37478970 None:intergenic 45.0%
!! AAGATGGTGTCGCTTTGAGA+AGG - chr1_2:37478951-37478970 Msa0069230:intron 45.0%
! CGACAATTGCCCCATCTTTT+GGG - chr1_2:37479290-37479309 Msa0069230:intron 45.0%
AATCAGAGCAATGGTCTCGA+AGG - chr1_2:37479620-37479639 Msa0069230:intron 45.0%
TGACCTTGCAAAGTTGTTGG+CGG + chr1_2:37479659-37479678 None:intergenic 45.0%
TAGCCGATGCATTGTGTCAA+TGG - chr1_2:37479679-37479698 Msa0069230:intron 45.0%
ATTTAGAGATCGGCGACTTC+GGG - chr1_2:37479833-37479852 Msa0069230:intron 45.0%
CGCTTAGGTGCATCGAATAT+TGG + chr1_2:37480005-37480024 None:intergenic 45.0%
TGAAGGCAATTAGTGTGAGG+AGG - chr1_2:37480128-37480147 Msa0069230:CDS 45.0%
GAAGGCAATTAGTGTGAGGA+GGG - chr1_2:37480129-37480148 Msa0069230:CDS 45.0%
!!! ATTTTTTTTTTTTAAACTTT+TGG - chr1_2:37470671-37470690 Msa0069230:intron 5.0%
!! ACAATATAATTAAATATTAT+TGG - chr1_2:37473190-37473209 Msa0069230:intron 5.0%
!! TGATAAAAAATTTAAAAATA+TGG + chr1_2:37476826-37476845 None:intergenic 5.0%
!! TTAATTAAATAATAAACAAT+TGG + chr1_2:37478124-37478143 None:intergenic 5.0%
CGGAGAGTGAAGAAGATTGG+AGG + chr1_2:37469467-37469486 None:intergenic 50.0%
CTTTGGTCAAGTGGTTCGCA+AGG - chr1_2:37469591-37469610 Msa0069230:three_prime_UTR 50.0%
TCAAGTGGTTCGCAAGGACA+TGG - chr1_2:37469597-37469616 Msa0069230:three_prime_UTR 50.0%
ATACCTGGATACCAAGGCTC+AGG + chr1_2:37469769-37469788 None:intergenic 50.0%
CATTCACGACCTCTCTGGAT+TGG - chr1_2:37470202-37470221 Msa0069230:intron 50.0%
CAGGGCCTTCTGCATATTCT+AGG - chr1_2:37470444-37470463 Msa0069230:intron 50.0%
TGCAAGGACAGTCAGCAGAA+CGG + chr1_2:37470571-37470590 None:intergenic 50.0%
GCATACGAAGAGCCACAACA+TGG + chr1_2:37471053-37471072 None:intergenic 50.0%
CTTCGTATGCTCGAGGTAGT+TGG - chr1_2:37471063-37471082 Msa0069230:intron 50.0%
CCTGCCTGCATGATACACTT+TGG + chr1_2:37471360-37471379 None:intergenic 50.0%
CCAAAGTGTATCATGCAGGC+AGG - chr1_2:37471357-37471376 Msa0069230:intron 50.0%
TGCCCCACAACATCCACAAT+AGG - chr1_2:37471639-37471658 Msa0069230:intron 50.0%
GCCCCACAACATCCACAATA+GGG - chr1_2:37471640-37471659 Msa0069230:intron 50.0%
CCCCTATTGTGGATGTTGTG+GGG + chr1_2:37471644-37471663 None:intergenic 50.0%
CCCCACAACATCCACAATAG+GGG - chr1_2:37471641-37471660 Msa0069230:intron 50.0%
CCCCCTATTGTGGATGTTGT+GGG + chr1_2:37471645-37471664 None:intergenic 50.0%
CCCACAACATCCACAATAGG+GGG - chr1_2:37471642-37471661 Msa0069230:intron 50.0%
ACCCCCTATTGTGGATGTTG+TGG + chr1_2:37471646-37471665 None:intergenic 50.0%
! CGCATCTTTTTACGCCACAG+TGG + chr1_2:37471705-37471724 None:intergenic 50.0%
CAGAGAGAGAGGGAGAGAAA+TGG + chr1_2:37471759-37471778 None:intergenic 50.0%
!!! CCCTCTCTCTCTGCTTTTTG+TGG - chr1_2:37471766-37471785 Msa0069230:intron 50.0%
CCCACAAAAAGCAGAGAGAG+AGG + chr1_2:37471770-37471789 None:intergenic 50.0%
! GGTGCTGAGTTGGAGGAATT+AGG - chr1_2:37471885-37471904 Msa0069230:intron 50.0%
ACCCACTTAGGCACCCAAAA+GGG - chr1_2:37471952-37471971 Msa0069230:intron 50.0%
!! TCCCTTTTGGGTGCCTAAGT+GGG + chr1_2:37471956-37471975 None:intergenic 50.0%
GAGCATCCACAATGTCGATG+GGG + chr1_2:37471982-37472001 None:intergenic 50.0%
CGGTCAGTATTCGGACTTCA+GGG - chr1_2:37472312-37472331 Msa0069230:intron 50.0%
! TTGGTCAGTCACTTTCCACG+AGG - chr1_2:37472660-37472679 Msa0069230:intron 50.0%
TCCACGAGGCCAGATATCAT+TGG - chr1_2:37472674-37472693 Msa0069230:intron 50.0%
ACCAATGATATCTGGCCTCG+TGG + chr1_2:37472678-37472697 None:intergenic 50.0%
GCAACAGTCCTAGGAAAAGG+AGG + chr1_2:37473060-37473079 None:intergenic 50.0%
GCTCATCAGCATAAAGGCGA+GGG + chr1_2:37473532-37473551 None:intergenic 50.0%
AGCTCATCAGCATAAAGGCG+AGG + chr1_2:37473533-37473552 None:intergenic 50.0%
CGCCTTTATGCTGATGAGCT+TGG - chr1_2:37473533-37473552 Msa0069230:intron 50.0%
GCCCAAGCTCATCAGCATAA+AGG + chr1_2:37473538-37473557 None:intergenic 50.0%
! AGAGAGTTCTGACCATGGAG+TGG - chr1_2:37473871-37473890 Msa0069230:intron 50.0%
! AGTTCTGACCATGGAGTGGA+TGG - chr1_2:37473875-37473894 Msa0069230:intron 50.0%
CTAGATCTGGATTGAGGTGG+TGG - chr1_2:37474224-37474243 Msa0069230:intron 50.0%
AACTTGCGCTGCACTTCATC+AGG - chr1_2:37474516-37474535 Msa0069230:intron 50.0%
ACAAGCCGGATATTTGTCCC+TGG + chr1_2:37474774-37474793 None:intergenic 50.0%
ACCCTGCTGAACTTCACATC+AGG + chr1_2:37475011-37475030 None:intergenic 50.0%
CAAAACCGGCATGTAAGGTG+AGG + chr1_2:37475403-37475422 None:intergenic 50.0%
GGATGAGATAGGGCCTGAAA+AGG + chr1_2:37475582-37475601 None:intergenic 50.0%
AGGCCCTATCTCATCCAATG+TGG - chr1_2:37475586-37475605 Msa0069230:intron 50.0%
GGATGAGATAGGGCCTGAAA+AGG + chr1_2:37475582-37475601 None:intergenic 50.0%
AGGCCCTATCTCATCCAATG+TGG - chr1_2:37475586-37475605 Msa0069230:intron 50.0%
GAAGTTTCCGAACGACGTAG+GGG + chr1_2:37476283-37476302 None:intergenic 50.0%
CAGAAAACTCAGCCGCAACA+AGG - chr1_2:37476306-37476325 Msa0069230:intron 50.0%
GGTCACAAATCCCACTGTTC+TGG + chr1_2:37476362-37476381 None:intergenic 50.0%
!! CACAGTTCTGTGGTGGACTA+TGG + chr1_2:37476383-37476402 None:intergenic 50.0%
CATAGTCCACCACAGAACTG+TGG - chr1_2:37476381-37476400 Msa0069230:intron 50.0%
TGCCCCTACTCTCAAGAACA+TGG + chr1_2:37476724-37476743 None:intergenic 50.0%
TCTTGAGAGTAGGGGCAACT+AGG - chr1_2:37476727-37476746 Msa0069230:CDS 50.0%
! CGTTTGGCCCAGCTTTTTGA+AGG + chr1_2:37477979-37477998 None:intergenic 50.0%
GTTAGGTGTAGGATCGAGAG+AGG - chr1_2:37478289-37478308 Msa0069230:intron 50.0%
GTTGCAAGCCTTTCCTGACA+AGG + chr1_2:37478832-37478851 None:intergenic 50.0%
CAATCACCAAATAAGGCCGC+TGG - chr1_2:37478884-37478903 Msa0069230:intron 50.0%
! GCGACAATTGCCCCATCTTT+TGG - chr1_2:37479289-37479308 Msa0069230:intron 50.0%
AGAGCAATGGTCTCGAAGGA+GGG - chr1_2:37479624-37479643 Msa0069230:intron 50.0%
AATGGTCTCGAAGGAGGGAA+AGG - chr1_2:37479629-37479648 Msa0069230:intron 50.0%
CATCCGCCAACAACTTTGCA+AGG - chr1_2:37479653-37479672 Msa0069230:intron 50.0%
CCATTAGCCAACATCACCCT+TGG + chr1_2:37479747-37479766 None:intergenic 50.0%
! CCAAGGGTGATGTTGGCTAA+TGG - chr1_2:37479744-37479763 Msa0069230:intron 50.0%
TACTGATGCTGCGGTTCTGT+TGG - chr1_2:37479898-37479917 Msa0069230:intron 50.0%
! CTTCAGCTTTGGCAAGCCAT+CGG - chr1_2:37479946-37479965 Msa0069230:intron 50.0%
! TTCAGCTTTGGCAAGCCATC+GGG - chr1_2:37479947-37479966 Msa0069230:intron 50.0%
GGGCGGAGAGTGAAGAAGAT+TGG + chr1_2:37469470-37469489 None:intergenic 55.0%
TCTTCTTCACTCTCCGCCCA+TGG - chr1_2:37469471-37469490 Msa0069230:three_prime_UTR 55.0%
CTCCGTCACTCCCCTTTGTA+CGG - chr1_2:37469509-37469528 Msa0069230:three_prime_UTR 55.0%
TCCGTCACTCCCCTTTGTAC+GGG - chr1_2:37469510-37469529 Msa0069230:three_prime_UTR 55.0%
TCGTTGTGGCCCGTACAAAG+GGG + chr1_2:37469522-37469541 None:intergenic 55.0%
GTCGTTGTGGCCCGTACAAA+GGG + chr1_2:37469523-37469542 None:intergenic 55.0%
TACCAAGGCTCAGGCCAAGA+AGG + chr1_2:37469760-37469779 None:intergenic 55.0%
AAGAGCCACAACATGGGGTC+TGG + chr1_2:37471046-37471065 None:intergenic 55.0%
TGTGGCTCTTCGTATGCTCG+AGG - chr1_2:37471056-37471075 Msa0069230:intron 55.0%
AGGGGAAGAACCCCCTATTG+TGG + chr1_2:37471655-37471674 None:intergenic 55.0%
!! GGGGAGCCTATTTAGCTTGG+TGG + chr1_2:37471683-37471702 None:intergenic 55.0%
GTGGGGGAGCCTATTTAGCT+TGG + chr1_2:37471686-37471705 None:intergenic 55.0%
CTAAATAGGCTCCCCCACTG+TGG - chr1_2:37471688-37471707 Msa0069230:intron 55.0%
TGTGGGCCCCACTTAGTGAT+TGG - chr1_2:37471784-37471803 Msa0069230:intron 55.0%
TGTAGTTGCGGGACCCACTT+AGG - chr1_2:37471940-37471959 Msa0069230:intron 55.0%
GACCCACTTAGGCACCCAAA+AGG - chr1_2:37471951-37471970 Msa0069230:intron 55.0%
!! CTCCCTTTTGGGTGCCTAAG+TGG + chr1_2:37471957-37471976 None:intergenic 55.0%
! TCGATGGGGCTCTCCCTTTT+GGG + chr1_2:37471968-37471987 None:intergenic 55.0%
TTCCTCCTTTGCCTCTGCTG+CGG - chr1_2:37472292-37472311 Msa0069230:intron 55.0%
CCTCTGCTGCGGTCAGTATT+CGG - chr1_2:37472303-37472322 Msa0069230:intron 55.0%
GCGGTCAGTATTCGGACTTC+AGG - chr1_2:37472311-37472330 Msa0069230:intron 55.0%
GGAAGAATTAGGAGCTCCCC+TGG - chr1_2:37473095-37473114 Msa0069230:intron 55.0%
CCAAATGATGCAGCGGCTAC+AGG + chr1_2:37473150-37473169 None:intergenic 55.0%
CCTGTAGCCGCTGCATCATT+TGG - chr1_2:37473147-37473166 Msa0069230:intron 55.0%
AGCCGCTGCATCATTTGGTC+AGG - chr1_2:37473152-37473171 Msa0069230:intron 55.0%
! TCCTAATTTGCGGCACGTGG+TGG - chr1_2:37473344-37473363 Msa0069230:intron 55.0%
ACCACCACGTGCCGCAAATT+AGG + chr1_2:37473348-37473367 None:intergenic 55.0%
! TTTTGCAGCAGCCCCAACTG+AGG + chr1_2:37473488-37473507 None:intergenic 55.0%
GCGAGGGTCACTCTTTCTCT+TGG + chr1_2:37473516-37473535 None:intergenic 55.0%
TATGCTGATGAGCTTGGGCG+AGG - chr1_2:37473539-37473558 Msa0069230:intron 55.0%
!! GAGCTTGGGCGAGGTTTTGT+TGG - chr1_2:37473548-37473567 Msa0069230:intron 55.0%
CTGACCATGGAGTGGATGGT+CGG - chr1_2:37473879-37473898 Msa0069230:intron 55.0%
TTCACCGACCATCCACTCCA+TGG + chr1_2:37473886-37473905 None:intergenic 55.0%
ATACACGCCGATCCACATCC+TGG - chr1_2:37474492-37474511 Msa0069230:intron 55.0%
CAGCGCAAGTTACCAGGATG+TGG + chr1_2:37474507-37474526 None:intergenic 55.0%
GAAGTGCAGCGCAAGTTACC+AGG + chr1_2:37474513-37474532 None:intergenic 55.0%
TCAGGAACTGGAACAGGCCT+TGG - chr1_2:37474959-37474978 Msa0069230:intron 55.0%
CAGGAACTGGAACAGGCCTT+GGG - chr1_2:37474960-37474979 Msa0069230:intron 55.0%
AGGAACTGGAACAGGCCTTG+GGG - chr1_2:37474961-37474980 Msa0069230:intron 55.0%
CAATTTAGGCGACTAGGGGC+GGG + chr1_2:37475257-37475276 None:intergenic 55.0%
GCAATTTAGGCGACTAGGGG+CGG + chr1_2:37475258-37475277 None:intergenic 55.0%
GCCCCTAGTCGCCTAAATTG+CGG - chr1_2:37475257-37475276 Msa0069230:CDS 55.0%
GCCGCAATTTAGGCGACTAG+GGG + chr1_2:37475261-37475280 None:intergenic 55.0%
GGCCGCAATTTAGGCGACTA+GGG + chr1_2:37475262-37475281 None:intergenic 55.0%
AGGCCGCAATTTAGGCGACT+AGG + chr1_2:37475263-37475282 None:intergenic 55.0%
GTCGCCTAAATTGCGGCCTT+TGG - chr1_2:37475264-37475283 Msa0069230:CDS 55.0%
!! TTGTGTTGGCTTTGAGGGGG+TGG - chr1_2:37475318-37475337 Msa0069230:intron 55.0%
GCACTCCTCACCTTACATGC+CGG - chr1_2:37475395-37475414 Msa0069230:intron 55.0%
CGATCCCTAGCCTCTTTCGA+AGG - chr1_2:37476035-37476054 Msa0069230:intron 55.0%
TTTCCGAACGACGTAGGGGT+AGG + chr1_2:37476279-37476298 None:intergenic 55.0%
CGTAGTCTGCACTCTGCAGA+TGG + chr1_2:37478044-37478063 None:intergenic 55.0%
GTGTAGGATCGAGAGAGGCT+TGG - chr1_2:37478294-37478313 Msa0069230:intron 55.0%
CAGAGCAATGGTCTCGAAGG+AGG - chr1_2:37479623-37479642 Msa0069230:intron 55.0%
ACAGCGACAGAACAACCCGA+TGG + chr1_2:37479965-37479984 None:intergenic 55.0%
GGTTGTTCTGTCGCTGTCTG+AGG - chr1_2:37479968-37479987 Msa0069230:intron 55.0%
! TCGCTGTCTGAGGCTTACCT+GGG - chr1_2:37479978-37479997 Msa0069230:intron 55.0%
GTGCATCGAATATTGGGCCC+AGG + chr1_2:37479998-37480017 None:intergenic 55.0%
CGTACAAAGGGGAGTGACGG+AGG + chr1_2:37469511-37469530 None:intergenic 60.0%
GCCCGTACAAAGGGGAGTGA+CGG + chr1_2:37469514-37469533 None:intergenic 60.0%
CGTCGTTGTGGCCCGTACAA+AGG + chr1_2:37469524-37469543 None:intergenic 60.0%
CTTACTGGACGGCGTCGTTG+TGG + chr1_2:37469536-37469555 None:intergenic 60.0%
AGGCTCAGGCCAAGAAGGAG+TGG + chr1_2:37469755-37469774 None:intergenic 60.0%
CTCCTTCTTGGCCTGAGCCT+TGG - chr1_2:37469755-37469774 Msa0069230:CDS 60.0%
TGGCCTGAGCCTTGGTATCC+AGG - chr1_2:37469763-37469782 Msa0069230:CDS 60.0%
CAGTGCCAGACCCCATGTTG+TGG - chr1_2:37471038-37471057 Msa0069230:intron 60.0%
! GTCGATGGGGCTCTCCCTTT+TGG + chr1_2:37471969-37471988 None:intergenic 60.0%
GGAGAGCCCCATCGACATTG+TGG - chr1_2:37471973-37471992 Msa0069230:intron 60.0%
ACTGACCGCAGCAGAGGCAA+AGG + chr1_2:37472300-37472319 None:intergenic 60.0%
CCGAATACTGACCGCAGCAG+AGG + chr1_2:37472306-37472325 None:intergenic 60.0%
! GCGTCCTAATTTGCGGCACG+TGG - chr1_2:37473341-37473360 Msa0069230:intron 60.0%
! ATTTGCGGCACGTGGTGGTG+CGG - chr1_2:37473349-37473368 Msa0069230:intron 60.0%
AGCAGCCCCAACTGAGGAGA+TGG + chr1_2:37473482-37473501 None:intergenic 60.0%
GGAACTGGAACAGGCCTTGG+GGG - chr1_2:37474962-37474981 Msa0069230:intron 60.0%
CTGCCTACCCCTACGTCGTT+CGG - chr1_2:37476273-37476292 Msa0069230:intron 60.0%
! GTCGCTGTCTGAGGCTTACC+TGG - chr1_2:37479977-37479996 Msa0069230:intron 60.0%
TCACTCTCCGCCCATGGCGA+CGG - chr1_2:37469477-37469496 Msa0069230:three_prime_UTR 65.0%
! GGTGCTGTCACCGTCGCCAT+GGG + chr1_2:37469490-37469509 None:intergenic 65.0%
! AGGTGCTGTCACCGTCGCCA+TGG + chr1_2:37469491-37469510 None:intergenic 65.0%
GACCGCAGCAGAGGCAAAGG+AGG + chr1_2:37472297-37472316 None:intergenic 65.0%
! TTTGCGGCACGTGGTGGTGC+GGG - chr1_2:37473350-37473369 Msa0069230:intron 65.0%
GGAACAGGCCTTGGGGGAAG+TGG - chr1_2:37474968-37474987 Msa0069230:intron 65.0%
TAGGGGCGGGACCGCAATGA+AGG + chr1_2:37475244-37475263 None:intergenic 65.0%
GCTGTCACCGTCGCCATGGG+CGG + chr1_2:37469487-37469506 None:intergenic 70.0%
GGGCGGGACCGCAATGAAGG+CGG + chr1_2:37475241-37475260 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 37469216 37480561 37469216 ID=Msa0069230;Name=Msa0069230
chr1_2 mRNA 37469216 37480561 37469216 ID=Msa0069230-mRNA-1;Parent=Msa0069230;Name=Msa0069230-mRNA-1;_AED=0.12;_eAED=0.12;_QI=274|1|1|1|1|1|16|512|820
chr1_2 exon 37469216 37470171 37469216 ID=Msa0069230-mRNA-1:exon:11806;Parent=Msa0069230-mRNA-1
chr1_2 exon 37470789 37470939 37470789 ID=Msa0069230-mRNA-1:exon:11805;Parent=Msa0069230-mRNA-1
chr1_2 exon 37473029 37473099 37473029 ID=Msa0069230-mRNA-1:exon:11804;Parent=Msa0069230-mRNA-1
chr1_2 exon 37473434 37473546 37473434 ID=Msa0069230-mRNA-1:exon:11803;Parent=Msa0069230-mRNA-1
chr1_2 exon 37473721 37473814 37473721 ID=Msa0069230-mRNA-1:exon:11802;Parent=Msa0069230-mRNA-1
chr1_2 exon 37474749 37474814 37474749 ID=Msa0069230-mRNA-1:exon:11801;Parent=Msa0069230-mRNA-1
chr1_2 exon 37474977 37475139 37474977 ID=Msa0069230-mRNA-1:exon:11800;Parent=Msa0069230-mRNA-1
chr1_2 exon 37475230 37475336 37475230 ID=Msa0069230-mRNA-1:exon:11799;Parent=Msa0069230-mRNA-1
chr1_2 exon 37475779 37475967 37475779 ID=Msa0069230-mRNA-1:exon:11798;Parent=Msa0069230-mRNA-1
chr1_2 exon 37476161 37476286 37476161 ID=Msa0069230-mRNA-1:exon:11797;Parent=Msa0069230-mRNA-1
chr1_2 exon 37476382 37476486 37476382 ID=Msa0069230-mRNA-1:exon:11796;Parent=Msa0069230-mRNA-1
chr1_2 exon 37476604 37476747 37476604 ID=Msa0069230-mRNA-1:exon:11795;Parent=Msa0069230-mRNA-1
chr1_2 exon 37477065 37477117 37477065 ID=Msa0069230-mRNA-1:exon:11794;Parent=Msa0069230-mRNA-1
chr1_2 exon 37477325 37477490 37477325 ID=Msa0069230-mRNA-1:exon:11793;Parent=Msa0069230-mRNA-1
chr1_2 exon 37478700 37478875 37478700 ID=Msa0069230-mRNA-1:exon:11792;Parent=Msa0069230-mRNA-1
chr1_2 exon 37479993 37480561 37479993 ID=Msa0069230-mRNA-1:exon:11791;Parent=Msa0069230-mRNA-1
chr1_2 five_prime_UTR 37480288 37480561 37480288 ID=Msa0069230-mRNA-1:five_prime_utr;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37479993 37480287 37479993 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37478700 37478875 37478700 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37477325 37477490 37477325 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37477065 37477117 37477065 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37476604 37476747 37476604 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37476382 37476486 37476382 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37476161 37476286 37476161 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37475779 37475967 37475779 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37475230 37475336 37475230 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37474977 37475139 37474977 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37474749 37474814 37474749 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37473721 37473814 37473721 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37473434 37473546 37473434 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37473029 37473099 37473029 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37470789 37470939 37470789 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 CDS 37469728 37470171 37469728 ID=Msa0069230-mRNA-1:cds;Parent=Msa0069230-mRNA-1
chr1_2 three_prime_UTR 37469216 37469727 37469216 ID=Msa0069230-mRNA-1:three_prime_utr;Parent=Msa0069230-mRNA-1
Gene Sequence

>Msa0069230

ATGGCGACGGTGACAGCACCTCCGTCACTCCCCTTTGTACGGGCCACAACGACGCCGTCCAGTAAGAAGAAGAAGAAGAAGAATCATTCGAATTTCGGTCACTTTGGTCAAGTGGTTCGCAAGGACATGGAGTTTCTTAAAAGAGGATTTAACAATGGTGTTGAGTGGGCCAATGATGCATTCCGCATTCCTCAAATTGCCAAGAAAGTTGATGACTTTGTTTGGCTTCGAAATCTTGAAAACCCTCAAGCTACTTCGTTTTCCACTCCTTCTTGGCCTGAGCCTTGGTATCCAGGACTGTCTGGAGTGGATTTGCTCATGTATGATCTGAAGGCCTTGGAAGCATATGCTAGTTACTTCTATCATTTGTCTAAGATTTGGTCAAAGCCACTGCCTGAAACTTATGATCCTCAGGATGTCGCTCACTATTTCAGTGCCAGACCCCATGTTGTGGCTCTTCGTATGCTCGAGGTATTTTCCTCCTTTGCCTCTGCTGCGGTCAGTATTCGGACTTCAGGGTTAAGAAAATTTCTACCAATAAATGCAGAAGGGGATATGGACGATAAAACATCTGAATATAATTTTGGGTTGGTTTTAAAGGAAACAATGCTTAATCTTGGCCCCACATTTATAAAAGTTGGTCAGTCACTTTCCACGAGGCCAGATATCATTGGTGTTGAGATGTCCAAGGCATTGTCAGAATTGCATGATCAAATCCCTCCTTTTCCTAGGACTGTTGCTATGAAGATTCTTGAGGAAGAATTAGGAGCTCCCCTGGAATCATTTTTCAGCTACATTTCTGAGGAACCTGTAGCCGCTGCATCATTTGGTCAGGTTTACTTTGCCCGTACTATTGATGGTGTTAATGTTGCTGTAAAAGTTCAGCGTCCTAATTTGCGGCACGTGGTGGTGCGGGATATCTACATTCTTCGCCTTGGGTTGGGGCTGCTGCAAAAGATTGCCAAGAGAAAGAGTGACCCTCGCCTTTATGCTGATGAGCTTGGGCGAGGTTTTGTTGGTGAATTGGATTACACTTTAGAGGCAGCAAATGCATTGAAGTTTCGGGAAGTTCACTCGTCATTTTCTTTCATGCGCGTGCCAAAAATATTTTTACATTTAAGTCGAAAGAGAGTTCTGACCATGGAGTGGATGGTCGGTGAAAGTCCAACAGATTTAATCTCTGTATCTACCGGAAACTCTACTGAATATTCAGATAGGCAAAAAGTAGATGCAAAAAGGCGTCTACTTGATCTGGTCAATAAAGGTGTTGAAGCAACATTGGTTCAACTTCTTGAAACGGGCTTAATACACGCCGATCCACATCCTGGTAACTTGCGCTGCACTTCATCAGGAGAAATAGGGTTTTTGGATTTTGGTTTGCTCTGTCAAATGGAAAAAAGGCATCAATTCGCTATGCTGGCTTCAATAGTTCATATAGTAAACGGTGACTGGGCATATCTTGTCAACGCTCTGATTGATATGGATATGGTGAGACCAGGGACAAATATCCGGCTTGTTACCATGGAACTGGAACAGGCCTTGGGGGAAGTGGAATTTAAGGATGGAATTCCTGATGTGAAGTTCAGCAGGGTTCTGGGAAAGATTTTGTCTGTAGCATTCAAGTATCATTTCCGTATGCCAGCATATTATACACTTGTCTTACGATCCCTAGCCTCTTTCGAAGGTTTGGCTATAGCTGCAGATAAAAAATTCAAGACTTTTGAAGCTGCCTACCCCTACGTCGTTCGGAAACTTCTAACAGAAAACTCAGCCGCAACAAGGAAAATATTGCATTCGGTACTTCTAAATCGAAAGAAGGAGTTCCAATGGCAAAGGCTTTCCATGTTCTTGAGAGTAGGGGCAACTAGGAAAGGCTTGCAACTAGTAACTTCAAATAGTGAGACTTCCCCCGATCAATCACCAAATAAGGCCGCTGGTACATTTGATATTGCATACTTGATCTTGACGATTTTACCATCCAAAGATGGTGTCGCTTTGAGAAGGCTTCTCATGACTGCTGACGGAGCTTCAATAATCAGAGCAATGGTCTCGAAGGAGGGAAAGGTCATCCGCCAACAACTTTGCAAGGTCATAGCCGATGCATTGTGTCAATGGATGATTAAATTATGTGGACAAGGAGTCACAGATACTCAATATCCAAGGGTGATGTTGGCTAATGGAACTAGCAACAAAGAATCTGGTCGATCTACTCGATCATCTTCGCCTGCATATGATTATATTTCCTTATTTAGAGATCGGCGACTTCGGGTGATATTTTCTAAGGTTTTGAAATCTGCAAGCAGTCATAAAATACTGATGCTGCGGTTCTGTTGGTCTTCCCTTGTTATAATCATTACAGCTTCAGCTTTGGCAAGCCATCGGGTTGTTCTGTCGCTGTCTGAGGCTTACCTGGGCCCAATATTCGATGCACCTAAGCGTAAGAGATATGCAGTCAGTGCATGA
Protein sequence

>Msa0069230

MATVTAPPSLPFVRATTTPSSKKKKKKNHSNFGHFGQVVRKDMEFLKRGFNNGVEWANDAFRIPQIAKKVDDFVWLRNLENPQATSFSTPSWPEPWYPGLSGVDLLMYDLKALEAYASYFYHLSKIWSKPLPETYDPQDVAHYFSARPHVVALRMLEVFSSFASAAVSIRTSGLRKFLPINAEGDMDDKTSEYNFGLVLKETMLNLGPTFIKVGQSLSTRPDIIGVEMSKALSELHDQIPPFPRTVAMKILEEELGAPLESFFSYISEEPVAAASFGQVYFARTIDGVNVAVKVQRPNLRHVVVRDIYILRLGLGLLQKIAKRKSDPRLYADELGRGFVGELDYTLEAANALKFREVHSSFSFMRVPKIFLHLSRKRVLTMEWMVGESPTDLISVSTGNSTEYSDRQKVDAKRRLLDLVNKGVEATLVQLLETGLIHADPHPGNLRCTSSGEIGFLDFGLLCQMEKRHQFAMLASIVHIVNGDWAYLVNALIDMDMVRPGTNIRLVTMELEQALGEVEFKDGIPDVKFSRVLGKILSVAFKYHFRMPAYYTLVLRSLASFEGLAIAADKKFKTFEAAYPYVVRKLLTENSAATRKILHSVLLNRKKEFQWQRLSMFLRVGATRKGLQLVTSNSETSPDQSPNKAAGTFDIAYLILTILPSKDGVALRRLLMTADGASIIRAMVSKEGKVIRQQLCKVIADALCQWMIKLCGQGVTDTQYPRVMLANGTSNKESGRSTRSSSPAYDYISLFRDRRLRVIFSKVLKSASSHKILMLRFCWSSLVIIITASALASHRVVLSLSEAYLGPIFDAPKRKRYAVSA*